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12,397 Commits 76 Branches 40 Tags
7febe3a28267c6cc41e499db9171d515c31bc646
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8807 Commits

Author SHA1 Message Date
Leo Famulari
7febe3a282 gnu: grub: Re-enable test. 
* gnu/packages/grub.scm (grub)[arguments]: Re-enable test.
 2016-05-23 18:47:45 -04:00
Leo Famulari
88ac650c7b gnu: vdirsyncer: Update to 0.11.0. 
* gnu/packages/dav.scm (vdirsyncer): Update to 0.11.0.
 2016-05-23 13:26:17 -04:00
Leo Famulari
e1343994b0 gnu: git: Update to 2.8.3. 
* gnu/packages/version-control.scm (git): Update to 2.8.3.
(git-manpages)[source]: Update hash.
 2016-05-23 13:14:50 -04:00
Roel Janssen
031cf6b65e gnu: Add r-zoo. 
* gnu/packages/statistics.scm (r-zoo): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-05-23 12:36:38 -04:00
Leo Famulari
148e8e8e75 gnu: borg: Update to 1.0.3. 
* gnu/packages/backup.scm (borg): Update to 1.0.3.
[source]: Remove pypi-uri.
 2016-05-23 12:27:12 -04:00
Roel Janssen
f22debacb4 gnu: Add poppler-qt5. 
* gnu/packages/pdf.scm (poppler-qt5): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2016-05-23 14:35:23 +03:00
Ricardo Wurmus
524eee0298 gnu: Add slurm-drmaa. 
* gnu/packages/parallel.scm (slurm-drmaa): New variable.
 2016-05-23 12:55:40 +02:00
Ricardo Wurmus
0783787436 gnu: Add ParDRe. 
* gnu/packages/bioinformatics.scm (pardre): New variable.
 2016-05-23 12:55:09 +02:00
Efraim Flashner
624d4e2e6b gnu: gnu-pw-mgr: Update to 2.0. 
* gnu/packages/gnu-pw-mgr.scm (gnu-pw-mgr): Update to 2.0.
 2016-05-22 16:58:21 +03:00
Leo Famulari
13913c52d5 gnu: imagemagick: Update to 6.9.4-4. 
* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.4-4.
 2016-05-22 03:51:57 -04:00
Lukas Gradl
88bb4197c4 gnu: Add python2-rope. 
* gnu/packages/python.scm (python2-rope): New variable.
 2016-05-22 14:19:52 +10:00
Kei Yamashita
3c47489766 gnu: Add gnome-calendar. 
* gnu/packages/gnome.scm (gnome-calendar): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2016-05-21 23:30:37 +02:00
Matthew Jordan
548994142f gnu: Add envstore. 
* gnu/package/shellutils.scm: New file.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2016-05-21 23:30:37 +02:00
Jan Nieuwenhuizen
b9b447be64 gnu: Add sicp. 
* gnu/packages/scheme.scm (sicp): New variable.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
 2016-05-21 23:30:37 +02:00
Roel Janssen
a56be436d0 gnu: Add dia. 
* gnu/packages/gnome.scm (dia): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2016-05-21 23:30:37 +02:00
Mark H Weaver
3c9a7185e4 gnu: linux-libre: Update to 4.5.5. 
* gnu/packages/linux.scm (linux-libre): Update to 4.5.5.
 2016-05-20 18:58:15 -04:00
Mark H Weaver
4483a1185d gnu: linux-libre-4.4: Update to 4.4.11. 
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.11.
 2016-05-20 18:58:06 -04:00
Ricardo Wurmus
987a118334 gnu: Add default gcc-objc++. 
* gnu/packages/gcc.scm (gcc-objc++): New variable.
 2016-05-20 15:19:48 +02:00
Ricardo Wurmus
a5948c0d41 gnu: Add gcc-objc++-4.9. 
* gnu/packages/gcc.scm (gcc-objc++-4.9): New variable.
 2016-05-20 15:19:48 +02:00
Ricardo Wurmus
8b196ad208 gnu: Add default gcc-objc. 
* gnu/packages/gcc.scm (gcc-objc): New variable.
 2016-05-20 15:19:48 +02:00
Ricardo Wurmus
2d69c1616d gnu: Add gcc-objc-4.9. 
* gnu/packages/gcc.scm (gcc-objc-4.9): New variable.
 2016-05-20 15:19:33 +02:00
Ricardo Wurmus
813efdded1 gnu: r-rcpparmadillo: Update to 0.6.700.6.0. 
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.6.700.6.0.
* gnu/packages/maths.scm (armadillo-for-rcpparmadillo): Update to
6.700.6.
 2016-05-20 15:18:23 +02:00
Ricardo Wurmus
945eef85c5 gnu: armadillo: Update to 6.700.7. 
* gnu/packages/maths.scm (armadillo): Update to 6.700.7.
 2016-05-20 15:18:23 +02:00
Ricardo Wurmus
7740f58128 gnu: r-genomation: Update to 1.4.2. 
* gnu/packages/bioinformatics.scm (r-genomation): Update to 1.4.2.
 2016-05-20 15:18:23 +02:00
Ricardo Wurmus
f6225d135c gnu: r-jsonlite: Update to 0.9.20. 
* gnu/packages/web.scm (r-jsonlite): Update to 0.9.20.
 2016-05-20 15:18:23 +02:00
Ricardo Wurmus
c969453e1c gnu: r-plotly: Update to 3.6.0. 
* gnu/packages/statistics.scm (r-plotly): Update to 3.6.0.
 2016-05-20 15:18:23 +02:00
Ricardo Wurmus
95513f284f gnu: r-matrixstats: Update to 0.50.2. 
