gnu: ant/java8: Rename to ant.

* gnu/packages/java.scm (ant): Rename to...
(ant/java7): ...this.
(ant/java8): Rename to...
(ant): ...this.
(java-qdox-1.12, java-jarjar, java-hamcrest-core, java-hamcrest-parent-pom)
(java-junit, java-org-ow2-parent-pom-1.3, java-asm-bootstrap): Rename
inputs accordingly.
* gnu/packages/axoloti.scm: Rename accordingly.
* gnu/packages/bioinformatics.scm: idem.
* gnu/packages/groovy.scm: idem.
* gnu/packages/java-maths.scm: idem.
* guix/build-system/ant.scm: idem.

Change-Id: I9d79ce8e351862747420fc2a58301b7f61212293

.dir-locals.el

@@ -42,12 +42,9 @@
      ;; For use with 'bug-reference-prog-mode'.  Extra bug-reference
      ;; configuration should be done in your Emacs user configuration file;
      ;; refer to (info (guix) The Perfect Setup).
-     (eval . (setq-local bug-reference-bug-regexp
+     (bug-reference-bug-regexp
-                         ;; #8545 (issues), !8545 (PRs), guix/guix#8545 and
+      . "\\(<https?://\\bugs\\.gnu\\.org/\\([0-9]+\\)>\\)")
-                         ;; guix/guix!8545
+     (bug-reference-url-format . "https://issues.guix.gnu.org/%s")
-                         (rx (group (seq (? "guix/guix") (or "#" "!"))
-                                    (group (one-or-more digit))))))
-     (bug-reference-url-format . "https://codeberg.org/guix/guix/issues/%s")
 
      (eval . (add-to-list 'completion-ignored-extensions ".go"))
 

.guix-authorizations

@@ -16,8 +16,6 @@
   ( ;; primary: "D0C2 EAC1 3310 822D 98DE  B57C E9C5 A2D9 0898 A02F"
    "01FD 85F4 1A7B 7F82 0583  06A5 935E BE07 36DC 857E"
    (name "avp"))
-  ("5D54 CF25 57B2 38E8 8DC1  80A2 2D22 3241 0AB7 4043"
-   (name "baleine"))
   ( ;; primary: "34FF 38BC D151 25A6 E340  A0B5 3453 2F9F AFCA 8B8E"
    "A3A4 B419 0074 087C A7DE  5698 BC45 CA67 E2F8 D007"
    (name "bavier"))

CODEOWNERS

@@ -32,7 +32,6 @@ gnu/packages/assembly\.scm                         @guix/build-tools
 gnu/packages/autogen\.scm                          @guix/build-tools
 gnu/packages/autotools\.scm                        @guix/build-tools
 gnu/packages/bison\.scm                            @guix/build-tools
-gnu/packages/compiler-tools\.scm                   @guix/build-tools
 gnu/packages/m4\.scm                               @guix/build-tools
 gnu/packages/oyacc\.scm                            @guix/build-tools
 gnu/packages/re2c\.scm                             @guix/build-tools
@@ -162,8 +161,6 @@ gnu/system/examples/bare-bones\.tmpl               @guix/documentation
 gnu/system/examples/lightweight-desktop\.tmpl      @guix/documentation
 gnu/system/examples/desktop\.tmpl                  @guix/documentation
 
-gnu/packages/dotnet\.scm                           @guix/dotnet
-
 gnu/packages/electronics\.scm                      @guix/electronics
 gnu/packages/hdl\.scm                              @guix/electronics
 gnu/packages/libftdi\.scm                          @guix/electronics
@@ -182,7 +179,6 @@ guix/scripts/import/elpa\.scm                      @guix/emacs
 tests/import/elpa\.scm                             @guix/emacs
 
 gnu/packages/bootloaders\.scm                      @guix/embedded
-gnu/packages/coreboot\.scm                         @guix/embedded
 gnu/packages/firmware\.scm                         @guix/embedded
 
 gnu/packages/emulators\.scm                        @guix/games
@@ -267,7 +263,6 @@ gnu/installer(\.scm$|/)                            @guix/installer
 gnu/packages/clojure\.scm                          @guix/java
 gnu/packages/java(-.+|)\.scm$                      @guix/java
 gnu/packages/maven(-.+|)\.scm$                     @guix/java
-gnu/packages/netbeans\.scm                         @guix/java
 guix/build/ant-build-system\.scm                   @guix/java
 guix/build/clojure-build-system\.scm               @guix/java
 guix/build/clojure-utils\.scm                      @guix/java
@@ -278,7 +273,6 @@ guix/build-system/ant\.scm                         @guix/java
 guix/build-system/clojure\.scm                     @guix/java
 guix/build-system/maven\.scm                       @guix/java
 
-gnu/packages/javascript\.scm                       @guix/javascript
 gnu/packages/node-xyz\.scm                         @guix/javascript
 gnu/packages/node\.scm                             @guix/javascript
 guix/build-system/node\.scm                        @guix/javascript
@@ -292,12 +286,12 @@ guix/build-system/julia\.scm                       @guix/julia
 
 gnu/packages/(kde)(-.+|)\.scm$                     @guix/kde
 
-gnu/build/linux-modules\.scm                       @guix/linux-libre
+gnu/build/linux-modules\.scm                       @guix/kernel
-gnu/packages/aux-files/linux-libre.*$              @guix/linux-libre
+gnu/packages/aux-files/linux-libre.*$              @guix/kernel
-gnu/packages/linux\.scm                            @guix/linux-libre
+gnu/packages/linux\.scm                            @guix/kernel
-gnu/tests/linux-modules\.scm                       @guix/linux-libre
+gnu/tests/linux-modules\.scm                       @guix/kernel
-guix/build/linux-module-build-system\.scm          @guix/linux-libre
+guix/build/linux-module-build-system\.scm          @guix/kernel
-guix/build-system/linux-module\.scm                @guix/linux-libre
+guix/build-system/linux-module\.scm                @guix/kernel
 
