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80,420 Commits 74 Branches 40 Tags
3fdb2d679259f5d1541240dd4e9cedda17040bf2
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1726 Commits

Author SHA1 Message Date
Ricardo Wurmus
38fa99c1d0 gnu: r-rcas: Update to 1.18.0. 
* gnu/packages/bioconductor.scm (r-rcas): Update to 1.18.0.
[propagated-inputs]: Add r-knitr.
 2021-06-05 09:12:44 +02:00
Ricardo Wurmus
7c45bc9391 gnu: r-rbgl: Update to 1.68.0. 
* gnu/packages/bioconductor.scm (r-rbgl): Update to 1.68.0.
 2021-06-05 09:12:44 +02:00
Ricardo Wurmus
dc67525ae6 gnu: r-protgenerics: Update to 1.24.0. 
* gnu/packages/bioconductor.scm (r-protgenerics): Update to 1.24.0.
 2021-06-05 09:12:44 +02:00
Ricardo Wurmus
0ec6177cc1 gnu: r-pcamethods: Update to 1.84.0. 
* gnu/packages/bioconductor.scm (r-pcamethods): Update to 1.84.0.
 2021-06-05 09:12:44 +02:00
Ricardo Wurmus
5d37cee6c1 gnu: r-organismdbi: Update to 1.34.0. 
* gnu/packages/bioconductor.scm (r-organismdbi): Update to 1.34.0.
 2021-06-05 09:12:44 +02:00
Ricardo Wurmus
00b2174930 gnu: r-mzid: Update to 1.30.0. 
* gnu/packages/bioconductor.scm (r-mzid): Update to 1.30.0.
 2021-06-05 09:12:44 +02:00
Ricardo Wurmus
d647eb090b gnu: r-msnbase: Update to 2.18.0. 
* gnu/packages/bioconductor.scm (r-msnbase): Update to 2.18.0.
[propagated-inputs]: Remove r-preprocesscore; add r-mscoreutils.
 2021-06-05 09:12:43 +02:00
Ricardo Wurmus
c966cef2b4 gnu: r-mutationalpatterns: Update to 3.2.0. 
* gnu/packages/bioconductor.scm (r-mutationalpatterns): Update to 3.2.0.
 2021-06-05 09:12:43 +02:00
Ricardo Wurmus
0b3fd7e89a gnu: r-methylkit: Update to 1.18.0. 
* gnu/packages/bioconductor.scm (r-methylkit): Update to 1.18.0.
 2021-06-05 09:12:43 +02:00
Ricardo Wurmus
595b75e05c gnu: r-limma: Update to 3.48.0. 
* gnu/packages/bioconductor.scm (r-limma): Update to 3.48.0.
 2021-06-05 09:12:43 +02:00
Ricardo Wurmus
60b598ee16 gnu: r-keggrest: Update to 1.32.0. 
* gnu/packages/bioconductor.scm (r-keggrest): Update to 1.32.0.
 2021-06-05 09:12:43 +02:00
Ricardo Wurmus
2cbb8e19af gnu: r-interactivedisplaybase: Update to 1.30.0. 
* gnu/packages/bioconductor.scm (r-interactivedisplaybase): Update to 1.30.0.
 2021-06-05 09:12:43 +02:00
Ricardo Wurmus
94b4e64fd0 gnu: r-impute: Update to 1.66.0. 
* gnu/packages/bioconductor.scm (r-impute): Update to 1.66.0.
 2021-06-05 09:12:43 +02:00
Ricardo Wurmus
76fc8a53b2 gnu: r-rhtslib: Update to 1.24.0. 
* gnu/packages/bioconductor.scm (r-rhtslib): Update to 1.24.0.
 2021-06-05 09:12:43 +02:00
Ricardo Wurmus
78eb1fdf3e gnu: r-hpar: Update to 1.34.0. 
* gnu/packages/bioconductor.scm (r-hpar): Update to 1.34.0.
 2021-06-05 09:12:43 +02:00
Ricardo Wurmus
330a7fe3b1 gnu: r-gseabase: Update to 1.54.0. 
* gnu/packages/bioconductor.scm (r-gseabase): Update to 1.54.0.
 2021-06-05 09:12:43 +02:00
Ricardo Wurmus
214e784b57 gnu: r-gostats: Update to 2.58.0. 
