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55553 Commits

Author SHA1 Message Date
Efraim Flashner a2a7cc9bfc gnu: lightgbm: Don't use unstable tarball. 
* gnu/packages/machine-learning.scm (lightgbm)[source]: Download using
git-fetch.
[arguments]: Adjust custom 'check phase accordingly.
 2020-06-23 17:02:04 +03:00
Efraim Flashner 92ecee94dd gnu: sonata: Don't use unstable tarball. 
* gnu/packages/mpd.scm (sonata)[source]: Download using git-fetch.
 2020-06-23 16:46:06 +03:00
Efraim Flashner fffe9a1529 gnu: sbcl-md5: Don't use unstable tarball. 
* gnu/packages/lisp-xyz.scm (sbcl-md5)[source]: Download using git-fetch.
 2020-06-23 16:34:34 +03:00
Efraim Flashner b244722879 gnu: nototools: Don't use unstable tarball. 
* gnu/packages/fontutils.scm (nototools)[source]: Download using
git-fetch.
 2020-06-23 16:13:41 +03:00
Efraim Flashner 405b9ba048 gnu: fntsample: Don't use unstable tarball. 
* gnu/packages/fontutils.scm (fntsample)[source]: Download using
git-fetch.
 2020-06-23 16:08:15 +03:00
Efraim Flashner de0f36f0aa gnu: miniasm: Make sure all phases return #t. 
* gnu/packages/bioinformatics.scm (miniasm)[arguments]: Make custom
'install phase return #t.
 2020-06-23 16:04:51 +03:00
Efraim Flashner 896f18210b gnu: miniasm: Don't use unstable tarball. 
* gnu/packages/bioinformatics.scm (miniasm)[source]: Download using
git-fetch.
 2020-06-23 16:04:04 +03:00
Efraim Flashner b9e1fc2f04 gnu: stumpwm-contrib: Add a source file-name. 
* gnu/packages/wm.scm (stumpwm-contrib)[source]: Add file-name field.
 2020-06-23 15:56:50 +03:00
Efraim Flashner 09c2fb1238 gnu: libfreenect: Add a source file-name. 
* gnu/packages/openkinect.scm (libfreenect)[source]: Add file-name field.
 2020-06-23 15:55:27 +03:00
Efraim Flashner 352e09a5b0 gnu: xaos: Add a source file-name. 
* gnu/packages/maths.scm (xaos)[source]: Add file-name field.
 2020-06-23 15:54:38 +03:00
Efraim Flashner b5698f5b38 gnu: java-picocli: Use a source file-name. 
* gnu/packages/java.scm (java-picocli)[source]: Add a file-name field.
 2020-06-23 15:53:54 +03:00
Martin Becze 1ed87c010e gnu: Add go-github-com-emersion-go-imap-idle. 
* gnu/packages/golang.scm (go-github-com-emersion-go-imap-idle): New
variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-06-23 15:11:09 +03:00
Martin Becze 9ba67ef0ea gnu: Add go-github-com-emersion-go-sasl. 
* gnu/packages/golang.scm (go-github-com-emersion-go-sasl): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-06-23 15:11:08 +03:00
Martin Becze 48ee9aa461 gnu: Add go-github-com-emersion-go-imap. 
* gnu/packages/golang.scm (go-github-com-emersion-go-imap): New
variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-06-23 15:11:08 +03:00
Martin Becze bffb8f3c5f gnu: Add go-github-com-ddevault-go-libvterm. 
* gnu/packages/golang.scm (go-github-com-ddevault-go-libvterm): New
variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-06-23 15:11:08 +03:00
Martin Becze d6bae2b7bc gnu: Add go-github-com-danwakefield-fnmatch. 
* gnu/packages/golang.scm (go-github-com-danwakefield-fnmatch): New
variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-06-23 15:11:08 +03:00
Ricardo Wurmus c03cefc3d8 gnu: Add r-kmer. 
* gnu/packages/cran.scm (r-kmer): New variable.

