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Commit Graph

29053 Commits

Author SHA1 Message Date
Ricardo Wurmus
192c19f484 gnu: r-vegan: Update to 2.5-3.
* gnu/packages/bioinformatics.scm (r-vegan): Update to 2.5-3.
2018-10-30 21:40:00 +01:00
Ricardo Wurmus
696e1ce263 gnu: r-graph: Update to 1.58.2.
* gnu/packages/bioconductor.scm (r-graph): Update to 1.58.2.
2018-10-30 21:39:50 +01:00
Ricardo Wurmus
6ab5670aba gnu: r-nloptr: Update to 1.2.1.
* gnu/packages/statistics.scm (r-nloptr): Update to 1.2.1.
[native-inputs]: Add r-knitr and gfortran.
2018-10-30 21:39:39 +01:00
Ricardo Wurmus
c5bd8a7c23 gnu: r-devtools: Update to 2.0.1.
* gnu/packages/statistics.scm (r-devtools): Update to 2.0.1.
[propagated-inputs]: Remove r-whisker; add r-callr, r-cli, r-pkgbuild,
r-pkgload, r-rcmdcheck, r-remotes, r-sessioninfo, and r-usethis.
2018-10-30 21:39:29 +01:00
Ricardo Wurmus
aa99568639 gnu: r-evaluate: Update to 0.12.
* gnu/packages/statistics.scm (r-evaluate): Update to 0.12.
[propagated-inputs]: Remove r-stringr.
2018-10-30 21:39:16 +01:00
Ricardo Wurmus
60aac7ec16 gnu: r-robustbase: Update to 0.93-3.
* gnu/packages/statistics.scm (r-robustbase): Update to 0.93-3.
2018-10-30 21:39:06 +01:00
Ricardo Wurmus
16508df1d3 gnu: r-cardata: Update to 3.0-2.
* gnu/packages/statistics.scm (r-cardata): Update to 3.0-2.
2018-10-30 21:38:55 +01:00
Ricardo Wurmus
98a4b9d040 gnu: r-zoo: Update to 1.8-4.
* gnu/packages/statistics.scm (r-zoo): Update to 1.8-4.
2018-10-30 21:38:35 +01:00
Ricardo Wurmus
834f203c07 gnu: r-tidyselect: Update to 0.2.5.
* gnu/packages/statistics.scm (r-tidyselect): Update to 0.2.5.
2018-10-30 21:38:25 +01:00
Ricardo Wurmus
33fb92aacd gnu: r-doparallel: Update to 1.0.14.
* gnu/packages/statistics.scm (r-doparallel): Update to 1.0.14.
2018-10-30 21:38:16 +01:00
Ricardo Wurmus
3ea7aefd59 gnu: r-snow: Update to 0.4-3.
* gnu/packages/statistics.scm (r-snow): Update to 0.4-3.
2018-10-30 21:38:03 +01:00
Ricardo Wurmus
62a7492c90 gnu: r-plotrix: Update to 3.7-4.
* gnu/packages/statistics.scm (r-plotrix): Update to 3.7-4.
2018-10-30 21:37:53 +01:00
Ricardo Wurmus
943cab4f72 gnu: r-rstudioapi: Update to 0.8.
* gnu/packages/statistics.scm (r-rstudioapi): Update to 0.8.
2018-10-30 21:37:35 +01:00
Ricardo Wurmus
960425c9e3 gnu: r-commonmark: Update to 1.6.
* gnu/packages/statistics.scm (r-commonmark): Update to 1.6.
2018-10-30 21:37:25 +01:00
Ricardo Wurmus
e028eaa992 gnu: r-coda: Update to 0.19-2.
* gnu/packages/statistics.scm (r-coda): Update to 0.19-2.
2018-10-30 21:37:14 +01:00
Ricardo Wurmus
672ba7494b gnu: r-data-table: Update to 1.11.8.
* gnu/packages/statistics.scm (r-data-table): Update to 1.11.8.
