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879 Commits

Author SHA1 Message Date
Ayan Das
9919afc965 gnu: python-pytorch-lightning: Update to 2.6.0. 
* gnu/packages/machine-learning.scm (python-pytorch-lightning): Update to 2.6.0.
  [source]: Update hash.
  [arguments]: Fix LeafSpec deprecation with PyTorch 2.10.

Change-Id: I7db724fd269e6b171293c3d2258440f01d2ea2b6
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2026-02-22 18:41:11 +01:00
Ayan Das
cb5934e85e gnu: python-botorch: Fix tests with PyTorch 2.10. 
* gnu/packages/machine-learning.scm (python-botorch): Substitute out
an invalid call to `view\' that passes a torch.Size plus extra arguments,
which PyTorch 2.10 rejects.

Change-Id: I71a47dab611ad33c3f765c74093aeadabc9f4c8d
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2026-02-22 18:41:11 +01:00
Ayan Das
3cdb9a09c1 gnu: python-torchvision: Update to 0.25.0. 
* gnu/packages/machine-learning.scm (python-torchvision): Update to 0.25.0.
  [source]: Update hash.

Change-Id: I01b88a7f771e1cd5a29b85fe69393cb94a61a37d
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2026-02-22 18:41:10 +01:00
Ayan Das
e1cfe62f11 gnu: python-torchaudio: Update to 2.10.0. 
* gnu/packages/machine-learning.scm (python-torchaudio): Update to 2.10.0.
  [source]: Update hash.
  [arguments]: Skip dataset tests requiring torchcodec.

Change-Id: I8da137fac0f4419bec78d1d0f41c98b4fcf84362
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2026-02-22 18:41:10 +01:00
Ayan Das
52b5ef81a1 gnu: python-pytorch: Update to 2.10.0. 
* gnu/packages/machine-learning.scm (%python-pytorch-version): Update to 2.10.0.
(%python-pytorch-src)[source]: Update hash.
(python-pytorch)[arguments]: Fix build by including Utils.hpp.
* gnu/packages/patches/python-pytorch-runpath.patch: Update for 2.10.0.
* gnu/packages/patches/python-pytorch-system-libraries.patch: Update for 2.10.0.

Change-Id: Ic579058f302d2d8face536ae9980f06854888615
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2026-02-22 18:41:10 +01:00
Ayan Das
5895cb7558 gnu: ideep-pytorch: Update to 3.7.1. 
* gnu/packages/machine-learning.scm (ideep-pytorch): Update to 3.7.1.
  [source]: Update hash.

Change-Id: Ib775087c6d7f94f33b5bae1c869d33fc848f2cd3
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2026-02-22 18:41:10 +01:00
Nguyễn Gia Phong
72accc0345 gnu: Add argos-translate-gui. 
* gnu/packages/machine-learning.scm (argos-translate-gui):
  New variable.

Change-Id: Ic9ed903e34f1b34a51e1c8d2757d4dc60473ef46
 2026-02-21 19:29:58 +01:00
Nguyễn Gia Phong
2337dc4930 gnu: python-argostranslate: Disable spaCy download. 
The spaCy model Argos Translate tries to download, xx-sent-ud-sm,
is already a propagated input.

* gnu/packages/machine-learning.scm(python-argostranslate)[arguments]
<#:phases>: Add 'disable-spacy-download.

Change-Id: Ifd0e9e1b4bae5255c28c9c4d3726d9c5360ee4b9
 2026-02-21 19:29:58 +01:00
Dariqq
3e9338b923 gnu: Use (target-32bit?) to test for 32bit targets. 
* gnu/packages/*.scm: Replace usage of target-64bit? when actually testing for
32bit targets.
* guix/utils.scm (target-hurd32?). Same.

Change-Id: If3ed2b82a1229b72b07fafc694eedc14080e5a04
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
Merges: #5710
 2026-02-20 22:34:56 +01:00
Andreas Enge
1797f72918 gnu: Remove ghmm. 
* gnu/packages/machine-learning.scm (ghmm): Delete variable.

