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160,612 Commits 75 Branches 40 Tags
646fef769d995122cca8f2aa2c82fa4cd32fb609
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148462 Commits

Author SHA1 Message Date
Ricardo Wurmus
646fef769d gnu: r-tximeta: Update to 1.26.1. 
* gnu/packages/bioconductor.scm (r-tximeta): Update to 1.26.1.

Change-Id: I19ae8a59fd8f58facc9302a15348d9649607fb88
 2025-05-21 15:21:24 +02:00
Ricardo Wurmus
eb9877c6aa gnu: r-biocpkgtools: Update to 1.26.2. 
* gnu/packages/bioconductor.scm (r-biocpkgtools): Update to 1.26.2.

Change-Id: I4efe3710c67f69d8a3b611d20d4e7a7f1b1d0788
 2025-05-21 15:21:24 +02:00
Ricardo Wurmus
8e03e9b424 gnu: r-scrapper: Update to 1.2.1. 
* gnu/packages/bioconductor.scm (r-scrapper): Update to 1.2.1.

Change-Id: I94f117b6544bac4ac65cd8107841f838efb7c7e3
 2025-05-21 15:21:24 +02:00
Ricardo Wurmus
7fe4561c8e gnu: r-msnbase: Update to 2.34.1. 
* gnu/packages/bioconductor.scm (r-msnbase): Update to 2.34.1.

Change-Id: I18d4762867bfc287601e56789215bb91b5bf0d5f
 2025-05-21 15:21:24 +02:00
Ricardo Wurmus
d504ec95ef gnu: r-metabocoreutils: Update to 1.16.1. 
* gnu/packages/bioconductor.scm (r-metabocoreutils): Update to 1.16.1.

Change-Id: I8508fa80073cb950cdecd6b2394cb74740c004e0
 2025-05-21 15:21:24 +02:00
Ricardo Wurmus
d307bd16c3 gnu: r-biocmake: Update to 1.0.1. 
* gnu/packages/bioconductor.scm (r-biocmake): Update to 1.0.1.

Change-Id: I7144aec43cb3749f659d4ff8325e947193038d62
 2025-05-21 15:21:24 +02:00
Ricardo Wurmus
a16247066f gnu: Add cable. 
* gnu/packages/audio.scm (cable): New variable.

Change-Id: Ia6d5191eac4aab281d714c025b949c49043ddcf5
 2025-05-21 15:21:24 +02:00
Ricardo Wurmus
b430cb1c78 gnu: r-anpan: Update to 0.3.0-1.efd4dc4. 
* gnu/packages/bioinformatics.scm (r-anpan): Update to 0.3.0-1.efd4dc4.
[properties]: Record updater-extra-native-inputs.
[propagated-inputs]: Add r-cli; remove r-mass.

Change-Id: I60ea7dae8974df81b0188164568de2fe930d1fc4
 2025-05-21 15:21:23 +02:00
Ricardo Wurmus
2df2d98fe8 gnu: r-dygraphs: Use minify build system. 
* gnu/packages/cran.scm (r-dygraphs)[arguments]: Reuse minify-build-system
phase.
[native-inputs]: Replace node-uglify-js with esbuild.

Change-Id: If031d3faa25673ee849ca89f1db911aed7cb8b9a
 2025-05-21 15:21:23 +02:00
Ricardo Wurmus
19c184f37c gnu: Add python-jack-client. 
* gnu/packages/audio.scm (python-jack-client): New variable.

Change-Id: I7ce11a7b00e2c5f56ea68324737b288a7193554e
 2025-05-21 15:21:23 +02:00
Sergey Trofimov
11bc17c409 home: services: Build "files" union allowing dangling symlinks. 
* gnu/home/services.scm (files->files-directory): Build file union
without checking for existence of included items.

* tests/guix-home.sh: Verify symlinking files out of store works.

