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72418 Commits

Author SHA1 Message Date
Morgan Smith 32b02fd99c gnu: emacs-nov-el: Update to 0.3.4. 
* gnu/packages/emacs-xyz.scm (emacs-nov-el): Update to 0.3.4.
[arguments]<#:emacs>: Use emacs for libxml.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
 2021-07-25 12:13:01 +02:00
Raghav Gururajan f703bef87a gnu: weston: Enable some features. 
* gnu/packages/freedesktop.scm (weston)[inputs]: Add freerdp,
gstreamer and gst-plugins-base.
[configure-flags](backend-rdp,remoting): Remove flags.
(backend-default): New flag.
 2021-07-25 02:00:22 -04:00
Raghav Gururajan dd3de0c475 gnu: freerdp: Propagate some inputs as per pkg-config files. 
* gnu/packages/rdesktop.scm (freerdp)[inputs]: Move libxkbcommon,
openssl and wayland to ...
[propagated-inputs]: ... here.
 2021-07-25 02:00:22 -04:00
Raghav Gururajan e0fc091319 gnu: weston: Fix package inputs. 
The newly added inputs are referenced by the package but was missing in
the package definition. Some of these inputs might have been used
by the package indirectly via propagation from other inputs. The moved
inputs are referenced in pkg-config files.

* gnu/packages/freedesktop.scm (weston)[inputs]: Add glib, libdrm,
libpng, libx11 and libxcb. Move libxkbcommon and wayland to ...
[propagated-inputs]: ... here. Add pixman.
 2021-07-25 02:00:22 -04:00
Raghav Gururajan 17a8656bc7 gnu: weston: Update to 9.0.0 and adjust arguments+inputs accordingly. 
* gnu/packages/freedesktop.scm (weston)[version]: Update to 9.0.0.
[configure-flags](c_link_args): New flag.
(simple-dmabuf-drm): Remove flag.
[native-inputs]: Add mscgen.
[inputs]: Add pipewire.
 2021-07-25 01:59:49 -04:00
Tobias Geerinckx-Rice 45881ea747 gnu: perl-http-cookiejar: Update to 0.012. 
This fixes its build which had started to fail due to a time-bomb:

  Expires=Wed, 09 Jun 2021 10:18:14 GMT

in an examples.t test cookie.