2018-10-30 21:37:03 +01:00
Ricardo Wurmus
f75ee8c691 gnu: r-dplyr: Update to 0.7.7.
* gnu/packages/statistics.scm (r-dplyr): Update to 0.7.7.
2018-10-30 21:36:54 +01:00
Ricardo Wurmus
17f6198f06 gnu: r-rlang: Update to 0.3.0.1.
* gnu/packages/statistics.scm (r-rlang): Update to 0.3.0.1.
2018-10-30 21:36:44 +01:00
Ricardo Wurmus
822863f8f9 gnu: r-r6: Update to 2.3.0.
* gnu/packages/statistics.scm (r-r6): Update to 2.3.0.
2018-10-30 21:36:35 +01:00
Ricardo Wurmus
3a83251c4f gnu: r-testthat: Update to 2.0.1.
* gnu/packages/statistics.scm (r-testthat): Update to 2.0.1.
2018-10-30 21:36:24 +01:00
Ricardo Wurmus
cb448dd251 gnu: r-microbenchmark: Update to 1.4-6.
* gnu/packages/statistics.scm (r-microbenchmark): Update to 1.4-6.
2018-10-30 21:36:13 +01:00
Ricardo Wurmus
9f7438355d gnu: r-mine: Update to 0.6.
* gnu/packages/statistics.scm (r-mine): Update to 0.6.
2018-10-30 21:36:04 +01:00
Ricardo Wurmus
9413424d2d gnu: r-ggplot2: Update to 3.1.0.
* gnu/packages/statistics.scm (r-ggplot2): Update to 3.1.0.
2018-10-30 21:35:52 +01:00
Ricardo Wurmus
058394967c gnu: r-digest: Update to 0.6.18.
* gnu/packages/statistics.scm (r-digest): Update to 0.6.18.
2018-10-30 21:35:40 +01:00
Ricardo Wurmus
b85f805090 gnu: r-mgcv: Update to 1.8-25.
* gnu/packages/statistics.scm (r-mgcv): Update to 1.8-25.
2018-10-30 21:35:26 +01:00
Ricardo Wurmus
2f5e8f6094 gnu: r-mass: Update to 7.3-51.
* gnu/packages/statistics.scm (r-mass): Update to 7.3-51.
2018-10-30 21:35:12 +01:00
Ricardo Wurmus
2ea75a8369 gnu: Add r-npsurv.
* gnu/packages/cran.scm (r-npsurv): New variable.
2018-10-30 21:35:03 +01:00
Ricardo Wurmus
7c7ee6cf4c gnu: Add r-lsei.
* gnu/packages/cran.scm (r-lsei): New variable.
2018-10-30 21:34:55 +01:00
Ricardo Wurmus
74cc74e434 gnu: Add r-summarytools.
* gnu/packages/cran.scm (r-summarytools): New variable.
2018-10-30 21:34:45 +01:00
Ricardo Wurmus
319a80ce96 gnu: Add r-pander.
* gnu/packages/cran.scm (r-pander): New variable.
2018-10-30 21:34:35 +01:00
Ricardo Wurmus
9b02d1a11e gnu: Add r-rapportools.
* gnu/packages/cran.scm (r-rapportools): New variable.
2018-10-30 21:34:25 +01:00
Ricardo Wurmus
5df4e27fec gnu: Add r-rcmdcheck.
* gnu/packages/cran.scm (r-rcmdcheck): New variable.
2018-10-30 21:34:15 +01:00
Ricardo Wurmus
7d8f34707a gnu: Add r-xopen.
* gnu/packages/cran.scm (r-xopen): New variable.
2018-10-30 21:34:05 +01:00
Ricardo Wurmus
cbc8e6dd4a gnu: Add r-remotes.
* gnu/packages/cran.scm (r-remotes): New variable.
2018-10-30 21:33:56 +01:00
Ricardo Wurmus
993426244e gnu: Add r-sessioninfo.
* gnu/packages/cran.scm (r-sessioninfo): New variable.
2018-10-30 21:33:47 +01:00
Ricardo Wurmus
efefd3ec42 gnu: Add r-usethis.
