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Commit Graph

162928 Commits

Author SHA1 Message Date
Anderson Torres
9e121c3790 gnu: tinycmmc: Update to 0.1.0-1.2e007ba.
* gnu/packages/cmake.scm (tinycmmc): Update to 0.1.0-1.2e007ba.

Change-Id: I519d118028372d0744ac92c7fbdb77135d4af683
Signed-off-by: Andreas Enge <andreas@enge.fr>
2026-02-14 21:33:19 +01:00
Benjamin
cb5f495224 gnu: hydrus-network: Update to 659.
* gnu/packages/image-viewers.scm (hydrus-network): Update to 636.
[source]: Remove snippet.
[arguments]<#:phases>{patch-variables}: Remove phase.
{install}: Change place to which static directory is copied.
[inputs]: Remove swftools.
[propagated-inputs]: Remove python-cloudscraper and python-six.
[native-inputs]: Remove python-setuptools; add python-pynose.

Co-authored-by: Andreas Enge <andreas@enge.fr>
Change-Id: I72be861cdc3a2ccc2071dd9328067f4be072467e
2026-02-14 21:14:28 +01:00
Andreas Enge
67dc1ca3ec gnu: openfoam-com: Update to 2512.
* gnu/packages/simulation.scm (openfoam-com): Update to 2512.

Change-Id: Id1961be4899ad5139f33ee59c298085eda25e9ff
2026-02-14 17:38:28 +01:00
Iakob Davitis Dze Gogichaishvili
add992a5b4 gnu: yactfr: Fix build.
* gnu/packages/instrumentation.scm (yactfr): Fix build.
[native-inputs]: Remove python-pytest; add python-pytest-8.

Fixes: guix/guix#6392
Change-Id: I89d91b8a21c4c1adff783d07258aecb069f89f62
Signed-off-by: Iakob Davitis Dze Gogichaishvili <iakob.gogichaishvili@gmail.com>
Signed-off-by: Andreas Enge <andreas@enge.fr>
2026-02-14 14:00:30 +01:00
Andy Tai
a74e1277c9 gnu: Add angelscript.
* gnu/packages/game-development.scm (angelscript): New variable.

Closes: guix/guix#6194
Change-Id: Ib11291648ea427ccf168a0b231f40583bb6f20ec
Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2026-02-14 20:54:38 +08:00
Ricardo Wurmus
3bcf57f353 gnu: r-vpc: Update to 1.2.4.
* gnu/packages/statistics.scm (r-vpc): Update to 1.2.4.
[properties]: Record updater-extra-native-inputs.
[native-inputs]: Add r-testthat.

Change-Id: Ife35ee9710a925c6d3a76c23e44a86af2b010e32
2026-02-14 12:34:51 +01:00
Ricardo Wurmus
311c528948 gnu: r-dtplyr: Update to 1.3.3.
* gnu/packages/cran.scm (r-dtplyr): Update to 1.3.3.

Change-Id: Iccad99217b537e183ea4db7a9b41ef1d0143add2
2026-02-14 12:34:43 +01:00
Ricardo Wurmus
0f6d6c36d3 gnu: r-biobroom: Replace call of deprecated procedure.
* gnu/packages/bioconductor.scm (r-biobroom)[arguments]: Add phase
'dplyr-compatibility.
[propagated-inputs]: Add r-tibble.

Change-Id: I6cfb08e430c55b7ae910d87b54c38b6c9192b848
2026-02-14 12:28:11 +01:00
Cayetano Santos
805c3f44fb gnu: emacs-engrave-faces: Update to 0.3.1-0.0cc5d0b.
* gnu/packages/emacs-xyz.scm (emacs-engrave-faces): Update to
0.3.1-0.0cc5d0b.
[source]: Switch to git-fetch.
[arguments]: Disable #:tests?.
[home-page]: Update.

Change-Id: I192f572d8464690ddbb428011677f987be8eb1ea
2026-02-14 11:54:23 +01:00
Guillaume Le Vaillant
6682a3b271 gnu: Add cl-magic-square.
* gnu/packages/lisp-xyz.scm (cl-magic-square, ecl-magic-square,
  sbcl-magic-square): New variables.

Change-Id: I252077ec62df4bd000969b019cca99fdabcba308
2026-02-14 11:07:35 +01:00
Guillaume Le Vaillant
368c5dbe91 gnu: cl-simple-matrix: Update to 3.14.
* gnu/packages/lisp-xyz.scm (sbcl-simple-matrix): Update to 3.14.

