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160,197 Commits 73 Branches 40 Tags
21d2e4a6321f6eaabc9fb7b0d94dea523737c981
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143053 Commits

Author SHA1 Message Date
Ricardo Wurmus
21d2e4a632 gnu: r-milor: Update to 2.4.1. 
* gnu/packages/bioconductor.scm (r-milor): Update to 2.4.1.

Change-Id: Ie58731e8bf176fde4e5e70e38504dc5b7ef57a45
 2025-05-13 14:50:14 +02:00
Ricardo Wurmus
38ba7b801f gnu: r-scone: Update to 1.32.1. 
* gnu/packages/bioconductor.scm (r-scone): Update to 1.32.1.

Change-Id: I4087316689bb32f7b892b291122ae7a89ff9ace4
 2025-05-13 14:50:14 +02:00
Ricardo Wurmus
5984b9ddbb gnu: r-treesummarizedexperiment: Update to 2.16.1. 
* gnu/packages/bioconductor.scm (r-treesummarizedexperiment): Update to 2.16.1.

Change-Id: I43666115877afe54857a9e93255e725eaaeb9237
 2025-05-13 14:50:14 +02:00
Ricardo Wurmus
fe8e769103 gnu: r-interactionset: Update to 1.36.1. 
* gnu/packages/bioconductor.scm (r-interactionset): Update to 1.36.1.

Change-Id: Ie5687ce5dc1de1d029f156950debbb0e520db17e
 2025-05-13 14:50:13 +02:00
Ricardo Wurmus
3e759802a9 gnu: r-variantannotation: Update to 1.54.1. 
* gnu/packages/bioconductor.scm (r-variantannotation): Update to 1.54.1.

Change-Id: I3607250b3db5e6fc99e95f8af79cce1bc24369d2
 2025-05-13 14:50:13 +02:00
Ricardo Wurmus
84ae5ddbaf gnu: r-txdbmaker: Update to 1.4.1. 
* gnu/packages/bioconductor.scm (r-txdbmaker): Update to 1.4.1.

Change-Id: Ia641479de6729e5cda6d8c971b61525e6c3773b6
 2025-05-13 14:50:13 +02:00
Ricardo Wurmus
5895ecb5e3 gnu: r-summarizedexperiment: Update to 1.38.1. 
* gnu/packages/bioconductor.scm (r-summarizedexperiment): Update to 1.38.1.

Change-Id: If0b1b287f7fa59b5dd59cfbc1e522d0abe325003
 2025-05-13 14:50:13 +02:00
Ricardo Wurmus
bd554c63b8 gnu: r-stager: Update to 1.30.1. 
* gnu/packages/bioconductor.scm (r-stager): Update to 1.30.1.

Change-Id: Iaac5a037e08055c9d6b134fee8823ccdd93587a8
 2025-05-13 14:50:13 +02:00
Ricardo Wurmus
717d395a29 gnu: r-trajectoryutils: Update to 1.16.1. 
* gnu/packages/bioconductor.scm (r-trajectoryutils): Update to 1.16.1.

Change-Id: I81f2ccc2ce1dbccb724cacd8ac2bab7747fd1d36
 2025-05-13 14:50:13 +02:00
Ricardo Wurmus
fafd4707b6 gnu: r-mosdef: Update to 1.4.1. 
* gnu/packages/bioconductor.scm (r-mosdef): Update to 1.4.1.

Change-Id: I36c395936aa2741d56762f8d4b44c1fac83adcf9
 2025-05-13 14:50:13 +02:00
Ricardo Wurmus
dcf2c2a414 gnu: r-raggedexperiment: Update to 1.32.2. 
* gnu/packages/bioconductor.scm (r-raggedexperiment): Update to 1.32.2.

Change-Id: Ic0ef5b5d879cf418ab0929a7322d557d42452ff0
 2025-05-13 14:50:13 +02:00
Ricardo Wurmus
30aa9b1a65 gnu: r-genomicfiles: Update to 1.44.1. 
* gnu/packages/bioconductor.scm (r-genomicfiles): Update to 1.44.1.

Change-Id: I096e8440de2d2b6b5265cca130530d8f821d4e5c
 2025-05-13 14:50:12 +02:00
Ricardo Wurmus
7848e8baae gnu: r-genomation: Update to 1.40.1. 
* gnu/packages/bioconductor.scm (r-genomation): Update to 1.40.1.

