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50343 Commits

Author SHA1 Message Date
Tobias Geerinckx-Rice 2588693df1 gnu: rhythmbox: Don't use NAME in source URI. 
* gnu/packages/gnome.scm (rhythmbox)[source]: Hard-code NAME.
 2020-03-07 01:41:23 +01:00
Tobias Geerinckx-Rice d748843312 gnu: knot: Update to 2.9.3. 
* gnu/packages/dns.scm (knot): Update to 2.9.3.
 2020-03-07 01:41:23 +01:00
Tobias Geerinckx-Rice ed2d015d29 gnu: hplip: Update to 3.20.2. 
* gnu/packages/cups.scm (hplip): Update to 3.20.2.
 2020-03-07 01:41:23 +01:00
Tobias Geerinckx-Rice 64df1416c2 gnu: gkrellm: Update to 2.3.11. 
* gnu/packages/gkrellm.scm (gkrellm): Update to 2.3.11.
 2020-03-07 01:41:23 +01:00
Kei Kebreau 1d3c6a31b5 gnu: wxmaxima: Update to 20.02.4. 
* gnu/packages/maths.scm (wxmaxima): Update to 20.02.4.
[arguments]: Enable tests and set #:test-target to "test".
[native-inputs]: Add xorg-server-for-tests.
 2020-03-06 15:04:34 -05:00
Mark H Weaver c2f41cb3e8 gnu: linux-libre: Update to 5.4.24. 
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.24.
(linux-libre-5.4-pristine-source): Update hash.
 2020-03-06 14:20:30 -05:00
Mark H Weaver 5d01cc3673 gnu: linux-libre@4.19: Update to 4.19.108. 
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.108.
(linux-libre-4.19-pristine-source): Update hash.
 2020-03-06 14:19:34 -05:00
Marius Bakke a009a3eead gnu: ungoogled-chromium: Increase max-silent-time. 
* gnu/packages/chromium.scm (ungoogled-chromium)[properties]: Add
'max-silent-time'.
 2020-03-06 18:42:36 +01:00
Marius Bakke a125397a4b gnu: mercurial: Update to 5.3.1. 
* gnu/packages/version-control.scm (mercurial): Update to 5.3.1.
[native-inputs]: Add WHICH.
 2020-03-06 18:42:36 +01:00
Vagrant Cascadian 87bf568022 Do not record store file name in cpp.scm. 
* gnu/packages/cpp.scm (abseil-cpp): Replace full store file name with '...'
 2020-03-06 08:24:45 -08:00
Tobias Geerinckx-Rice 1ab58a3d90 gnu: carla: Fix start-up. 
This fixes <https://debbugs.gnu.org/cgi/bugreport.cgi?bug=39942>,
properly.

* gnu/packages/audio.scm (carla)[arguments]: Add ‘wrap-executables’ phase.
[inputs]: Add guile-2.2.
 2020-03-06 16:29:16 +01:00
Tobias Geerinckx-Rice 366c2c8f48 gnu: fmt: Fix home page. 
* gnu/packages/pretty-print.scm (fmt)[home-page]: Update.
 2020-03-06 16:23:49 +01:00
Tobias Geerinckx-Rice 522ec708bc gnu: Order module imports in (gnu packages audio). 
* gnu/packages/audio.scm: Order module imports alphabetically.
 2020-03-06 16:23:49 +01:00
Tobias Geerinckx-Rice 5424e680b8 gnu: carla: Partially fix start-up. 
This fixes <https://debbugs.gnu.org/cgi/bugreport.cgi?bug=39942> but
carla still fails to start.

Reported by Nathan Dehnel <ncdehnel@gmail.com>.