 gnu/packages/lisp(-.+|)\.scm$                      @guix/lisp
 guix/build/asdf-build-system\.scm                  @guix/lisp
@@ -324,7 +318,6 @@ gnu/packages/tor-browsers\.scm                     @guix/mozilla
 
 gnu/packages/ocaml\.scm                            @guix/ocaml
 gnu/packages/coq\.scm                              @guix/ocaml
-gnu/packages/rocq\.scm                             @guix/ocaml
 guix/build/ocaml-build-system\.scm                 @guix/ocaml
 guix/build/dune-build-system\.scm                  @guix/ocaml
 guix/build-system/ocaml\.scm                       @guix/ocaml
@@ -341,7 +334,6 @@ guix/build-system/rakudo\.scm                      @guix/perl
 guix/import/cpan\.scm                              @guix/perl
 guix/scripts/import/cpan\.scm                      @guix/perl
 
-gnu/packages/aux-files/python/.*\.py$              @guix/python
 gnu/packages/django\.scm                           @guix/python
 gnu/packages/jupyter\.scm                          @guix/python
 gnu/packages/python(-.+|)\.scm$                    @guix/python

Makefile.am

@@ -457,8 +457,6 @@ AUX_FILES =						\
   gnu/packages/aux-files/findclass.php			\
   gnu/packages/aux-files/guix.vim			\
   gnu/packages/aux-files/guix-nvim.vim			\
-  gnu/packages/aux-files/linux-libre/7.0-arm64.conf	\
-  gnu/packages/aux-files/linux-libre/7.0-x86_64.conf	\
   gnu/packages/aux-files/linux-libre/6.19-arm64.conf	\
   gnu/packages/aux-files/linux-libre/6.19-i686.conf	\
   gnu/packages/aux-files/linux-libre/6.19-x86_64.conf	\
@@ -488,7 +486,6 @@ AUX_FILES =						\
   gnu/packages/aux-files/linux-libre/5.10-x86_64.conf	\
   gnu/packages/aux-files/ovmf/51-edk2-ovmf-2m-raw-x64-nosb.json	\
   gnu/packages/aux-files/pack-audit.c			\
-  gnu/packages/aux-files/python/pytest_guix.py		\
   gnu/packages/aux-files/python/sanity-check.py		\
   gnu/packages/aux-files/python/sitecustomize.py	\
   gnu/packages/aux-files/renpy/renpy.in	\
@@ -1281,14 +1278,6 @@ $(GIT_HOOKS_DIR):
 $(GIT_HOOKS_DIR)/%: etc/git/% | $(GIT_HOOKS_DIR)/
 	if [ -n "$(GIT_HOOKS_DIR)" ]; then cp "$<" "$@"; fi
 
-# Special-case the pre-push hook installation, to ensure it is always
-# up-to-date with its source.
-.PHONY: $(GIT_HOOKS_DIR)/pre-push
-$(GIT_HOOKS_DIR)/pre-push: etc/git/pre-push | $(GIT_HOOKS_DIR)
-	@if [ -n "$(GIT_HOOKS_DIR)" ]; then \
-	  cmp "--silent" "$<" "$@" || cp "$<" "$@"; \
-	fi
-
 $(GIT_CONFIG_FILE): etc/git/gitconfig
 	if [ -n "$(GIT_CONFIG_FILE)" ]; then \
 	  git config --fixed-value --replace-all include.path \

build-aux/test-env.in

@@ -120,7 +120,6 @@ running 'guix-daemon $extra_options'" >&2
     "@abs_top_builddir@/pre-inst-env"				\
 	"@abs_top_builddir@/guix-daemon"			\
         $extra_options						\
-        --allow-aslr                                            \
 	--substitute-urls="$GUIX_BINARY_SUBSTITUTE_URL" &
 
     daemon_pid=$!

doc/build.scm

@@ -1,5 +1,5 @@
 ;;; GNU Guix --- Functional package management for GNU
-;;; Copyright © 2019-2026 Ludovic Courtès <ludo@gnu.org>
+;;; Copyright © 2019-2025 Ludovic Courtès <ludo@gnu.org>
 ;;; Copyright © 2020 Björn Höfling <bjoern.hoefling@bjoernhoefling.de>
 ;;; Copyright © 2022 Maxim Cournoyer <maxim@guixotic.coop>
 ;;; Copyright © 2025 Florian Pelz <pelzflorian@pelzflorian.de>
@@ -324,31 +324,17 @@ actual file name."
                     ((('span ('@ ('class "category")) ;raw Texinfo 6.8
                              (? string-or-entity?) ...) rest ...)
                      #t)
-                    ((('span                      ;Texinfo 6, post-processed
+                    ((('span ('@ ('class "symbol-definition-category"))
-                       ('@ ('class "symbol-definition-category"))
+                             (? string-or-entity?) ...) rest ...)
-                       (? string-or-entity?) ...) rest ...)
-                     #t)
-                    ((('span                      ;Texinfo 7
-                       ('@ ('class "category-def")) _ ...)
-                      ('span ('strong ('@ ('class "def-name")) _ ...)
-                             _ ...)
-                      rest ...)
                      #t)
                     (x
                      #f))))
 
