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mirror of https://git.savannah.gnu.org/git/guix.git synced 2026-05-22 09:05:54 +02:00

gnu: python-metacells: Fix build.

* gnu/packages/bioinformatics.scm (python-metacells): Fix build.
[arguments]<#:phases>: Add pre-sanity-check phase.
[homepage]: Update with redirect.

Change-Id: I9e6c2dfd4d944a589f87716ab8347a161ff630c5
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
This commit is contained in:
Hugo Buddelmeijer
2026-03-16 22:43:32 +01:00
committed by Sharlatan Hellseher
parent d840bb1863
commit 81cb51f3b7
+6 -2
View File
@@ -3241,7 +3241,11 @@ and gene expression visualization.")
(lambda _
;; Numba needs a writable dir to cache functions.
(setenv "NUMBA_CACHE_DIR" "/tmp")
(delete-file-recursively "metacells"))))))
(delete-file-recursively "metacells")))
(add-before 'sanity-check 'pre-sanity-check
(lambda _
;; Numba needs a writable dir to cache functions.
(setenv "NUMBA_CACHE_DIR" "/tmp"))))))
(propagated-inputs (list python-anndata
python-cvxpy
python-fastcluster
@@ -3255,7 +3259,7 @@ and gene expression visualization.")
python-threadpoolctl
python-umap-learn))
(native-inputs (list pybind11-2 python-pytest python-setuptools))
(home-page "https://github.com/tanaylab/metacells.git")
(home-page "https://github.com/tanaylab/metacells")
(synopsis "Single-cell RNA Sequencing Analysis")
(description "The metacells package implements the improved metacell
algorithm for single-cell RNA sequencing (scRNA-seq) data analysis within the