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e2c76bdd8376d3ef26ce74ab42ea1cebee669f1b
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114083 Commits

Author SHA1 Message Date
Ricardo Wurmus
e2c76bdd83 gnu: python-scikit-image: Update to 0.22.0. 
* gnu/packages/python-science.scm (python-scikit-image): Update to 0.22.0.
[source]: Fetch from git repository.
[build-system]: Use pyproject-build-system.
[arguments]: Use G-expression; remove custom 'build phase; simplify 'check
phase; enable all tests.
[propagated-inputs]: Add python-lazy-loader.
[native-inputs]: Add meson-python, python-numpydoc, python-packaging, and
python-wheel.

Change-Id: I00ede026a7941eae36157106f753a21fb64099c3
 2024-01-16 12:44:34 +01:00
Ricardo Wurmus
32edfc4a85 gnu: python-imageio: Update to 2.33.1. 
* gnu/packages/python-xyz.scm (python-imageio): Update to 2.33.1.
[propagated-inputs]: Remove python-psutil; add python-tifffile.
[native-inputs]: Add python-black, python-flake8, python-fsspec, and
python-pytest-cov.

Change-Id: I5c64d939f5ee94ac9ec8fdbd7b51cd978b7df0fb
 2024-01-16 12:44:34 +01:00
Ricardo Wurmus
6fbbffd6ef gnu: python-lazy-loader: Update to 0.3. 
* gnu/packages/python-xyz.scm (python-lazy-loader): Update to 0.3.
[native-inputs]: Add python-pre-commit.

Change-Id: Id4f8b61e6e60dd6da04beb8c1e4d064dc34d994c
 2024-01-16 12:44:34 +01:00
Ricardo Wurmus
299455fef2 gnu: python-tifffile: Update to 2023.12.9. 
* gnu/packages/python-xyz.scm (python-tifffile): Update to 2023.12.9.
[propagated-inputs]: Remove python-imagecodecs.
[native-inputs]: Add python-pytest.

Change-Id: I2567bef390e286ed4399cc67b80a9df503f53c0a
 2024-01-16 12:44:34 +01:00
Ricardo Wurmus
accd091fff gnu: python-scipy: Update to 1.11.4. 
* gnu/packages/python-science.scm (python-scipy): Update to 1.11.4.
[arguments]: Use mesonpy backend.
[inputs]: Replace pybind11 with pybind11-2.10.
[native-inputs]: Add python-click, python-doit, python-pooch, and
python-pydevtool; replace python-cython with python-cython-0.29.35.

Change-Id: I4b26e1b6382899bba24f84461f154e97765e08f5
 2024-01-16 12:44:34 +01:00
Ricardo Wurmus
22c5d2d835 gnu: meson-python: Update to 0.15.0. 
* gnu/packages/build-tools.scm (meson-python): Update to 0.15.0.
[arguments]: Add phase 'delete-directory.
[propagated-inputs]: Add python-cython, python-pyproject-metadata-0.7, and
python-typing-extensions.
[native-inputs]: Add python-pytest-cov.

Change-Id: I412af929c9e0485aa2a15e316d247f58e6f3477b
 2024-01-16 12:44:34 +01:00
Ricardo Wurmus
08f48f2939 gnu: Add python-pydevtool. 
* gnu/packages/python-xyz.scm (python-pydevtool): New variable.

Change-Id: I325b81fa6421094a5a64084c06e66b8fa136e270
 2024-01-16 12:44:34 +01:00
Ricardo Wurmus
1c91d45724 gnu: Add python-pyproject-metadata-0.7. 
* gnu/packages/python-xyz.scm (python-pyproject-metadata-0.7): New variable.

Change-Id: I7c47c911fa2a33c0b5711b0009f31b3e32c1c1d7
 2024-01-16 12:44:34 +01:00
Ricardo Wurmus
1fb5d95e75 gnu: python-doit: Update to 0.36.0. 
* gnu/packages/python-xyz.scm (python-doit): Update to 0.36.0.
[build-system]: Use pyproject-build-system.
[arguments]: Disable test_execute test.
[propagated-inputs]: Remove python-pyinotify; add python-importlib-metadata.
[description]: Add missing spaces between two sentences.