Change-Id: I29f812992afd0832b0a262ad5d8e3aa6d475c3f2
 2025-05-13 14:50:12 +02:00
Ricardo Wurmus
6dd49589c5 gnu: r-enmix: Update to 1.44.1. 
* gnu/packages/bioconductor.scm (r-enmix): Update to 1.44.1.

Change-Id: If69c903e02b3108ef17189bcd0aac3752fa0a7f8
 2025-05-13 14:50:12 +02:00
Ricardo Wurmus
49e3d56a87 gnu: r-edger: Update to 4.6.2. 
* gnu/packages/bioconductor.scm (r-edger): Update to 4.6.2.

Change-Id: Ifa116d651fa04cf300de48cd931a2661df609542
 2025-05-13 14:50:12 +02:00
Ricardo Wurmus
5b27dbb67e gnu: r-dexseq: Update to 1.54.1. 
* gnu/packages/bioconductor.scm (r-dexseq): Update to 1.54.1.

Change-Id: I52f24353dbf1ee9160f17cc0c510a8a172b73905
 2025-05-13 14:50:12 +02:00
Ricardo Wurmus
b3d544ad7e gnu: r-deseq2: Update to 1.48.1. 
* gnu/packages/bioconductor.scm (r-deseq2): Update to 1.48.1.

Change-Id: Ieb18674dab9b016f37b880a06f772fbbdbadddb7
 2025-05-13 14:50:12 +02:00
Ricardo Wurmus
8cbf771e0a gnu: r-s2: Update to 1.1.8. 
* gnu/packages/cran.scm (r-s2): Update to 1.1.8.
[properties]: Record updater-extra-inputs and updater-ignored-native-inputs;
remove updater-extra-native-inputs.
[inputs]: Addd abseil-cpp.
[native-inputs]: Add r-geos.

Change-Id: If251e8c086dfa6d26bc1ca879d2d5a9adcd7a298
 2025-05-13 14:50:12 +02:00
Ricardo Wurmus
bc1fdb66d5 gnu: r-r-cache: Update to 0.17.0. 
* gnu/packages/statistics.scm (r-r-cache): Update to 0.17.0.

Change-Id: Iab4a74bda2949e140e01cc98aa1539ca4c043725
 2025-05-13 14:50:11 +02:00
Ricardo Wurmus
76002774a2 gnu: r-r-oo: Update to 1.27.1. 
* gnu/packages/statistics.scm (r-r-oo): Update to 1.27.1.

Change-Id: Icc063657cecc6302fc565daf88698cd01e62ad12
 2025-05-13 14:50:11 +02:00
Ricardo Wurmus
ccf028c417 gnu: r-rsqlite: Update to 2.3.11. 
* gnu/packages/statistics.scm (r-rsqlite): Update to 2.3.11.

Change-Id: I45c85b23ccd0682a6f4159e673dea9d2edf63912
 2025-05-13 14:50:11 +02:00
Ricardo Wurmus
afe535fba5 gnu: r-mockr: Update to 0.2.2. 
* gnu/packages/cran.scm (r-mockr): Update to 0.2.2.

Change-Id: I90d156fc3caf0f9079bd38666c71007ee975ab5f
 2025-05-13 14:50:11 +02:00
Ricardo Wurmus
193afb4148 gnu: r-textshaping: Update to 1.0.1. 
* gnu/packages/cran.scm (r-textshaping): Update to 1.0.1.

Change-Id: I7e46cff319bda66c446254981c1252783ca4fcce
 2025-05-13 14:50:11 +02:00
Ricardo Wurmus
67e1266a4e gnu: r-maxstat: Update to 0.7-26. 
* gnu/packages/cran.scm (r-maxstat): Update to 0.7-26.

Change-Id: I1c51c7727a52167b15a6578f1b97801e05c8f01a
 2025-05-13 14:50:11 +02:00
Ricardo Wurmus
a75f461e17 gnu: r-spatstat-univar: Update to 3.1-3. 
* gnu/packages/cran.scm (r-spatstat-univar): Update to 3.1-3.