-              (define (definition-class? class)
-                ;; Return true for "deffn def-line", "deftp def-line", etc.
-                (string-suffix? " def-line" class))
-
               (let ((shtml (call-with-input-file file html->shtml)))
                 (let loop ((shtml shtml)
                            (anchors anchors))
                   (match shtml
-                    ((or ('dt ('@ ('id id) _ ...) rest ...)      ;Texinfo 6
+                    (('dt ('@ ('id id) _ ...) rest ...)
-                         ('dt ('@ ('class (? definition-class?)) ;Texinfo 7
-                                  ('id id))
-                              rest ...))
                      (if (and (string-prefix? "index-" id)
                               (worthy-entry? rest))
                          (alist-cons (anchor-id->key id)
@@ -519,16 +505,10 @@ its <pre class=\"lisp\"> blocks (as produced by 'makeinfo --html')."
                    (loop rest (cons str strings)))
                   ((('*ENTITY* "additional" entity) . rest)
                    (loop rest (cons (entity->string entity) strings)))
-                  ((('*ENTITY* "additional-char" entity) . rest)
-                   (loop rest (cons (string
-                                     (integer->char (string->number entity)))
-                                    strings)))
                   ((('span _ lst ...) . rest)     ;for <span class="roman">
                    (loop (append lst rest) strings))
-                  ((('var ('@ _) name) . rest)    ;for @var{name} within @lisp
+                  ((('var name) . rest)           ;for @var{name} within @lisp
                    (loop rest (cons name strings))) ;XXX: losing formatting
-                  ((('var name) . rest)           ;likewise (Texinfo 6)
-                   (loop rest (cons name strings)))
                   (something
                    (pk 'unsupported-code-snippet something)
                    (primitive-exit 1)))))
@@ -557,10 +537,7 @@ its <pre class=\"lisp\"> blocks (as produced by 'makeinfo --html')."
                           (link (@ (rel "stylesheet")
                                    (type "text/css")
                                    (href #$syntax-css-url)))))
-                  ((or ('pre ('@ ('class "lisp")) ;Texinfo 6
+                  (('pre ('@ ('class "lisp")) code-snippet ...)
-                             code-snippet ...)
-                       ('pre ('@ ('class "lisp-preformatted"))
-                             code-snippet ...))
                    `(pre (@ (class "lisp"))
                          ,@(highlights->sxml*
                             (pair-open/close
@@ -568,16 +545,14 @@ its <pre class=\"lisp\"> blocks (as produced by 'makeinfo --html')."
                                         (concatenate-snippets code-snippet)))
                             anchors)))
 
-                  ;; For Texinfo 6: Replace the ugly <strong> used for @deffn
+                  ;; Replace the ugly <strong> used for @deffn etc., which
-                  ;; etc., which translate to <dt>, with more stylable
+                  ;; translate to <dt>, with more stylable markup.
-                  ;; markup.  No such post-processing is needed for @deffn
-                  ;; with Texinfo 7.
                   (('dt ('@ ('id id))             ;raw Texinfo 6.8
                         ('span ('@ ('class "category")) category ...)
                         ('span ('strong thing)
                                anchor))
                    (highlight-definition id category thing '()))
-                  (('dt ('@ ('id id))             ;ditto
+                  (('dt (@ ('id id))
                         ('span ('@ ('class "category")) category ...)
                         ('span ('strong thing)
                                (? space?) ('em args ...)
@@ -833,9 +808,16 @@ in SOURCE."
                 (match sxml
                   (('*TOP* decl body ...)
                    `(*TOP* ,decl ,@(map loop body)))
-                  ((or ('body ('@ _) elements ...)
+                  (('head elements ...)
-                       ('body elements ...))
+                   ;; Add reference to our own manual CSS, which provides
-                   `(body ,(navigation-bar
+                   ;; support for the language menu.
+                   `(head ,@elements
+                          (link (@ (rel "stylesheet")
+                                   (type "text/css")
+                                   (href #$manual-css-url)))))
+                  (('body ('@ attributes ...) elements ...)
+                   `(body (@ ,@attributes)
+                          ,(navigation-bar
                             ;; TODO: Add "Contribute" menu, to report
                             ;; errors, etc.
                             (list (menu-dropdown
@@ -970,12 +952,12 @@ makeinfo OPTIONS."
                         (mkdir-p (string-append #$output "/"
                                                 (normalize language)))
                         (setenv "LANGUAGE" language)
-                        (apply invoke #$(file-append texinfo-7 "/bin/makeinfo")
+                        (apply invoke #$(file-append texinfo "/bin/makeinfo")
                                "-o" (string-append #$output "/"
                                                    (normalize language)
                                                    "/html_node")
                                opts)
-                        (apply invoke #$(file-append texinfo-7 "/bin/makeinfo")
+                        (apply invoke #$(file-append texinfo "/bin/makeinfo")
                                "--no-split"
                                "-o"
                                (string-append #$output "/"
@@ -1427,7 +1409,7 @@ commit date (an integer)."
                                  (string-append #+tar "/bin:"
                                                 #+xz "/bin:"
                                                 #+zstd "/bin:"
-                                                #+texinfo-7 "/bin"))
+                                                #+texinfo "/bin"))
                          (invoke "tar" "xf" #$(package-source guile))
                          (mkdir-p (string-append #$output "/en/html_node"))
 
@@ -1446,7 +1428,7 @@ commit date (an integer)."
                               (string-append #$output "/en/html_node")))))))))
 
 (define %guile-manual-base-url
-  "https://doc.guix.gnu.org/guile/latest/en")
+  "https://www.gnu.org/software/guile/manual")
 
 (define (for-all-languages index)
   (map (lambda (language)

doc/contributing.texi

@@ -618,33 +618,6 @@ enhance @code{scheme-mode} and Geiser.  @xref{Introduction,,,
 emacs-guix, Emacs-Guix Reference Manual}, to make sure you don't miss
 out!
 