Fixes: guix/guix#5664
Change-Id: I144b4c8f23b2edc7ba8efb19739fdfde1e9e65f6
 2026-02-17 12:24:23 +01:00
Nicolas Graves
a7c475b6a7 gnu: python-hyperopt: Fix tests. 
* gnu/packages/machine-learning.scm (python-hyperopt)[arguments]
<#:test-flags>: Don't run slow tests.
<#:phases>: Add phase 'patch-tests.

Change-Id: I1fa9a0968291ea9ef7c75dd3ab7d19edc14279b2
Reviewed-by: Hugo Buddelmeijer <hugo@buddelmeijer.nl>
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2026-02-15 21:50:04 +00:00
Cayetano Santos
5af99e153d gnu: llama-cpp: Unbundle ggml. 
* gnu/packages/machine-learning.scm (llama-cpp)[inputs]: Add ggml.
[arguments]<#:configure-flags>: Set accordingly.

Change-Id: I30299ccab727f5a242eeb5437cb4b7e581e2b47d
 2026-02-11 08:14:51 +01:00
Cayetano Santos
02dba5ab3e gnu: Add ggml. 
* gnu/packages/machine-learning.scm (ggml): New variable.

Merges guix/guix!6238

Change-Id: Iebfff1cd9587a3ba3bb02020533c658b6c21f614
 2026-02-11 08:10:15 +01:00
Andy Tai
ff3813891a gnu: llama-cpp: Update to b7966. 
* gnu/packages/machine-learning.scm (llama-cpp): Update to b7966.
[inputs]: Add openssl.
[native-inputs]: Add python-minimal-wrapper.
[arguments]<#:phases>: Update ’fix-tests.

Merges guix/guix!6227

Change-Id: I756e3e28a6b5d0fdc64349260806305619bbcc30
Signed-off-by: Cayetano Santos <csantosb@inventati.org>
 2026-02-11 08:09:03 +01:00
David Elsing
eb541097d1 gnu: Add frugally-deep. 
* gnu/packages/machine-learning.scm (frugally-deep): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2026-02-10 23:49:15 +01:00
Sharlatan Hellseher
e012430a92 gnu: python-argostranslate: Fix build. 
* gnu/packages/machine-learning.scm (python-argostranslate)
  [phases]{writable-home}: Remove phase.
  {set-home-env}: New phase, located before {build}.

Relates-to: guix/guix#5892
Change-Id: I04fdb2fa6793d3e3e1da906612f4b650238f2b1d
 2026-02-07 12:28:58 +01:00
Sharlatan Hellseher
f815f0796f gnu: python-meson-python: Rename to python-meson. 
This change adjusts the package name to follow Guix naming convention
for Python packages, see:
<https://codeberg.org/guix/guix/issues/5917#issuecomment-10168830>.

* gnu/packages/python-xyz.scm (python-meson): New variable.
(python-meson-python): Deprecate variable.

* gnu/packages/algebra.scm (python-flint):
* gnu/packages/astronomy.scm (python-pixell)
* gnu/packages/finance.scm (beancount)
* gnu/packages/game-development.scm (python-pygame-ce)
* gnu/packages/machine-learning.scm (python-scikit-learn)
* gnu/packages/python-science.scm (python-pandas, python-scikit-image,
python-scikit-misc, python-scipy, python-scs)
* gnu/packages/python-xyz.scm (python-contourpy, python-cysignals,
python-dbus-python, python-matplotlib, python-numpy, python-numpy-1,
python-pywavelets, python-siphash24)
[native-inputs]: Remove python-meson-python; add python-meson.

Fixes: guix/guix#5917
Change-Id: I0a9d53a164e542831fb5c3292ba71583f30d3b74
 2026-02-07 12:28:44 +01:00
Sharlatan Hellseher
6f7f9d6c68 gnu: python-scikit-learn: Adjust native inputs. 
* gnu/packages/machine-learning.scm (python-scikit-learn):
[native-inputs]: Remove meson-python, pkg-config, and python-cython; add
python-meson-python.

Change-Id: Ib0ad4db1382d748e3ecbab9c50f9446c345048dc
 2026-02-07 12:28:43 +01:00
Sharlatan Hellseher
d1ff238ffb gnu: python-umap-learn: Update to 0.5.11. 
* gnu/packages/machine-learning.scm (python-umap-learn): Update to 0.5.11.
[phases]{set-numa-cache-dir}: Move before {build}, see:
<https://codeberg.org/guix/guix/issues/5892>.
[native-inputs]: Remove python-wheel.