Change-Id: Ie4f2493b2f7993ab6f16845ebb641b63b3c919e8
 2025-05-13 14:50:11 +02:00
Ricardo Wurmus
35e9b9f15e gnu: r-rpf: Update to 1.0.15. 
* gnu/packages/cran.scm (r-rpf): Update to 1.0.15.
[native-inputs]: Add r-ggplot2 and r-reshape2.

Change-Id: Ibfb3137d407b3c3984b5932c685af67802c4c20a
 2025-05-13 14:50:10 +02:00
Ricardo Wurmus
72c587712d gnu: r-archetypes: Update to 2.2-0.2. 
* gnu/packages/cran.scm (r-archetypes): Update to 2.2-0.2.

Change-Id: I7db9b9cb6c59a55cd133623af753f8aee6f8cde5
 2025-05-13 14:50:10 +02:00
Ricardo Wurmus
221c469c87 gnu: r-gdina: Update to 2.9.9. 
* gnu/packages/cran.scm (r-gdina): Update to 2.9.9.

Change-Id: Ia08f2e678a6c17baa235d1fae9bc7f6907392189
 2025-05-13 14:50:10 +02:00
Ricardo Wurmus
03e6424c84 gnu: r-txtplot: Update to 1.0-5. 
* gnu/packages/cran.scm (r-txtplot): Update to 1.0-5.
[propagated-inputs]: Add r-matrix.

Change-Id: I62681e007c5d80beb0d67cad97b3747ec167be43
 2025-05-13 14:50:10 +02:00
Ricardo Wurmus
d3e09ae753 gnu: r-terra: Update to 1.8-50. 
* gnu/packages/cran.scm (r-terra): Update to 1.8-50.
[inputs]: Add netcdf.

Change-Id: If9e78e2f3a8cb758634b6d15251b82e709b23680
 2025-05-13 14:50:10 +02:00
Ricardo Wurmus
66fe30f151 gnu: r-systemfonts: Update to 1.2.3. 
* gnu/packages/cran.scm (r-systemfonts): Update to 1.2.3.
[propagated-inputs]: Add r-base64enc.

Change-Id: I0aa6483d17b24e755321f256b2de1e81d300fd6e
 2025-05-13 14:50:10 +02:00
Ricardo Wurmus
a74d1ffa3c gnu: r-sctransform: Update to 0.4.2. 
* gnu/packages/cran.scm (r-sctransform): Update to 0.4.2.

Change-Id: Iebeeafe17e1941de827e26674b29277ff1f0816c
 2025-05-13 14:50:09 +02:00
Ricardo Wurmus
5c7e1df56d gnu: r-arrow: Update to 20.0.0. 
* gnu/packages/cran.scm (r-arrow): Update to 20.0.0.

Change-Id: I7164eea8e8f8193742188bf2d9cd04e6b53d5b14
 2025-05-13 14:50:09 +02:00
Ricardo Wurmus
be8ba920be gnu: r-future: Update to 1.49.0. 
* gnu/packages/cran.scm (r-future): Update to 1.49.0.

Change-Id: I6ff70800c1ed292e02410db5d4fb3e75b4e326cc
 2025-05-13 14:50:09 +02:00
Ricardo Wurmus
0bc96404eb gnu: r-parallelly: Update to 1.44.0. 
* gnu/packages/cran.scm (r-parallelly): Update to 1.44.0.

Change-Id: Iabbe2aa392e45e67f29ace68780cda12655f5a66
 2025-05-13 14:50:09 +02:00
Ricardo Wurmus
f21954d2e8 gnu: r-globals: Update to 0.18.0. 
* gnu/packages/cran.scm (r-globals): Update to 0.18.0.

Change-Id: Iecf3ffc306d88b36746921576cd7a7536d133781
 2025-05-13 14:50:09 +02:00
Ricardo Wurmus
8ee8792a22 gnu: r-softimpute: Update to 1.4-2. 
* gnu/packages/cran.scm (r-softimpute): Update to 1.4-2.

Change-Id: I6c65666f4c68a79732af1c1e6ce9423954431a24
 2025-05-13 14:50:09 +02:00
Ricardo Wurmus
6d71d58dbb gnu: r-ks: Update to 1.15.1. 
* gnu/packages/cran.scm (r-ks): Update to 1.15.1.