-@unnumberedsubsubsec Submitting Pull Requests Following the AGit Workflow
-
-@cindex AGit workflow, for pull requests (Emacs).
-@url{https://codeberg.org/halvin/agitjo, Agitjo} is a helper to ease
-AGit workflow based patch submission (@pxref{Submitting Patches}).
-Install it with:
-
-@example
-guix install emacs-agitjo
-@end example
-
-Assuming your local checkout is on the branch containing the changes you
-would like to submit for inclusion in the @code{master} branch, use
-@command{M-x agitjo-push} then:
-
-@itemize
-@item
-Set options like the title @option{-t} and the session identifier
-@option{-s}.
-@item
-Invoke one of the push commands to execute a @command{git push} operation.
-@end itemize
-
-When creating a new pull request, a dedicated buffer will open for
-drafting a description. The force-push option @option{-f} is enabled to
-push changes to the existing pull request.
-
 @unnumberedsubsubsec Taming Boilerplate with Templates
 
 @cindex code snippets
@@ -733,7 +706,13 @@ Manual}).  To set it up, enable it in the relevant modes:
 
 When working from a Git checkout of Guix, setup is automatic:
 @code{bug-reference} automatically detects that the project is hosted on
-Codeberg and infers the issue and pull request URL from there.
+Codeberg@footnote{
+@c 'vc-git-repository-url' is used by
+@c 'bug-reference-setup-from-vc-alist', which checks for one of these
+@c names for the remote.
+As of Emacs@tie{}30.2, auto-detection works if and
+only if the Git remote is called @code{upstream} or @code{origin}.} and
+infers the issue and pull request URL from there.
 
 @node Guile Studio
 @subsection Guile Studio
@@ -1688,9 +1667,6 @@ can be turned into a version string via @code{git-version}, for example
 @code{rust-pipewire-0.8.0.fd3d8f7} and @code{rust-pubgrub-0.3.0.b70cf70}.
 @end table
 
-When contributing Rust packages, we should have all modifications to these
-two modules, in the same commit as the package we are contributing.
-
 To avoid merge conflicts with changes from multiple branches, these two modules
 are maintained by the Rust team (@pxref{Teams}).
 
@@ -1720,68 +1696,6 @@ tree.
 @xref{Packaging Rust Crates,,, guix-cookbook, GNU Guix Cookbook}, for
 packaging workflow.
 
-@subsubsection Commit messages
-
-The commit message must have a general brief mention to entry changes
-in @code{(gnu packages rust-crates)}. For changes in @code{(gnu packages
-rust-sources)}, the commit message must explicitly mention all changes to the
-packages.
-
-Here are some examples for different situations:
-
-@itemize
-
-@item
-Adding a new Rust package:
-
-@example
-gnu: Add catppuccin-whiskers.
-
-* gnu/packages/rust-apps.scm (catppuccin-whiskers): New variable.
-* gnu/packages/rust-crates.scm (lookup-cargo-inputs)
-[catppuccin-whiskers]: New entry.
-@end example
-
-@item
-Updating a simple package:
-
-@example
-gnu: watchexec: Update to 2.3.2.
-
-* gnu/packages/rust-apps.scm (watchexec): Update to 2.3.2.
-* gnu/packages/rust-crates.scm (lookup-cargo-inputs)[watchexec]:
-Update entry.
-@end example
-
-@item
-Updating a package with sources:
-
-@example
-gnu: typst: Update to 0.14.0.
-
-* gnu/packages/rust-apps.scm (typst): Update to 0.14.0.
-[arguments]<#:rust>: Use rust-1.88.
-* gnu/packages/rust-crates.scm (lookup-cargo-inputs)[typst]: Update
-entry.
-[rust-syntect-5]: Rename to rust-syntect-5.2.
-[rust-syntect-5.3]: New entry.
-* gnu/packages/rust-sources.scm (rust-hypher-0.1): Update to 0.1.6.
-(rust-syntect-5): Rename to rust-syntect-5.2.
-[inputs]: Rename cargo-inputs rust-syntect-5 to rust-syntect-5.2.
-(rust-syntect-5.3): New variable.
-@end example
-
-@end itemize
-
-@subsubsection Resolving merge conflicts in Pull Requests
-
-For Rust crates, the recommended way to solve merge conflicts is to drop all
-changes to @code{gnu/packages/rust-crates.scm}, rebase onto the desired branch
-and run the lockfile importer again, manually adding back all relevant snippets
-(if any).
-
-@xref{Common Workflow for Resolving Merge Conflicts on Existing Pull Requests,,, guix-cookbook, GNU Guix Cookbook} for
-a suggested workflow on resolving merge conflicts.
 
 @node Elm Packages
 @subsection Elm Packages
@@ -2736,7 +2650,6 @@ applications settings page}, granting read/write access to the
 
 @cindex decision making
 @cindex consensus seeking
-Every contribution to the project involves a form of decision making.
 It is expected from all contributors, and even more so from committers,
 to help build consensus and make decisions based on consensus.  By using
 consensus, we are committed to finding solutions that everyone can live
@@ -2751,26 +2664,6 @@ resolve the deadlock.  To learn what consensus decision making means and
 understand its finer details, you are encouraged to read
 @url{https://www.seedsforchange.org.uk/consensus}.
 