Change-Id: Ia05d93991f3fa9baced3a92260cfc111b91f7400
 2026-02-07 12:28:41 +01:00
Sharlatan Hellseher
c2f52bf0be gnu: python-scikit-learn: Fix build. 
* gnu/packages/machine-learning.scm (python-scikit-learn):
[phases]{patch-pyproject}: Remove license modification line.

Change-Id: I19585e113e8f32c506841afbdfbc957ad44539da
 2026-02-07 12:28:41 +01:00
Sharlatan Hellseher
447a74cedd gnu: python-tornado: Update to 6.4.2. 
* gnu/packages/python-web.scm (python-tornado): Absorb definition of
python-tornado-6.
(python-tornado-5): New variable, inherit from python-tornado.
(python-tornado-6): Deprecate variable.

* gnu/packages/jupyter.scm (python-jupyterlite-core)
* gnu/packages/jupyter.scm (python-pytest-jupyter)
* gnu/packages/jupyter.scm (python-voila)
* gnu/packages/python-xyz.scm (python-pypugjs)
* gnu/packages/python-xyz.scm (python-tenacity):
[native-inputs]: Remove python-tornado-6; add python-tornado.

* gnu/packages/machine-learning.scm (kaldi-gstreamer-server):
[inputs]: Remove python-tornado-6; add python-tornado.

* gnu/packages/bioinformatics.scm (python-bulkvis)
* gnu/packages/jupyter.scm (python-ipykernel)
* gnu/packages/jupyter.scm (python-jupyter-client)
* gnu/packages/jupyter.scm (python-jupyter-client-7)
* gnu/packages/jupyter.scm (python-jupyter-server)
* gnu/packages/jupyter.scm (python-nbclassic)
* gnu/packages/jupyter.scm (python-nbdime)
* gnu/packages/jupyter.scm (python-notebook)
* gnu/packages/jupyter.scm (python-terminado)
* gnu/packages/python-check.scm (python-pytest-tornasync)
* gnu/packages/python-science.scm (python-distributed)
* gnu/packages/python-xyz.scm (python-bokeh)
* gnu/packages/python-xyz.scm (python-ipyparallel-bootstrap)
* gnu/packages/python-xyz.scm (python-nbconvert)
[propagated-inputs]: Remove python-tornado-6; add python-tornado.

Change-Id: I437d73a0711c88e329666b6bc853f6332c277098
 2026-02-07 12:28:38 +01:00
Nicolas Graves
1bf91ac505 gnu: Drop setting SETUPTOOLS_SCM_PRETEND_VERSION in some packages. 
* gnu/packages/astronomy.scm (python-asdf-compression)
(python-asdf-fits-schemas, python-cdflib, python-sunkit-spex):
* gnu/packages/bioinformatics.scm (python-whatshap, python-mudata)
(python-pyfaidx, python-ctxcore, scvelo):
* gnu/packages/bootloaders.scm (dtc):
* gnu/packages/check.scm (python-pytest-xdist, python-pytest-forked):
* gnu/packages/databases.scm (python-fastparquet):
* gnu/packages/disk.scm (greaseweazle-host-tools):
* gnu/packages/docker.scm (python-docker):
* gnu/packages/finance.scm (python-ledgerblue):
* gnu/packages/fontutils.scm (python-compreffor)
(python-defcon-bootstrap, nototools):
* gnu/packages/games.scm (sc-controller):
* gnu/packages/machine-learning.scm (python-botorch):
* gnu/packages/music.scm (python-pylast):
* gnu/packages/package-management.scm (conda):
* gnu/packages/python-build.scm (python-exceptiongroup):
* gnu/packages/python-science.scm (python-dask-image)
(python-distributed, python-osqp):
* gnu/packages/python-web.scm (python-branca, python-smart-open):
* gnu/packages/python-xyz.scm (python-conda-content-trust)
(python-menuinst, python-isort, python-pyclibrary)
(python-pyclipper, python-csb43-0.10, python-orgparse)
(python-deepmerge, python-scooby, python-uuid6):
* gnu/packages/radio.scm (nanovna-saver):
* gnu/packages/sphinx.scm (python-sphinx-autodoc-typehints):
[arguments]: Remove phases setting SETUPTOOLS_SCM_PRETEND_VERSION.

