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gnu: Add r-tximportdata.

* gnu/packages/bioconductor.scm (r-tximportdata): New variable.
This commit is contained in:
Mădălin Ionel Patrașcu
2022-10-14 13:12:16 +02:00
committed by Ricardo Wurmus
parent f180a5990b
commit 9f8ab16fb5
+24
View File
@@ -1628,6 +1628,30 @@ cultures from 4 patients at 2 time points over 3 conditions (DPN, OHT and contro
TCGAbiolinksGUI package.")
(license license:gpl3)))
(define-public r-tximportdata
(package
(name "r-tximportdata")
(version "1.24.0")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "tximportData" version
'experiment))
(sha256
(base32
"0mgbwpybg2xd6x1ijrflmjh5w63qz6ylnzszbbyp437n618m7riy"))))
(properties `((upstream-name . "tximportData")))
(build-system r-build-system)
(native-inputs (list r-knitr))
(home-page "https://bioconductor.org/packages/tximportData")
(synopsis "Data for the tximport package")
(description
"This package provides the output of running various transcript abundance
quantifiers on a set of 6 RNA-seq samples from the GEUVADIS project. The
quantifiers were @code{Cufflinks}, @code{RSEM}, @code{kallisto}, @code{Salmon}
and @code{Sailfish}. Alevin example output is also included.")
(license license:gpl2+)))
;;; Packages