-Day-to-day decision making, for instance discussions about pull requests
-(@pxref{Reviewing the Work of Others}), happens informally among
-interested parties such as contributors and members of the relevant
-teams (@pxref{Teams}).
-
-@cindex GCD, Guix Consensus Documents
-@cindex Guix Consensus Documents (GCD)
-Decisions that are expected to have an impact on most contributors
-and/or on the broader user community---e.g., changes to project-wide
-policies, to core functionality, and so on---are made following the
-@acronym{GCD, Guix Consensus Document} process.  The process provides a
-framework to formalize proposals and draw attention to them, to leave
-time for interested parties to discuss them, and to collectively accept
-or withdraw them based on input from participating team members.  It is
-defined in
-@uref{https://consensus.guix.gnu.org/gcd/001-gcd-process.html,
-GCD@tie{}001}.  Past GCDs can be seen at
-@uref{https://consensus.guix.gnu.org}, and discussions take place at
-@uref{https://codeberg.org/guix/guix-consensus-documents}.
-
 @node Commit Access
 @section Commit Access
 

doc/guix-cookbook.texi

@@ -146,8 +146,6 @@ Packaging Rust Crates
 * Common Workflow for Rust Packaging::
 * Cargo Workspaces and Development Snapshots::
 * Using Rust Libraries in Other Build Systems::
-* Common Workflow for Updating Existing Rust Packages::
-* Common Workflow for Resolving Merge Conflicts on Existing Pull Requests::
 
 System Configuration
 
@@ -646,11 +644,9 @@ This field contains a description of the source code origin.  The
 
 @enumerate
 @item  The method, here @code{url-fetch} to download via HTTP/FTP, but other methods
-    exist, such as @code{git-fetch} for Git repositories.  @xref{origin
+    exist, such as @code{git-fetch} for Git repositories.
-    Reference,,, guix, GNU Guix Reference Manual}, for more info on the
-    available download methods.
 @item  The URI, which is typically some @code{https://} location for @code{url-fetch}.  Here
-    the special @code{mirror://gnu} refers to a set of well known locations, all of
+    the special `mirror://gnu` refers to a set of well known locations, all of
     which can be used by Guix to fetch the source, should some of them fail.
 @item  The @code{sha256} checksum of the requested file.  This is essential to ensure
     the source is not corrupted.  Note that Guix works with base32 strings,
@@ -1118,8 +1114,7 @@ Let's discuss those fields in depth.
 @subsubsection @code{git-fetch} method
 
 Unlike the @code{url-fetch} method, @code{git-fetch} expects a @code{git-reference} which takes
-a Git repository and a commit (@pxref{origin Reference,,, guix, GNU Guix
+a Git repository and a commit.  The commit can be any Git reference such as
-Reference Manual}).  The commit can be any Git reference such as
 tags, so if the @code{version} is tagged, then it can be used directly.  Sometimes
 the tag is prefixed with a @code{v}, in which case you'd use @code{(commit (string-append
 "v" version))}.
@@ -1165,7 +1160,7 @@ Snippets might need additional Guile modules which can be imported from the
 
 There are 3 different input types.  In short:
 
-@table @code
+@table @asis
 @item native-inputs
 Required for building but not runtime -- installing a package
 through a substitute won't install these inputs.
@@ -1233,14 +1228,9 @@ It's advised to separate outputs only when you've shown it's worth it: if the
 output size is significant (compare with @code{guix size}) or in case the package is
 modular.
 
-@xref{Packages with Multiple Outputs,,, guix, GNU Guix Reference
-Manual}, for more info.
-
 @subsubsection Build system arguments
 
-The @code{arguments} is a keyword-value list used to configure the build
+The @code{arguments} is a keyword-value list used to configure the build process.
-process; these arguments are passed to the @dfn{build system}
-(@pxref{Build Systems,,, guix, GNU Guix Reference Manual}).
 
 The simplest argument @code{#:tests?} can be used to disable the test suite when
 building the package.  This is mostly useful when the package does not feature
@@ -1256,7 +1246,7 @@ following flags
                    "CC=gcc")
 @end lisp
 
-translate into:
+translate into
 
 @example
 $ make CC=gcc prefix=/gnu/store/...-<out>
@@ -1276,9 +1266,7 @@ Similarly, it's possible to set the configure flags:
 The @code{%build-inputs} variable is also generated in scope.  It's an association
 table that maps the input names to their store directories.
 
-The @code{phases} keyword lists the sequential steps of the build
+The @code{phases} keyword lists the sequential steps of the build system.  Typically
-system.  @xref{Build Phases,,, guix, GNU Guix Reference Manual}, for
-details; in a nutshell,
 phases include @code{unpack}, @code{configure}, @code{build}, @code{install} and @code{check}.  To know
 more about those phases, you need to work out the appropriate build system
 definition in @samp{$GUIX_CHECKOUT/guix/build/gnu-build-system.scm}:
@@ -1393,12 +1381,10 @@ Its return value is ignored.
 
 @subsubsection Code staging
 
-The astute reader may have noticed the hash-tilde and hash-dollar syntax in the
+The astute reader may have noticed the quasi-quote and comma syntax in the
 argument field.  Indeed, the build code in the package declaration should not be
 evaluated on the client side, but only when passed to the Guix daemon.  This
 mechanism of passing code around two running processes is called @uref{https://arxiv.org/abs/1709.00833, code staging}.
-@xref{G-Expressions,,, guix, GNU Guix Reference Manual}, for info on the
-this mechanism, which is called @dfn{g-expressions}.
 
 @subsubsection Utility functions
 
@@ -1407,7 +1393,7 @@ equivalent system invocations (@code{make}, @code{mkdir}, @code{cp}, etc.)@: com
 regular ``Unix-style'' installations.
 
 Some like @code{chmod} are native to Guile.
-@xref{File System,,, guile, Guile reference manual} for a complete list.
+@xref{,,, guile, Guile reference manual} for a complete list.
 
 Guix provides additional helper functions which prove especially handy in the
 context of package management.
@@ -1541,9 +1527,9 @@ The recursive importer won't import packages for which Guix already has package
 definitions, except for the very first.
 