* gnu/packages/web.scm (perl-http-cookiejar): Update to 0.012.
 2021-07-25 01:55:45 +02:00
Tobias Geerinckx-Rice c7b51b799d gnu: esmtp: Fix build with libesmtp >= 1.1.0. 
* gnu/packages/mail.scm (esmtp)[source]: Add patch.
* gnu/packages/patches/esmtp-add-lesmtp.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
 2021-07-24 23:59:07 +02:00
Guillaume Le Vaillant e463e09dc2 services: dhcpd: Fix activation with IPv6 configuration. 
* gnu/services/networking.scm (dhcpd-activation): Pass the IP version
  parameter to dhcpd.
 2021-07-24 15:38:03 +02:00
Pierre Neidhardt fe0c3aee02 gnu: Add feeder. 
* gnu/packages/lisp-xyz.scm (cl-feeder, ecl-feeder, sbcl-feeder): New variables.
 2021-07-24 11:58:45 +02:00
Tobias Geerinckx-Rice c3c003be69 gnu: java-xmlpull2: Use mirrored source and archived home page. 
* gnu/packages/xml.scm (java-xmlpull2)[source]: Download from a Gentoo
distfiles mirror.
[home-page]: Point to an archive.org snapshot.
 2021-07-23 23:29:34 +02:00
Marius Bakke 277f58040b gnu: graphviz: Use HTTPS home page. 
* gnu/packages/graphviz.scm (graphviz)[home-page]: Use HTTPS.
 2021-07-23 17:29:34 +02:00
Marius Bakke 379bb236d4 gnu: php: Update to 7.4.21. 
* gnu/packages/php.scm (php): Update to 7.4.21.
[arguments]: Remove trailing #t's.
[native-inputs]: Remove INTLTOOL. Add GETTEXT-MINIMAL.
 2021-07-23 17:29:34 +02:00
Ludovic Courtès c4918b54bb gnu: tmux-themepack: Tweak description. 
* gnu/packages/tmux.scm (tmux-themepack)[description]: Tweak.
 2021-07-23 17:02:29 +02:00
Matthew James Kraai efcd669c5a gnu: tmux-themepack: Update to 1.1.0. 
* gnu/packages/tmux.scm (tmux-themepack): Update to 1.1.0.
[arguments]: Install only selected files.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-07-23 17:02:29 +02:00
Ludovic Courtès 7273b66945 gnu: modules: Avoid FHS file names in 'add.modules'. 
* gnu/packages/package-management.scm (modules)[arguments]: Add
'patch-add-modules' phase.
 2021-07-23 17:02:29 +02:00
Ivan Gankevich 8bcd920c71 gnu: Add modules. 
* gnu/packages/package-management.scm (modules): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-07-23 17:02:28 +02:00
Ludovic Courtès 1665bb0cec gnu: hpcguix-web: Update to 0.1.0. 
* gnu/packages/web.scm (hpcguix-web): Update to 0.1.0.
[arguments]: In 'wrap-program' phase, change "/bin/run" to
"/bin/hpcguix-web".
[inputs]: Add BASH-MINIMAL.
* gnu/services/web.scm (hpcguix-web-shepherd-service): Run
"/bin/hpcguix-web".
 2021-07-23 17:02:28 +02:00
Andreas Enge b48bc8953d gnu: pari-gp: Update to 2.13.2. 
* gnu/packages/algebra.scm (pari-gp): Update to 2.13.2.
 2021-07-23 15:28:03 +02:00
Leo Prikler 4e19ad0fde gnu: gnome-maps: Update to 3.38.5. 
* gnu/packages/geo.scm (gnome-maps): Update to 3.38.5.
 2021-07-23 12:41:01 +02:00
Guillaume Le Vaillant 785c96fbe1 gnu: Add radvd. 
* gnu/packages/admin.scm (radvd): New variable.
 2021-07-23 11:33:36 +02:00
宋文武 89ea0918a4 gnu: Add drawterm. 
* gnu/packages/plan9.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
 2021-07-22 19:52:53 +08:00
Pierre Neidhardt d98fc80ffb gnu: Add cl-libxml2. 
* gnu/packages/lisp-xyz.scm (cl-libxml2, ecl-cl-libxml2, sbcl-cl-libxml2): New
variables.
 2021-07-22 13:03:52 +02:00
Ricardo Wurmus aa2686c368 gnu: r-opencpu: Update to 2.2.4. 
* gnu/packages/cran.scm (r-opencpu): Update to 2.2.4.
 2021-07-22 11:37:25 +02:00
Sharlatan Hellseher 9cfa6c3c58 gnu: Add r-opencpu 
* gnu/packages/cran.scm: (r-opencpu): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2021-07-22 11:37:25 +02:00
Sharlatan Hellseher 2b6dd1bde5 gnu: Add r-protolite 
* gnu/packages/cran.scm: (r-protolite): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2021-07-22 11:37:25 +02:00
Sharlatan Hellseher c5baff1796 gnu: Add r-webutils 
* gnu/packages/cran.scm (r-webutils): New variable.
 2021-07-22 11:37:21 +02:00
Paul Garlick b05a1eb5e3 gnu: Add python-dolfin-adjoint. 
* gnu/packages/simulation.scm (python-dolfin-adjoint): New variable.
 2021-07-22 10:03:53 +01:00
jgart 4c63efa5e3 gnu: Add abjad-ext-ipython. 
* gnu/packages/music.scm (abjad-ext-ipython): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-07-22 11:50:14 +03:00
jgart ccfcbadd68 gnu: Add abjad-ext-nauert. 
* gnu/packages/music.scm (abjad-ext-nauert): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-07-22 11:48:45 +03:00
jgart a909460099 gnu: Add abjad-ext-rmakers. 
* gnu/packages/music.scm (abjad-ext-rmakers): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-07-22 11:48:41 +03:00
Efraim Flashner 454460ca55 gnu: abjad: Remove obsolete phase. 
* gnu/packages/music.scm (abjad)[arguments]: Remove custom 'patch-source
phase.
 2021-07-22 11:14:33 +03:00
Efraim Flashner 91c42e4767 gnu: abjad: Move lilypond to inputs. 
* gnu/packages/music.scm (abjad)[native-inputs]: Move lilypond ...
[inputs]: ... to here.
 2021-07-22 11:13:57 +03:00
jgart 18f9e21b18 gnu: abjad: Improve description. 
* gnu/packages/music.scm (abjad)[description]: Improve abjad's
description.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-07-22 11:06:58 +03:00
jgart dd7c2d2b1d gnu: abjad: Move python-ply to propagated-inputs. 
* gnu/packages/music.scm (abjad)[ntaive-inputs]: Move python-ply ...
[propagated-inputs]: ... to here.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-07-22 11:05:41 +03:00
jgart 5535d5435e gnu: python-abjad: Rename to abjad. 
* gnu/packages/music.scm (abjad): Rename from python-abjad.
(python-abjad): Keep as deprecated package.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-07-22 11:04:10 +03:00
Efraim Flashner fd8aea010f gnu: python-pysam: Make the check phase honor the tests? argument. 
* gnu/packages/bioinformatics.scm (python-pysam)[arguments]: Adjust
custom 'check phase to skip tests when #:tests is #f.
 2021-07-22 10:58:22 +03:00
Efraim Flashner 877792a6a7 gnu: python-pysam: Update to 0.16.0.1. 
* gnu/packages/bioinformatics.scm (python-pysam): Update to 0.16.0.1.
[arguments]: Update custom 'check phase.
[propagated-inputs]: Replace htslib-1.9 with 1.10.
[native-inputs]: Add python-pytest. Replace samtools-1.9 with 1.10,
bcftools-1.9 with 1.10.
(bcftools-1.9): Replace with bcftools-1.10.
[native-inputs]: Replace htslib-1.9 with 1.10.
(samtools-1.9): Replace with samtools-1.10.
[inputs]: Replace htslib-1.9 with 1.10.
 2021-07-22 10:57:41 +03:00
Efraim Flashner cc4906d13b gnu: Add htslib-1.10. 
* gnu/packages/bioinformatics.scm (htslib-1.10): New variable.
 2021-07-22 10:50:58 +03:00
Efraim Flashner 309b38bed6 gnu: python-biopython: Update to 1.73. 
* gnu/packages/bioinformatics.scm (python-biopython): Update to 1.73.
 2021-07-22 09:14:12 +03:00
Eric Bavier 55db762b31 gnu: onionshare: Update to 2.3.2. 
* gnu/packages/tor.scm (onionshare-cli, onionshare): Update to 2.3.2.
(onionshare)[inputs]: Add python-colorama.
[arguments]: Insert "import pytest" for later "pytest.mark.skip".
 2021-07-21 23:08:14 -05:00
Joseph LaFreniere e9d47ee718 gnu: Add emacs-seeing-is-believing. 
* gnu/packages/emacs-xyz.scm (emacs-seeing-is-believing): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-07-22 00:02:33 +02:00
Ludovic Courtès de1ae96184 gnu: guile-git: Update to 0.5.2. 
Fixes <https://issues.guix.gnu.org/48855>.
Reported by Maxim Cournoyer <maxim.cournoyer@gmail.com>.

