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015ff0bf1810de8b0ea6ed911908420f58dbdd16
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55282 Commits

Author SHA1 Message Date
Ricardo Wurmus
015ff0bf18 gnu: r-wiggleplotr: Update to 1.12.1. 
* gnu/packages/bioconductor.scm (r-wiggleplotr): Update to 1.12.1.
 2020-06-22 12:15:49 +02:00
Ricardo Wurmus
8c06ce3c22 gnu: r-regioner: Update to 1.20.1. 
* gnu/packages/bioconductor.scm (r-regioner): Update to 1.20.1.
 2020-06-22 12:15:49 +02:00
Ricardo Wurmus
48713c5d94 gnu: Add r-rlinsolve. 
* gnu/packages/cran.scm (r-rlinsolve): New variable.
 2020-06-22 12:15:49 +02:00
Mathieu Othacehe
b7f211bbbc gnu: cuirass: Update to 0.0.1-33-61cc56f6. 
* gnu/packages/ci.scm (cuirass): Update to 0.0.1-33-61cc56f6.
 2020-06-22 10:39:24 +02:00
Mathieu Othacehe
10c582fa22 gnu: xl2tpd: Fix typo. 
* gnu/packages/vpn.scm (xl2tpd)[arguments]: Turn "-DPPD" into "-DPPPD".
 2020-06-22 10:28:00 +02:00
Ricardo Wurmus
acba72b914 gnu: express: Update to 1.5.3. 
* gnu/packages/bioinformatics.scm (express): Update to 1.5.3.
[source]: Fetch from Github.
[arguments]: Add phase "remove-update-check".
 2020-06-22 09:07:51 +02:00
Tobias Geerinckx-Rice
0e0b5977b7 gnu: youtube-dl: Update to 2020.06.16. 
* gnu/packages/video.scm (youtube-dl): Update to 2020.06.16.
 2020-06-22 02:47:02 +02:00
Tobias Geerinckx-Rice
45ebb59a54 gnu: vmpk: Update home page. 
gnu/packages/music.scm (vmpk)[home-page]: Update TLD and use HTTPS.
 2020-06-22 02:47:02 +02:00
Jakub Kądziołka
f8a28b6c6d gnu: bison-3.6: Don't change the name of the package. 
This is a follow-up to commit 512d23c65d.

* gnu/packages/bison (bison-3.6)[name]: Remove the overridden value.
 2020-06-22 02:35:55 +02:00
Mark H Weaver
5a9a438146 gnu: linux-libre@4.14: Update to 4.14.185. 
* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.185.
(linux-libre-4.14-pristine-source): Update hash.
 2020-06-21 19:13:29 -04:00
Mark H Weaver
f1922ee156 gnu: linux-libre@4.9: Update to 4.9.228. 
* gnu/packages/linux.scm (linux-libre-4.9-version): Update to 4.9.228.
(linux-libre-4.9-pristine-source): Update hash.
 2020-06-21 19:13:01 -04:00
Mark H Weaver
8e5b17280c gnu: linux-libre@4.4: Update to 4.4.228. 
* gnu/packages/linux.scm (linux-libre-4.4-version): Update to 4.4.228.
(linux-libre-4.4-pristine-source): Update hash.
 2020-06-21 19:12:04 -04:00
Peter Lo
1d97e871dd gnu: Add r-boruta. 
* gnu/packages/statistics.scm (r-boruta): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2020-06-21 18:47:40 -04:00
Nicolas Goaziou
37ab7837e7 gnu: xmoto: Update to 0.6.1. 
* gnu/packages/games.scm (xmoto): Update to 0.6.1.
[arguments]: Remove phase installing man pages, now properly handled by the
installation script.
 2020-06-22 00:40:10 +02:00
Nicolas Goaziou
9546891f95 gnu: emacs-relint: Update to 1.18. 
* gnu/packages/emacs-xyz.scm (emacs-relint): Update to 1.18.
 2020-06-21 23:51:19 +02:00
Ludovic Courtès
89ab6bfbf1 gnu: guile: Add 3.0.3. 
* gnu/packages/guile.scm (guile-3.0.3): New variable.
 2020-06-21 23:37:29 +02:00
Nicolas Goaziou
6d7ed7c050 gnu: Add seahorse-adventures. 
* gnu/packages/games.scm (seahorse-adventures): New variable.
 2020-06-21 23:14:16 +02:00
Julien Lepiller
3f3c61b8d5 gnu: Add font-mplus-testflight. 
* gnu/packages/fonts.scm (font-mplus-testflight): New variable.
 2020-06-21 21:43:07 +02:00
Timotej Lazar
dbadca9ac7 gnu: k3b: Update to 20.04.2. 
* gnu/packages/kde-multimedia.scm (k3b): Update to 20.04.2.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2020-06-21 17:36:41 +02:00
Timotej Lazar
c9650cef1e gnu: k3b: Note the runtime dependency on udisks-service. 
* gnu/packages/kde-multimedia.scm (k3b)[description]: Note that udisks-service
should be enabled.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2020-06-21 17:36:41 +02:00
Timotej Lazar
4aa89a0914 gnu: k3b: Add inputs for libraries loaded at runtime. 
Patch the source to load these from absolute paths. Actual loading is done by
the Qt library, so we cannot use k3b’s runpath.