Change-Id: I94054003f4a6be944252ce7a397cf56f0b979554
Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
 2025-05-21 08:05:27 +09:00
Divya Ranjan
93e74686ea gnu: mupdf: Update to 1.26.0. 
* gnu/packages/pdf.scm (mupdf): Update to 1.26.0.
[arguments] <#:make-flags>: Remove USE_SYSTEM_BROTLI=no.
[inputs]: Add brotli.

Change-Id: I2c09e4c1aded109dbec810be9a40b5916c365743
Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
Modified-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
 2025-05-21 08:05:27 +09:00
Maxim Cournoyer
9a186090df gnu: Remove mupdf-1.24. 
* gnu/packages/pdf.scm (mupdf-1.24): Delete variable.

Change-Id: Ic6d607253cf704a9dd09b517b0916a9b433b1be9
 2025-05-21 08:05:27 +09:00
Maxim Cournoyer
21aa23d514 gnu: sioyek: Build with current mupdf. 
* gnu/packages/pdf.scm (sioyek) [inputs]: Replace mupdf-1.24 with mupdf.

Change-Id: I6fbc18f61db8efdc7fbd1f3d1561f84480cb9104
 2025-05-21 08:05:27 +09:00
Sergey Trofimov
7ece7095e9 gnu: elogind: Adjust patch for pkttyagent. 
* gnu/packages/freedesktop.scm (elogind/fixed): New variable.
(elogind): Replace with elogind/fixed.

Change-Id: I9c474291816aee7464db5cbe9398b589479e79cf
Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
Modified-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
 2025-05-21 08:05:27 +09:00
Danny Milosavljevic
28b2b7e6d7 Revert "gnu: rust-gix-path: Update to 0.10.18." 
This reverts commit 2837dee1f2.
 2025-05-20 18:40:08 +02:00
Danny Milosavljevic
023b815b62 Revert "gnu: rust-gix-trace: Update to 0.1.12." 
This reverts commit f2303dac31.
 2025-05-20 18:40:08 +02:00
Danny Milosavljevic
cbef21fd6d Revert "gnu: rust-gix-sec: Update to 0.10.12." 
This reverts commit 33b4ed0eb7.
 2025-05-20 18:40:08 +02:00
Danny Milosavljevic
696da370b0 Revert "gnu: rust-gix-utils: Update to 0.1.14." 
This reverts commit eb7edfb476.
 2025-05-20 18:40:08 +02:00
Danny Milosavljevic
26adecbebc Revert "gnu: rust-gix-validate: Update to 0.9.4." 
This reverts commit 38db96c0fe.
 2025-05-20 18:40:08 +02:00
jgart
b51bb28993 gnu: trealla: Update to 2.71.24. 
* gnu/packages/prolog.scm (trealla): Update to 2.71.24.

Change-Id: I2cd133c08f9ff4a54b11db3b3d098096ce4d2872
 2025-05-20 10:05:24 -05:00
Danny Milosavljevic
93c947ea28 Revert "gnu: rust-cargo-lock: Update to 10.1.0." 
This reverts commit ec735a825a.
 2025-05-20 14:40:27 +02:00
Danny Milosavljevic
aff76fa505 Revert "gnu: rust-bstr: Update to 1.12.0." 
This reverts commit 72499e95ea.
 2025-05-20 14:40:25 +02:00
Danny Milosavljevic
191419214e Revert "gnu: rust-once-cell: Update to 1.21.3." 
This reverts commit 9f0ee362dc.
 2025-05-20 14:40:22 +02:00
Danny Milosavljevic
d532afb213 Revert "gnu: rust-cargo-metadata: Update to 0.19.2." 
This reverts commit e7d73a08d5.
 2025-05-20 14:40:17 +02:00
Mark H Weaver
4d8d8c1c51 gnu: icecat: Update to 115.23.1-guix1 [security fixes]. 
Includes fixes for CVE-2025-4918 and CVE-2025-4919.

* gnu/packages/gnuzilla.scm (%icecat-base-version, %icecat-build-id): Update.
(icecat-source): Update gnuzilla commit, base version, and hashes.
 2025-05-20 06:17:46 -04:00
Danny Milosavljevic
e7d73a08d5 gnu: rust-cargo-metadata: Update to 0.19.2. 
* gnu/packages/crates-io.scm (rust-cargo-metadata-0.19): Update to 0.19.2.

