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166383 Commits

Author SHA1 Message Date
Cayetano Santos f18a45499a gnu: bowtie: Update to 2.5.4. 
* gnu/packages/bioinformatics.scm (bowtie): Update to 2.5.4.
[source]: Use G-Expressions in ’snippet.
[arguments]: Use G-Expressions.
<#:make-flags>: Add CC.
<#:phases>: Add ’tests? arguments to ’check phase; add ’fix-prefix.
[inputs]: Drop variables, add onetbb, delete tbb-2020 and
python-wrapper.
[native-inputs]: Add python-wrapper, which and perl-file-which.

Merges guix/guix!5491

Change-Id: I12686b06911c11170748b64af722c5311b2e542d
 2026-01-28 14:03:59 +01:00
Patrick Norton adfeff04bc gnu: iotop: Update to 1.31. 
* gnu/packages/linux.scm (iotop): Update to 1.31.

Closes: guix/guix#5961
Change-Id: I1f15cb19542d9be4a738adf113bded904e4d3b6a
Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2026-01-28 18:31:55 +08:00
Ashish SHUKLA 039695115f gnu: knot: Update to 3.5.3. 
* gnu/packages/dns.scm (knot): Update to 3.5.3.

Closes: guix/guix#5984
Change-Id: Iffe0cc8e828c99bd8c3345cbb656369425a438f0
Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2026-01-28 18:31:51 +08:00
Thomas Kramer 33209c4ff5 gnu: Add python-gdstk. 
* gnu/packages/electronics.scm (python-gdstk): New variable

Merges guix/guix!5798

Change-Id: I00e6ae26aaf741acd24caceba6d3181ab83ed692
Signed-off-by: Cayetano Santos <csantosb@inventati.org>
 2026-01-28 10:21:26 +01:00
Thomas Kramer e3fe03c5ed gnu: Add gdstk. 
* gnu/packages/electronics.scm (gdstk): New variable

Merges guix/guix!5798

Change-Id: Ic159f22e31fadb7f348bf768b1e23e0ef71d2331
Signed-off-by: Cayetano Santos <csantosb@inventati.org>
 2026-01-28 10:21:17 +01:00
Cayetano Santos 59dbdc642a gnu: emacs-lsp-mode: Update to 9.0.1-1.328c979. 
* gnu/packages/emacs-xyz.scm (emacs-lsp-mode): Update to
9.0.1-1.328c979.
[arguments]: Update #:emacs.

Change-Id: I79a5da405f9ef77e9a8376db421c3709a69e2fb4
 2026-01-28 09:07:27 +01:00
Clombrong 8dc57904e3 services: Add endlessh-service-type. 
* docs/guix.texi: Document EndleSSH service and configuration.
* gnu/services/ssh.scm: New service.
* gnu/services/ssh.scm: Define shepherd service.

Merges: https://codeberg.org/guix/guix/pulls/5910
Co-Authored-By: Giacomo Leidi <therewasa@fishinthecalculator.me>
Change-Id: Ief4520b536276b88f2e5027ef0897bf84b2835df
Signed-off-by: Giacomo Leidi <therewasa@fishinthecalculator.me>
 2026-01-27 11:46:03 +01:00
Daniel Khodabakhsh 3f5ebde420 gnu: Add node-typescript. 
* gnu/packages/node-xyz.scm (node-typescript): New variable.

Change-Id: Ief680a973c6f4f98837db3b2b15109c10fda8c6e
Signed-off-by: Andreas Enge <andreas@enge.fr>
 2026-01-27 10:39:46 +01:00
Daniel Khodabakhsh 116f04b948 gnu: Add node-types-source-map-support. 
* gnu/packages/node-xyz.scm (node-types-source-map-support): New variable.

Change-Id: I4bfda700f971ad4b8ec2d04ff510e263f94d94bd
Signed-off-by: Andreas Enge <andreas@enge.fr>
 2026-01-27 10:39:46 +01:00
Daniel Khodabakhsh 526e87d09f gnu: Add node-types-node. 
* gnu/packages/node-xyz.scm (node-types-node): New variable.

Change-Id: I31801972ed59743856d56585aad450aa8368baea
Signed-off-by: Andreas Enge <andreas@enge.fr>
 2026-01-27 10:39:46 +01:00
Daniel Khodabakhsh ee7d8a74a6 gnu: Add node-chalk. 
* gnu/packages/node-xyz.scm (node-chalk): New variable.

Change-Id: Ia267af1f10b4b322682ceb44d0bae7d9ee0dc30b
Signed-off-by: Andreas Enge <andreas@enge.fr>
 2026-01-27 10:39:46 +01:00
Daniel Khodabakhsh a93c9ae66c gnu: Add node-command-line-usage. 
* gnu/packages/node-xyz.scm (node-command-line-usage): New variable.