* gnu/packages/python-xyz.scm (python-bagit)
[arguments]: Refactor manual 'check phase into #:test-flags.

Change-Id: I0713d6603f982a7f956d02fc3b85a384f4dd6ce4
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2026-02-07 12:28:37 +01:00
Nicolas Graves
77e1781ffe gnu: Remove python-importlib-metadata input from some packages. 
Remove python-importlib-metadata from [native-inputs, inputs, or
propagated-inputs] in the following packages as not required for
build/tests/install:

* gnu/packages/android.scm (python-miio)
* gnu/packages/astronomy.scm (python-jwst, python-stpipe)
* gnu/packages/bioinformatics.scm (python-demuxem, python-hotspotsc,
python-weblogo, python-metacells)
* gnu/packages/calendar.scm (khal)
* gnu/packages/django.scm (python-django-q2)
* gnu/packages/engineering.scm (python-asyncua)
* gnu/packages/jupyter.scm (python-jupyterlab-server,
python-jupyterlite-core)
* gnu/packages/machine-learning.scm (python-pynndescent,
python-gymnasium)
* gnu/packages/maths.scm (python-orthopy, python-quadpy)
* gnu/packages/package-management.scm (poetry)
* gnu/packages/python-compression.scm (python-pybcj)
* gnu/packages/python-crypto.scm (python-keyring)
* gnu/packages/python-web.scm (python-jsonpickle, python-flask)
* gnu/packages/python-xyz.scm (python-jsonschema-3, python-pystitcher,
python-lsp-server, python-nbconvert, python-dns-lexicon,
python-signedjson, python-verlib2)
* gnu/packages/sphinx.scm (python-sphinx-6)
* gnu/packages/spreadsheet.scm (visidata)

Change-Id: Ifac8350aa60528dc2ccacf2570120dbcf1c74ab8
Modified-by: Sharlatan Hellseher <sharlatanus@gmail.com>
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2026-02-07 12:28:36 +01:00
Nicolas Graves
b6627e81a4 gnu: python-pymanopt: Remove python-flake8-bugbear native-input. 
* gnu/packages/machine-learning.scm (python-pymanopt)[native-input]:
Remove python-flake8-bugbear.

Change-Id: Ib3eca8ce7dabb2ef9da4db0ca9eeeb94308f4805
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2026-02-07 12:28:36 +01:00
Nicolas Graves
cd0a53d17f gnu: Remove python-isort native-input from some packages. 
Remove python-isort from [native-inputs] in the following packages as
not required for build/tests/install:

* gnu/packages/machine-learning.scm: (python-pymanopt))
* gnu/packages/mail.scm: (python-hyperkitty, postorius)
* gnu/packages/virtualization.scm: (python-qemu-qmp)

Change-Id: Ie50eb222c5db62cf985926c716152db8bf6e7855
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2026-02-07 12:28:36 +01:00
Nicolas Graves
a63620b659 gnu: Remove python-mypy native-input from some packages. 
Remove python-mypy from [native-inputs] in the following packages as not
required for build/tests/install:

* gnu/packages/engineering.scm: (uranium, cura)
* gnu/packages/machine-learning.scm: (python-torchmetrics)
* gnu/packages/python-check.scm: (python-nptyping)
* gnu/packages/python-web.scm: (python-huggingface-hub, python-asgiref,
python-starsessions)
* gnu/packages/python-xyz.scm: (kalamine, python-numpy-1)
* gnu/packages/serialization.scm: (python-msgspec)

Change-Id: I46d608020f65a2d6a8d3fec792173e44308360bd
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2026-02-07 12:28:36 +01:00
Nicolas Graves
fbaf9c22a0 gnu: Remove python-coverage native-input from some packages. 
Remove python-coverage from [native-inputs] in the following packages as
not required for build/tests/install:

* gnu/packages/check.scm: (python-pytest-flakes)
* gnu/packages/cpp.scm: (cpplint)
* gnu/packages/jupyter.scm: (python-nbclassic)
* gnu/packages/machine-learning.scm (onnx,
python-pytorch-lightning) (python-torchmetrics)
* gnu/packages/openstack.scm: (python-hacking)
* gnu/packages/python-xyz.scm: (python-lsp-jsonrpc, python-nodeenv)
* gnu/packages/simulation.scm: (python-dolfin-adjoint)
* gnu/packages/version-control.scm: (pre-commit)

Change-Id: I2c5e14f4aa28906ceee054c857e6abeeb122ad52
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2026-02-07 12:28:35 +01:00
Nicolas Graves
015bc199ef gnu: Remove python-flake8 native-input from some packages. 
Remove python-flake8 from [native-inputs] in the following packages as
not required for build/tests/install:

* gnu/packages/bioinformatics.scm: (python-doubletdetection)
* gnu/packages/ebook.scm: (calibre)
* gnu/packages/graph.scm: (python-pygsp)
* gnu/packages/machine-learning.scm: (python-pymanopt, python-pyro-api)
* gnu/packages/python-web.scm: (python-furl)
* gnu/packages/python-xyz.scm: (python-jinja2-cli)
* gnu/packages/simulation.scm: (python-dolfin-adjoint)
* gnu/packages/vpn.scm: (sshuttle)

* gnu/packages/music.scm (python-mutagen):
  [arguments]<#:test-flags>: Ignore flake8 quality tests.
  [native-inputs]: Remove python-flake8.

Change-Id: I2789b8711faf3aa60a4bfa2062f95616e216d6c3
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2026-02-07 12:28:35 +01:00
Sharlatan Hellseher
8990cfda50 gnu: python-readchar: Use python-pytest-8. 
* gnu/packages/machine-learning.scm (python-readchar)[native-inputs]:
Remove python-pytest; add python-pytest-8.

Change-Id: I4a879d7d6e591e3c3e0971c93b257cf763a07f41
 2026-02-07 12:28:20 +01:00
Nicolas Graves
93b40d330f build-system/pyproject: Remove uneeded use of pyproject-guile-json. 
* gnu/packages/bioinformatics.scm (python-bed-reader, python-gseapy)
* gnu/packages/chemistry.scm (gemmi, ringdecomposerlib, rdkit)
* gnu/packages/cinnamon.scm (libxapp)
* gnu/packages/cups.scm (hplip)
* gnu/packages/djvu.scm (ocrodjvu)
* gnu/packages/finance.scm (electron-cash)
* gnu/packages/gnome.scm (terminator)
* gnu/packages/image-processing.scm (insight-toolkit)
* gnu/packages/machine-learning.scm (onnxruntime, tensorflow-lite,
koboldcpp, python-tokenizers)
* gnu/packages/maths.scm (gmsh, z3, fp16)
* gnu/packages/music.scm (quodlibet)
* gnu/packages/photo.scm (lensfun)
* gnu/packages/python-science.scm (python-clarabel)
* gnu/packages/python-xyz.scm (python-orjson, python-libcst,
python-rpds-py, python-streamtracer, python-tiktoken)
* gnu/packages/rpm.scm (createrepo-c)
* gnu/packages/rust-apps.scm (maturin)
* gnu/packages/sugar.scm (sugar, sugar-datastore)
* gnu/packages/version-control.scm (mercurial, hg-commitsigs)
* gnu/packages/vpn.scm (python-proton-vpn-local-agent)
[arguments]<#:phases>: Remove uneeded use of pyproject-guile-json
extension.

* gnu/packages/python-xyz.scm (python-streamtracer)[arguments]
<#:phases>: Also rewrite 'check phase replacement.

Change-Id: I779c354120ada3d94f07a127b9ec5011e73254c2
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2026-02-07 12:28:18 +01:00
Ricardo Wurmus
2e944d8948 gnu: Add python-burr. 
* gnu/packages/machine-learning.scm (python-burr): New variable.

Change-Id: Iae8cb383ae1528abc96f961e4a9d1436b913d61a
 2026-02-03 22:53:40 +01:00
Cayetano Santos
7ab990a50a gnu: koboldcpp: Update to 1.107. 
* gnu/packages/machine-learning.scm (koboldcpp): Update to 1.107.
[source]: Add snippet.