Change-Id: Ie33831621f90ab6e7bb043a2fbff7801dc7c5b77
 2025-05-20 01:32:13 +02:00
Danny Milosavljevic
a1e6a82cfd gnu: Add rust-line-span@0.1.5. 
* gnu/packages/crates-io.scm (rust-line-span-0.1): New variable.

Change-Id: I184da570df4c81d8f3eebc3a1f27536e727d0842
 2025-05-20 01:29:20 +02:00
Danny Milosavljevic
9ae2bd1b92 gnu: Add rust-pdb@0.8.0. 
* gnu/packages/crates-windows.scm (rust-pdb-0.8): New variable.

Change-Id: Ice00ad6acf37bbadb9aaf674dcfa67b9ddc8b86a
 2025-05-20 01:26:28 +02:00
Danny Milosavljevic
08a94e69f3 gnu: Add rust-cargo-platform@0.2.0. 
* gnu/packages/crates-io.scm (rust-cargo-platform-0.2): New variable.

Change-Id: I838f4ffc2a386dc22d983ee3da418a8da6570c85
 2025-05-20 01:19:06 +02:00
Danny Milosavljevic
38db96c0fe gnu: rust-gix-validate: Update to 0.9.4. 
* gnu/packages/crates-vcs.scm (rust-gix-validate-0.9): Update to 0.9.4.

Change-Id: I0153892541cddc79de5088cafd83bc3d477b6f1c
 2025-05-20 01:17:05 +02:00
Danny Milosavljevic
eb7edfb476 gnu: rust-gix-utils: Update to 0.1.14. 
* gnu/packages/crates-vcs.scm (rust-gix-utils): Update to 0.1.14.

Change-Id: I1e38c8e7dbaf7b02957228c056d94a6e7b0261f2
 2025-05-20 01:17:05 +02:00
Danny Milosavljevic
33b4ed0eb7 gnu: rust-gix-sec: Update to 0.10.12. 
* gnu/packages/crates-vcs.scm (rust-gix-sec): Update to 0.10.12.

Change-Id: Ib5580aad7f1b5a3df177835ce349290b936790f7
 2025-05-20 01:17:05 +02:00
Danny Milosavljevic
f2303dac31 gnu: rust-gix-trace: Update to 0.1.12. 
* gnu/packages/crates-vcs.scm (rust-gix-trace-0.1): Update to 0.1.12.
[home-page]: Update.

Change-Id: I3c671c47087729e2e7877803f9477bedc85e402c
 2025-05-20 01:10:17 +02:00
Danny Milosavljevic
2837dee1f2 gnu: rust-gix-path: Update to 0.10.18. 
* gnu/packages/crates-vcs.scm (rust-gix-path): Update to 0.10.18.
[arguments]<#:cargo-inputs>: Add rust-gix-validate-0.10.
<#:cargo-development-inputs>: Update rust-windows to 0.61, rust-winreg to 0.55.

Change-Id: I84b33025c9ae054265fd536fa3a3fc9f5ade1370
 2025-05-20 01:10:17 +02:00
Danny Milosavljevic
b145e898ba gnu: Add rust-winreg@0.55.0. 
* gnu/packages/crates-windows.scm (rust-winreg-0.55): New variable.

Change-Id: Ia61b776deb5a84d2aa6d463364ae756868eefac2
 2025-05-20 01:10:17 +02:00
Danny Milosavljevic
4b9c689ab5 gnu: Add rust-windows-strings@0.4.2. 
* gnu/packages/crates-windows.scm (rust-windows-strings-0.4): New variable.

Change-Id: Idab533d4fb912de3120963b3d40b74317b9ef8f8
 2025-05-20 01:10:17 +02:00
Danny Milosavljevic
02b1e6000a gnu: Add rust-windows-future@0.2.1. 
* gnu/packages/crates-windows.scm (rust-windows-future-0.2): New variable.

