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162,723 Commits 75 Branches 40 Tags
fa1eababe33edac7f5f31e20fa854842b9c7a4de
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150480 Commits

Author SHA1 Message Date
Maxim Cournoyer
fa1eababe3 gnu: Add gomacro. 
* gnu/packages/go-apps.scm (gomacro): New variable.

Change-Id: Ie3575a72baacb2ea3010d727d27f2d50749f93ea
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2025-06-22 21:36:44 +01:00
jgart
8f97502396 gnu: python-diskcache: Update to 5.6.3. 
* gnu/packages/python-xyz.scm (python-diskcache): Update to 5.6.3.
[source]: Use GitHub origin since PyPI missing docs which are needed for
tests.
[build-system]: Use pyproject-build-system.
[native-inputs]: Add required native-inputs.

Change-Id: I169c24c02356407902a69cc4937a4761be47b6e6
 2025-06-22 15:54:19 -04:00
Cayetano Santos
60c6133a98 gnu: emacs-guix: Update to 0.5.2-8.66b9350. 
* gnu/packages/emacs-xyz.scm (emacs-guix): Update to 0.5.2-8.66b9350.
[source]: Update URL.

Change-Id: Ie6ebba6ff4e070ca03de91f4e316f6e48707e37d
Signed-off-by: Ian Eure <ian@retrospec.tv>
 2025-06-22 12:42:40 -07:00
Giacomo Leidi
1aca7d3be8 gnu: prometheus-postgres-exporter. 
* gnu/packages/monitoring.scm (prometheus-postgres-exporter): New variable.

Change-Id: I32c922244dbd485d0b882e7b150fc8c7d5624875
Modified-by: Sharlatan Hellseher <sharlatanus@gmail.com>
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2025-06-22 18:09:25 +01:00
Vinicius Monego
8696eca5c0 gnu: python-pyjanitor: Update to 0.31.0. 
* gnu/packages/python-science.scm (python-pyjanitor): Update to 0.31.0.
[arguments]<#:test-flags>: Skip tests depending on Polars. Enable
previously failing test.
<#:phases>: Delete unnecessary phase 'pandas-compat'.

Change-Id: I2991e06fafea2928bb6ea45c42624bf372da2eba
 2025-06-22 12:41:00 -03:00
Vinicius Monego
e660638d0d gnu: python-pingouin: Update to 0.5.5. 
* gnu/packages/python-science.scm (python-pingouin): Update to 0.5.5.
[arguments]<#:test-flags>: Enable previously failing test. Skip two more
failing tests.
<#:phases>: Delete unnecessary phases 'loosen-requirements',
'remove-outdated-check', 'sklearn-compatibility'.

Change-Id: Iac44747d65c9be52831ae792a24b9cc5604c54dc
 2025-06-22 12:41:00 -03:00
Vinicius Monego
d32e619d47 gnu: python-simple-pid: Update to 2.0.1. 
* gnu/packages/python-science.scm (python-simple-pid): Update to 2.0.1.
[source]: Update URI.
[build-system]: Use pyproject-build-system.
[arguments]<#:phases>: Do not override the 'check' phase.
[native-inputs]: Add python-pytest, python-setuptools, python-wheel.

Change-Id: I26c7b3097d30ac067a370c8a3a0600779d13efb6
 2025-06-22 12:41:00 -03:00
Vinicius Monego
4a38059258 gnu: python-pandas-flavor: Update to 0.7.0. 
* gnu/packages/python-science.scm (python-pandas-flavor): Update to
0.7.0.
[build-system]: Use pyproject-build-system.
[native-inputs]: Add python-pytest.

Change-Id: Ie582c778d84b342eab41f8bc88f2c4bb410bbbb6
 2025-06-22 12:40:59 -03:00
Vinicius Monego
5b983cd239 gnu: python-baycomp: Update to 1.0.3. 
* gnu/packages/python-science.scm (python-baycomp): Update to 1.0.3.
[build-system]: Use pyproject-build-system.
[native-inputs]: Add python-pytest, python-setuptools, python-wheel.

