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96d16cd98fc2726d0afad35dfe8c19c7583ff876
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170259 Commits

Author SHA1 Message Date
Ricardo Wurmus
96d16cd98f gnu: r-fuzzyjoin: Update to 0.1.8. 
* gnu/packages/cran.scm (r-fuzzyjoin): Update to 0.1.8.

Change-Id: I3b990302bc25cb8c46c201c3a70dd7aad43b95ac
 2026-03-07 11:57:28 +01:00
Ricardo Wurmus
be7c94bcb3 gnu: r-effects: Update to 4.2-5. 
* gnu/packages/cran.scm (r-effects): Update to 4.2-5.
[native-inputs]: Add r-betareg, r-glmmtmb, r-nlme, and r-ordinal.

Change-Id: Iecafdda6a1442926df579d45034709481c577293
 2026-03-07 11:57:28 +01:00
Ricardo Wurmus
cc6460e9ef gnu: r-ggiraph: Update to 0.9.5. 
* gnu/packages/cran.scm (r-ggiraph): Update to 0.9.5.
[arguments]: Add phase 'set-HOME.
[propagated-inputs]: Move r-xml2 from here...
[native-inputs]: ...to here.

Change-Id: I51d7ec512153f3e9b95c63bc661247b80cef7d70
 2026-03-07 11:57:28 +01:00
Ricardo Wurmus
ba6cc1c2fc gnu: r-flare: Update to 1.8. 
* gnu/packages/cran.scm (r-flare): Update to 1.8.
[native-inputs]: Add r-testthat.

Change-Id: Icbae36640187e2365e6a488e777b631f37dcd45e
 2026-03-07 11:57:28 +01:00
Ricardo Wurmus
88866d490d gnu: r-bb: Update to 2026.1.0. 
* gnu/packages/cran.scm (r-bb): Update to 2026.1.0.
[properties]: Record updater-extra-native-inputs.

Change-Id: I0361ec2a26079d37f916f8690f117c4a352ecc45
 2026-03-07 11:57:28 +01:00
Ricardo Wurmus
8422a6a819 gnu: r-ecosolver: Update to 0.6.1. 
* gnu/packages/cran.scm (r-ecosolver): Update to 0.6.1.
[native-inputs]: Add r-cli.

Change-Id: I3064ae2cb11ff38043a46704e8409b2f08f42321
 2026-03-07 11:57:28 +01:00
Ricardo Wurmus
0741844d93 gnu: r-voltron: Replace custom phase with #:skipped-tests. 
* gnu/packages/bioinformatics.scm (r-voltron)[arguments]: Remove phase
'skip-bad-tests; provide #:skipped-tests argument.

Change-Id: I00ddc80185972d5bf7e01856b8ab0c47ffcf3fd2
 2026-03-07 11:57:27 +01:00
Ricardo Wurmus
90a69aefe0 gnu: r-caretensemble: Replace custom phase with #:skipped-tests. 
* gnu/packages/cran.scm (r-caretensemble)[arguments]: Remove phase
'disable-bad-tests; provide #:skipped-tests argument.

Change-Id: I52908e2bd76c8e7469f645b7da2bc7578be04684
 2026-03-07 11:57:27 +01:00
Ricardo Wurmus
9681cd9c7c gnu: r-lightgbm: Replace custom phase with #:skipped-tests. 
* gnu/packages/cran.scm (r-lightgbm)[arguments]: Remove phase
'disable-bad-tests; provide #:skipped-tests argument.

Change-Id: If43dc4a7baa5f237a8a01416459160acdc989d93
 2026-03-07 11:57:27 +01:00
Ricardo Wurmus
764a5ee76b gnu: r-rvenn: Replace custom phase with #:skipped-tests. 
* gnu/packages/cran.scm (r-rvenn)[arguments]: Remove phase
'skip-bad-tests; provide #:skipped-tests argument.

Change-Id: I4f4fec580c5a26e1083d114e226fc6edf66db3fd
 2026-03-07 11:57:27 +01:00
Ricardo Wurmus
308f1c1cb7 gnu: r-mosaic: Replace custom phase with #:skipped-tests. 
* gnu/packages/cran.scm (r-mosaic)[arguments]: Remove phase
'delete-bad-tests; provide #:skipped-tests argument.

Change-Id: I4585305e3e0281dd678e33cc7597b03c57514dba
 2026-03-07 11:57:27 +01:00
Ricardo Wurmus
492ad617d2 gnu: r-rsconnect: Replace custom phase with #:skipped-tests. 
* gnu/packages/cran.scm (r-rsconnect)[arguments]: Remove phase
'disable-bad-test; provide #:skipped-tests argument.

