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Commit Graph

62496 Commits

Author SHA1 Message Date
Guillaume Le Vaillant
689b525db0 gnu: flwrap: Use git repository.
The tarballs of older versions are not kept on the website.

* gnu/packages/radio.scm (flwrap)[source]: Switch to git repository.
  [native-inputs]: Add autoconf and automake.
2021-02-12 14:54:00 +01:00
Guillaume Le Vaillant
224582c54f gnu: flamp: Use git repository.
The tarballs of older versions are not kept on the website.

* gnu/packages/radio.scm (flamp)[source]: Switch to git repository.
  [native-inputs]: Add autoconf and automake.
2021-02-12 14:49:47 +01:00
Guillaume Le Vaillant
9e54963382 gnu: flrig: Use git repository.
The tarballs of older versions are not kept on the website.

* gnu/packages/radio.scm (flrig)[source]: Switch to git repository.
  [native-inputs]: Add autoconf and automake.
2021-02-12 14:41:11 +01:00
Guillaume Le Vaillant
512459f6f6 gnu: fldigi: Update to 4.1.18.
* gnu/packages/radio.scm (fldigi): Update to 4.1.18.
2021-02-12 14:24:54 +01:00
Guillaume Le Vaillant
65e9f13116 gnu: fldigi: Use git repository.
The tarballs of older versions are not kept on the website.
Fixes <https://bugs.gnu.org/46461>.

* gnu/packages/radio.scm (fldigi)[source]: Switch to git repository.
  [native-inputs]: Add autoconf, automake and gettext-minimal.
2021-02-12 14:24:53 +01:00
Tanguy Le Carrour
512c6ea6e9 gnu: python-invoke: Update to 1.5.0.
* gnu/packages/python-xyz.scm (python-invoke): Update to 1.5.0.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2021-02-12 20:15:38 +08:00
Tanguy Le Carrour
adf6380657 gnu: python-invoke: Patch reference to bash.
* gnu/packages/python-xyz.scm (python-invoke)[arguments]: Patch
the reference to 'bash' in the source.
[inputs]: Add bash.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2021-02-12 20:13:31 +08:00
Andreas Enge
9d22c0ca39 gnu: pari-gp: Update to 2.13.1.
* gnu/packages/algebra.scm (pari-gp): Update to 2.13.1.
2021-02-12 12:13:10 +01:00
Leo Prikler
fb3b4ffbb7 gnu: Fix indentation in OpenJDK packages.
* gnu/packages/java.scm (openjdk9, openjdk10, openjdk11, openjdk12)
(openjdk13, openjdk14): Untabify and indent with Emacs.
2021-02-12 11:40:10 +01:00
Björn Höfling
44425e1f2a gnu: openjdk@11: Add phase to hardcode libraries.
This fixes a NullPointerException related to using fontconfig,
see also <https://bugs.gnu.org/41177>.

* gnu/packages/java.scm (openjdk11)[arguments]: Add patch-jni-libs phase.

Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
2021-02-12 11:40:10 +01:00
Björn Höfling
84805ef205 gnu: openjdk@9 : Add phase to hardcode libraries.
This fixes a NullPointerException related to using fontconfig,
see also <https://bugs.gnu.org/41177>.

* gnu/packages/java.scm (openjdk9)[arguments]: Add patch-jni-libs phase.

Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
2021-02-12 11:40:07 +01:00
宋文武
15903eaab6 gnu: bpytop: Don't propagated python-psutil.
* gnu/packages/admin.scm (bpytop): Move python-psutil to propagated-inputs.
2021-02-12 17:09:00 +08:00
Zheng Junjie
c84698ef95 gnu: Add xkeysnail.
* gnu/packages/xdisorg.scm (xkeysnail): New variable.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2021-02-12 17:08:02 +08:00
Zheng Junjie
18e79929f1 gnu: Add bpytop.
* gnu/packages/admin.scm (bpytop): New variable.
2021-02-12 16:58:02 +08:00
宋文武
4e96ce4294 gnu: dwl: Fix command name in description.
* gnu/packages/wm.scm (dwl)[description]: Fix typo.
2021-02-12 15:36:40 +08:00
Zheng Junjie
c5f5b356da gnu: Add dwl.
* gnu/packages/wm.scm (dwl): New variable.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2021-02-12 15:34:38 +08:00
Stefan Reichör
8cd181e4d8 gnu: pianobar: Update to 2020.11.28.
* gnu/packages/music.scm (pianobar): Update to 2020.11.28.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2021-02-12 15:24:28 +08:00
raid5atemyhomework
8458d8db70 gnu: zfs: Update to 2.0.3.
* gnu/packages/file-systems.scm (zfs): Update to 2.0.3.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2021-02-12 13:56:38 +08:00
Vagrant Cascadian
f813750a4a gnu: diffoscope: Update to 166.
* gnu/packages/diffoscope.scm (diffoscope): Update to 166.
  [source]: Add patch to use magic.open compatibility interface.
* gnu/packages/patches/diffoscope-revert-to-magic-open.patch: New file.
* gnu/local.mk [dist_patch_DATA]: New patch.
2021-02-11 18:57:38 -08:00
Julien Lepiller
6bf136c890 gnu: opam: Update to 2.0.8.
* gnu/packages/ocaml.scm (opam): Update to 2.0.8.
2021-02-11 23:53:40 +01:00
Nicolas Goaziou
af0e5164b8 gnu: emacs-marginalia: Update to 0.3.
* gnu/packages/emacs-xyz.scm (emacs-marginalia): Update to 0.3.
2021-02-11 23:50:25 +01:00
Nicolas Goaziou
b101d9f651 gnu: emacs-consult: Update to 0.5.
* gnu/packages/emacs-xyz.scm (emacs-consult): Update to 0.5.
2021-02-11 23:48:31 +01:00
Mădălin Ionel Patrașcu
160e4a95e7 gnu: bowtie1: Update to 1.3.0.
* gnu/packages/bioinformatics.scm (bowtie1): Update to 1.3.0.
[arguments]: Set CC in make flags.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2021-02-11 22:29:37 +01:00
Ricardo Wurmus
0e3e26ca60 gnu: r-gage: Update to 2.40.1.
* gnu/packages/bioinformatics.scm (r-gage): Update to 2.40.1.
2021-02-11 21:33:38 +01:00
Ricardo Wurmus
5103da059a gnu: r-msnbase: Update to 2.16.1.
* gnu/packages/bioinformatics.scm (r-msnbase): Update to 2.16.1.
2021-02-11 21:33:38 +01:00
Ricardo Wurmus
2596200514 gnu: r-methylkit: Update to 1.16.1.
* gnu/packages/bioinformatics.scm (r-methylkit): Update to 1.16.1.
2021-02-11 21:33:38 +01:00
Ricardo Wurmus
3f7e96acc7 gnu: r-delayedarray: Update to 0.16.1.
* gnu/packages/bioinformatics.scm (r-delayedarray): Update to 0.16.1.
2021-02-11 21:33:38 +01:00
Ricardo Wurmus
9b66b8017d gnu: r-biomart: Update to 2.46.3.
* gnu/packages/bioinformatics.scm (r-biomart): Update to 2.46.3.
2021-02-11 21:33:38 +01:00
Ricardo Wurmus
8e25b1acf9 gnu: r-edger: Update to 3.32.1.
* gnu/packages/bioinformatics.scm (r-edger): Update to 3.32.1.
2021-02-11 21:33:38 +01:00
Ricardo Wurmus
809f725977 gnu: r-iranges: Update to 2.24.1.