Change-Id: I2249fc981a91ebc175a5e0ff221bb6243126fb6f
 2025-06-22 12:40:59 -03:00
Cayetano Santos
d437b9cb46 gnu: emacs-org-roam-bibtex: Update to 0.6.2-0.b065198. 
* gnu/packages/emacs-xyz.scm (emacs-org-roam-bibtex): Update to 0.6.2-0.b065198.

Change-Id: I6db838df4a9b120c0bfda964cf5fe1d903a1e571
Signed-off-by: jgart <jgart@dismail.de>
 2025-06-22 11:29:05 -04:00
Vinicius Monego
272fc9c223 gnu: pelican: Enable tests. 
* gnu/packages/python-xyz.scm (pelican)[arguments]: Remove '#:tests?'.
<#:test-flags>: Skip three failing tests.
[native-inputs]: Add python-anyio, python-beautifulsoup4, python-lxml,
python-pytest, python-smartypants, python-typogrify.

Change-Id: Ibcbfa1a405753bfcf68028be86a90c1c318cb1b7
 2025-06-22 11:21:48 -03:00
Vinicius Monego
a4892265fa gnu: pelican: Update to 4.11.0. 
* gnu/packages/python-xyz.scm (pelican): Update to 4.11.0.
[build-system]: Use pyproject-build-system.
[native-inputs]: Add python-pdm-backend.
[inputs]: Remove python-markdown, python-pytz. Add python-ordered-set,
python-tzdata, python-watchfiles.

Change-Id: I586668a17b7b646227a5bd78703fda2c9bc6fb63
 2025-06-22 11:21:48 -03:00
Vinicius Monego
a44710fc63 gnu: python-feedgenerator: Update to 2.1.0. 
* gnu/packages/python-xyz.scm (python-feedgenerator): Update to 2.1.0.
[source]: Remove unnecessary snippet.
[build-system]: Use pyproject-build-system.
[native-inputs]: Add python-pytest, python-pytest-cov,
python-setuptools, python-wheel.
[propagated-inputs]: Remove python-six.

Change-Id: I2451794d21c0c473183f9f90f14ad8b198883455
 2025-06-22 11:21:48 -03:00
Vinicius Monego
97b3b63fcd gnu: python-scapy: Update to 2.6.1. 
* gnu/packages/python-xyz.scm (python-scapy): Update to 2.6.1.
[build-system]: Use pyproject-build-system.
[native-inputs]: Add python-setuptools, python-wheel.

Change-Id: I56f0f87e0eb1a49bd79cad6f36451dfdd6eb78e0
 2025-06-22 11:21:44 -03:00
Kjartan Oli Agustsson
f731d71846 gnu: tetoolkit: Run guix style 
* gnu/packages/bioinformatics.scm (tetoolkit): Run guix style.

Change-Id: I5f4c6a647a41a9d60e5bc1d2b4fbee045626dc12
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2025-06-22 12:54:11 +01:00
Kjartan Oli Agustsson
09a3e09fa8 gnu: tetoolkit: Use pyproject-build-system. 
* gnu/packages/bioinformatics.scm (tetoolkit): [build-system]: Use
pyproject.
[native-inputs]: Add python-setuptools and python-wheel.

Change-Id: I4fce644bee87c5d6c64a9a3cdf3581a1bae12909
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2025-06-22 12:54:11 +01:00
Kjartan Oli Agustsson
825ceadb5f gnu: tbsp: Run guix style 
* gnu/packages/bioinformatics.scm (tbsp): Run guix style.

Change-Id: I3301f95963aac1f47b28e86a40374df2171732f8
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2025-06-22 12:54:11 +01:00
Kjartan Oli Agustsson
8ed2fcd5aa gnu: tbsp: Use pyproject-build-system. 
* gnu/packages/bioinformatics.scm (tbsp): [build-system]: Use
pyproject.
[native-inputs]: Add python-setuptools and python-wheel.