Change-Id: Ic915c590f8877dc1536d6f0366caae5e90ce80ea
2026-02-14 10:50:56 +01:00
Cayetano Santos
d2c12da941 gnu: emacs-elisp-autofmt: Update to 0.1-2.8aa1ac5.
* gnu/packages/emacs-xyz.scm (emacs-elisp-autofmt): Update to
0.1-2.8aa1ac5.
[arguments]: Add ’use-appropriate-python #:phase.

Change-Id: I00c3fea14cbe5da65645579e7d920c71a98759d7
2026-02-14 10:28:17 +01:00
Ricardo Wurmus
c8dc645fbd gnu: r-tximeta: Update to 1.28.3.
* gnu/packages/bioconductor.scm (r-tximeta): Update to 1.28.3.

Change-Id: Idfae2347d58ba6c8b58c8d9a6b84bd36e768cf53
2026-02-14 10:18:25 +01:00
Ricardo Wurmus
458277137b gnu: r-rgreat: Update to 2.12.2.
* gnu/packages/bioconductor.scm (r-rgreat): Update to 2.12.2.

Change-Id: Id2b7fe1fbe014eb7374ca2655d9a29b7f82966e6
2026-02-14 10:18:25 +01:00
Ricardo Wurmus
94b82f7c44 gnu: r-pcatools: Update to 2.22.4.
* gnu/packages/bioconductor.scm (r-pcatools): Update to 2.22.4.
[propagated-inputs]: Add r-assorthead.

Change-Id: I40426c8a05626d73e7e0bbe05cf66c949e464d6a
2026-02-14 10:18:25 +01:00
Ricardo Wurmus
c4b88e5e25 gnu: r-biocpkgtools: Update to 1.28.3.
* gnu/packages/bioconductor.scm (r-biocpkgtools): Update to 1.28.3.

Change-Id: Ic2481c53616d8700ad96ae9e2d37bcf717051e65
2026-02-14 10:18:25 +01:00
Ricardo Wurmus
2b62bf4f2e gnu: r-gtrellis: Update to 1.42.1.
* gnu/packages/bioconductor.scm (r-gtrellis): Update to 1.42.1.

Change-Id: I261281d68121866b814e54cb18b0dc7f19c5d7f6
2026-02-14 10:18:24 +01:00
Ricardo Wurmus
1852f5e39d gnu: r-enrichedheatmap: Update to 1.40.1.
* gnu/packages/bioconductor.scm (r-enrichedheatmap): Update to 1.40.1.

Change-Id: I981995b30c57168e999079d22154be3720181dc6
2026-02-14 10:18:24 +01:00
Ricardo Wurmus
f1a3a0999a gnu: r-ggtreeextra: Update to 1.20.1.
* gnu/packages/bioconductor.scm (r-ggtreeextra): Update to 1.20.1.
[propagated-inputs]: Add r-yulab-utils.

Change-Id: I527b401b1acec94ecedf40e28c6c24df25c6be76
2026-02-14 10:18:24 +01:00
Ricardo Wurmus
69ad88eb91 gnu: r-vsn: Update to 3.78.1.
* gnu/packages/bioconductor.scm (r-vsn): Update to 3.78.1.

Change-Id: I452833ad630d094227e342f38dece2aeb70bca37
2026-02-14 10:18:24 +01:00
Ricardo Wurmus
9fc268a8ea gnu: r-scds: Update to 1.26.1.
* gnu/packages/bioconductor.scm (r-scds): Update to 1.26.1.

Change-Id: Iab8249219e3819b1450ee1cc5c325d935fd36f9a
2026-02-14 10:18:24 +01:00
Ricardo Wurmus
5200b1bed5 gnu: r-simplifyenrichment: Update to 2.4.1.
* gnu/packages/bioconductor.scm (r-simplifyenrichment): Update to 2.4.1.

Change-Id: Ic3c156ab1e6384e5a18ca5dce957b73098cb7345
2026-02-14 10:18:24 +01:00
Ricardo Wurmus
5782124bb4 gnu: r-simona: Update to 1.8.1.
* gnu/packages/bioconductor.scm (r-simona): Update to 1.8.1.

Change-Id: I0160004aadf58174b0f9ec023648164cc532f231
2026-02-14 10:18:24 +01:00
Ricardo Wurmus
8c886b250a gnu: r-seqarray: Update to 1.50.1.
* gnu/packages/bioconductor.scm (r-seqarray): Update to 1.50.1.