* gnu/packages/bioinformatics.scm (r-iranges): Update to 2.24.1.
2021-02-11 21:33:37 +01:00
Ricardo Wurmus
88fd569ddf gnu: r-s4vectors: Update to 0.28.1.
* gnu/packages/bioinformatics.scm (r-s4vectors): Update to 0.28.1.
2021-02-11 21:33:37 +01:00
Ricardo Wurmus
babb2dce34 gnu: r-systempiper: Update to 1.24.3.
* gnu/packages/bioinformatics.scm (r-systempiper): Update to 1.24.3.
2021-02-11 21:33:37 +01:00
Ricardo Wurmus
d3ac91dd9d gnu: r-gseabase: Update to 1.52.1.
* gnu/packages/bioinformatics.scm (r-gseabase): Update to 1.52.1.
2021-02-11 21:33:37 +01:00
Ricardo Wurmus
074d142ab6 gnu: r-genefilter: Update to 1.72.1.
* gnu/packages/bioinformatics.scm (r-genefilter): Update to 1.72.1.
2021-02-11 21:33:37 +01:00
Ricardo Wurmus
311bb4bc3d gnu: r-delayedmatrixstats: Update to 1.12.3.
* gnu/packages/bioconductor.scm (r-delayedmatrixstats): Update to 1.12.3.
2021-02-11 21:33:37 +01:00
Ricardo Wurmus
8acfd9f3d4 gnu: r-sparsematrixstats: Update to 1.2.1.
* gnu/packages/bioconductor.scm (r-sparsematrixstats): Update to 1.2.1.
2021-02-11 21:33:37 +01:00
Ricardo Wurmus
de4fc49270 gnu: r-scran: Update to 1.18.5.
* gnu/packages/bioconductor.scm (r-scran): Update to 1.18.5.
2021-02-11 21:33:37 +01:00
Ricardo Wurmus
cf3e703820 gnu: r-scuttle: Update to 1.0.4.
* gnu/packages/bioconductor.scm (r-scuttle): Update to 1.0.4.
2021-02-11 21:33:37 +01:00
Ricardo Wurmus
79d51ffeca gnu: r-beachmat: Update to 2.6.4.
* gnu/packages/bioconductor.scm (r-beachmat): Update to 2.6.4.
2021-02-11 21:33:37 +01:00
Ricardo Wurmus
a1357422c3 gnu: r-rhdf5lib: Update to 1.12.1.
* gnu/packages/bioconductor.scm (r-rhdf5lib): Update to 1.12.1.
2021-02-11 21:33:37 +01:00
Ricardo Wurmus
f7947f8991 gnu: r-hdf5array: Update to 1.18.1.
* gnu/packages/bioconductor.scm (r-hdf5array): Update to 1.18.1.
2021-02-11 21:33:37 +01:00
Ricardo Wurmus
18ebacaa1c gnu: r-preprocesscore: Update to 1.52.1.
* gnu/packages/bioconductor.scm (r-preprocesscore): Update to 1.52.1.
2021-02-11 21:33:37 +01:00
Ricardo Wurmus
da109ae738 gnu: r-chemminer: Update to 3.42.1.
* gnu/packages/bioconductor.scm (r-chemminer): Update to 3.42.1.
2021-02-11 21:33:37 +01:00
Ricardo Wurmus
6f37c3ea40 gnu: r-gdsfmt: Update to 1.26.1.
* gnu/packages/bioconductor.scm (r-gdsfmt): Update to 1.26.1.
2021-02-11 21:33:36 +01:00
Ricardo Wurmus
9470f901d9 gnu: r-cytolib: Update to 2.2.1.
* gnu/packages/bioconductor.scm (r-cytolib): Update to 2.2.1.
2021-02-11 21:33:36 +01:00
Ricardo Wurmus
691178d67b gnu: r-multidataset: Update to 1.18.1.
* gnu/packages/bioconductor.scm (r-multidataset): Update to 1.18.1.
2021-02-11 21:33:36 +01:00
Ricardo Wurmus
6d0709231f gnu: r-clusterprofiler: Update to 3.18.1.
* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 3.18.1.
2021-02-11 21:33:36 +01:00
Ricardo Wurmus
ebf9ad7984 gnu: r-enrichplot: Update to 1.10.2.
* gnu/packages/bioconductor.scm (r-enrichplot): Update to 1.10.2.
2021-02-11 21:33:36 +01:00
Ricardo Wurmus
669ea5ab09 gnu: r-matrixgenerics: Update to 1.2.1.
* gnu/packages/bioconductor.scm (r-matrixgenerics): Update to 1.2.1.
2021-02-11 21:33:36 +01:00
Ricardo Wurmus
61609fb88e gnu: r-diffbind: Update to 3.0.13.
* gnu/packages/bioconductor.scm (r-diffbind): Update to 3.0.13.
2021-02-11 21:33:36 +01:00