Change-Id: I7582cc557ddf203866981b7876c9cd77927db6c5
 2026-01-31 22:04:29 +01:00
Nguyễn Gia Phong
819310310b gnu: Add python-argostranslate. 
* gnu/packages/machine-learning.scm (python-argostranslate):
  New variable.

Merges guix/guix!5564

Co-Authored-By: Lapearldot <lapearldot@disroot.org>
Change-Id: I59b5159b19cfea97cc4aa83a8ffb482066cc2b01
Signed-off-by: Cayetano Santos <csantosb@inventati.org>
 2026-01-31 09:58:46 +01:00
Nguyễn Gia Phong
f004a0629e gnu: Add python-xx-sent-ud-sm. 
* gnu/packages/machine-learning.scm (python-xx-sent-ud-sm): New variable.

Change-Id: I2fc16a03871752bc7a571ad317a6747a419f7f68
 2026-01-31 09:54:48 +01:00
Nguyễn Gia Phong
a2f5c702f1 gnu: Add python-stanza. 
* gnu/packages/machine-learning.scm (python-stanza): New variable.

Change-Id: I86369771db647c85d7a204ff8069d6e3670bb58b
 2026-01-31 09:54:48 +01:00
Cayetano Santos
45469682c8 gnu: python-botorch: Update to 0.16.1. 
* gnu/packages/machine-learning.scm (python-botorch): Update to 0.16.1.

Merges guix/guix!5935

Change-Id: I6d2d9d3b3071a7974a41020c2f42b4547cc92fcf
 2026-01-28 14:16:43 +01:00
Cayetano Santos
e1890ff86f gnu: python-gpytorch: Update to 1.15.1. 
* gnu/packages/machine-learning.scm (python-gpytorch): Update to 1.15.1.

Merges guix/guix!5935

Change-Id: I1b2d4b8937f74143910ba281f7496d4b1c10b81c
 2026-01-28 14:16:35 +01:00
Cayetano Santos
f5dd93caf3 gnu: python-pynndescent: Update to 0.6.0. 
* gnu/packages/machine-learning.scm (python-pynndescent): Update to 0.6.0.
[native-inputs]: Remove python-wheel.

Merges guix/guix!5935

Change-Id: Ib9dcb82bede9d2806c0e44c8b39c428aaac97804
 2026-01-28 14:16:09 +01:00
Andy Tai
b989e0138e gnu: koboldcpp: Update to 1.106.2. 
* gnu/packages/machine-learning.scm (koboldcpp): Update to 1.106.2.

Merges guix/guix!5888

Change-Id: Id9f840c4195c7c5b8616f5053229886dec11f18f
Signed-off-by: Rutherther <rutherther@ditigal.xyz>
 2026-01-25 21:31:40 +01:00
Cayetano Santos
c118224197 gnu: Remove oneapi-dnnl. 
Replaced by onednn in (gnu packages oneapi).

* gnu/packages/oneapi.scm (oneapi-dnnl): Define as the deprecated
version of onednn.
* gnu/packages/machine-learning.scm (oneapi-dnnl): Delete variable.
* gnu/packages/machine-learning.scm (python-pytorch)[native-inputs]:
Remove oneapi-dnnl; add onednn.
* gnu/packages/machine-learning.scm (python-torchaudio)[native-inputs]:
Remove oneapi-dnnl; add onednn.

Merges guix/guix!5527

Change-Id: Ied9ff943607423c46963ddd55b78c687f5561f64
Signed-off-by: Rutherther <rutherther@ditigal.xyz>
 2026-01-25 21:30:52 +01:00
Cayetano Santos
5610c76d04 gnu: ctranslate2: Update to 4.6.3. 
* gnu/packages/machine-learning.scm (ctranslate2): Update to 4.6.3.
[native-inputs]: Remove oneapi-dnnl; add onednn.

Merges guix/guix!5527

Change-Id: I63d52e28bdcc1566420a0d63d4fe291094924018
Signed-off-by: Rutherther <rutherther@ditigal.xyz>
 2026-01-25 21:30:52 +01:00
Cayetano Santos
b2900166d6 gnu: python-cleanlab: Update to 2.9.0. 
* gnu/packages/machine-learning.scm (python-cleanlab): Update to 2.9.0.
[arguments]: Use G-Expressions; remove ’relax-requirements #:phase.

