From e73d1c1929b812f365891dfbab1ddd6bf7f4847c Mon Sep 17 00:00:00 2001
From: Ricardo Wurmus <rekado@elephly.net>
Date: Tue, 25 Nov 2025 13:33:22 +0100
Subject: [PATCH] gnu: r-dmrcate: Update to 3.6.0.

* gnu/packages/bioconductor.scm (r-dmrcate): Update to 3.6.0.
[propagated-inputs]: Remove r-genomeinfodb; add r-seqinfo.
[native-inputs]: Add r-genomeinfodb.

Change-Id: I07b962b9ecec6be2291b9975d0d35d8c6fcb34fe
---
 gnu/packages/bioconductor.scm | 8 ++++----
 1 file changed, 4 insertions(+), 4 deletions(-)

diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index add59d43332..a93cb99f6bb 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -7270,13 +7270,13 @@ calculation in parallel.")
 (define-public r-dmrcate
   (package
     (name "r-dmrcate")
-    (version "3.4.0")
+    (version "3.6.0")
     (source (origin
               (method url-fetch)
               (uri (bioconductor-uri "DMRcate" version))
               (sha256
                (base32
-                "1q6z83v9s1rm0rllda8qpln876mif5v9jqjw7x8dqb561q9plg7p"))))
+                "04hvb65i267365qgjmqbd2lbk5fxnn4r5vd37ncvbq0gn71qax7c"))))
     (properties `((upstream-name . "DMRcate")))
     (build-system r-build-system)
     (propagated-inputs
@@ -7285,7 +7285,6 @@ calculation in parallel.")
            r-bsseq
            r-edger
            r-experimenthub
-           r-genomeinfodb
            r-genomicranges
            r-gviz
            r-iranges
@@ -7294,8 +7293,9 @@ calculation in parallel.")
            r-missmethyl
            r-plyr
            r-s4vectors
+           r-seqinfo
            r-summarizedexperiment))
-    (native-inputs (list r-knitr))
+    (native-inputs (list r-genomeinfodb r-knitr))
     (home-page "https://bioconductor.org/packages/DMRcate")
     (synopsis "Methylation array and sequencing spatial analysis methods")
     (description