Change-Id: I77ff5e4f0882e2db0db2637fa0367389a6589c7d
 2026-03-07 11:57:27 +01:00
Ricardo Wurmus
7c2abf053f gnu: r-phangorn: Replace custom phase with #:skipped-tests. 
* gnu/packages/cran.scm (r-phangorn)[arguments]: Remove phase
'disable-bad-test; provide #:skipped-tests argument.

Change-Id: Ia67c1bd17c811a68b235658557d73bed5209429b
 2026-03-07 11:57:27 +01:00
Ricardo Wurmus
22b59fbb0e gnu: r-latex2exp: Replace custom phase with #:skipped-tests. 
* gnu/packages/cran.scm (r-latex2exp)[arguments]: Remove phase
'disable-bad-test; provide #:skipped-tests argument.

Change-Id: I53d97088580d22cccd22ce1337daf759b287caab
 2026-03-07 11:57:27 +01:00
Ricardo Wurmus
b037d56288 gnu: r-glmmtmb: Replace custom phase with #:skipped-tests. 
* gnu/packages/cran.scm (r-glmmtmb)[arguments]: Remove phase
'disable-bad-tests; provide #:skipped-tests argument.

Change-Id: I686851d6f9708c8398338bdfd330b2aee5be11b5
 2026-03-07 11:57:27 +01:00
Ricardo Wurmus
74d0223f01 gnu: r-options: Replace custom phase with #:skipped-tests. 
* gnu/packages/cran.scm (r-options)[arguments]: Remove phase
'disable-bad-tests; provide #:skipped-tests argument.

Change-Id: I77a486511664b373ea5b365ae2ea82c83c53dffd
 2026-03-07 11:57:27 +01:00
Ricardo Wurmus
785f3e5307 gnu: r-seqminer: Replace custom phase with #:skipped-tests. 
* gnu/packages/cran.scm (r-seqminer)[arguments]: Remove phase
'disable-bad-tests; provide #:skipped-tests argument.

Change-Id: Ic2039a9c524567f17bb92fa23a0fc7d1fef5bf4e
 2026-03-07 11:57:26 +01:00
Ricardo Wurmus
5bb61ded37 gnu: r-seqminer: Add missing inputs. 
* gnu/packages/cran.scm (r-seqminer)[inputs]: Add bzip2, sqlite, and zstd:lib.
[properties]: Record updater-extra-inputs.

Change-Id: I3cce94e1368a3376185203b19cbd416ce05ceb44
 2026-03-07 11:57:26 +01:00
Ricardo Wurmus
484f1efbdc gnu: r-arrow: Replace custom phase with #:skipped-tests. 
* gnu/packages/cran.scm (r-arrow)[arguments]: Remove phase
'delete-bad-tests; provide #:skipped-tests argument.

Change-Id: I4a39c72c2b1df2c7d75ac059035490ed79bce3f1
 2026-03-07 11:57:26 +01:00
Ricardo Wurmus
ec87bbbf69 gnu: r-proxyc: Replace custom phase with #:skipped-tests. 
* gnu/packages/cran.scm (r-proxyc)[arguments]: Remove phase
'patch-bad-tests; provide #:skipped-tests argument.

Change-Id: Ic4543f7393b0479415a1e16d1e4f33c813fd3b0b
 2026-03-07 11:57:26 +01:00
Ricardo Wurmus
a496f62ae0 gnu: r-bedr: Replace custom phase with #:skipped-tests. 
* gnu/packages/cran.scm (r-bedr)[arguments]: Remove phase
'skip-bad-tests; provide #:skipped-tests argument.

Change-Id: I5315e8ac3b9766afce682d3b2c479fa1dd318daa
 2026-03-07 11:57:26 +01:00
Ricardo Wurmus
aa23a17d10 gnu: r-data-tree: Replace custom phase with #:skipped-tests. 
* gnu/packages/cran.scm (r-data-tree)[arguments]: Remove phase
'disable-bad-tests; provide #:skipped-tests argument.

Change-Id: Ie862d05fb5554c82fe4a530a3cd9112ab79add91
 2026-03-07 11:57:26 +01:00
Ricardo Wurmus
5574c903f4 gnu: r-bindr: Replace custom phase with #:skipped-tests. 
* gnu/packages/cran.scm (r-bindr)[arguments]: Remove phase
'testthat-compatibility; provide #:skipped-tests argument.

Change-Id: I478791ae7ec8c75f48846a1efe547db6a0de4387
 2026-03-07 11:57:26 +01:00
Ricardo Wurmus
82c6def8f5 gnu: r-flextable: Replace custom phase with #:skipped-tests. 
* gnu/packages/cran.scm (r-flextable)[arguments]: Remove phase
'disable-bad-tests; provide #:skipped-tests argument.