Change-Id: I30410f1287e1a4aa07ea159e160bc7c6e79073ed
Signed-off-by: Andreas Enge <andreas@enge.fr>
 2026-01-27 10:39:46 +01:00
Daniel Khodabakhsh 58e6543f6b gnu: Add node-hereby. 
* gnu/packages/node-xyz.scm (node-hereby): New variable.

Change-Id: Ide051fbc2be3d80f70a45f1030211e20fbc9f9bf
Signed-off-by: Andreas Enge <andreas@enge.fr>
 2026-01-27 10:39:46 +01:00
Daniel Khodabakhsh 5c98e5269a gnu: Add node-glob. 
* gnu/packages/node-xyz.scm (node-glob): New variable.

Change-Id: I8a16ef870f604cac35cda534b49006c7f746895e
Signed-off-by: Andreas Enge <andreas@enge.fr>
 2026-01-27 10:39:45 +01:00
Daniel Khodabakhsh 0342cecbac gnu: Add node-minimatch. 
* gnu/packages/node-xyz.scm (node-minimatch): New variable.

Change-Id: Ided488ef27a54d680681d966845e6e8cee74c0f3
Signed-off-by: Andreas Enge <andreas@enge.fr>
 2026-01-27 10:39:45 +01:00
Daniel Khodabakhsh edaab3e577 gnu: Add node-table-layout. 
* gnu/packages/node-xyz.scm (node-table-layout): New variable.

Change-Id: I52722b5c23f877e0e11efca970a55a9bff4941eb
Signed-off-by: Andreas Enge <andreas@enge.fr>
 2026-01-27 10:39:45 +01:00
Daniel Khodabakhsh 3081706ffa gnu: Add node-wordwrapjs. 
* gnu/packages/node-xyz.scm (node-wordwrapjs): New variable.

Change-Id: I7a85881db3e2ce9cd99517b655b53add55ee7158
Signed-off-by: Andreas Enge <andreas@enge.fr>
 2026-01-27 10:39:45 +01:00
Daniel Khodabakhsh 46d3c833c6 gnu: Add node-ansi-styles. 
* gnu/packages/node-xyz.scm (node-ansi-styles): New variable.

Change-Id: I5ea900aae7a16418d442de5cd058eed5e18a7cbc
Signed-off-by: Andreas Enge <andreas@enge.fr>
 2026-01-27 10:39:45 +01:00
Daniel Khodabakhsh c40a927df6 gnu: Add node-brace-expansion. 
* gnu/packages/node-xyz.scm (node-brace-expansion): New variable.

Change-Id: I3d2d96c5a888d3e70ed23248e7e02b3a92ae14c2
Signed-off-by: Andreas Enge <andreas@enge.fr>
 2026-01-27 10:39:45 +01:00
Daniel Khodabakhsh 2371b45028 gnu: Add node-fast-xml-parser. 
* gnu/packages/node-xyz.scm (node-fast-xml-parser): New variable.

Change-Id: I1e569fed347895d0409b65110f184e90f7d9222c
Signed-off-by: Andreas Enge <andreas@enge.fr>
 2026-01-27 10:39:45 +01:00
Daniel Khodabakhsh 6649e34002 gnu: Add node-minipass-7. 
* gnu/packages/node-xyz.scm (node-minipass-7): New variable.

Change-Id: I9a7fa292a8117795959a3f45cb300d9e07fd6a45
Signed-off-by: Andreas Enge <andreas@enge.fr>
 2026-01-27 10:39:45 +01:00
Daniel Khodabakhsh aae52b37be gnu: Add node-path-scurry. 
* gnu/packages/node-xyz.scm (node-path-scurry): New variable.

Change-Id: I39598efc068bc706a481d121f6b0c5615a83effc
Signed-off-by: Andreas Enge <andreas@enge.fr>
 2026-01-27 10:39:45 +01:00
Daniel Khodabakhsh 6d11b2c0c0 gnu: Add node-pretty-ms. 
* gnu/packages/node-xyz.scm (node-pretty-ms): New variable.

Change-Id: I77eb83b965af37f31076766d4a0e795e61d64ab7
Signed-off-by: Andreas Enge <andreas@enge.fr>
 2026-01-27 10:39:45 +01:00
Daniel Khodabakhsh efe368426f gnu: Add node-source-map-support. 
* gnu/packages/node-xyz.scm (node-source-map-support): New variable.

Change-Id: Ie975afe66498a174a78536c0075c53306a73593d
Signed-off-by: Andreas Enge <andreas@enge.fr>
 2026-01-27 10:39:45 +01:00
Daniel Khodabakhsh f868a14709 gnu: Add node-supports-color. 
* gnu/packages/node-xyz.scm (node-supports-color): New variable.

