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141,149 Commits 73 Branches 40 Tags
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129608 Commits

Author SHA1 Message Date
jgart
4b011ee4ab gnu: trealla: Update to 2.55.26. 
* gnu/packages/prolog.scm (trealla): Update to 2.55.26.

Change-Id: I2a2652d2415d007fabf8974212cd35686336905f
 2024-08-26 10:33:28 -05:00
jgart
714cbc84cf gnu: trealla: Update to 2.55.25. 
* gnu/packages/prolog.scm (trealla): Update to 2.55.25.

Change-Id: I3c00edc6292c9e351ff514d3ca835236aa6c1d7e
 2024-08-26 10:33:28 -05:00
Ricardo Wurmus
e6e3f185ac gnu: r-hmmcopy: Update to 1.46.0. 
* gnu/packages/bioconductor.scm (r-hmmcopy): Update to 1.46.0.

Change-Id: I26c091fe4af549b01c98aac0a1fcdb058ff4ea71
 2024-08-26 14:14:07 +02:00
Spencer King
257375d36b gnu: Add r-hmmcopy. 
* gnu/packages/bioconductor.scm (r-hmmcopy): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
Change-Id: Iface547e865609427c356277edc904f3aec386d8
 2024-08-26 14:13:56 +02:00
Spencer King
7578bf8457 gnu: Add r-fuzzyjoin. 
* gnu/pacakges/cran.scm (r-fuzzyjoin): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
Change-Id: I47fd35ac4759c8c9cceaac32a5b78c2306404903
 2024-08-26 12:24:59 +02:00
Ricardo Wurmus
b70de89f21 gnu: r-omnipathr: Update to 3.12.3. 
* gnu/packages/bioconductor.scm (r-omnipathr): Update to 3.12.3.

Change-Id: I8ecd13d0d28003bb4ceb54b2c011fe6e8162df66
 2024-08-26 12:17:03 +02:00
Ricardo Wurmus
a7b2b67fbc gnu: r-bgeedb: Update to 2.30.1. 
* gnu/packages/bioconductor.scm (r-bgeedb): Update to 2.30.1.

Change-Id: I31f54552b1e12315657f5bd9b8dbef32f3a20066
 2024-08-26 12:17:03 +02:00
Ricardo Wurmus
77d37e4d9f gnu: r-universalmotif: Update to 1.22.2. 
* gnu/packages/bioconductor.scm (r-universalmotif): Update to 1.22.2.

Change-Id: I71e3f29a2ec4b15fb6758b4b972d17b5d1f502c8
 2024-08-26 12:17:03 +02:00
Ricardo Wurmus
a6d670f289 gnu: r-gdsfmt: Update to 1.40.1. 
* gnu/packages/bioconductor.scm (r-gdsfmt): Update to 1.40.1.

Change-Id: Ib9f585e2e2ad6ebc883a626da2138caffc909613
 2024-08-26 12:17:03 +02:00
Ricardo Wurmus
2474e1e1d7 gnu: r-xcms: Update to 4.2.3. 
* gnu/packages/bioconductor.scm (r-xcms): Update to 4.2.3.

Change-Id: I17355573c0af40aa8b021da3e46a99a9709b411b
 2024-08-26 12:17:02 +02:00
Ricardo Wurmus
0c051d6520 gnu: r-clusterprofiler: Update to 4.12.5. 
* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 4.12.5.

Change-Id: I05468212919db2e385cd4bd604891b7deca4110f
 2024-08-26 12:17:02 +02:00
Ricardo Wurmus
af299323fc gnu: r-dose: Update to 3.30.4. 
* gnu/packages/bioconductor.scm (r-dose): Update to 3.30.4.
[propagated-inputs]: Remove r-hdo-db and r-yulab-utils.

Change-Id: Ia8ed1de853bd80ad4c482667c1b3547b113410ae
 2024-08-26 12:17:02 +02:00
Ricardo Wurmus
bd8e53d39e gnu: r-gosemsim: Update to 2.30.2. 
* gnu/packages/bioconductor.scm (r-gosemsim): Update to 2.30.2.
[propagated-inputs]: Add r-dbi, r-digest, r-httr2, and r-r-utils.