Change-Id: I36d5c3947cdbb531e46d0a1211ce34bdb5bd4a4b
2026-02-14 10:18:24 +01:00
Ricardo Wurmus
f24609ef4c gnu: r-scannotatr: Update to 1.16.1.
* gnu/packages/bioconductor.scm (r-scannotatr): Update to 1.16.1.

Change-Id: I644db2d421bff2d8c734eb6029572e9875126fc2
2026-02-14 10:18:24 +01:00
Ricardo Wurmus
5ecec28dd7 gnu: r-msnid: Update to 1.44.1.
* gnu/packages/bioconductor.scm (r-msnid): Update to 1.44.1.

Change-Id: I5c4c3b49b7f54f42307354a72decaf3ccc5522f8
2026-02-14 10:18:24 +01:00
Ricardo Wurmus
a5b56cd6e4 gnu: r-enmix: Update to 1.46.1.
* gnu/packages/bioconductor.scm (r-enmix): Update to 1.46.1.

Change-Id: Ifbb853fc68b3c1b887c8f8a9d3d9b7932968b7c2
2026-02-14 10:18:24 +01:00
Ricardo Wurmus
972a988cb5 gnu: r-complexheatmap: Update to 2.26.1.
* gnu/packages/bioconductor.scm (r-complexheatmap): Update to 2.26.1.

Change-Id: Ia3f002b8ab76bd4a49790396ef7825db48c2acc6
2026-02-14 10:18:24 +01:00
Ricardo Wurmus
a6d16216e2 gnu: r-bambu: Update to 3.12.1.
* gnu/packages/bioconductor.scm (r-bambu): Update to 3.12.1.

Change-Id: I04b82f0693afe8805dda6b039150c2ab0c6d9be3
2026-02-14 10:18:24 +01:00
Ricardo Wurmus
ed5af8efe4 gnu: r-anvil: Update to 1.22.5.
* gnu/packages/bioconductor.scm (r-anvil): Update to 1.22.5.

Change-Id: I26c35de22804a20ca4155777305004f3b06120c2
2026-02-14 10:18:23 +01:00
Ricardo Wurmus
446a5a0bc5 gnu: r-systempiperdata: Update to 2.14.4.
* gnu/packages/bioconductor.scm (r-systempiperdata): Update to 2.14.4.

Change-Id: Id543f3da8de708bbb29dd035ce5e19e38fc52634
2026-02-14 10:18:23 +01:00
Ricardo Wurmus
fc7f7301a9 gnu: r-robustbase: Update to 0.99-7.
* gnu/packages/statistics.scm (r-robustbase): Update to 0.99-7.
[native-inputs]: Add r-foreach and r-ggplot2.

Change-Id: I7d58f27f892811cc6a859dd55f664bc016b9a545
2026-02-14 10:18:23 +01:00
Ricardo Wurmus
62d21bc9db gnu: r-segmented: Update to 2.2-1.
* gnu/packages/statistics.scm (r-segmented): Update to 2.2-1.

Change-Id: Iac03c052f54c1a578bc7bcbce9c3d468607aa6aa
2026-02-14 10:18:23 +01:00
Ricardo Wurmus
e3ddcfe89a gnu: r-rsqlite: Update to 2.4.6.
* gnu/packages/statistics.scm (r-rsqlite): Update to 2.4.6.
[propagated-inputs]: Remove r-plogr.

Change-Id: I9eccf5f3a363e81e7e0d1dcbe11aca592f4ee5c2
2026-02-14 10:18:23 +01:00
Ricardo Wurmus
7be00e3a3d gnu: r-viridislite: Update to 0.4.3.
* gnu/packages/cran.scm (r-viridislite): Update to 0.4.3.

Change-Id: I4f5740f88ccbb9164d6d38c69f666e71a3756648
2026-02-14 10:18:23 +01:00
Ricardo Wurmus
157a3afd99 gnu: r-pdftools: Update to 3.7.0.
* gnu/packages/cran.scm (r-pdftools): Update to 3.7.0.

Change-Id: I6795cf63fce2e4451549226977b1feccc6ec700f
2026-02-14 10:18:23 +01:00
Ricardo Wurmus
e7d9794d51 gnu: r-highs: Update to 1.12.0-3.
* gnu/packages/cran.scm (r-highs): Update to 1.12.0-3.