Change-Id: Ia61deb9513b9d24b38aafa0bed231efd5d7cd362
 2026-03-07 11:57:26 +01:00
Ricardo Wurmus
85289d3d7c gnu: r-lintr: Replace custom phase with #:skipped-tests. 
* gnu/packages/cran.scm (r-lintr)[arguments]: Remove phase
'disable-bad-tests; provide #:skipped-tests argument.

Change-Id: I3535002b9e3839b0dfaf6d41a9d7fb646f81c28b
 2026-03-07 11:57:26 +01:00
Ricardo Wurmus
0c7552f717 gnu: r-workflows: Replace custom phase with #:skipped-tests. 
* gnu/packages/cran.scm (r-workflows)[arguments]: Remove phase
'skip-bad-tests; provide #:skipped-tests argument.

Change-Id: I54505f38d20c8cc47166f8902c28b6fde2ecac6e
 2026-03-07 11:57:26 +01:00
Ricardo Wurmus
00200fdefc gnu: r-mi: Enable all tests. 
* gnu/packages/cran.scm (r-mi)[arguments]: Remove phase
'skip-bad-tests.

Change-Id: Idac9524f1cde28361ae74a5b74a0606c854e1c42
 2026-03-07 11:57:26 +01:00
Ricardo Wurmus
c9acc88769 gnu: r-rstpm2: Enable all tests. 
* gnu/packages/cran.scm (r-rstpm2)[arguments]: Remove phase
'disable-bad-tests.

Change-Id: I3b2d9e729620f181951e54ab2d715b48ffaa44a6
 2026-03-07 11:57:25 +01:00
Ricardo Wurmus
272395cd52 gnu: r-trycatchlog: Replace custom phase with #:skipped-tests. 
* gnu/packages/cran.scm (r-trycatchlog)[arguments]: Remove phase
'testthat-compatibility; provide #:skipped-tests argument.

Change-Id: I4579e3c01efb238d1cc59ce59b0a45260f19fb30
 2026-03-07 11:57:25 +01:00
Ricardo Wurmus
7399d58586 gnu: r-bslib: Replace custom phase with #:skipped-tests. 
* gnu/packages/cran.scm (r-bslib)[arguments]: Remove phase
'disable-bad-tests; provide #:skipped-tests argument.

Change-Id: I839cd5c5e0330d0b7e9e77303bf7e4f2a8f61dd4
 2026-03-07 11:57:25 +01:00
Ricardo Wurmus
56e8a87a7b gnu: r-datawizard: Replace custom phase with #:skipped-tests. 
* gnu/packages/cran.scm (r-datawizard)[arguments]: Remove phase
'disable-bad-tests; provide #:skipped-tests argument.

Change-Id: I9f4d5654db714d4bddc295ad3dd51b39b1b4f6d2
 2026-03-07 11:57:25 +01:00
Ricardo Wurmus
63ede74078 gnu: r-ggdist: Replace custom phase with #:skipped-tests. 
* gnu/packages/cran.scm (r-ggdist)[arguments]: Remove phase
'skip-bad-tests; provide #:skipped-tests argument.

Change-Id: I43dd35d5d311e0865ff24163f8bfe39ae1cc24e2
 2026-03-07 11:57:25 +01:00
Ricardo Wurmus
1550831eba gnu: r-tailor: Replace custom phase with #:skipped-tests. 
* gnu/packages/cran.scm (r-tailor)[arguments]: Remove phase
'skip-bad-tests; provide #:skipped-tests argument.

Change-Id: Ie28578f001f94c32d74a98f0ce894b929f434fc3
 2026-03-07 11:57:25 +01:00
Ricardo Wurmus
4498ca3ad5 gnu: r-vcr: Replace custom phase with #:skipped-tests. 
* gnu/packages/cran.scm (r-vcr)[arguments]: Remove phase
'skip-bad-tests; provide #:skipped-tests argument.

Change-Id: I0bd95ae77067017207a678a6de7f0772f2d6964b
 2026-03-07 11:57:25 +01:00
Ricardo Wurmus
820ebc0350 gnu: r-readr: Replace custom phase with #:skipped-tests. 
* gnu/packages/cran.scm (r-readr)[arguments]: Remove phase
'disable-bad-tests; provide #:skipped-tests argument.

Change-Id: Ifd97b884fee6d4b210b2e890e2002241b6cae8c3
 2026-03-07 11:57:25 +01:00
Ricardo Wurmus
ff26db7570 gnu: r-gfonts: Replace custom phase with #:skipped-tests. 
* gnu/packages/cran.scm (r-gfonts)[arguments]: Remove phase
'delete-bad-tests; provide #:skipped-tests argument.