Change-Id: I685203daace8b6ecca51c18c7134d74ebbc32209
 2025-05-20 01:10:17 +02:00
Danny Milosavljevic
5d1d97be1c gnu: Add rust-windows-threading@0.1.0. 
* gnu/packages/crates-windows.scm (rust-windows-threading-0.1): New variable.

Change-Id: I44e9a7e306a082f84c0713069c3a5900bcc61d24
 2025-05-20 01:10:16 +02:00
Danny Milosavljevic
5da8c8e275 gnu: Add rust-windows-numerics@0.2.0. 
* gnu/packages/crates-windows.scm (rust-windows-numerics-0.2): New variable.

Change-Id: I98a6e9fb029fe162d3c53d4810746d05bb294484
 2025-05-20 01:10:16 +02:00
Danny Milosavljevic
ac0bc1940d gnu: Add rust-windows-result@0.3.4. 
* gnu/packages/crates-windows.scm (rust-windows-result-0.3): New variable.

Change-Id: I2eccbbd3c6ec95aeec588e0e2973aa961cc057e8
 2025-05-20 01:10:16 +02:00
Danny Milosavljevic
cd04980e53 gnu: Add rust-windows-link@0.1.1. 
* gnu/packages/crates-windows.scm (rust-windows-link-0.1): New variable.

Change-Id: I00a112592234fdadb9f0f550b44e15645ccfb268
 2025-05-20 01:10:16 +02:00
Danny Milosavljevic
623c432965 gnu: Add rust-windows-core@0.61.2. 
* gnu/packages/crates-windows.scm (rust-windows-core-0.61): New variable.

Change-Id: I46b29f484707b08c1775386dd7e779bc00092a7e
 2025-05-20 01:10:16 +02:00
Danny Milosavljevic
b1b82f9eb2 gnu: Add rust-windows-implement@0.60.0. 
* gnu/packages/crates-windows.scm (rust-windows-implement-0.60): New variable.

Change-Id: I14993fd2d0a15779ffbe418a0b3d20e300187707
 2025-05-20 01:10:16 +02:00
Danny Milosavljevic
88b95897ca gnu: Add rust-windows-interface@0.59.1. 
* gnu/packages/crates-windows.scm (rust-windows-interface-0.59): New variable.

Change-Id: I56dd08e68fc68d320d39380424c5d457c5eac590
 2025-05-20 01:10:16 +02:00
Danny Milosavljevic
6e6ee265ee gnu: Add rust-windows@0.61.1. 
* gnu/packages/crates-windows.scm (rust-windows-0.61): New variable.

Change-Id: Ib0f6e925e7e1067bb716e9fddb1836db2af71afe
 2025-05-20 01:10:16 +02:00
Danny Milosavljevic
beb663f063 gnu: Add rust-windows-collections@0.2.0. 
* gnu/packages/crates-windows.scm (rust-windows-collections-0.2): New variable.

Change-Id: I563dd0259511d78f38706d4db1fefd8ae6ffa19e
 2025-05-20 01:10:16 +02:00
Danny Milosavljevic
9f0ee362dc gnu: rust-once-cell: Update to 1.21.3. 
* gnu/packages/crates-io.scm (rust-once-cell): Update to 1.21.3.

Change-Id: I152b3b9b144a3c429fe4884d8d6b835022f71fd5
 2025-05-20 01:10:16 +02:00
Danny Milosavljevic
72499e95ea gnu: rust-bstr: Update to 1.12.0. 
* gnu/packages/crates-io.scm (rust-bstr-1): Update to 1.12.0.

Change-Id: I8605d80df2354008d0183ba23998bf2236128318
 2025-05-20 01:10:16 +02:00
Danny Milosavljevic
ec735a825a gnu: rust-cargo-lock: Update to 10.1.0. 
* gnu/packages/crates-io.scm (rust-cargo-lock-10): Update to 10.1.0.

Change-Id: I5dab78a618a65b1c3bd4d6f858052e1512558fd0
 2025-05-20 01:10:16 +02:00