Change-Id: I1dd57586349e58ad5e92d29c7082f6a6ea25d0ba
2026-02-14 10:18:23 +01:00
Ricardo Wurmus
b9c51fd747 gnu: r-mlr3cluster: Update to 0.2.0.
* gnu/packages/cran.scm (r-mlr3cluster): Update to 0.2.0.
[propagated-inputs]: Remove r-clue.

Change-Id: I90e714eded6482df98eb56961fc0a22c51b76b03
2026-02-14 10:18:23 +01:00
Ricardo Wurmus
08bd3edcd6 gnu: r-lgr: Update to 0.5.2.
* gnu/packages/cran.scm (r-lgr): Update to 0.5.2.
[native-inputs]: Add r-future-apply.

Change-Id: I26311cba292fcecbf44e87e88427ee4a7ca7a6e4
2026-02-14 10:18:23 +01:00
Ricardo Wurmus
c6799e0a80 gnu: r-rsample: Update to 1.3.2.
* gnu/packages/cran.scm (r-rsample): Update to 1.3.2.

Change-Id: I41d1d8124f26654dd381727df03d9cc975818283
2026-02-14 10:18:23 +01:00
Ricardo Wurmus
3de0984e1e gnu: r-nanoarrow: Update to 0.7.0-3.
* gnu/packages/cran.scm (r-nanoarrow): Update to 0.7.0-3.

Change-Id: I5a5d4b66ae2efd1f1228ed2e950d6784859b1036
2026-02-14 10:18:23 +01:00
Ricardo Wurmus
b68398bc42 gnu: r-spatstat: Update to 3.5-1.
* gnu/packages/cran.scm (r-spatstat): Update to 3.5-1.

Change-Id: I5952b5ab1ef25e8e9eb7096482be5bec4a19a883
2026-02-14 10:18:22 +01:00
Ricardo Wurmus
0518dac05a gnu: r-spatstat-linnet: Update to 3.4-1.
* gnu/packages/cran.scm (r-spatstat-linnet): Update to 3.4-1.

Change-Id: I96f6ba133da9bebd38efa9425b72637d94d17233
2026-02-14 10:18:22 +01:00
Ricardo Wurmus
98465aeb67 gnu: r-spatstat-model: Update to 3.6-1.
* gnu/packages/cran.scm (r-spatstat-model): Update to 3.6-1.

Change-Id: I2f47b026db207f43be7bda420f9f3cb1aa4d5b06
2026-02-14 10:18:22 +01:00
Ricardo Wurmus
db083e46ac gnu: r-acuityview: Update to 1.1.1.
* gnu/packages/cran.scm (r-acuityview): Update to 1.1.1.

Change-Id: Id61972d70fdb6f6225e41c8210f4274f480cb5bb
2026-02-14 10:18:22 +01:00
Ricardo Wurmus
5533ccdfe1 gnu: r-desolve: Update to 1.41.
* gnu/packages/cran.scm (r-desolve): Update to 1.41.

Change-Id: Ib6e7ee72023ad97fdb920fd931721c1e97935363
2026-02-14 10:18:22 +01:00
Ricardo Wurmus
4378e2eeee gnu: r-arrow: Update to 23.0.0.1.
* gnu/packages/cran.scm (r-arrow): Update to 23.0.0.1.

Change-Id: I7753927e974277ae3767571ce673883fd8f8f18c
2026-02-14 10:18:22 +01:00
Ricardo Wurmus
942af03a14 gnu: r-varselrf: Update to 0.7-9.
* gnu/packages/cran.scm (r-varselrf): Update to 0.7-9.

Change-Id: Ie6d5e25d137372a81523d442a70606b264484c3f
2026-02-14 10:18:22 +01:00
Ricardo Wurmus
8e7c599d23 gnu: r-yulab-utils: Update to 0.2.4.
* gnu/packages/cran.scm (r-yulab-utils): Update to 0.2.4.

Change-Id: I1f634b0a986b0ddb2328a0c5935fceb5188c5425
2026-02-14 10:18:22 +01:00
Ricardo Wurmus
3b6a186a5b gnu: r-learnbayes: Update to 2.15.2.
* gnu/packages/cran.scm (r-learnbayes): Update to 2.15.2.
[propagated-inputs]: Add r-coda, r-lattice, and r-survival.

Change-Id: Ife4e690515f78a68de509cd2ed2ebf2b6a8de93d
2026-02-14 10:18:22 +01:00