 Not all applications can be packaged this way, only those relying on a select
-number of supported systems.
+number of supported systems.  Read about the full list of importers in
-@xref{Invoking guix import,,, guix, GNU Guix Reference Manual} for
+the guix import section of the manual
-the full list of importers.
+(@pxref{Invoking guix import,,, guix, GNU Guix Reference Manual}).
 
 @node Automatic update
 @subsubsection Automatic update
@@ -1563,9 +1549,6 @@ well:
 $ guix refresh hello --update
 @end example
 
-@xref{Invoking guix refresh,,, guix, GNU Guix Reference Manual}, for
-more info.
-
 @node Inheritance
 @subsubsection Inheritance
 
@@ -1590,9 +1573,7 @@ noticed that a significant number of them have a @code{inherit} field:
 
 All unspecified fields are inherited from the parent package.  This is very
 convenient to create alternative packages, for instance with different source,
-version or compilation options.  @xref{Defining Package Variants,,, guix,
+version or compilation options.
-GNU Guix Reference Manual}, for a discussion of inheritance and of other
-ways to create package variants.
 
 @node Getting help
 @subsection Getting help
@@ -1633,8 +1614,7 @@ hopefully we will see your contributions soon!
 
 @itemize
 @item
-@xref{Defining Packages,,, guix, GNU Guix Reference Manual}, for the
+The @uref{https://guix.gnu.org/manual/en/html_node/Defining-Packages.html, package reference in the manual}
-@code{package} reference in the manual.
 
 @item
 @uref{https://gitlab.com/pjotrp/guix-notes/blob/master/HACKING.org, Pjotr’s hacking guide to GNU Guix}
@@ -1667,8 +1647,6 @@ $ guix shell rust rust:cargo cargo-audit cargo-license
 * Common Workflow for Rust Packaging::
 * Cargo Workspaces and Development Snapshots::
 * Using Rust Libraries in Other Build Systems::
-* Common Workflow for Updating Existing Rust Packages::
-* Common Workflow for Resolving Merge Conflicts on Existing Pull Requests::
 @end menu
 
 @node Common Workflow for Rust Packaging
@@ -1727,15 +1705,6 @@ $ cargo audit
 $ cargo license
 @end example
 
-@quotation Note
-Before running @command{cargo generate-lockfile}, make sure you have checked
-out the correct tag for the version you are packaging. This ensures that
-@code{Cargo.toml} matches the file used in the packages's @code{source} field.
-To make sure, you can obtain the exact source with @command{./pre-inst-env guix
-build --source <package>} and only then run @command{cargo generate-lockfile} on
-that source tree.
-@end quotation
-
 @command{cargo generate-lockfile} updates dependencies to compatible versions.
 Applying it to all Rust applications helps reduce a great number of Rust
 libraries we need to check later.  Although sometimes libraries may fail to
@@ -2018,316 +1987,6 @@ method, one of the most popular choices for Traditional Chinese users.")
     (license license:lgpl2.1+)))
 @end lisp
 