Change-Id: I6d454d95050862378b7f06c09a42994efd9875a6
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2025-06-22 12:54:11 +01:00
Kjartan Oli Agustsson
abeb7cd9fa gnu: stpipeline: Run guix style 
* gnu/packages/bioinformatics.scm (stpipeline): Run guix style.

Change-Id: I341e0b7adce82c079b1dcff94a2128d3e1773a4a
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2025-06-22 12:54:10 +01:00
Kjartan Oli Agustsson
3bb992a357 gnu: stpipeline: Use pyproject-build-system. 
* gnu/packages/bioinformatics.scm (stpipeline): [build-system]: Use
pyproject.
[native-inputs]: Add python-setuptools and python-wheel.

Change-Id: Ibfeea2feb08878d14becf15be5408689ba4c7c3f
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2025-06-22 12:54:10 +01:00
Kjartan Oli Agustsson
18d5c62c6a gnu: python-vireosnp: Run guix style 
* gnu/packages/bioinformatics.scm (python-vireosnp): Run guix style.

Change-Id: I301322fbfa45b3ef7cb1c82eadc60aa1de33d442
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2025-06-22 12:54:10 +01:00
Kjartan Oli Agustsson
b7ec773e5a gnu: python-vireosnp: Use pyproject-build-system. 
* gnu/packages/bioinformatics.scm (python-vireosnp): [build-system]: Use
pyproject.
[native-inputs]: Add python-setuptools and python-wheel.

Change-Id: Id49911001b3672402a17f0902a7e5a565168ab61
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2025-06-22 12:54:10 +01:00
Kjartan Oli Agustsson
002d6e4109 gnu: python-velocyto: Run guix style 
* gnu/packages/bioinformatics.scm (python-velocyto): Run guix style.

Change-Id: Ieda2b56cf13ae519e539ecef286ef63595532a7a
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2025-06-22 12:54:10 +01:00
Kjartan Oli Agustsson
5853163fbf gnu: python-velocyto: Use pyproject-build-system. 
* gnu/packages/bioinformatics.scm (python-velocyto): [build-system]: Use
pyproject.
[native-inputs]: Add python-setuptools and python-wheel.

Change-Id: Ie5e605136a7eb7a1acd3850313f2796bf7c83c31
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2025-06-22 12:54:10 +01:00
Kjartan Oli Agustsson
5eebea1b76 gnu: python-slamdunk: Run guix style 
* gnu/packages/bioinformatics.scm (python-slamdunk): Run guix style.

Change-Id: I5235a49f7c2d128df6c903f35908fefe022fd50a
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2025-06-22 12:54:10 +01:00
Kjartan Oli Agustsson
9aff205c4f gnu: python-slamdunk: Use pyproject-build-system. 
* gnu/packages/bioinformatics.scm (python-slamdunk): [build-system]: Use
pyproject.
[native-inputs]: Add python-setuptools and python-wheel.

Change-Id: I935dd9a0a7c08985dfb7ca989346783ebf024d50
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2025-06-22 12:54:10 +01:00
Kjartan Oli Agustsson
15c4134067 gnu: python-scanorama: Run guix style 
* gnu/packages/bioinformatics.scm (python-scanorama): Run guix style.

Change-Id: I43bfbe845f6e54dab94c6e0055ee811f70026ab4
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2025-06-22 12:54:10 +01:00
Kjartan Oli Agustsson
492035dfa8 gnu: python-scanorama: Use pyproject-build-system. 
* gnu/packages/bioinformatics.scm (python-scanorama): [build-system]: Use
pyproject.
[native-inputs]: Add python-setuptools and python-wheel.

Change-Id: Ie437414bff54c361ab61ee2e9baea670762c9ce5
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2025-06-22 12:54:10 +01:00
Kjartan Oli Agustsson
673a485a6b gnu: python-pyliftover: Run guix style 
* gnu/packages/bioinformatics.scm (python-pyliftover): Run guix style.