Change-Id: Idb915ec70b79f7464011e94256f68e940d63764f
 2024-08-26 12:17:02 +02:00
Ricardo Wurmus
66904a4109 gnu: r-ensembldb: Update to 2.28.1. 
* gnu/packages/bioconductor.scm (r-ensembldb): Update to 2.28.1.

Change-Id: I8d03eb64092c04e5a05f5371e1d3589a2efcd4f1
 2024-08-26 12:17:02 +02:00
Ricardo Wurmus
018aa1323a gnu: r-dmrcate: Update to 3.0.8. 
* gnu/packages/bioconductor.scm (r-dmrcate): Update to 3.0.8.

Change-Id: I62421e4df317cf33c08bdd4f65221c255d4c2dc7
 2024-08-26 12:17:02 +02:00
King, Spencer
8059adada5 gnu: Add r-shinydisconnect. 
* gnu/packages/cran.scm (r-shinydisconnect): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
Change-Id: Ibf90c8902b6e6e6c45b7bdb921f310f14ac6b803
 2024-08-26 11:39:39 +02:00
Ricardo Wurmus
a2e10e2878 gnu: r-desctools: Update to 0.99.56. 
* gnu/packages/statistics.scm (r-desctools): Update to 0.99.56.

Change-Id: I00956252d699c06408818cced7c0d04e409c61c7
 2024-08-26 11:39:38 +02:00
Ricardo Wurmus
5af4d1537b gnu: r-fdrtool: Update to 1.2.18. 
* gnu/packages/statistics.scm (r-fdrtool): Update to 1.2.18.

Change-Id: I199c8f82b86c1b8cc40f5dffd6c55f1ff4b727e0
 2024-08-26 11:39:38 +02:00
Ricardo Wurmus
304c1f8a93 gnu: r-rcppeigen: Update to 0.3.4.0.2. 
* gnu/packages/statistics.scm (r-rcppeigen): Update to 0.3.4.0.2.

Change-Id: I3f9ddfdeb14da7bd42bd6e46389da2ec11dc9940
 2024-08-26 11:39:38 +02:00
Ricardo Wurmus
ef2e52a922 gnu: r-minqa: Update to 1.2.8. 
* gnu/packages/statistics.scm (r-minqa): Update to 1.2.8.

Change-Id: Ibdf083085acf888be22d807ea77f2b4caf28de44
 2024-08-26 11:39:38 +02:00
Ricardo Wurmus
701ef945df gnu: r-robust: Update to 0.7-5. 
* gnu/packages/statistics.scm (r-robust): Update to 0.7-5.

Change-Id: I14ceb59373e95295b2bb90712258571226f76205
 2024-08-26 11:39:38 +02:00
Ricardo Wurmus
803f295249 gnu: r-rrcov: Update to 1.7-6. 
* gnu/packages/statistics.scm (r-rrcov): Update to 1.7-6.

Change-Id: I21b0a480e840999d554dfce503a1e2e9137ea455
 2024-08-26 11:39:38 +02:00
Ricardo Wurmus
5efce1833e gnu: r-pcapp: Update to 2.0-5. 
* gnu/packages/statistics.scm (r-pcapp): Update to 2.0-5.

Change-Id: I4b4ee28b6777e41fc200e8bad748444b7a34f0e8
 2024-08-26 11:39:38 +02:00
Ricardo Wurmus
5faeac1abb gnu: r-robustbase: Update to 0.99-4. 
* gnu/packages/statistics.scm (r-robustbase): Update to 0.99-4.

Change-Id: I98104ac5700de8e50fcd8dcbcf0745845c809a9e
 2024-08-26 11:39:38 +02:00
Ricardo Wurmus
0c41f19ef6 gnu: r-fastica: Update to 1.2-5.1. 
* gnu/packages/statistics.scm (r-fastica): Update to 1.2-5.1.