* gnu/packages/audio.scm (carla)[arguments]: Add ‘make-carla-executable’ phase.
 2020-03-06 15:02:33 +01:00
Mathieu Othacehe b4335cfb55 gnu: guix: Fix cross-compilation. 
* gnu/packages/package-management.scm (guix)[native-inputs]: Add all Guile
libraries to fix cross-compilation.
 2020-03-06 13:51:52 +01:00
Tobias Geerinckx-Rice 462ca0bbb7 gnu: dovecot: Update to 2.3.10. 
* gnu/packages/mail.scm (dovecot): Update to 2.3.10.
 2020-03-06 13:01:29 +01:00
Marius Bakke 92594b2e0f gnu: vpnc-scripts: Tighten substitution regex. 
* gnu/packages/vpn.scm (vpnc-scripts)[arguments]: Do not substitute file names
starting with /bin to preserve /bin/sh shebangs.
 2020-03-06 12:54:47 +01:00
Marius Bakke c67ee58c72 gnu: pangox-compat: Build with pango@1.42. 
* gnu/packages/gtk.scm (pangox-compat)[inputs]: Change from PANGO to PANGO-1.42.
 2020-03-06 12:54:47 +01:00
Marius Bakke b8e08aa2e4 gnu: pango@1.42: Do not inherit replacements from pango@1.44. 
* gnu/packages/gtk.scm (pango-1.42): Do not use PACKAGE/INHERIT.
 2020-03-06 12:54:47 +01:00
Pierre Neidhardt 59d4c8c2bf gnu: Add gnome-boxes. 
* gnu/packages/gnome.scm (gnome-boxes): New variable.
 2020-03-06 12:46:26 +01:00
Pierre Neidhardt 852fa6050e gnu: tracker-miners: Update to 2.3.2. 
* gnu/packages/gnome.scm (tracker-miners): Update to 2.3.2.
 2020-03-06 12:46:26 +01:00
Pierre Neidhardt 63db190a52 gnu: tracker: Update to 2.3.2. 
* gnu/packages/gnome.scm (tracker): Update to 2.3.2.
[arguments]: Fix tests properly.
[native-inputs]: Remove unneeded native-inputs.
[inputs]: Remove unneeded inputs.
[description]: Replace unclear description with more down to earth use cases.
[license]: Replace lgpl2.0+ with bsd-3 to reflect update.
 2020-03-06 12:46:26 +01:00
Pierre Neidhardt a9838ee00a gnu: libvirt-glib: Update to 3.0.0. 
* gnu/packages/virtualization.scm (libvirt-glib): Update to 3.0.0.
 2020-03-06 12:46:26 +01:00
Marius Bakke 7154f5ef4b gnu: python-pygit2: Update to 1.1.0. 
* gnu/packages/python-xyz.scm (python-pygit2): Update to 1.1.0.
[propagated-inputs]: Remove PYTHON-SIX and PYTHON-TOX.  Add PYTHON-CACHED-PROPERTY.
(python2-pygit2): Remove variable (Python 2 is no longer supported).
 2020-03-06 12:31:08 +01:00
Marius Bakke 5358950259 gnu: gitg: Remove redundant input. 
* gnu/packages/gnome.scm (gitg)[inputs]: Remove LIBGIT2.
 2020-03-06 12:31:07 +01:00
Marius Bakke 8c6aae4636 gnu: libgit2-glib: Adjust inputs. 
* gnu/packages/gnome.scm (libgit2-glib)[native-inputs]: Move LIBSSH2 ...
[inputs]: ... here.  Move LIBGIT2 ...
[propagated-inputs]: ... here.  New field.
 2020-03-06 12:31:07 +01:00
Marius Bakke 6448c2e156 gnu: libgit2-glib: Update to 0.99.0.1. 
* gnu/packages/gnome.scm (libgit2-glib): Update to 0.99.0.1.
[native-inputs]: Remove INTLTOOL.
 2020-03-06 12:31:07 +01:00
Ricardo Wurmus dd386dd74f gnu: r-modeltools: Update to 0.2-23. 
* gnu/packages/statistics.scm (r-modeltools): Update to 0.2-23.
 2020-03-06 12:15:51 +01:00
Ricardo Wurmus 87aa4d6245 gnu: r-ggplot2: Update to 3.3.0. 
* gnu/packages/statistics.scm (r-ggplot2): Update to 3.3.0.
[propagated-inputs]: Remove r-lazyeval, r-reshape2, and r-viridislite; add
r-glue and r-isoband.
 2020-03-06 12:15:51 +01:00
Ricardo Wurmus bafedbc362 gnu: Add r-isoband. 
* gnu/packages/cran.scm (r-isoband): New variable.
 2020-03-06 12:15:51 +01:00
Ricardo Wurmus 858d5d7037 gnu: r-bookdown: Update to 0.18. 
* gnu/packages/cran.scm (r-bookdown): Update to 0.18.
 2020-03-06 12:15:51 +01:00
Ricardo Wurmus 099adcf81f gnu: r-fs: Update to 1.3.2. 
* gnu/packages/cran.scm (r-fs): Update to 1.3.2.
 2020-03-06 12:15:51 +01:00
Ricardo Wurmus 36488596b4 gnu: r-flextable: Update to 0.5.9. 
* gnu/packages/cran.scm (r-flextable): Update to 0.5.9.
 2020-03-06 12:15:51 +01:00
Ricardo Wurmus be01767cb9 gnu: r-lava: Update to 1.6.7. 