* gnu/packages/statistics.scm (r-matrixstats): Update to 0.50.2.
 2016-05-20 15:18:23 +02:00
Ricardo Wurmus
b8f6a97ebd gnu: r-r-rsp: Update to 0.30.0. 
* gnu/packages/statistics.scm (r-r-rsp): Update to 0.30.0.
 2016-05-20 15:18:23 +02:00
Ricardo Wurmus
f0c56a2411 gnu: r-rmarkdown: Update to 0.9.6. 
* gnu/packages/statistics.scm (r-rmarkdown): Update to 0.9.6.
 2016-05-20 15:18:23 +02:00
Ricardo Wurmus
2f7ac060ff gnu: r-plotrix: Update to 3.6-2. 
* gnu/packages/statistics.scm (r-plotrix): Update to 3.6-2.
 2016-05-20 15:18:23 +02:00
Ricardo Wurmus
133f27b06a gnu: r-devtools: Update to 1.11.1. 
* gnu/packages/statistics.scm (r-devtools): Update to 1.11.1.
 2016-05-20 15:18:23 +02:00
Ricardo Wurmus
3624ad7150 gnu: r-git2r: Update to 0.15.0. 
* gnu/packages/statistics.scm (r-git2r): Update to 0.15.0.
 2016-05-20 15:18:23 +02:00
Ricardo Wurmus
c1e2c9d41a gnu: r-openssl: Update to 0.9.3. 
* gnu/packages/statistics.scm (r-openssl): Update to 0.9.3.
 2016-05-20 15:18:23 +02:00
Ricardo Wurmus
383f6337a0 gnu: r-testthat: Update to 1.0.2. 
* gnu/packages/statistics.scm (r-testthat): Update to 1.0.2.
 2016-05-20 15:18:23 +02:00
Ricardo Wurmus
1b206aeb00 gnu: r-knitr: Update to 1.13. 
* gnu/packages/statistics.scm (r-knitr): Update to 1.13.
 2016-05-20 15:18:23 +02:00
Ricardo Wurmus
d5130e6345 gnu: r-highr: Update to 0.6. 
* gnu/packages/statistics.scm (r-highr): Update to 0.6.
 2016-05-20 15:18:23 +02:00
Ricardo Wurmus
df25b0048a gnu: r-formatr: Update to 1.4. 
* gnu/packages/statistics.scm (r-formatr): Update to 1.4.
 2016-05-20 15:18:23 +02:00
Ricardo Wurmus
84e5368719 gnu: r-evaluate: Update to 0.9. 
* gnu/packages/statistics.scm (r-evaluate): Update to 0.9.
 2016-05-20 15:18:23 +02:00
Ricardo Wurmus
9a0ccf43cc gnu: r-bh: Update to 1.60.0-2. 
* gnu/packages/statistics.scm (r-bh): Update to 1.60.0-2.
 2016-05-20 15:18:23 +02:00
Ricardo Wurmus
a76b3f6914 gnu: r-dbi: Update to 0.4-1. 
* gnu/packages/statistics.scm (r-dbi): Update to 0.4-1.
 2016-05-20 15:18:23 +02:00
Ricardo Wurmus
eb1a5b65c0 gnu: r-rcpp: Update to 0.12.5. 
* gnu/packages/statistics.scm (r-rcpp): Update to 0.12.5.
 2016-05-20 15:18:23 +02:00
Ricardo Wurmus
8ede249e0a gnu: r-genomicfeatures: Update to 1.24.2. 
* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.24.2.
 2016-05-20 15:18:23 +02:00
Ricardo Wurmus
192e1ea8d1 gnu: r-summarizedexperiment: Update to 1.2.2. 
* gnu/packages/bioinformatics.scm (r-summarizedexperiment): Update to 1.2.2.
 2016-05-20 15:18:23 +02:00
Ricardo Wurmus
d7420566a9 gnu: r-biocparallel: Update to 1.6.2. 
* gnu/packages/bioinformatics.scm (r-biocparallel): Update to 1.6.2.
 2016-05-20 15:18:23 +02:00
Ricardo Wurmus
73af676feb gnu: r-annotationdbi: Update to 1.34.2. 
* gnu/packages/bioinformatics.scm (r-annotationdbi): Update to 1.34.2.
 2016-05-20 15:18:23 +02:00
Ricardo Wurmus
679e670b36 gnu: r-variantannotation: Update to 1.18.1. 
* gnu/packages/bioinformatics.scm (r-variantannotation): Update to 1.18.1.
 2016-05-20 15:18:23 +02:00
Ricardo Wurmus
186ed87337 gnu: r-genomeinfodb: Update to 1.8.1. 
* gnu/packages/bioinformatics.scm (r-genomeinfodb): Update to 1.8.1.
 2016-05-20 15:18:23 +02:00
Leo Famulari
0fc4a8afba gnu: btrfs-progs: Update to 4.5.3. 
* gnu/packages/linux.scm (btrfs-progs): Update to 4.5.3.
 2016-05-19 21:04:22 -04:00
Jelle Licht
0e40755d35 gnu: jemalloc: Update to 4.2.0. 
* gnu/packages/jemalloc.scm (jemalloc): Update to 4.2.0.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2016-05-19 20:43:13 +03:00
Leo Famulari
119b83989d gnu: expat: Fix CVE-2016-0718. Improve fix for CVE-2015-1283. 
* gnu/packages/patches/expat-CVE-2015-1283-refix.patch,
gnu/packages/patches/expat-CVE-2016-0718.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/xml.scm (expat)[replacement]: New field.
(expat/fixed): New variable.
[source]: Use new patches.
 2016-05-19 10:27:18 -04:00