* gnu/packages/kde-multimedia.scm (k3b)[inputs]: Add libcdio-paranoia and
libdvdcss.
[arguments]<#:phases>[set-absolute-library-paths]: New phase.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2020-06-21 17:36:41 +02:00
Timotej Lazar
7afaab8bef gnu: k3b: Add inputs for external programs. 
* gnu/packages/kde-multimedia.scm (k3b)[inputs]: Add cdrdao, dvd+rw-tools,
libburn and sox.
[arguments]<#:phases>[wrap-path]: New phase to wrap the binary with paths to
the above.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2020-06-21 17:36:40 +02:00
Timotej Lazar
f458958543 gnu: Add cdrdao. 
* gnu/packages/cdrom.scm (cdrdao): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2020-06-21 17:36:40 +02:00
Leo Prikler
bdafdfcec9 gnu: add convmv. 
* gnu/packages/convmv.scm: New file.
* gnu/local.mk: Add it to build.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
 2020-06-21 15:53:06 +02:00
Julien Lepiller
5dca64fc97 gnu: Add font-fontna-yasashisa-antique. 
gnu/packages/fonts.scm (font-fontna-yasashisa-antique): New variable.
 2020-06-21 15:50:16 +02:00
Jan (janneke) Nieuwenhuizen
b7249aa472 services: childhurd: Support more than one instance. 
* gnu/services/virtualization.scm (<hurd-vm-configuration>)[options]: Remove
"--hda" option.
[id,net-options]: New fields.
(hurd-vm-net-options): New procedure.  Parameterize port forwarding with ID.
* gnu/services/virtualization.scm (hurd-vm-shepherd-service): Use them.
Parameterize provision with ID, if set.  Hardcode "--hda" option for image.
* doc/guix.texi (Virtualization Services): Document new fields.  Update for
hardcoding of "--hda".
 2020-06-21 12:51:36 +02:00
B. Wilson
512d23c65d gnu: Add poke. 
* gnu/packages/engineering.scm (poke): New variable.
* gnu/packages/bison.scm (bison-3.6): New variable.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
 2020-06-21 11:06:53 +02:00
Kyle Meyer
292b26d4e5 gnu: git-annex: Update to 8.20200617. 
* gnu/packages/haskell-apps.scm (git-annex): Update to 8.20200617.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-06-21 10:33:32 +03:00
Vinicius Monego
11fab4a85a gnu: emacs-hy-mode: Update to 1.0.4. 
* gnu/packages/emacs-xyz.scm (emacs-hy-mode): Update to 1.0.4.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2020-06-21 11:42:14 +08:00
Brice Waegeneire
f6c6970e0d system: Add 'sg' and 'newgrp' to %SETUID-PROGRAMS. 
* gnu/system.scm (%setuid-programs): Add 'sg' and 'newgrp'.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2020-06-21 11:35:55 +08:00
Nicolas Goaziou
027285691a gnu: xmoto: Unbundle ODE and libccd. 
* gnu/packages/games.scm (xmoto): Unbundle ODE and libccd.
[inputs]: Add ode.
 2020-06-21 01:47:05 +02:00
Nicolas Goaziou
fb5296605e gnu: xmoto: Update to 0.6.0-0-f7ca787. 
* gnu/packages/games.scm (xmoto): Update to 0.6.0-0-f7ca787.
[source]: Remove patches.
[arguments]: Remove make-flags keyword.
* gnu/packages/patches/xmoto-remove-glext.patch:
* gnu/packages/patches/xmoto-reproducible.patch:
* gnu/packages/patches/xmoto-utf8.patch: Delete files.
* gnu/local.mk: Register previous deletions.
 2020-06-21 00:45:08 +02:00
Nicolas Goaziou
a70e2f0f07 gnu: emacs-hyperbole: Use inputs instead of propagated inputs. 
* gnu/packages/emacs-xyz.scm (emacs-hyperbole)[arguments]: Replace domainname
with dnsdomainname, not hostname.
[propagated-inputs]: move to...
[inputs]: ...this.
 2020-06-21 00:13:38 +02:00
Pierre Langlois
377a5f65ed gnu: emacs-magit: Update to 0746bf1b. 
* gnu/packages/emacs-xyz.scm (emacs-magit): Update to 0746bf1b.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2020-06-21 00:02:15 +02:00
Nicolas Goaziou
915d898f15 gnu: emacs-hyperbole: Update to 7.0.6. 
* gnu/packages/emacs-xyz.scm (emacs-hyperbole): Update to 7.0.6.
[source]: Use GNU ELPA URL.  Remove some patches.
[arguments]: Add phase.
* gnu/packages/patches/emacs-hyperbole-do-not-check-dir.patch: Delete file.
* gnu/packages/patches/emacs-hyperbole-domainname.patch: Delete file.
* gnu/local.mk: Register sole patch.
 2020-06-20 23:41:45 +02:00
Ludovic Courtès
9015ed6688 gnu: gnutls: Pass #:tests? unconditionally. 
* gnu/packages/tls.scm (gnutls)[arguments]: Add #:tests? unconditionally.
 2020-06-20 23:36:02 +02:00
Ludovic Courtès
9ee8b41f2b gnu: gnutls: Leave #:disallowed-references empty for GNU/Hurd. 
Partly fixes <https://bugs.gnu.org/41775>.

