From 253d9a3de5163d420483317b89ad30772f894076 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Thu, 2 Apr 2026 18:42:49 +0200 Subject: [PATCH] gnu: r-bamsignals: Replace custom phase with SKIPPED-TESTS argument. * gnu/packages/bioconductor.scm (r-bamsignals)[arguments]: Remove phase 'disable-bad-tests; specify #:skipped-tests instead. Change-Id: Ifbb26ef31debc2ad43eb1265c7916b24bfa140ae --- gnu/packages/bioconductor.scm | 13 ++++--------- 1 file changed, 4 insertions(+), 9 deletions(-) diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 428788d735..e5d67fccab 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -8591,15 +8591,10 @@ classes.") (build-system r-build-system) (arguments (list - #:phases - '(modify-phases %standard-phases - (add-after 'unpack 'disable-bad-tests - (lambda _ - ;; Three attributes have no name. - (with-directory-excursion "tests/testthat" - (substitute* "test_CountSignals.R" - ((".*Test CountSignals class and methods.*" m) - (string-append m "skip('guix')\n"))))))))) + #:skipped-tests + '(("test_CountSignals.R" + ;; Three attributes have no name. + "Test CountSignals class and methods")))) (propagated-inputs (list r-biocgenerics r-genomicranges r-iranges r-rcpp r-rhtslib)) (native-inputs