Change-Id: I379e9cb4f704e4c8187152762d65f034fd42bf5a
 2024-08-26 11:39:38 +02:00
Ricardo Wurmus
4c60a9d5c2 gnu: r-rann: Update to 2.6.2. 
* gnu/packages/statistics.scm (r-rann): Update to 2.6.2.

Change-Id: I4be5c6a4f63f5bd572d8b35637ee68c65c89a428
 2024-08-26 11:39:38 +02:00
Ricardo Wurmus
09a6994e38 gnu: r-sfsmisc: Update to 1.1-19. 
* gnu/packages/statistics.scm (r-sfsmisc): Update to 1.1-19.

Change-Id: Ie8c3682f4b0bf2cc98de7753b0cbed82f6303b48
 2024-08-26 11:39:38 +02:00
Ricardo Wurmus
01e18de27d gnu: r-mvtnorm: Update to 1.2-6. 
* gnu/packages/statistics.scm (r-mvtnorm): Update to 1.2-6.

Change-Id: I49def37b078afadc47aaba571fd6ee6a2399f09c
 2024-08-26 11:39:38 +02:00
Ricardo Wurmus
bc99d00db3 gnu: r-rmarkdown: Update to 2.28. 
* gnu/packages/statistics.scm (r-rmarkdown): Update to 2.28.

Change-Id: Id76c14ee9db4e49ecafe5fe0f5e45c0212ad1333
 2024-08-26 11:39:38 +02:00
Ricardo Wurmus
1f312e5275 gnu: r-digest: Update to 0.6.37. 
* gnu/packages/statistics.scm (r-digest): Update to 0.6.37.

Change-Id: I9445786cc703d704c36cf6c56d06cb53f23505cc
 2024-08-26 11:39:38 +02:00
Ricardo Wurmus
0449398eb6 gnu: r-paws-common: Update to 0.7.5. 
* gnu/packages/cran.scm (r-paws-common): Update to 0.7.5.

Change-Id: I074d17393bd5ec5bf4ecd860ac0ab0f08bfada04
 2024-08-26 11:39:38 +02:00
Ricardo Wurmus
3e22e504d2 gnu: r-opencpu: Update to 2.2.13. 
* gnu/packages/cran.scm (r-opencpu): Update to 2.2.13.

Change-Id: Ia783a7a278852a5bc0136f015624b1c0283a3ac3
 2024-08-26 11:39:38 +02:00
Ricardo Wurmus
e07bd70350 gnu: r-webutils: Update to 1.2.1. 
* gnu/packages/cran.scm (r-webutils): Update to 1.2.1.

Change-Id: I680a8ecb149289581ef3cf53fab575b5036191b2
 2024-08-26 11:39:38 +02:00
Ricardo Wurmus
d8d3141b9b gnu: r-intervals: Update to 0.15.5. 
* gnu/packages/cran.scm (r-intervals): Update to 0.15.5.

Change-Id: I587ce6595d3d06177a05f7c719996a6977e09aed
 2024-08-26 11:39:38 +02:00
Ricardo Wurmus
44dc561376 gnu: r-maldiquant: Update to 1.22.3. 
* gnu/packages/cran.scm (r-maldiquant): Update to 1.22.3.

Change-Id: I4a08996f8df6d0c746636cfbdbe9fcbaf234749d
 2024-08-26 11:39:38 +02:00
Ricardo Wurmus
99897a70e3 gnu: r-qtl: Update to 1.70. 
* gnu/packages/cran.scm (r-qtl): Update to 1.70.

Change-Id: Ic181aaa70c5396e3057ef838a235d36ed19bc31e
 2024-08-26 11:39:38 +02:00
Ricardo Wurmus
fddaaba285 gnu: r-hunspell: Update to 3.0.4. 
* gnu/packages/cran.scm (r-hunspell): Update to 3.0.4.

Change-Id: Id818aece69eae53bc83b1a14a881a028bb4b5951
 2024-08-26 11:39:38 +02:00
Ricardo Wurmus
230df70376 gnu: r-flexsurv: Update to 2.3.2. 
* gnu/packages/cran.scm (r-flexsurv): Update to 2.3.2.