Change-Id: I1d046201c9bef63477f8fb0a2f8494bffbbbc711
 2024-01-16 12:44:34 +01:00
Ricardo Wurmus
1d91698478 gnu: Add pybind11-2.10. 
* gnu/packages/python-xyz.scm (pybind11-2.10): New variable.

Change-Id: Ia7915af3baca36b0677d3f762046585abc473f56
 2024-01-16 12:44:33 +01:00
Ricardo Wurmus
ce451cdcb8 gnu: Add python-cython-0.29.35. 
* gnu/packages/python-xyz.scm (python-cython-0.29.35): New variable.

Change-Id: I09ec851a2051e885f6417524bbeeb81b743bef0b
 2024-01-16 12:44:33 +01:00
Ricardo Wurmus
33d0a549e9 gnu: Add python-pydoc-markdown. 
* gnu/packages/python-xyz.scm (python-pydoc-markdown): New variable.

Change-Id: I03e45c2b87f626f7a8113d785c72c14a301d79be
 2024-01-16 12:36:08 +01:00
Ricardo Wurmus
b05fe5c763 gnu: python-yapf: Update to 0.32.0. 
* gnu/packages/python-xyz.scm (python-yapf): Update to 0.32.0.
[build-system]: Use pyproject-build-system.
[native-inputs]: Add python-pytest.
[propagated-inputs]: Add python-importlib-metadata, python-platformdirs, and
python-tomli.

Change-Id: I30fa0b9d643f6585624da87d5c1a1edbb59425c4
 2024-01-16 12:21:07 +01:00
Ricardo Wurmus
1fcf3d2a0c gnu: Add python-docspec-python. 
* gnu/packages/python-xyz.scm (python-docspec-python): New variable.

Change-Id: Ic607d0a34a8601dd464251edd8c8509314b7489c
 2024-01-16 11:56:34 +01:00
Ricardo Wurmus
8721b9c1fb gnu: Add python-nr-util. 
* gnu/packages/python-xyz.scm (python-nr-util): New variable.

Change-Id: I26dda5e5bc03334fb476e3f1fd2fa6aaf93a91c3
 2024-01-16 11:37:07 +01:00
Artyom V. Poptsov
21f5d20d68 gnu: go-github-com-arceliar-ironwood: Update to v0.0.0-20231127131626-465b82dfb5bd. 
* gnu/packages/golang.scm (go-github-com-arceliar-ironwood): Update to
  v0.0.0-20231127131626-465b82dfb5bd.

Change-Id: Ia94d7c88e54d33f7bb7b5054a757d7ef203d47c2
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2024-01-15 23:18:58 +00:00
Artyom V. Poptsov
5358b308a1 gnu: yggdrasil: Update to 0.5.4. 
* gnu/packages/networking.scm (yggdrasil): Update to 0.5.4.

Change-Id: I4f386e1b69627b0c5a6095c42274b8a8bff8bfd9
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2024-01-15 23:18:35 +00:00
Troy Figiel
eb0f35e16d gnu: hypercorn: Reformat with guix style. 
* gnu/packages/python-web.scm (hypercorn): Reformat with guix style.
 2024-01-15 22:43:58 +00:00
Troy Figiel
68763a00a3 gnu: hypercorn: Adjust inputs. 
* gnu/packages/python-web.scm (hypercorn)[propagated-inputs]: Add
python-exceptiongroup and python-tomli. Remove python-toml and
python-typing-extensions.
[native-inputs]: Remove python-mock.
 2024-01-15 22:43:35 +00:00
Ricardo Wurmus
287dee537b gnu: Remove python-tslearn. 
This package now lives in the guix-science channel.

* gnu/packages/machine-learning.scm (python-tslearn): Remove variable.

Change-Id: I655df3417d258cb1231746626817fde9628e9569
 2024-01-15 23:35:25 +01:00
Ricardo Wurmus
ddde736722 gnu: Add python-docspec. 
* gnu/packages/python-xyz.scm (python-docspec): New variable.