Change-Id: Icf1bfe7cfb902acbf1bb28ef0e13e68cad45fd45
Signed-off-by: Rutherther <rutherther@ditigal.xyz>
 2026-01-25 21:25:54 +01:00
Andreas Enge
4e1e5a5f77 gnu: python-ctranslate2: Update input. 
* gnu/packages/machine-learning.scm (python-ctranslate2)[native-inputs]:
Replace pybind11-2.10 by pybind11.

Change-Id: Iad4be3ee01e82226f25e9bf085c599bcac357bfa
Signed-off-by: Rutherther <rutherther@ditigal.xyz>
 2026-01-25 21:25:33 +01:00
Andreas Enge
22a001c577 gnu: Remove python-cleanlab-1. 
* gnu/packages/machine-learning.scm (python-cleanlab-1): Delete variable.

Fixes: guix/guix#4839
Change-Id: I38061610e4ffe3d09008b5b8d30e75baeab8cc01
Signed-off-by: Rutherther <rutherther@ditigal.xyz>
 2026-01-25 21:25:27 +01:00
Sharlatan Hellseher
b95afcbdd8 gnu: python-brian2tools: Switch to pyproject. 
* gnu/packages/machine-learning.scm (python-brian2tools):
[build-system]: Switch to pyproject-build-system.
[propagated-inputs]: Remove python-setuptools and python-setuptools-scm.
[native-inputs]: Remove python-pytest; add python-setuptools,
python-setuptools-scm.

Change-Id: Idfa91dcf22f79aba09ce2191ac89f0e2772dfbf5
Signed-off-by: Rutherther <rutherther@ditigal.xyz>
 2026-01-25 21:24:04 +01:00
Nicolas Graves
4347565cb8 gnu: python-pytorch: Switch to pyproject. 
* gnu/packages/machine-learning.scm (python-pytorch):
[build-system]: Switch to pyproject-build-system.
[arguments]<#:tests?>: Relocate field.
<#:phases>: Add a fix in phase 'use-system-libraries.

Change-Id: I780c1be6d9f1d3359a35a16686d3dd45b3b940f3
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
Signed-off-by: Rutherther <rutherther@ditigal.xyz>
 2026-01-25 21:24:02 +01:00
Cayetano Santos
952213a987 gnu: python-brian2tools: Fix build. 
* gnu/packages/machine-learning.scm (python-brian2tools): Add missing input.
[propagated-inputs]: Add python-tables.

Change-Id: I974d3a4e1101272710e791ab92b9bc793d17f28e
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
Signed-off-by: Rutherther <rutherther@ditigal.xyz>
 2026-01-25 21:23:16 +01:00
Sharlatan Hellseher
b0d9ec0e8b gnu: openmm: Remove shaky tests. 
The package could not finish build in CI because of some not
deterministic tests, see:
<https://ci.guix.gnu.org/build/16867177/details>. This change removes
some of them.

* gnu/packages/machine-learning.scm (openmm):
[phases]{remove-shaky-tests}: New phase.

Change-Id: I508b23db8b6f0d5a567561b190897bc90cb8faf3
Signed-off-by: Rutherther <rutherther@ditigal.xyz>
 2026-01-25 21:22:18 +01:00
Sharlatan Hellseher
716fe2f4da gnu: python-pot: Update to 0.9.6.post1. 
* gnu/packages/machine-learning.scm (python-pot): Update to 0.9.6.post1.
[arguments]: Drop all.
[propagated-inputs]: Add python-cvxopt and python-matplotlib.
[native-inputs]: Remove python-pytest-cov.

Change-Id: I763bf521a30f1bd4067089133421239af160173c
Signed-off-by: Rutherther <rutherther@ditigal.xyz>
 2026-01-25 21:22:13 +01:00
Sharlatan Hellseher
14cc5cf42f gnu: openmm: Update to 8.4.0. 
* gnu/packages/machine-learning.scm (openmm): Update to 8.4.0.

Change-Id: If91f5557966b7982b3504800d7761cc9b79b3af2
Signed-off-by: Rutherther <rutherther@ditigal.xyz>
 2026-01-25 21:22:08 +01:00