Change-Id: I45bf0066db834fd99a2bbc1e64d4bc3e20e92cde
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2025-06-22 12:54:09 +01:00
Kjartan Oli Agustsson
66ab4c5bc1 gnu: python-pyliftover: Use pyproject-build-system. 
* gnu/packages/bioinformatics.scm (python-pyliftover): [build-system]: Use
pyproject.
[native-inputs]: Add python-setuptools and python-wheel.

Change-Id: Ifcdbfba497527edd82625a20e4baf6b2504f3f92
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2025-06-22 12:54:09 +01:00
Kjartan Oli Agustsson
0809db9016 gnu: python-pyfit-sne: Use pyproject-build-system. 
* gnu/packages/bioinformatics.scm (python-pyfit-sne): [build-system]: Use
pyproject.
[native-inputs]: Add python-setuptools and python-wheel.

Change-Id: I8f62f2dc30d2bd182a791830bb835adf778d2ecf
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2025-06-22 12:54:09 +01:00
Kjartan Oli Agustsson
247afd63f2 gnu: python-ikarus: Run guix style 
* gnu/packages/bioinformatics.scm (python-ikarus): Run guix style.

Change-Id: I493beb55986808a8ba27eadcc48d8a2a20b1678e
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2025-06-22 12:54:09 +01:00
Kjartan Oli Agustsson
1ff6229402 gnu: python-ont-fast5-api: Use pyproject-build-system. 
* gnu/packages/bioinformatics.scm (python-ont-fast5-api): [build-system]: Use
pyproject.
[native-inputs]: Add python-setuptools and python-wheel.

Change-Id: Idb3b5a65767998e232fcc31534cb923ea6f5fed8
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2025-06-22 12:54:09 +01:00
Kjartan Oli Agustsson
7c405b8da9 gnu: python-ikarus: Use pyproject-build-system. 
* gnu/packages/bioinformatics.scm (python-ikarus): [build-system]: Use
pyproject.
[native-inputs]: Add python-setuptools and python-wheel.

Change-Id: Idb3b5a65767998e232fcc31534cb923ea6f5fed8
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2025-06-22 12:54:09 +01:00
Kjartan Oli Agustsson
78039c3e61 gnu: porechop: Use pyproject-build-system. 
* gnu/packages/bioinformatics.scm (porechop): [build-system]: Use
pyproject.
[native-inputs]: Add python-setuptools, python-wheel, and python-pytest.

Change-Id: I77444786f3e64591c2dc526fb030cecdbb30a3c1
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2025-06-22 12:54:09 +01:00
Kjartan Oli Agustsson
c1b7cf51dc gnu: gdc-client: Run guix style 
* gnu/packages/bioinformatics.scm (gdc-client): Run guix style.

Change-Id: I5dc3f65e622354a66ff71365f6dfd052da951297
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2025-06-22 12:54:09 +01:00
Kjartan Oli Agustsson
81e55bc0d5 gnu: gdc-client: Use pyproject-build-system. 
* gnu/packages/bioinformatics.scm (gdc-client): [build-system]: Use
pyproject.
[native-inputs]: Add python-setuptools and python-wheel.

Change-Id: Ifa6ddfab7ddfc90ecdc5838484b3763f1f653e81
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2025-06-22 12:54:09 +01:00
Kjartan Oli Agustsson
50ece4e78f gnu: crossmap: Run guix style 
* gnu/packages/bioinformatics.scm (crossmap): Run guix style.

Change-Id: I56a0ba0e7f5fd24e02a5a769efa7b7e6bda5603b
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2025-06-22 12:54:08 +01:00
Kjartan Oli Agustsson
1a5fa2c3b2 gnu: crossmap: Use pyproject-build-system. 
* gnu/packages/bioinformatics.scm (crossmap): [build-system]: Use
pyproject.
[native-inputs]: Add python-setuptools and python-wheel.

Change-Id: I1750685ad8037d004fc1d5fc4f7f76613f257c17
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2025-06-22 12:54:08 +01:00
Kjartan Oli Agustsson
313519348b gnu: clipper-peak: Run guix style 
* gnu/packages/bioinformatics.scm (clipper-peak): Run guix style.