Change-Id: If1c691e4a83b2889fa176cfce9b79a8193af664a
 2025-05-13 14:50:08 +02:00
Ricardo Wurmus
057b193561 gnu: r-emmeans: Update to 1.11.1. 
* gnu/packages/cran.scm (r-emmeans): Update to 1.11.1.

Change-Id: Ifa628a1721941e1cc07b4c4a6025d818a917a5bb
 2025-05-13 14:50:08 +02:00
Ricardo Wurmus
0d534a2b9b gnu: r-tarchetypes: Update to 0.13.1. 
* gnu/packages/cran.scm (r-tarchetypes): Update to 0.13.1.

Change-Id: I9bac9658fcc86d9f5e5757f9407c0909cbb5b61c
 2025-05-13 14:50:08 +02:00
Ricardo Wurmus
b6c5b2dbb1 gnu: r-labelled: Update to 2.14.1. 
* gnu/packages/cran.scm (r-labelled): Update to 2.14.1.

Change-Id: Ic5d0fa93b650903c74acd9c35e59301626b90cbf
 2025-05-13 14:50:08 +02:00
Ricardo Wurmus
bd2a63a62c gnu: r-reformulas: Update to 0.4.1. 
* gnu/packages/cran.scm (r-reformulas): Update to 0.4.1.

Change-Id: I92060b1f4a4dd4178090cab743c108357757f7db
 2025-05-13 14:50:08 +02:00
Ricardo Wurmus
6985316ec9 gnu: r-cubature: Update to 2.1.2. 
* gnu/packages/cran.scm (r-cubature): Update to 2.1.2.

Change-Id: Id29c3173aeeedcc4035dd3881d87393e35fa28b8
 2025-05-13 14:50:08 +02:00
Ricardo Wurmus
8961f80902 gnu: r-utf8: Update to 1.2.5. 
* gnu/packages/cran.scm (r-utf8): Update to 1.2.5.
[native-inputs]: Add r-cli, r-rlang, and r-withr.

Change-Id: I2fc7885c14b23f5476d041925fa1829c7b087ac8
 2025-05-13 14:50:08 +02:00
Ricardo Wurmus
053314f2e7 gnu: r-statsexpressions: Update to 1.7.0. 
* gnu/packages/cran.scm (r-statsexpressions): Update to 1.7.0.

Change-Id: I330c10fdb4b0c0b3644e79d616cfc985d9a691e8
 2025-05-13 14:50:07 +02:00
Ricardo Wurmus
3cb6c9f051 gnu: r-generics: Update to 0.1.4. 
* gnu/packages/cran.scm (r-generics): Update to 0.1.4.

Change-Id: Icc6a6ce86b9bdae4e5e97508ff6d36ea8dc4a751
 2025-05-13 14:50:07 +02:00
Ricardo Wurmus
ef5c14645a gnu: r-ctrdata: Update to 1.22.1. 
* gnu/packages/cran.scm (r-ctrdata): Update to 1.22.1.

Change-Id: I39488e5558fe234d6b3bd70cb6e27a72bc7ca70b
 2025-05-13 14:50:07 +02:00
Ricardo Wurmus
3f1f9af4dd gnu: r-rcppspdlog: Update to 0.0.22. 
* gnu/packages/cran.scm (r-rcppspdlog): Update to 0.0.22.

Change-Id: Ie5716c8ea4adf1f99716195f0b0eea1e6695859e
 2025-05-13 14:50:07 +02:00
Ricardo Wurmus
273d81aa6e gnu: r-rstpm2: Update to 1.6.7. 
* gnu/packages/cran.scm (r-rstpm2): Update to 1.6.7.
[propagated-inputs]: Remove r-bh; add r-numderiv.

Change-Id: I5bd4e6dc1909e2bdcdd815e032bea4c013519942
 2025-05-13 14:50:07 +02:00
Ricardo Wurmus
0fbcbda60a gnu: r-depmixs4: Update to 1.5-1. 
* gnu/packages/cran.scm (r-depmixs4): Update to 1.5-1.
[native-inputs]: Add r-gamlss-dist.

Change-Id: I392106b6b465c3e72b3822904b795a3203ab791a
 2025-05-13 14:50:07 +02:00