-@node Common Workflow for Updating Existing Rust Packages
-@subsubsection Common Workflow for Updating Existing Rust Packages
-
-For this example, we'll update @code{niri}. The package definition looks like
-this initially:
-
-@lisp
-(define-public niri
-  (package
-   (name "niri")
-   (version "25.08")
-   (source (origin
-             (method git-fetch)
-             (uri (git-reference
-                   (url "https://github.com/YaLTeR/niri")
-                   (commit (string-append "v" version))))
-             (file-name (git-file-name name version))
-             (sha256
-              (base32
-               "09nsxd211mly8r1ys2lq6ia4jxgb980h1axrbgw748r0knfbbj7n"))))
-   (build-system cargo-build-system)
-...
-@end lisp
-
-We start by running the usual @command{guix refresh -u niri}.
-
-The @command{-u} flag will update in place the version and hash for the
-@code{niri} package.
-
-The package definition will then look like this:
-
-@lisp
-(define-public niri
-  (package
-   (name "niri")
-   (version "25.11")
-   (source (origin
-             (method git-fetch)
-             (uri (git-reference
-                   (url "https://github.com/YaLTeR/niri")
-                   (commit (string-append "v" version))))
-             (file-name (git-file-name name version))
-             (sha256
-              (base32
-               "0752qm245wc2gak0jhp0fnr0rdj3z54m2h97k3cxbjym9pcn658n"))))
-   (build-system cargo-build-system)
-...
-@end lisp
-
-This means the source field was updated successfully, thus we can now proceed to
-get the updated source with @command{guix build --source niri} as follows:
-
-@example shell
-$ cp -r $(./pre-inst-env guix build --source niri) /tmp
-$ cd /tmp/<hash>-niri-25.11-checkout/
-@end example
-
-@quotation Note
-In this specific example, the source is a git checkout, thus a directory. If the
-package source is a compressed archive, you would at this point extract it to a
-directory to proceed.
-@end quotation
-
-Now, given that we have access to the @code{Cargo.toml} file, we can now run
-the following inside the checkout:
-
-@example shell
-$ guix shell rust rust:cargo -- cargo generate-lockfile
-$ guix shell rust rust:cargo -- cargo audit
-$ guix shell rust rust:cargo -- cargo license
-@end example
-
-@quotation Note
-Sometimes the package will require a more up-to-date version of rust, that is
-not yet the default rust on guix. For these cases you can use:
-@example shell
-$ guix shell -e "(@ (gnu packages rust) rust-1.90)" \
-     -e '`(,(@ (gnu packages rust) rust-1.90) "cargo")'
-@end example
-@end quotation
-
-The first command will ensure that all cargo dependencies are up to date
-and semver compatible, while also providing some other benefits, as further
-explained in @ref{Common Workflow for Rust Packaging}.
-
-The following command will warn if there are any known vulnerabilities in the
-crates being imported. The last one will output the license information of all
-the dependent crates.
-
-If everything looks good, we can now replace the contents of the @code{niri}
-indentifier, located inside the @code{lookup-cargo-inputs} variable on the
-bottom of the @file{gnu/packages/rust-crates.scm} module, with the newer updated
-crates by running the importer on the lockfile as follows:
-
-@example shell
-$ guix import -i /path/to/gnu/packages/rust-crates.scm \
-     crate -f Cargo.lock niri
-@end example
-
-@quotation Note
-For the purpose of contributing a package to Guix (@pxref{Contributing,,,
-guix, GNU Guix Reference Manual}), there is no need to cleanup the leftover
-crates as a result of the package update.  This is tasked to the rust-team
-(@pxref{Teams,,, guix, GNU Guix Reference Manual}) to periodically run a
-convenient script in @code{etc/teams/rust} to cleanup unused crates from
-@file{gnu/packages/rust-crates.scm}.
-@end quotation
-
-We then need to check whether the importer has placed some TODOs for us,
-inside @file{gnu/packages/rust-crates.scm} (you can use @command{git diff --
-gnu/packages/rust-crates.scm} for this purpose).
-
-There are a few types of TODO messages that you might encounter during this
-step, each type requiring you to perform a different action.
-
-The first one we encounter in our example is:
-
-@lisp
-(define rust-libdisplay-info-sys-0.3.0
-  ;; TODO REVIEW: Check bundled sources.
-  (crate-source "libdisplay-info-sys" "0.3.0"
-                "07xmkc2aqcdn6d58321y87rd3gzdr4nx3ncm1mmrr7w1p1ahsn96"))
-@end lisp
-
-This specific TODO message tells us that there is a high probability of
-encountering bundled sources within a crate definition generated by the
-importer.
-
-We then check if there are any bundled sources within the
-@code{rust-libdisplay-info-sys-0.3.0} crate. Since there are none (in our
-example), we can simply remove the TODO line, and continue to the next TODO.
-
-If there were any bundled sources inside the crate, we would have to patch
-it with a snippet, in order to unbundle it. You can see some examples on
-how to unbundle inside @file{gnu/packages/rust-crates.scm} (search for the
-@code{#:snippet} keyword).
-
-@quotation Note
-If the unbundle is considered too difficult to be executed (e.g. the effort
-needed to unbundle is unreasonable), the @code{TODO REVIEW} line should be
-converted to a regular TODO comment explicitly stating the unbundle was not done
-(e.g. @code{TODO: Unbundle rust-libdisplay-info-sys.}).
-@end quotation
-
-Continuing, another TODO message we encounter in this example is the following:
-
-@lisp
-(define rust-smithay-0.7.0.d743e1a
-  ;; TODO REVIEW: Define standalone package if this is a workspace.
-  (origin
-    (method git-fetch)
-    (uri (git-reference (url "https://github.com/Smithay/smithay.git")
-                        (commit "d743e1a317fa0f01d1c4cadd96d277a1ec7b59d9")))
-    (file-name (git-file-name "rust-smithay" "0.7.0.d743e1a"))
-    (sha256 (base32 "11327mhxxf844bs0v5bw1g9bzjssnzhidsissywy6kwng16x727v"))))
-@end lisp
-
-This specific TODO message tells us that there is a high probability of the
-@code{rust-smithay-0.7.0.d743e1a} crate being a workspace.
-
-After verifying that it is indeed a workspace, we now need to make it an
-actual package in @file{gnu/packages/rust-sources.scm}, referencing it in the
-crate-source definition (see @ref{Common Workflow for Rust Packaging} for more
-details).
-
-@quotation Note
-You can verify if a crate is a workspace by cloning the crate repository (in
-this case @code{https://github.com/Smithay/smithay.git}), checking out the
-specific revision (in this case @command{git checkout d743e1a}), and looking
-for @code{[workspace]} in its main @file{Cargo.toml} file. If it does not have a
-TOML @code{[workspace]} section, then it is not a workspace.
-@end quotation
-
-After defining the separate source package for the workspace in
-@file{gnu/packages/rust-sources.scm} (see @ref{Common Workflow for Rust
-Packaging} for more details on how to do this), the crate definition for
-@code{rust-smithay-0.7.0.d743e1a} would then become the following (notice we
-also remove the TODO line):
-
-@lisp
-(define rust-smithay-0.7.0.d743e1a package:rust-smithay-0.7.0.d743e1a)
-@end lisp
-
-If @code{rust-smithay-0.7.0.d743e1a} was not a workspace, we would simply remove
-the TODO line and move on.
-
-We then try to build the package with @command{guix build niri}, and make sure
-whether it builds successfully, which it does.
-
-As a good practice, we can further check the output of the
-@code{check-for-pregenerated-files} phase to ensure there are no extraneous
-pregenerated files inside the crates. If there are any, it is important to
-snippet them out, like these:
-
-@lisp
-(define rust-winapi-x86-64-pc-windows-gnu-0.4.0
-  (crate-source "winapi-x86_64-pc-windows-gnu" "0.4.0"
-                "0gqq64czqb64kskjryj8isp62m2sgvx25yyj3kpc2myh85w24bki"
-                #:snippet '(delete-file-recursively "lib")))
-
-(define rust-flate2-1.1.4
-  (crate-source "flate2" "1.1.4"
-                "1a8a3pk2r2dxays4ikc47ygydhpd1dcxlgqdi3r9kiiq9rb4wnnw"
-                #:snippet '(for-each delete-file-recursively '("examples" "tests"))))
-
-(define rust-flo-curves-0.3.1
-  (crate-source "flo_curves" "0.3.1"
-                "16x293dp8825jh465kgms4yyvl4960j26gh37h3skflq9zxpy8hw"
-                #:snippet '(for-each delete-file '("logo-small.png" "logo.png"))))
-
-(define rust-interception-sys-0.1.3
-  (crate-source "interception-sys" "0.1.3"
-                "1lgwbml7gzq5a5rriy708w68gx6yiw9cdg7xy2c5vsrrck7pbs5b"
-                #:snippet '(for-each delete-file (find-files "." "\\.(dll|lib)$"))))
-@end lisp
-
-@node Common Workflow for Resolving Merge Conflicts on Existing Pull Requests
-@subsubsection Common Workflow for Resolving Merge Conflicts on Existing Pull Requests
-
-Whenever a Rust package change is merged into our target branch from a different
-Pull Request, we often encounter many merge conflicts in @code{(gnu packages
-rust-crates)} when rebasing the Pull Request on top of the target branch. Since
-we should avoid modifying the rust-crates file manually (e.g. using the git
-interface to solve merge conflicts), it is recommended (and often much faster)
-to drop all changes to @code{(gnu packages rust-crates)} and run the lockfile
-importer once again, manually adding back all the manual changes.
-
-This workflow describes one of many ways to do the described procedure.
-
-In this example we'll update the @code{codeberg-cli} package, which has produced
-some merge conflicts in @file{gnu/packages/rust-crates.scm} when we tried a git
-pull rebase.
-
-Before starting, make sure we're not in a rebase environment, by aborting the
-rebase we tried previously (the one which created the merge conflicts by git
-pulling):
-
-@example
-$ git rebase --abort
-@end example
-
-@cindex git rebase --interactive
-@cindex interactive rebase
-To begin, we interactively rebase our PR branch by marking as
-@code{edit} the commit we want to edit, which is the one containing the
-@file{gnu/packages/rust-crates.scm} changes:
-
-@example
-# Change 1 to the number of relevant commits
-$ git rebase -i HEAD~1
-@end example
-
-In our example, we would mark the @code{codeberg-cli} commit like so:
-
-@example
-edit 6ef4f1ad043 # gnu: codeberg-cli: Update to 0.5.4.
-@end example
-
-After that, we'll be in rebase mode, where we can restore the changes made to
-@file{gnu/packages/rust-crates.scm}:
-
-@quotation Note
-Notice that we will lose all manual changes we have previously made to
-@file{gnu/packages/rust-crates.scm} (e.g. snippets, deleting TODO comments,
-if there were any). We'll need to manually add them back after we run the guix
-lockfile importer once again, so make sure you have them saved somewhere, for
-example in your PR link under the @code{Files changed} tab.
-@end quotation
-
-@example
-$ git restore --source=HEAD~ gnu/packages/rust-crates.scm
-@end example
-
-Having restored the file, we can stage the changes, commit, finish the rebase
-and pull rebase from the target branch:
-
-@example
-$ git add gnu/packages/rust-crates.scm
-$ git commit --amend --no-edit
-$ git rebase --continue
-$ git pull <remote> <target branch>
-@end example
-
-We then proceed to run the guix lockfile importer:
-
-@quotation Note
-Remember to checkout the correct tag you're packaging in the package repository
-checkout. Don't forget to run @code{cargo generate-lockfile} before running
-the lockfile importer, see @ref{Common Workflow for Rust Packaging} for more
-detailed steps on what to do before running the guix lockfile importer.
-@end quotation
-
-@example
-$ guix import --insert=gnu/packages/rust-crates.scm \
-      crate --lockfile=/path/to/Cargo.lock codeberg-cli
-@end example
-
-Now is the time we manually add back the snippets and remove the relevant TODOs
-we have already checked (if there are any).
-
-After running the lockfile importer and checking if there are any changes to
-manually add back, we can finally:
-
-@example
-$ git add gnu/packages/rust-crates.scm
-# Our target commit is the last one:
-$ git commit --amend --no-edit
-@end example
-
-We now have a non-conflicting tree, from which we can now update our PR with.
 