Change-Id: I3103bde3483273a335156b38de742f493fd366f1
 2024-01-15 23:06:15 +01:00
Ricardo Wurmus
12ae026e51 gnu: Add python-databind-json. 
* gnu/packages/python-xyz.scm (python-databind-json): New variable.

Change-Id: Iaab64e28ba6772c14704ff67cffab21a2f555460
 2024-01-15 23:06:15 +01:00
Ricardo Wurmus
97692be948 gnu: Add python-databind-core. 
* gnu/packages/python-xyz.scm (python-databind-core): New variable.

Change-Id: I45bf0ec5ef123ea20c50e2ca3caf930bfba45eea
 2024-01-15 23:06:15 +01:00
Ricardo Wurmus
6b81503bae gnu: Add python-typeapi. 
* gnu/packages/python-xyz.scm (python-typeapi): New variable.

Change-Id: Id89f3152bcd593d677c4fcb7c98d586cd50e820b
 2024-01-15 23:06:15 +01:00
Ricardo Wurmus
7dfe41aa71 gnu: Add python-nr-stream. 
* gnu/packages/python-xyz.scm (python-nr-stream): New variable.

Change-Id: I59489156e4675a64a31b1cb7f62b7c845c005ce8
 2024-01-15 23:06:15 +01:00
Ricardo Wurmus
aa51d1d25f gnu: Add python-nr-date. 
* gnu/packages/python-xyz.scm (python-nr-date): New variable.

Change-Id: I4251aef073df29ccada70f1398bce38cfb8962ba
 2024-01-15 23:06:15 +01:00
Ricardo Wurmus
7a2d128779 gnu: Add python-namex. 
* gnu/packages/python-xyz.scm (python-namex): New variable.

Change-Id: I02d4ed5e426f0b432c27086aa90628ae54759ca2
 2024-01-15 23:06:15 +01:00
Troy Figiel
19db1551dc gnu: python-requests-kerberos: Enable tests. 
* gnu/packages/python-web.scm (python-requests-kerberos): Enable tests.
[source]: Replace the PyPI release by the Github release.
[build-system]: Swap to pyproject-build-system.
[native-inputs]: Add python-pytest and python-pytest-mock.

Co-authored-by: Sharlatan Hellseher <sharlatanus@gmail.com>
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
Change-Id: Iea750cf722293c4054a6c6e43787806f8f2fd5e2
 2024-01-15 21:47:27 +00:00
Troy Figiel
da3764b75c gnu: python-requests-kerberos: Fix build. 
* gnu/packages/python-web.scm (python-requests-kerberos)[propagated-inputs]:
Add python-gssapi.

Co-authored-by: Sharlatan Hellseher <sharlatanus@gmail.com>
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
Change-Id: I65d1fac0339a119e7a4912d5db150b4adb7586ad
 2024-01-15 21:43:20 +00:00
Sharlatan Hellseher
7061f0b1d0 gnu: python-pyspnego: Propagate python-krb5. 
* gnu/packages/python-xyz.scm (python-pyspnego)[propagated-inputs]: Add
python-krb5.

Change-Id: I2c8ccbd66394cb90ea047f7327d05ecbfe2ec22d
 2024-01-15 21:29:49 +00:00
Troy Figiel
bba2fa646d gnu: Add python-krb5. 
* gnu/packages/python-xyz.scm (python-krb5): New variable.

Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2024-01-15 21:15:09 +00:00
Sharlatan Hellseher
1e3f1f9f92 gnu: Remove python-activepapers. 
<https://issues.guix.gnu.org/68425>

This package fails to build and has been not maintained since 2017.

* gnu/packages/python-xyz.scm (python-activepapers): Remove variable.

Reported-by: Troy Figiel <troy@troyfigiel.com>
Change-Id: Id1e968cd4e06919a80ad05e5c8d3fb207426fdde
 2024-01-15 20:56:22 +00:00
Ludovic Courtès
162d6a2fdd gnu: hpcguix-web: Add explicit dependency on Guile-GnuTLS. 
This is necessary in hpcguix-web 0.4.1 to connect to
https://disarchive.guix.gnu.org.

