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gnu: Add r-qfeatures.
* gnu/packages/bioconductor.scm (r-qfeatures): New variable.
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@@ -10416,6 +10416,41 @@ arrays (expression/SNP/tiling/exon) at probe-level. It currently supports
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Affymetrix (CEL files) and NimbleGen arrays (XYS files).")
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Affymetrix (CEL files) and NimbleGen arrays (XYS files).")
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(license license:lgpl2.0+)))
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(license license:lgpl2.0+)))
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(define-public r-qfeatures
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(package
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(name "r-qfeatures")
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(version "1.10.0")
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(source (origin
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(method url-fetch)
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(uri (bioconductor-uri "QFeatures" version))
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(sha256
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(base32
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"1xnmd14nf4cqbfxkjsl6af312k7l27ars5g8qdnljylkn8kq276z"))))
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(properties `((upstream-name . "QFeatures")))
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(build-system r-build-system)
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(propagated-inputs (list r-annotationfilter
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r-biobase
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r-biocgenerics
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r-igraph
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r-iranges
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r-lazyeval
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r-mscoreutils
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r-multiassayexperiment
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r-plotly
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r-protgenerics
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r-s4vectors
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r-summarizedexperiment))
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(native-inputs (list r-knitr))
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(home-page "https://github.com/RforMassSpectrometry/QFeatures")
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(synopsis "Quantitative features for mass spectrometry data")
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(description
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"The QFeatures infrastructure enables the management and processing of
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quantitative features for high-throughput mass spectrometry assays. It
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provides a familiar Bioconductor user experience to manages quantitative data
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across different assay levels (such as peptide spectrum matches, peptides and
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proteins) in a coherent and tractable format.")
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(license license:artistic2.0)))
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(define-public r-quantsmooth
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(define-public r-quantsmooth
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(package
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(package
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(name "r-quantsmooth")
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(name "r-quantsmooth")
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