Change-Id: I00d7701662e4d3752426aca5aece879fa8d15c79
Signed-off-by: Andreas Enge <andreas@enge.fr>
 2026-01-27 10:39:45 +01:00
Daniel Khodabakhsh d44c3fc267 gnu: Add node-which. 
* gnu/packages/node-xyz.scm (node-which): New variable.

Change-Id: I31434c264ba2df58ed74eb3f35a97faea327ddf6
Signed-off-by: Andreas Enge <andreas@enge.fr>
 2026-01-27 10:39:45 +01:00
Daniel Khodabakhsh b02a4eefbd gnu: Add node-balanced-match. 
* gnu/packages/node-xyz.scm (node-balanced-match): New variable.

Change-Id: I91006e112da75c54a777bf6da83d5d939a7de9d1
Signed-off-by: Andreas Enge <andreas@enge.fr>
 2026-01-27 10:39:44 +01:00
Daniel Khodabakhsh 029db9af52 gnu: Add node-color-convert. 
* gnu/packages/node-xyz.scm (node-color-convert): New variable.

Change-Id: Ifc3061862a5d0abbad0fedf1b36ea4f9e554b418
Signed-off-by: Andreas Enge <andreas@enge.fr>
 2026-01-27 10:39:44 +01:00
Daniel Khodabakhsh 333b5bba9d gnu: Add node-dprint-formatter. 
* gnu/packages/node-xyz.scm (node-dprint-formatter): New variable.

Change-Id: I3b850a1a3d821f125f52d02718c49c7252ed0247
Signed-off-by: Andreas Enge <andreas@enge.fr>
 2026-01-27 10:39:44 +01:00
Daniel Khodabakhsh 433fd24130 gnu: Add node-jsonc-parser. 
* gnu/packages/node-xyz.scm (node-jsonc-parser): New variable.

Change-Id: I4a482d482b587006bac621161c01a31ab8c16a55
Signed-off-by: Andreas Enge <andreas@enge.fr>
 2026-01-27 10:39:44 +01:00
Daniel Khodabakhsh 9ac0df45ee gnu: Add node-array-back. 
* gnu/packages/node-xyz.scm (node-array-back): New variable.

Change-Id: I348ce710940d8309c1fb55313425541061644228
Signed-off-by: Andreas Enge <andreas@enge.fr>
 2026-01-27 10:39:44 +01:00
Daniel Khodabakhsh 145d4ca98e gnu: Add node-buffer-from. 
* gnu/packages/node-xyz.scm (node-buffer-from): New variable.

Change-Id: Id90afe871a323fa513832544c222560a0954da0a
Signed-off-by: Andreas Enge <andreas@enge.fr>
 2026-01-27 10:39:44 +01:00
Daniel Khodabakhsh 4ce6be078a gnu: Add node-deep-extend. 
* gnu/packages/node-xyz.scm (node-deep-extend): New variable.

Change-Id: I567a994e57e48d54e5a938cd56fb4d98445448c7
Signed-off-by: Andreas Enge <andreas@enge.fr>
 2026-01-27 10:39:44 +01:00
Daniel Khodabakhsh 0cb873f173 gnu: Add node-escape-string-regexp. 
* gnu/packages/node-xyz.scm (node-escape-string-regexp): New variable.

Change-Id: I5879164912380f9880313bf45349c42a270f4c07
Signed-off-by: Andreas Enge <andreas@enge.fr>
 2026-01-27 10:39:44 +01:00
Daniel Khodabakhsh 3ca4d943fe gnu: Add node-fastest-levenshtein. 
* gnu/packages/node-xyz.scm (node-fastest-levenshtein): New variable.

Change-Id: I452ea3174da66509b199c38031ae6e5ca08f1a85
Signed-off-by: Andreas Enge <andreas@enge.fr>
 2026-01-27 10:39:44 +01:00
Daniel Khodabakhsh 9ce61658d1 gnu: Add node-has-flag. 
* gnu/packages/node-xyz.scm (node-has-flag): New variable.

Change-Id: I75d3d85928e8f3cd884ce9dc3a6c20927f62965a
Signed-off-by: Andreas Enge <andreas@enge.fr>
 2026-01-27 10:39:44 +01:00
Daniel Khodabakhsh 699ddb16dd gnu: Add node-isexe. 
* gnu/packages/node-xyz.scm (node-isexe): New variable.

Change-Id: I412db97f7c94d3eed15edf9ca9a27f843a3079aa
Signed-off-by: Andreas Enge <andreas@enge.fr>
 2026-01-27 10:39:44 +01:00
Daniel Khodabakhsh bde545386f gnu: Add node-lru-cache. 
* gnu/packages/node-xyz.scm (node-lru-cache): New variable.