* gnu/packages/web.scm (hpcguix-web)[arguments]: In ‘wrap-program’ phase,
add guile-gnutls to the wrapper’s search path.
[inputs]: Add GUILE-GNUTLS.

Change-Id: Ic4d6f65adeb763a404fc24c7e1c87fd7d26550c7
 2024-01-15 08:57:01 +01:00
Tanguy Le Carrour
f6afaf58b0 gnu: fish-foreign-env: Update to 0.20230823. 
* gnu/packages/shells.scm (fish-foreign-env): Update to 0.20230823.
[arguments]: Do no substitute in file that no longer exists.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
Change-Id: I04138c1d3e8c174b2197e5ca60aaca4caa5453cc
 2024-01-14 23:00:04 +01:00
Ludovic Courtès
68f04aa339 gnu: cuirass: Update to 7bcd3d0. 
* gnu/packages/ci.scm (cuirass): Update to 7bcd3d0.

Change-Id: Iefc460df509a2c006f3a49d6050ef08940ed2850
 2024-01-14 23:00:04 +01:00
Jack Hill
ef270f9d73 gnu: openssh: Fix build on ppc64le. 
* gnu/packages/ssh.scm (openssh)[source]:
Use 'openssh-gcc-13-ppc64le-fzero-call-used-regs.patch'.
* gnu/packages/patches/openssh-gcc-13-ppc64le-fzero-call-used-regs.patch:
New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Reported-by: Marcel van der Boom <marcel@van-der-boom.nl>.

Change-Id: I41b1350b2cdd1487a8fd69b13b64f63c0dc166c9
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2024-01-14 23:00:04 +01:00
Artyom V. Poptsov
80bec14a9e gnu: guile-ssh: Update to 0.16.4. 
* gnu/packages/ssh.scm (guile-ssh): Update to 0.16.4.
  [arguments]: Improve the style.

Change-Id: Ib7d741e7f4fc7a1fc167cfa4f7953f84d9f4d390
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2024-01-14 23:00:04 +01:00
Ludovic Courtès
fe736803da gnu: hpcguix-web: Update to 0.4.1. 
* gnu/packages/web.scm (hpcguix-web): Update to 0.4.1.

Change-Id: I8bd642735b3cbdf03b07cdd184295b6e32a4e6f7
 2024-01-14 23:00:03 +01:00
Ludovic Courtès
db43edaa0a gnu: Make intermediate packages public but hidden. 
This makes those packages visible to (gnu ci), giving them first class
in the eyes of Cuirass and similar tools, in turn ensuring substitutes
are available (this was discovered by running ‘guix weather -c 10’).

* gnu/packages/rust.scm (rust-bootstrap, rust-1.55)
(rust-1.56, rust-1.57, rust-1.58, rust-1.59, rust-1.60)
(rust-1.61, rust-1.62, rust-1.63, rust-1.64, rust-1.65)
(rust-1.66, rust-1.67, rust-1.68, rust-1.69, rust-1.70)
(rust-1.71, rust-1.72, rust-1.73): Make variable public and add
‘hidden?’ property.
(rust): Remove ‘hidden?’ property.
* gnu/packages/java.scm (java-hamcrest-parent-pom)
(java-org-ow2-parent-pom-1.3, java-asm-bootstrap): Make variable public
and add ‘hidden?’ property.
* gnu/packages/ocaml.scm (dune-bootstrap)
(ocaml4.09-dune-bootstrap, ocaml5.0-dune-bootstrap): Likewise.

Change-Id: I32b0ea639a4f1c39466875acdbc9cbadf75c7668
 2024-01-14 23:00:02 +01:00
Herman Rimm
3f301ddc4f gnu: qutebrowser: Update to 3.1.0. 
* gnu/packages/web-browsers (qutebrowser): Update to 3.1.0.
[inputs]: Use PyQt6, placed before PyQtWebengine.
[arguments]: Replace qt5 path with qt6 path and wrap program with
QTWEBENGINE_RESOURCES_PATH.
[description]: Replace PyQt5 with PyQt6.