Change-Id: Iaff7861fac6c56581f41bdcf72c02469bc373ce5
 2026-03-07 11:57:25 +01:00
Ricardo Wurmus
850f39a1a2 gnu: r-cutpointr: Replace custom phase with #:skipped-tests. 
* gnu/packages/cran.scm (r-cutpointr)[arguments]: Remove phase
'delete-bad-tests; provide #:skipped-tests argument.

Change-Id: I72f94b36aaedfd29a2943024f6056dcd17008e8e
 2026-03-07 11:57:25 +01:00
Ricardo Wurmus
2a9edf766c gnu: r-httr2: Replace custom phase with #:skipped-tests. 
* gnu/packages/cran.scm (r-httr2)[arguments]: Remove phase 'delete-bad-tests;
provide #:skipped-tests argument.

Change-Id: Ia505859fcb989980e0a09574b96342affb1929e6
 2026-03-07 11:57:25 +01:00
Ricardo Wurmus
c87d544fab gnu: r-biomart: Update to 2.66.1. 
* gnu/packages/bioconductor.scm (r-biomart): Update to 2.66.1.

Change-Id: I7b44de4ba1bb980ca4c6de8b774f8652bbc3df17
 2026-03-07 11:57:24 +01:00
Ricardo Wurmus
0a9c3f1338 gnu: r-animalcules: Update to 1.26.1. 
* gnu/packages/bioconductor.scm (r-animalcules): Update to 1.26.1.

Change-Id: I57738b1fec6dc5b393a6f26fc87cf9e0ea1f6f76
 2026-03-07 11:57:24 +01:00
Ricardo Wurmus
34df487128 gnu: r-cytoml: Update list of ignored native inputs. 
* gnu/packages/bioconductor.scm (r-cytoml)[properties]: Update
updater-extra-native-inputs.

Change-Id: Iac49c82eb7321c1488ed4737794fa3dee1197215
 2026-03-07 11:57:24 +01:00
Ricardo Wurmus
c2a92688a9 gnu: r-tsne: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-tsne): Move from here...
* gnu/packages/cran.scm (r-tsne): ...to here.

Change-Id: I50f0b37af9c894e738ebe56726f70a563f1b9ec0
 2026-03-07 11:57:24 +01:00
Ricardo Wurmus
4ca3126412 gnu: r-trimcluster: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-trimcluster): Move from here...
* gnu/packages/cran.scm (r-trimcluster): ...to here.

Change-Id: I353868527c835623fd18ff6123f2b4234284f7d2
 2026-03-07 11:57:24 +01:00
Ricardo Wurmus
c9942b9c85 gnu: r-tmvnsim: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-tmvnsim): Move from here...
* gnu/packages/cran.scm (r-tmvnsim): ...to here.

Change-Id: I57b54ad1ff2db25e3dcfa5711110fb79baa59e81
 2026-03-07 11:57:23 +01:00
Ricardo Wurmus
2283d0f242 gnu: r-tidyselect: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-tidyselect): Move from here...
* gnu/packages/cran.scm (r-tidyselect): ...to here.

Change-Id: I4c38afa9a6bb029c2fdd6bd142d8a9e0c5d881f8
 2026-03-07 11:57:23 +01:00
Ricardo Wurmus
8662f4fbca gnu: r-tidyr: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-tidyr): Move from here...
* gnu/packages/cran.scm (r-tidyr): ...to here.

Change-Id: Ief68dbda79958e88c9d25a6c2fe79b5d0094eb94
 2026-03-07 11:57:23 +01:00
Ricardo Wurmus
b0ff234c69 gnu: r-tibble: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-tibble): Move from here...
* gnu/packages/cran.scm (r-tibble): ...to here.

Change-Id: I1f37fdca754c850cbb180d2c39b3d94d45b00a19
 2026-03-07 11:57:23 +01:00
Ricardo Wurmus
782f6f1fab gnu: r-testthat: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-testthat): Move from here...
* gnu/packages/cran.scm (r-testthat): ...to here.

Change-Id: Ie9ba24c0eb48f284c5d82fb0a0d0eabaee3d34ea
 2026-03-07 11:57:23 +01:00
Ricardo Wurmus
aab3612f8d gnu: r-tclust: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-tclust): Move from here...
* gnu/packages/cran.scm (r-tclust): ...to here.

Change-Id: Ic9e03d1bd07792cf0c8568dc9bb25fcab95da8fb
 2026-03-07 11:57:23 +01:00
Ricardo Wurmus
57e31e46c3 gnu: r-synchronicity: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-synchronicity): Move from here...
* gnu/packages/cran.scm (r-synchronicity): ...to here.

Change-Id: I5cf0a6327186e4b7f9f50c01c0900017090d7f6d
 2026-03-07 11:57:23 +01:00