* gnu/packages/bioconductor.scm (r-gostats): Update to 2.58.0.
 2021-06-05 09:12:43 +02:00
Ricardo Wurmus
1b44202e20 gnu: r-genomicranges: Update to 1.44.0. 
* gnu/packages/bioconductor.scm (r-genomicranges): Update to 1.44.0.
 2021-06-05 09:12:43 +02:00
Ricardo Wurmus
d491b7eb1a gnu: r-genomicfiles: Update to 1.28.0. 
* gnu/packages/bioconductor.scm (r-genomicfiles): Update to 1.28.0.
 2021-06-05 09:12:43 +02:00
Ricardo Wurmus
62889b9915 gnu: r-genomicfeatures: Update to 1.44.0. 
* gnu/packages/bioconductor.scm (r-genomicfeatures): Update to 1.44.0.
[propagated-inputs]: Add r-biocio.
 2021-06-05 09:12:43 +02:00
Ricardo Wurmus
570e80d62f gnu: r-genomicalignments: Update to 1.28.0. 
* gnu/packages/bioconductor.scm (r-genomicalignments): Update to 1.28.0.
 2021-06-05 09:12:43 +02:00
Ricardo Wurmus
f88ab81fc7 gnu: r-genomeinfodb: Update to 1.28.0. 
* gnu/packages/bioconductor.scm (r-genomeinfodb): Update to 1.28.0.
 2021-06-05 09:12:43 +02:00
Ricardo Wurmus
ef7bbc40de gnu: r-genomation: Update to 1.24.0. 
* gnu/packages/bioconductor.scm (r-genomation): Update to 1.24.0.
[propagated-inputs]: Remove r-runit.
 2021-06-05 09:12:43 +02:00
Ricardo Wurmus
3c024e9e96 gnu: r-geneoverlap: Update to 1.28.0. 
* gnu/packages/bioconductor.scm (r-geneoverlap): Update to 1.28.0.
 2021-06-05 09:12:42 +02:00
Ricardo Wurmus
389ce4e42b gnu: r-genefilter: Update to 1.74.0. 
* gnu/packages/bioconductor.scm (r-genefilter): Update to 1.74.0.
 2021-06-05 09:12:42 +02:00
Ricardo Wurmus
f22f4caa69 gnu: r-gage: Update to 2.42.0. 
* gnu/packages/bioconductor.scm (r-gage): Update to 2.42.0.
 2021-06-05 09:12:42 +02:00
Ricardo Wurmus
ff59b34dc3 gnu: r-fastseg: Update to 1.38.0. 
* gnu/packages/bioconductor.scm (r-fastseg): Update to 1.38.0.
 2021-06-05 09:12:42 +02:00
Ricardo Wurmus
6abbb53c3e gnu: r-ensembldb: Update to 2.16.0. 
* gnu/packages/bioconductor.scm (r-ensembldb): Update to 2.16.0.
 2021-06-05 09:12:42 +02:00
Ricardo Wurmus
bdc1b908d3 gnu: r-edger: Update to 3.34.0. 
* gnu/packages/bioconductor.scm (r-edger): Update to 3.34.0.
 2021-06-05 09:12:42 +02:00
Ricardo Wurmus
f998c95d60 gnu: r-edaseq: Update to 2.26.0. 
* gnu/packages/bioconductor.scm (r-edaseq): Update to 2.26.0.
 2021-06-05 09:12:42 +02:00
Ricardo Wurmus
30ce1f9b66 gnu: r-dirichletmultinomial: Update to 1.34.0. 
* gnu/packages/bioconductor.scm (r-dirichletmultinomial): Update to 1.34.0.
 2021-06-05 09:12:42 +02:00
Ricardo Wurmus
e9445cdd78 gnu: r-dexseq: Update to 1.38.0. 
* gnu/packages/bioconductor.scm (r-dexseq): Update to 1.38.0.
 2021-06-05 09:12:42 +02:00
Ricardo Wurmus
45225c60cc gnu: r-deseq2: Update to 1.32.0. 
* gnu/packages/bioconductor.scm (r-deseq2): Update to 1.32.0.
 2021-06-05 09:12:42 +02:00
Ricardo Wurmus
2835e7c0be gnu: r-copywriter: Update to 2.24.0. 
* gnu/packages/bioconductor.scm (r-copywriter): Update to 2.24.0.