This is a followup to a9bcc64746.

* gnu/packages/tls.scm (gnutls)[arguments]: Let #:disallowed-references
empty when 'hurd-target?' returns true.
 2020-06-20 23:36:01 +02:00
Leo Famulari
8562124862 gnu: Mutt: Update to 1.14.4. 
* gnu/packages/mail.scm (mutt): Update to 1.14.4.
 2020-06-20 17:28:14 -04:00
LaFreniere, Joseph
7d80d79524 gnu: Add emacs-hyperbole. 
* gnu/packages/emacs-xyz.scm (emacs-hyperbole): Add at 7.0.3

Signed-off-by: Jakub Kądziołka <kuba@kadziolka.net>
 2020-06-20 21:18:24 +02:00
Jakub Kądziołka
ef6d3b6436 gnu: Add hashcash. 
* gnu/packages/networking.scm (hashcash): New variable.
 2020-06-20 20:05:55 +02:00
Nicolas Goaziou
4330cca8de gnu: hydrogen: Update to 1.0.0-rc1. 
* gnu/packages/music.scm (hydrogen): Update to 1.0.0-rc1.
 2020-06-20 12:49:59 +02:00
Alex Sassmannshausen
aed0d0fd73 gnu: guile-config: Update to 0.4.2. 
* gnu/packages/guile-xyz.scm (guile-config): Update to 0.4.2.
 2020-06-20 11:58:03 +02:00
Vagrant Cascadian
d72009bf08 gnu: diffoscope: Update to 148. 
* gnu/packages/diffoscope (diffoscope): Update to 148.
  [arguments] Remove add-known-tools phase, fixed upstream.
 2020-06-19 14:06:29 -07:00
Tobias Geerinckx-Rice
748a167c81 gnu: sudo: Update to 1.9.1. 
* gnu/packages/admin.scm (sudo): Update to 1.9.1.
 2020-06-19 11:49:58 +02:00
Jan (janneke) Nieuwenhuizen
f25e8f76fe hurd-boot: Use 'setxattr' instead of invoking settrans. 
Note: Using `getxattr' on the Hurd instead of running showtrans does not
work (yet?).

* gnu/build/hurd-boot.scm (setup-translator): Use 'setxattr' instead of
invoking settrans.
* gnu/system.scm (hurd-multiboot-modules): Add --x-xattr-translator-records to
enable xattr-embedding of translators.
 2020-06-19 10:40:53 +02:00
Jan (janneke) Nieuwenhuizen
951847ee37 hurd-boot: Create individual translators instead of running MAKEDEV. 
* gnu/build/hurd-boot.scm (make-hurd-device-nodes): Do not create
dev/{null,zero,full,random,urandom} mount points.
(passive-translator-xattr?, passive-translator-installed?, translated?,
set-translator, set-hurd-device-translators): New procedures.
(false-if-EEXIST): New macro.
(boot-hurd-system): Use them instead of running MAKEDEV.
 2020-06-19 10:38:26 +02:00
Maxim Cournoyer
04a4af6dd4 uuid: Prevent a loop on invalid arguments. 
* gnu/system/uuid.scm (uuid=?): Use type predicates in the fallback case to
prevent looping on invalid arguments.
 2020-06-18 23:24:37 -04:00
Maxim Cournoyer
0dd04b9986 machine: ssh: Fix guix deploy hang when using non-DCE UUIDs. 
Fixes <https://issues.guix.gnu.org/issue/41237>.

The UUID type information was lost when passing to the lower gexp code strata,
which led to not being able to recreate the UUID in the generated script.
This occurred for non-DCE type UUIDs such as that of a FAT file system.

A following commit will prevent the find-partition-by-uuid procedure from
entering a loop when its UUID argument is invalid.

Reported-by: Brice Waegeneire <brice@waegenei.re>

* gnu/machine/ssh.scm (machine-check-file-system-availability): Replace the
STRING->UUID procedure by the UUID macro, and provide the UUID type as its
second argument.
 2020-06-18 23:20:41 -04:00
Ryan Prior via Guix-patches via
e520aa8f41 gnu: oil: Update to 0.8.pre6. 
* gnu/packages/shells.scm (oil): Update to 0.8.pre6.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2020-06-19 00:14:38 +02:00
Simen Endsjø
7fd5f901f6 gnu: Add Iosevka quasi-proportioal fonts. 
* gnu/packages/fonts.scm (font-iosevka-aile, font-iosevka-etoile,
font-iosevka-sparkle): New variables.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2020-06-18 23:50:14 +02:00