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gnu: Add rscape.

* gnu/packages/bioinformatics.scm (rscape): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
This commit is contained in:
Navid Afkhami
2023-06-23 17:43:54 +00:00
committed by Ricardo Wurmus
parent 06d8000591
commit 94ac93042f
+24
View File
@@ -17253,6 +17253,30 @@ information... The package can also be used to extract data from @code{.loom}
files.")
(license license:expat))))
(define-public rscape
(package
(name "rscape")
(version "2.0.0.q")
(source (origin
(method url-fetch)
(uri (string-append "http://eddylab.org/software/rscape/"
"rscape_v" version ".tar.gz"))
(sha256
(base32
"1jabvm3fzh8iy4803ns12v1fsy28x6wdy8wx4ik8y0mfac4h787q"))))
(build-system gnu-build-system)
(propagated-inputs (list gsl openmpi))
(native-inputs (list automake autoconf))
(home-page "https://github.com/EddyRivasLab/R-scape")
(synopsis "RNA structural covariation above phylogenetic expectation")
(description
"R-scape discovers RNA secondary structure consensus elements.
These elements include riboswitches and ribozymes. It utilizes probabilistic
modeling of sequence alignments, explicitly considering folding dependencies.
The tool enables the de novo search for new structural elements and
facilitates comparative analysis of known RNA families.")
(license license:bsd-3)))
(define-public r-seurat-utils
(let ((commit "0b6f5b548a49148cfbeaa654e8a618c0a020afa5")
(revision "1"))