 2021-06-05 09:12:42 +02:00
Ricardo Wurmus
a8cfce4852 gnu: r-complexheatmap: Update to 2.8.0. 
* gnu/packages/bioconductor.scm (r-complexheatmap): Update to 2.8.0.
[propagated-inputs]: Remove r-s4vectors; add r-doparallel and r-foreach.
 2021-06-05 09:12:42 +02:00
Ricardo Wurmus
d296ac9cde gnu: r-chipseq: Update to 1.42.0. 
* gnu/packages/bioconductor.scm (r-chipseq): Update to 1.42.0.
 2021-06-05 09:12:42 +02:00
Ricardo Wurmus
ca10bafc65 gnu: r-chipseeker: Update to 1.28.3. 
* gnu/packages/bioconductor.scm (r-chipseeker): Update to 1.28.3.
[inputs]: Remove r-knitr.
[native-inputs]: Add r-knitr.
 2021-06-05 09:12:42 +02:00
Ricardo Wurmus
336107c13d gnu: r-category: Update to 2.58.0. 
* gnu/packages/bioconductor.scm (r-category): Update to 2.58.0.
 2021-06-05 09:12:42 +02:00
Ricardo Wurmus
e039d07bf8 gnu: r-bsgenome: Update to 1.60.0. 
* gnu/packages/bioconductor.scm (r-bsgenome): Update to 1.60.0.
 2021-06-05 09:12:42 +02:00
Ricardo Wurmus
98f3c55999 gnu: r-biovizbase: Update to 1.40.0. 
* gnu/packages/bioconductor.scm (r-biovizbase): Update to 1.40.0.
 2021-06-05 09:12:42 +02:00
Ricardo Wurmus
16fe6abd27 gnu: r-biostrings: Update to 2.60.0. 
* gnu/packages/bioconductor.scm (r-biostrings): Update to 2.60.0.
[propagated-inputs]: Add r-genomeinfodb.
 2021-06-05 09:12:42 +02:00
Ricardo Wurmus
3eedef80e4 gnu: r-biocparallel: Update to 1.26.0. 
* gnu/packages/bioconductor.scm (r-biocparallel): Update to 1.26.0.
 2021-06-05 09:12:41 +02:00
Ricardo Wurmus
f9ae0a4102 gnu: r-biomart: Update to 2.48.0. 
* gnu/packages/bioconductor.scm (r-biomart): Update to 2.48.0.
[propagated-inputs]: Remove r-openssl and r-xml2; add r-digest.
 2021-06-05 09:12:41 +02:00
Ricardo Wurmus
8be5d4f6fc gnu: r-biobase: Update to 2.52.0. 
* gnu/packages/bioconductor.scm (r-biobase): Update to 2.52.0.
 2021-06-05 09:12:41 +02:00
Ricardo Wurmus
baaed6fd68 gnu: r-bamsignals: Update to 1.24.0. 
* gnu/packages/bioconductor.scm (r-bamsignals): Update to 1.24.0.
 2021-06-05 09:12:41 +02:00
Ricardo Wurmus
3e290768c6 gnu: r-aroma-light: Update to 3.22.0. 
* gnu/packages/bioconductor.scm (r-aroma-light): Update to 3.22.0.
 2021-06-05 09:12:41 +02:00
Ricardo Wurmus
2071ed58d5 gnu: r-annotationhub: Update to 3.0.0. 
* gnu/packages/bioconductor.scm (r-annotationhub): Update to 3.0.0.
 2021-06-05 09:12:41 +02:00
Ricardo Wurmus
4d13cf066d gnu: r-annotationforge: Update to 1.34.0. 
* gnu/packages/bioconductor.scm (r-annotationforge): Update to 1.34.0.
 2021-06-05 09:12:41 +02:00
Ricardo Wurmus
361f2f647a gnu: r-annotationfilter: Update to 1.16.0. 
* gnu/packages/bioconductor.scm (r-annotationfilter): Update to 1.16.0.
 2021-06-05 09:12:41 +02:00
Ricardo Wurmus
c7811ed4bf gnu: r-annotationdbi: Update to 1.54.0. 
* gnu/packages/bioconductor.scm (r-annotationdbi): Update to 1.54.0.
[propagated-inputs]: Add r-keggrest.
 2021-06-05 09:12:41 +02:00