Change-Id: Ia38e29f6fbdafa6e0834bc9d46f7a99e0491c65d
 2024-08-26 11:39:38 +02:00
Ricardo Wurmus
1aa52a00ff gnu: r-spatstat-utils: Update to 3.1-0. 
* gnu/packages/cran.scm (r-spatstat-utils): Update to 3.1-0.

Change-Id: I2a363b32aee2fa9fc21af493ce6758144833f8bd
 2024-08-26 11:39:38 +02:00
Ricardo Wurmus
133ec75cd3 gnu: r-spatstat-explore: Update to 3.3-2. 
* gnu/packages/cran.scm (r-spatstat-explore): Update to 3.3-2.

Change-Id: Ied82693302bf66b32e24becc71521a4886408118
 2024-08-26 11:39:38 +02:00
Ricardo Wurmus
0f925a2c71 gnu: r-bdgraph: Update to 2.73. 
* gnu/packages/cran.scm (r-bdgraph): Update to 2.73.

Change-Id: I79671b10863b7f24953a7cd410f237297c623f7f
 2024-08-26 11:39:38 +02:00
Ricardo Wurmus
975fde0174 gnu: r-openmx: Update to 2.21.12. 
* gnu/packages/cran.scm (r-openmx): Update to 2.21.12.

Change-Id: I7aee12e733193f4b63fce6149c055dd308a5d920
 2024-08-26 11:39:38 +02:00
Ricardo Wurmus
99cc35df8b gnu: r-poibin: Update to 1.6. 
* gnu/packages/cran.scm (r-poibin): Update to 1.6.

Change-Id: I697841e0d5baf8ef175316f32261438547186467
 2024-08-26 11:39:38 +02:00
Ricardo Wurmus
f716ce267a gnu: r-caretensemble: Update to 4.0.0. 
* gnu/packages/cran.scm (r-caretensemble): Update to 4.0.0.
[propagated-inputs]: Remove r-digest, r-gridextra, and r-plyr; add r-patchwork and r-rlang.

Change-Id: I3eccdbc246084030d767451996d9ef70276247e8
 2024-08-26 11:39:38 +02:00
Ricardo Wurmus
69efbb87ed gnu: r-yulab-utils: Update to 0.1.6. 
* gnu/packages/cran.scm (r-yulab-utils): Update to 0.1.6.
[propagated-inputs]: Remove r-memoise; add r-httr2.

Change-Id: Id3b1958a6eddd3ea2dbc6f5f3e844388220b06d5
 2024-08-26 11:39:38 +02:00
Ricardo Wurmus
722dbab7ba gnu: r-rms: Update to 6.8-2. 
* gnu/packages/cran.scm (r-rms): Update to 6.8-2.

Change-Id: I75e83272049235815680e32cc0a05efccd1b417f
 2024-08-26 11:39:38 +02:00
Ricardo Wurmus
f5986798fb gnu: r-gmp: Update to 0.7-5. 
* gnu/packages/cran.scm (r-gmp): Update to 0.7-5.

Change-Id: I874e46d94cfb9ec9c0d9a12a17dd70e488a91b2b
 2024-08-26 11:39:38 +02:00
Ricardo Wurmus
9b5f3cc36d gnu: r-stabledist: Update to 0.7-2. 
* gnu/packages/cran.scm (r-stabledist): Update to 0.7-2.

Change-Id: Ic046fcf71118c9050d427de24ce147e04542c9ae
 2024-08-26 11:39:37 +02:00
Ricardo Wurmus
0a1e2f0eda gnu: r-biocmanager: Update to 1.30.24. 
* gnu/packages/cran.scm (r-biocmanager): Update to 1.30.24.

Change-Id: Ie55c896b11b7c364dbbfd80327722c7ab0d0851d
 2024-08-26 11:39:37 +02:00
Ricardo Wurmus
2246bf641f gnu: r-ncdf4: Update to 1.23. 
* gnu/packages/cran.scm (r-ncdf4): Update to 1.23.

Change-Id: I252696f5208b6fe8127393aed40b815924e23296
 2024-08-26 11:39:37 +02:00