Co-authored-by: Mădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de>
 2020-06-23 13:43:12 +02:00
Ricardo Wurmus f9b3718568 gnu: Add r-phylogram. 
* gnu/packages/cran.scm (r-phylogram): New variable.

Co-authored-by: Mădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de>
 2020-06-23 13:43:12 +02:00
Ricardo Wurmus 755733a3fe gnu: Add r-fourcseq. 
* gnu/packages/cran.scm (r-fourcseq): New variable.

Co-authored-by: Mădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de>
 2020-06-23 13:43:12 +02:00
Ricardo Wurmus c261a7b39a gnu: Add r-lsd. 
* gnu/packages/cran.scm (r-lsd): New variable.

Co-authored-by: Mădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de>
 2020-06-23 13:43:12 +02:00
Mathieu Othacehe 380c3e459b gnu: cuirass: Update to 0.0.1-34.10b16e. 
* gnu/packages/ci.scm (cuirass): Update to 0.0.1-34.10b16e.
 2020-06-23 11:09:24 +02:00
Mathieu Othacehe fd45ecb571 system: image: Remove fakeroot dependencies. 
Since c29bb909d2, fakeroot "sed" and "coreutils"
dependencies are now explicit.

* gnu/system/image.scm (system-disk-image): Remove "sed" and "coreutils" from
inputs.
 2020-06-23 09:51:20 +02:00
Mathieu Othacehe c29bb909d2 gnu: fakeroot: Do not assume "sed" and "cut" to be available. 
* gnu/packages/linux.scm (fakeroot)[inputs]: Add "sed" and "coreutils",
[arguments]: substitute "sed" and "cut" by their absolute path in fakeroot
script. Rename the associated phase from patch-getopt to patch-script.
 2020-06-23 09:51:14 +02:00
Mark H Weaver 42a2ee1f92 gnu: linux-libre: Update to 5.4.48. 
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.48.
(linux-libre-5.4-pristine-source): Update hash.
 2020-06-22 21:02:33 -04:00
Mark H Weaver 83cbfa2091 gnu: linux-libre@5.7: Update to 5.7.5. 
* gnu/packages/linux.scm (linux-libre-5.7-version): Update to 5.7.5.
(linux-libre-5.7-pristine-source): Update hash.
 2020-06-22 21:02:00 -04:00
Mark H Weaver d460e737a8 gnu: linux-libre@4.19: Update to 4.19.129. 
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.129.
(linux-libre-4.19-pristine-source): Update hash.
 2020-06-22 21:00:50 -04:00
Jakub Kądziołka 2dab855bb1 gnu: sequoia: Update to 0.17.0. 
* gnu/packages/sequoia.scm (sequoia): Update to 0.17.0.
  [cargo-inputs]: Add rust-structopt-0.3.
  [phases](unpin-deps): New phase.
 2020-06-23 01:42:02 +02:00
Vinicius Monego 62115b7ab7 gnu: liferea: Update to 1.12.8. 
* gnu/packages/syndication.scm (liferea): Update to 1.12.8.

Signed-off-by: Marius Bakke <marius@gnu.org>
 2020-06-22 23:52:55 +02:00
Marius Bakke 0752dabb40 gnu: mlt: Build with the latest ffmpeg. 
* gnu/packages/video.scm (mlt)[inputs]: Change from FFMPEG-3.4 to FFMPEG.
 2020-06-22 23:52:55 +02:00
Vinicius Monego d6817e0086 gnu: mlt: Update to 6.20.0. 
* gnu/packages/video.scm (mlt): Update to 6.20.0.

Signed-off-by: Marius Bakke <marius@gnu.org>
 2020-06-22 23:52:55 +02:00
Vinicius Monego 9305dfb9fd gnu: darktable: Update to 3.0.2. 
* gnu/packages/photo.scm (darktable): Update to 3.0.2.
[arguments]: Compile with clang.  Wrap GSETTINGS_SCHEMAS_DIR.
[license]: Add license information for Rawspeed.
[native-inputs]: Add clang, desktop-file-utils, glib, gobject-instrospection,
llvm, and po4a.  Reorder alphabetically.
[inputs]: Add colord-gtk, cups, graphicsmagick, gsettings-desktop-schemas,
iso-codes, libsecret, lua, openjpeg, and osm-gps-map.  Reorder alphabetically.