* gnu/packages/cran.scm (r-lava): Update to 1.6.7.
 2020-03-06 12:15:50 +01:00
Roel Janssen 83a483aac7 gnu: Update python-scikit-learn to 0.22.1. 
* gnu/packages/machine-learning.scm (python-scikit-learn): Update to 0.22.1;
  Add python-joblib to native-inputs to run the test suite.
 2020-03-06 10:45:51 +01:00
Pierre Neidhardt 6d26ee3b67 gnu: Add soci. 
* gnu/packages/databases.scm (soci): New variable.
 2020-03-06 10:20:55 +01:00
Pierre Neidhardt 8be782c713 gnu: fmt: Update to 6.1.2. 
* gnu/packages/pretty-print.scm (fmt): Update to 6.1.2.
 2020-03-06 10:15:19 +01:00
Pierre Neidhardt 744f445c92 gnu: fmt: Use HTTPS and git-fetch. 
* gnu/packages/pretty-print.scm (fmt)[source]: Use git-fetch.
[home-page]: Use HTTPS.
 2020-03-06 10:15:19 +01:00
Ricardo Wurmus fecd32501f gnu: python-aiohttp: Update to 3.6.2. 
* gnu/packages/python-web.scm (python-aiohttp): Update to 3.6.2.
 2020-03-06 09:16:48 +01:00
Ricardo Wurmus 858e642e4c gnu: python-scanpy: Update to 1.4.5.1. 
* gnu/packages/bioinformatics.scm (python-scanpy): Update to 1.4.5.1.
[source]: Fetch from pypi.
[propagated-inputs]: Add python-legacy-api-wrap, python-packaging,
python-patsy, and python-umap-learn.
[native-inputs]: Add python-setuptools-scm.
 2020-03-06 09:16:48 +01:00
Ricardo Wurmus 053ab825be gnu: Add python-legacy-api-wrap. 
* gnu/packages/python-xyz.scm (python-legacy-api-wrap): New variable.
 2020-03-06 09:16:48 +01:00
Ricardo Wurmus 2ceff35f07 gnu: Add python-get-version. 
* gnu/packages/python-xyz.scm (python-get-version): New variable.
 2020-03-06 09:16:48 +01:00
Ricardo Wurmus cc2c2850ce gnu: Add python-pytest-black. 
* gnu/packages/python-xyz.scm (python-pytest-black): New variable.
 2020-03-06 09:16:48 +01:00
Ricardo Wurmus 5f603fab23 gnu: python-black: Update to 19.10b0. 
* gnu/packages/python-xyz.scm (python-black): Update to 19.10b0.
[arguments]: Patch tests.
[propagated-inputs]: Add python-pathspec, python-regex, and python-typed-ast.
[native-inputs]: Add python-setuptools-scm.
 2020-03-06 09:16:48 +01:00
Ricardo Wurmus c777ecb372 gnu: Add python-pathspec. 
* gnu/packages/python-xyz.scm (python-pathspec): New variable.
 2020-03-06 09:16:48 +01:00
Ricardo Wurmus 538c1a024a gnu: python-tables: Use later hdf5 version. 
* gnu/packages/python-xyz.scm (python-tables)[inputs]: Replace hdf5 with
hdf5-1.10.
 2020-03-06 09:16:47 +01:00
Ricardo Wurmus 70b74663b6 gnu: python-tables: Do not detect CPU features. 
* gnu/packages/python-xyz.scm (python-tables)[arguments]: Add phase
"disable-tuning".
 2020-03-06 09:16:47 +01:00
Ludovic Courtès bc8b2ffdac ci: Adjust 'channel-build-system' for when the source is a file name. 
Fixes an evaluation error introduced in
dd1ee160be: when invoked via
'build-aux/cuirass/gnu-system.scm', SOURCE is a store file name, not a
<local-file> as it is when invoked via 'etc/system-tests.scm'.

* gnu/ci.scm (channel-build-system)[build]: Call 'lower-object' only
when SOURCE is not a string.
 2020-03-05 23:40:24 +01:00
Mathieu Othacehe e666a92344 tests: install: Add %test-gui-installed-os-encrypted. 
* gnu/tests/install.scm (%test-gui-installed-os-encrypted): New variable,
(guided-installation-test): set a swap-device only if there is no encryption.
 2020-03-05 23:40:24 +01:00
Mathieu Othacehe 64704be417 installer: Fix cow-store umount. 
This fixes <https://bugs.gnu.org/39712>.

The guix-daemon was preventing the cow-store umount, so restart it.  Some
udevd workers, using cow-store files might also still be around, so have some
umount retries.

* gnu/installer/final.scm (kill-cow-users): New procedure,
(umount-cow-store): restart guix-daemon and kill all processes started from
within the cow-store before trying to umount the store overlay. Also try 5
times to umount the overlay in case it is still busy.
 2020-03-05 23:40:24 +01:00