Signed-off-by: Clément Lassieur <clement@lassieur.org>
 2024-01-14 22:19:18 +01:00
Tristan Cottam
bcc9cd1aae gnu: Add minetest-server. 
* gnu/packages/minetest.scm (minetest-server): New variable.

Change-Id: I1125888b2944acc4063a19db4c602d33286a7e14
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
 2024-01-14 12:59:28 +01:00
Simon South
3351c5e59d gnu: unknown-horizons: Fix build and runtime errors. 
Apply two upstream commits that allow building with Python 3.9 or newer and
running with Python 3.10.

* gnu/packages/patches/unknown-horizons-python-3.9.patch: New file.
* gnu/packages/patches/unknown-horizons-python-3.10.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/games.scm (unknown-horizons)[source]: Apply them.

Change-Id: Icbc8b698b913be01465b09ab26afb29e5fd62a87
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
Fixes: Unknown Horizons fails to start <https://bugs.gnu.org/54815>
 2024-01-14 10:02:07 +01:00
Simon South
e7823dbe8c gnu: fifengine: Fix runtime error when using Python 3.9 or newer. 
* gnu/packages/patches/fifengine-python-3.9-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/games.scm (fifengine)[source]: Apply it.

Change-Id: I61001d6b87db00c71f1e2e6ca3bac8581e941451
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
 2024-01-14 10:01:59 +01:00
John Kehayias
18393fcddd gnu: check2: Fix tests on i686-linux. 
Reported upstream to <https://github.com/catchorg/Catch2/issues/2796>.  It is
expected that SSE2 is enabled for i686 builds or tests fail.

* gnu/packages/check.scm (check2)[arguments]: Enable SSE2 for x86_64-linux and
i686-linux in configure-flags.

Co-authored-by: Richard Sent <richard@freakingpenguin.com>
Co-authored-by: Jo Gay <@jane.lx.gay>
Change-Id: I99205f92b66ab3d10affbfb58918f37069ba82ec
 2024-01-13 17:29:46 -05:00
Tomas Volf
2282c16533 gnu: Add guile-srfi-197. 
* gnu/packages/guile-xyz.scm (guile-srfi-197): New variable.

Change-Id: Ifcdc264e6a03e88e7614d79792fbe6ca9c8e519c
Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
 2024-01-13 15:39:09 +01:00
Guillaume Le Vaillant
5e9af6ad5c gnu: sdrangel: Update to 7.17.3. 
* gnu/packages/radio.scm (sdrangel): Update to 7.17.3.

Change-Id: Ib64a1cded8b7682eab97667036fbcdf38590ded2
 2024-01-13 13:56:20 +01:00
Guillaume Le Vaillant
4415497257 gnu: dsdcc: Update to 1.9.5. 
* gnu/packages/radio.scm (dsdcc): Update to 1.9.5.

Change-Id: I47d787850932f5648aec267591e3102be86275ca
 2024-01-13 13:50:23 +01:00
Guillaume Le Vaillant
7b5a3c0127 gnu: rtl-433: Update to 23.11. 
* gnu/packages/radio.scm (rtl-433): Update to 23.11.

Change-Id: I06c5bdf4cffab5e27bbaa0621cb835c93656e6c2
 2024-01-13 13:43:12 +01:00
Charles Jackson
f7f608d3b4 gnu: Add cl-command-line-args. 
* gnu/packages/lisp-xyz.scm (cl-command-line-args, ecl-command-line-args,
  sbcl-command-line-args): New variables.

Change-Id: I6a829e6934b93c58a9c2a3673bb553d1e2132007
Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2024-01-13 13:43:12 +01:00
Hilton Chain
551d013a56 gnu: iwd: Patch resolvconf path. 
* gnu/packages/networking.scm (iwd)[inputs]: Add openresolv.
[arguments]<#:phases>: Add 'patch-resolvconf-path.

Change-Id: Ica59a76dd6318e06979314e4b49c5371f4c98e4d
 2024-01-13 17:07:17 +08:00