Signed-off-by: Marius Bakke <marius@gnu.org>
 2020-06-22 23:52:55 +02:00
Simon South a212006048 gnu: jamvm: Fix to work with current gcc and glibc. 
* gnu/packages/java.scm (jamvm)[source]: Add patch.
(jamvm-1-bootstrap)[native-inputs]: Remove.
* gnu/packages/patches/jamvm-2.0.0-disable-branch-patching.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Marius Bakke <marius@gnu.org>
 2020-06-22 23:52:55 +02:00
Giacomo Leidi cf66096d51 gnu: template-glib: Update to 3.34.0. 
* gnu/packages/glib.scm (template-glib): Update to 3.34.0.

Signed-off-by: Marius Bakke <marius@gnu.org>
 2020-06-22 23:52:54 +02:00
Edouard Klein 3e84503cb2 gnu: Add python-daemux. 
* gnu/packages/tmux.scm (python-daemux): New variable.

Signed-off-by: Marius Bakke <marius@gnu.org>
 2020-06-22 23:52:54 +02:00
Edouard Klein 3565a30f70 gnu: Add python-libtmux. 
* gnu/packages/tmux.scm (python-libtmux): New variable.

Signed-off-by: Marius Bakke <marius@gnu.org>
 2020-06-22 23:52:54 +02:00
Edouard Klein 9d0e87f8ed gnu: Add python-pyfiglet. 
* gnu/packages/python-xyz.scm (python-pyfiglet): New variable.

Signed-off-by: Marius Bakke <marius@gnu.org>
 2020-06-22 23:52:54 +02:00
Edouard Klein 24297a9a9c gnu: Add python-flask-restx. 
* gnu/packages/python-web.scm (python-flask-restx): New variable.

Signed-off-by: Marius Bakke <marius@gnu.org>
 2020-06-22 23:52:54 +02:00
Edouard Klein 85acb5f53d gnu: Add python-pytest-flask. 
* gnu/packages/python-check.scm (python-pytest-flask): New variable.

Signed-off-by: Marius Bakke <marius@gnu.org>
 2020-06-22 23:52:54 +02:00
Edouard Klein 857c63fe03 gnu: Add python-pytest-benchmark. 
* gnu/packages/python-check.scm (python-pytest-benchmark): New variable.

Signed-off-by: Marius Bakke <marius@gnu.org>
 2020-06-22 23:52:54 +02:00
Edouard Klein bb7e9ab755 gnu: Add python-py-cpuinfo. 
* gnu/packages/python-xyz.scm (python-py-cpuinfo): New variable.

Signed-off-by: Marius Bakke <marius@gnu.org>
 2020-06-22 23:52:53 +02:00
Nicolas Goaziou 68a6070bc3 gnu: Add abe. 
* gnu/packages/games.scm (abe): New variable.
 2020-06-22 22:06:06 +02:00
Jonathan Brielmaier 5d9540ddcf gnu: mate: Don't propagate glib:bin. 
* gnu/packages/mate.scm (mate)[propagated-inputs]: Remove as the
proper fix arrived from core-updates.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-06-22 21:28:12 +03:00
Jonathan Brielmaier a2ebd098d7 gnu: mate-common: Update to 1.24.1. 
* gnu/packages/mate.scm (mate-common): Update to 1.24.1.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-06-22 21:27:38 +03:00
Vinicius Monego bf2ffbcd77 gnu: Add python-pytest-lazy-fixture. 
* gnu/packages/check.scm (python-pytest-lazy-fixture): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-06-22 21:18:40 +03:00
Ricardo Wurmus af02327856 gnu: r-with-tests, r-minimal: Update to 4.0.2. 
* gnu/packages/statistics.scm (r-with-tests, r-minimal): Update to 4.0.2.
 2020-06-22 18:28:52 +02:00
Mathieu Othacehe 7f75a7ec08 system: image: Remove "image-root" when building raw disk-images. 
The "image-root" derivation output is used as a temporary directory that is
passed to mke2fs and mkdosfs later on. By merging the creation of this
directory and the production of partition images, we can get rid of the
derivation.