* gnu/packages/cran.scm (r-usethis): New variable.
2018-10-30 21:33:37 +01:00
Ricardo Wurmus
153e5b2ddc gnu: Add r-clisymbols.
* gnu/packages/cran.scm (r-clisymbols): New variable.
2018-10-30 21:33:25 +01:00
Ricardo Wurmus
d6871153c8 gnu: Add r-fs.
* gnu/packages/cran.scm (r-fs): New variable.
2018-10-30 21:33:13 +01:00
Ricardo Wurmus
21405e81e7 gnu: Add r-gh.
* gnu/packages/cran.scm (r-gh): New variable.
2018-10-30 21:33:00 +01:00
Ricardo Wurmus
03f8011220 gnu: Add r-ini.
* gnu/packages/cran.scm (r-ini): New variable.
2018-10-30 21:32:45 +01:00
Danny Milosavljevic
46cb1c97cb gnu: rust: Accept more detailed gdb lines for simple enums.
* gnu/packages/patches/rust-1.25-accept-more-detailed-gdb-lines.patch: Modify.
* gnu/packages/rust.scm (rust-1.25)[arguments]<#:phases>[disable-nil-enum-test]:
Delete phase.
2018-10-30 20:20:55 +01:00
Efraim Flashner
a6f2afeee1 gnu: zathura-pdf-mupdf: Simplify arguments.
* gnu/packages/pdf.scm (zathura-pdf-mupdf)[arguments]: Remove custom
'patch-plugin-directory phase, replacd with configure-flag.
2018-10-30 11:15:40 +02:00
Efraim Flashner
24fc8f055d gnu: zathura-pdf-mupdf: Update to 0.3.4.
* gnu/packages/pdf.scm (zathura-pdf-mupdf): Update to 0.3.4.
[source]: Remove patch.
* gnu/packages/patches/zathura-pdf-mupdf-link-to-jpeg-libraries.patch:
Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-10-30 11:15:39 +02:00
Efraim Flashner
e726f0939e gnu: mupdf: Update license list.
* gnu/packages/pdf.scm (mupdf)[license]: Update the license list.
2018-10-30 11:15:36 +02:00
Efraim Flashner
b1435fe735 gnu: mupdf: Update to 1.14.
* gnu/packages/pdf.scm (mupdf): Update to 1.14.
[source]: Don't remove all the bundled libraries.
[arguments]: Add 'configure-flags to use system libraries.
2018-10-30 11:15:09 +02:00
Efraim Flashner
f8ddf719f3 gnu: mujs: Install shared library.
* gnu/packages/javascript.scm (mujs)[arguments]: Add custom phase to
install libmujs.so.
2018-10-30 11:03:48 +02:00
Efraim Flashner
1371e2250a gnu: mujs: Update to 1.0.5.
* gnu/packages/javascript.scm (mujs): Update to 1.0.5.
2018-10-30 11:03:06 +02:00
Leo Famulari
a2717e6986 gnu: calcurse: Use HTTPS URLs.
Reported by Marco van Hulten <marco@hulten.org>.

* gnu/packages/calcurse.scm (calcurse)[source, home-page]: Use HTTPS URLs.
2018-10-29 20:45:57 -04:00
Leo Famulari
b4c93a78c8 gnu: xorg-server: Update to 1.20.3 [fixes CVE-2018-14665].
* gnu/packages/xorg.scm (xorg-server): Update to 1.20.3.
2018-10-28 18:22:46 -04:00
Mathieu Othacehe
81f12f33b7 gnu: linux-libre: Enable BOCHS DRM support.
* gnu/packages/aux-files/linux-libre/4.19-x86_64.conf: Build DRM BOCHS support
as a module.  It adds DRM support for BOCHS dispi vga interface used by
qemu (-vga std option). It will also be useful for QEMU 3.0 to enable the new
"bochs-display" display device.
* gnu/packages/aux-files/linux-libre/4.19-i686.conf: Ditto.
2018-10-28 20:42:50 +09:00