Change-Id: I93c3aea922b1d493d004b401eb312cba63ae4d74
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2025-06-22 12:54:08 +01:00
Kjartan Oli Agustsson
a694de3938 gnu: clipper-peak: Use pyproject-build-system. 
* gnu/packages/bioinformatics.scm (clipper-peak): [build-system]: Use
pyproject.
[native-inputs]: Add python-setuptools and python-wheel.

Change-Id: I6cae7d463a412b6736413e80346e377ccb14c290
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2025-06-22 12:54:08 +01:00
Kjartan Oli Agustsson
1eda883414 gnu: ciri-long: Run guix style 
* gnu/packages/bioinformatics.scm (ciri-long): Run guix style.

Change-Id: I97e5bd025474ea4ba4f2781f523bc7f5c38fb8e8
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2025-06-22 12:54:08 +01:00
Kjartan Oli Agustsson
dbfce79477 gnu: ciri-long: Use pyproject-build-system. 
* gnu/packages/bioinformatics.scm (ciri-long): [build-system]: Use pyproject.

Change-Id: Ie4ff2f95cfe1988bb2b75eb78bda77b8c4259105
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2025-06-22 12:54:08 +01:00
Kjartan Oli Agustsson
aeb5fd0a24 gnu: checkm: Use pyproject-build-system. 
* gnu/packages/bioinformatics.scm (checkm): Run guix style.
[build-system]: Use pyproject.
[native-inputs]: Add python-setuptools and python-wheel.

Change-Id: I7d3214c29a7e2b3a6065336632f534a2c4cefbbc
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2025-06-22 12:54:04 +01:00
Andrew Wong
20ee2f57bc gnu: Add bemoji. 
* gnu/packages/xdisorg.scm (bemoji): New variable.

Change-Id: If1df8f6d50647c2c4efd7ab294891cc2698385c0
Signed-off-by: Steve George <steve@futurile.net>
 2025-06-22 11:36:03 +01:00
Janneke Nieuwenhuizen
357a6a31cf gnu: 389-ds-base: Fix build with gcc-14. 
* gnu/packages/openldap.scm (389-ds-base)[arguments]: Add CFLAGS to #:configure-flags
to relax gcc-14's strictness.

Change-Id: I54510c0d0d0f9032f4f5043053b0282e0a4ffb9e
Modified-by: Zheng Junjie <z572@z572.online>
 2025-06-22 16:32:56 +08:00
Janneke Nieuwenhuizen
06539b1607 gnu: midori: Fix build with gcc-14. 
* gnu/packages/web-browsers.scm (midori)[arguments]: Add #:configure-flags to
relax gcc-14's strictness.

Change-Id: I5495e04836fb469db9d5c418cf53ef2e653c8751
Modified-by: Zheng Junjie <z572@z572.online>
 2025-06-22 16:32:56 +08:00
Janneke Nieuwenhuizen
405f796495 gnu: cheese: Fix build with gcc-14. 
* gnu/packages/gnome.scm (cheese)[arguments]: Add stage
"relax-gcc-14-strictness".

Change-Id: Idaf34cfe9f91f055a1ab570c003bc15394f7021f
 2025-06-22 16:32:56 +08:00
Janneke Nieuwenhuizen
1a4823ef2a gnu: freerdp: Fix build with gcc-14. 
* gnu/packages/rdesktop.scm (freerdp)[arguments]: Add -DCMAKE_C_FLAGS to
relax gcc-14's strictness.

Change-Id: I7a655245820ab97aeafa21c6a8591b9a5a05fabc
Modified-by: Zheng Junjie <z572@z572.online>
 2025-06-22 16:32:56 +08:00
Janneke Nieuwenhuizen
825275d783 gnu: caribou: Fix build with gcc-14. 
* gnu/packages/gnome.scm (caribou)[arguments]: Use G-Expressions.  Add CFLAGS
to #:configure-flags to relax gcc-14's strictness.

Change-Id: I78bf5b03029112aa17977b2947e5446e90150f11
Modified-by: Zheng Junjie <z572@z572.online>
 2025-06-22 16:32:55 +08:00