As mke2fs and mkdosfs are not able to override file permissions, call those
commands with fakeroot. This way, all the image files will be owned by root,
even if image generation is done in an unprivilegded context.

* gnu/system/image.scm (system-disk-image): Merge "image-root" and
"iso9660-image" derivations so that we spare an extra derivation. Also add
"fakeroot" and its runtime dependencies to the inputs.
* gnu/build/image.scm (make-ext-image, make-vfat-image): Make sure that mke2fs
and mkdosfs are respectively called by fakeroot.
 2020-06-22 17:49:19 +02:00
Marius Bakke cf14e67963 gnu: gn: Update to 0.0-1794.eb997b5. 
* gnu/packages/build-tools.scm (gn): Update to 0.0-1794.eb997b5.
 2020-06-22 17:16:39 +02:00
Marius Bakke 75527eb1cb gnu: ungoogled-chromium: Update to 83.0.4103.106-0.f08ce8b [security fixes]. 
This fixes CVE-2020-6465, CVE-2020-6466, CVE-2020-6467, CVE-2020-6468,
CVE-2020-6469, CVE-2020-6470, CVE-2020-6471, CVE-2020-6472, CVE-2020-6473,
CVE-2020-6474, CVE-2020-6475, CVE-2020-6476, CVE-2020-6477, CVE-2020-6478,
CVE-2020-6479, CVE-2020-6480, CVE-2020-6481, CVE-2020-6482, CVE-2020-6483,
CVE-2020-6484, CVE-2020-6485, CVE-2020-6486, CVE-2020-6487, CVE-2020-6488,
CVE-2020-6489, CVE-2020-6490, CVE-2020-6491, CVE-2020-6493, CVE-2020-6494,
CVE-2020-6495, CVE-2020-6496, CVE-2020-6497, and CVE-2020-6498.

* gnu/packages/patches/ungoogled-chromium-system-jsoncpp.patch,
gnu/packages/patches/ungoogled-chromium-system-zlib.patch: New files.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/chromium.scm (%preserved-third-party-files): Adjust for 83.
(%chromium-version): Set to 83.0.4103.106.
(%ungoogled-revision): Set to f08ce8b3f1300ef0750b5d6bf967b9cbbfd9a56d.
(%gentoo-revision, %gentoo-patches, %debian-patches): New variables.
(gentoo-patch, debian-patch): New procedures.
(%chromium-origin, %ungoogled-origin): Update hashes.
(ungoogled-chromium-source): Don't apply patches from %DEBIAN-ORIGIN, but take
%GENTOO-PATCHES, %DEBIAN-PATCHES, and the local patch files.
(ungoogled-chromium)[arguments]: Remove "enable_swiftshader=false" from
 #:configure-flags.  Add "icu_use_data_file=false".  Set CFLAGS in phase.
Remove obsolete substitution.  Adjust install phase to install .so files for
ANGLE and Swiftshader.
[native-inputs]: Change from CLANG-9 to CLANG-10.
[inputs]: Replace ICU4C with ICU4C-67.
(ungoogled-chromium/wayland): Remove obsolete substitution.  Add
"ozone_platform_x11=true" in #:configure-flags.
 2020-06-22 17:16:39 +02:00
Marius Bakke 8169cc736a gnu: icu4c: Add 67.1. 
* gnu/packages/icu4c.scm (icu4c-67): New public variable.
 2020-06-22 17:16:39 +02:00
Marius Bakke acac3b94d7 gnu: ungoogled-chromium: Specify CPE name. 
* gnu/packages/chromium.scm (ungoogled-chromium)[properties]: Add CPE-NAME.
 2020-06-22 17:16:39 +02:00