* gnu/packages/guile.scm (guile-git): Update to 0.5.2.
 2021-07-22 00:02:30 +02:00
Giacomo Leidi 1f07d4436c gnu: extempore: Update to 0.8.9. 
* gnu/packages/music.scm (extempore): Update to 0.8.6.
[source]: Portaudio is no more in-tree.
[arguments]: Load external libraries through patched CMakeLists.txt.
[phases]: Symlink assets.
* gnu/packages/patches/extempore-unbundle-external-dependencies.patch:
Update accordingly.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2021-07-21 23:00:51 +02:00
Lars-Dominik Braun 403a689625 gnu: Add python-sparqlkernel. 
* gnu/packages/jupyter.scm (python-sparqlkernel): New variable.
 2021-07-21 13:36:09 +02:00
Lars-Dominik Braun 281808170a gnu: Add python-sparqlwrapper. 
* gnu/packages/rdf.scm (python-sparqlwrapper): New variable.
 2021-07-21 13:36:09 +02:00
Lars-Dominik Braun d57c34d26b gnu: Add python-bash-kernel. 
* gnu/packages/jupyter.scm (python-bash-kernel): New variable.
 2021-07-21 13:36:08 +02:00
Lars-Dominik Braun 73830b5da3 gnu: Add r-battenberg. 
* gnu/packages/bioinformatics.scm (r-battenberg): New variable.
 2021-07-21 13:36:08 +02:00
Lars-Dominik Braun ed636babfa gnu: Add r-ascat. 
* gnu/packages/bioinformatics.scm (r-ascat): New variable.
 2021-07-21 13:36:08 +02:00
Lars-Dominik Braun 690df95d1a gnu: Add nanosv. 
* gnu/packages/bioinformatics.scm (nanosv): New variable.
 2021-07-21 13:36:08 +02:00
Lars-Dominik Braun 2b665b8a49 gnu: Add python-pyvcf. 
* gnu/packages/bioinformatics.scm (python-pyvcf): New variable.
 2021-07-21 13:36:08 +02:00