Change-Id: Ic09c6608d11554d0e67935dab87a0f681d1ca49b
Signed-off-by: Andreas Enge <andreas@enge.fr>
 2026-01-27 10:39:44 +01:00
Daniel Khodabakhsh 333f7c1709 gnu: Add node-minipass-5. 
* gnu/packages/node-xyz.scm (node-minipass-url): New variable.

Change-Id: Ib3edc6d85aa3e279751b296870d6ed1f571affcf
Signed-off-by: Andreas Enge <andreas@enge.fr>
 2026-01-27 10:39:43 +01:00
Daniel Khodabakhsh 6765faeb84 gnu: Add node-undici-types. 
* gnu/packages/node-xyz.scm (node-undici-types): New variable.

Change-Id: I2a958fa4b7aeda01587105fe1027607df7677851
Signed-off-by: Andreas Enge <andreas@enge.fr>
 2026-01-27 10:39:43 +01:00
Daniel Khodabakhsh 7d94b835e9 gnu: node-minimist: Update to 1.2.8. 
* gnu/packages/node-xyz.scm (node-minimist): Update to 1.2.8.

Change-Id: Ie9eb70530a2870365794c4d3b2432dddc4e27361
Signed-off-by: Andreas Enge <andreas@enge.fr>
 2026-01-27 10:39:43 +01:00
Daniel Khodabakhsh 9de7fa194d gnu: Add node-parse-ms. 
* gnu/packages/node-xyz.scm (node-parse-ms): New variable.

Change-Id: I9d12b5acff3122276e7074c9b77ba1b3d109a4fd
Signed-off-by: Andreas Enge <andreas@enge.fr>
 2026-01-27 10:39:43 +01:00
Daniel Khodabakhsh dd7dac883e gnu: Add node-picocolors. 
* gnu/packages/node-xyz.scm (node-picocolors): New variable.

Change-Id: I60c0bbf7b2ea058f398f81dfcf635165ffd1b027
Signed-off-by: Andreas Enge <andreas@enge.fr>
 2026-01-27 10:39:43 +01:00
Daniel Khodabakhsh a98bfe26fb gnu: Add node-reduce-flatten. 
* gnu/packages/node-xyz.scm (node-reduce-flatten): New variable.

Change-Id: Ib8887489b53f1e4cad033ddeffe597a7d3ad6dfa
Signed-off-by: Andreas Enge <andreas@enge.fr>
 2026-01-27 10:39:43 +01:00
Daniel Khodabakhsh 5eab0ad523 gnu: Add node-source-map. 
* gnu/packages/node-xyz.scm (node-source-map): New variable.

Change-Id: I13e2be02c270f18f300eb61ad3504b8bfceda5cd
Signed-off-by: Andreas Enge <andreas@enge.fr>
 2026-01-27 10:39:43 +01:00
Daniel Khodabakhsh 89ad8677b0 gnu: Add node-strnum. 
* gnu/packages/node-xyz.scm (node-strnum): New variable.

Change-Id: I33988e4fd6eca9b81c650b171b777af747056760
Signed-off-by: Andreas Enge <andreas@enge.fr>
 2026-01-27 10:39:43 +01:00
Daniel Khodabakhsh ba1e0dc41a gnu: Add node-typical. 
* gnu/packages/node-xyz.scm (node-typical): New variable.

Change-Id: I0053fc63f641b1ba6e294931496b41ab6e33dc86
Signed-off-by: Andreas Enge <andreas@enge.fr>
 2026-01-27 10:39:35 +01:00
Efraim Flashner 1cad718948 gnu: make-rust-sysroot: Remove cross-gcc work-around. 
* gnu/packages/rust.scm (make-rust-sysroot/implementation)
[native-inputs]: Remove gcc-14.

Change-Id: Ia2c8dcff4b3fac5f7d61d7890e35f769e7bdc1bf
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2026-01-27 10:55:49 +02:00
Cayetano Santos 149c5bf876 gnu: emacs-marginalia: Update to 2.9. 
* gnu/packages/emacs-xyz.scm (emacs-marginalia): Update to 2.9.

Change-Id: I2976a02f3636919dbc0c68b39cc40210d72dfb9b
 2026-01-27 09:28:12 +01:00
Cayetano Santos 0a0bc22694 gnu: emacs-cape: Update to 2.5. 
* gnu/packages/emacs-xyz.scm (emacs-cape): Update to 2.5.

Change-Id: I5343780d4323d33d163d6d7a03e1e0fa032a1621
 2026-01-27 09:28:12 +01:00