 @c *********************************************************************
 @node System Configuration
@@ -3274,8 +2933,8 @@ your Linode Summary section.) Now you can run the "install guix from
 
 @example
 sudo apt-get install gpg
-wget https://codeberg.org/efraim.gpg -qO - | gpg --import -
+wget https://sv.gnu.org/people/viewgpg.php?user_id=15145 -qO - | gpg --import -
-wget https://guix.gnu.org/guix-install.sh
+wget https://git.savannah.gnu.org/cgit/guix.git/plain/etc/guix-install.sh
 chmod +x guix-install.sh
 ./guix-install.sh
 guix pull
@@ -3454,7 +3113,7 @@ Now you can run the "install guix from @pxref{Binary Installation,,,
 guix, GNU Guix}" steps:
 
 @example
-wget https://guix.gnu.org/guix-install.sh
+wget https://git.savannah.gnu.org/cgit/guix.git/plain/etc/guix-install.sh
 chmod +x guix-install.sh
 ./guix-install.sh
 guix pull
@@ -4509,7 +4168,7 @@ network.  Assuming your interface is named @samp{enp2s0}, the following
 command can be used to do so:
 
 @example sh
-# nmcli con add type bridge-slave autoconnect yes ifname enp2s0 master br0
+# nmcli con add type bridge-slave ifname enp2s0 master br0
 @end example
 
 @quotation Important
@@ -4545,8 +4204,8 @@ bridge interface, as the default is to deny all.  Add the following to
 your list of services to do so:
 
 @example lisp
-(extra-special-file "/etc/qemu/bridge.conf"
+(extra-special-file "/etc/qemu/host.conf"
-                    (plain-file "bridge.conf" "allow br0\n"))
+                    (plain-file "host.conf" "allow br0\n"))
 @end example
 
 @subsection Invoking QEMU with the right command line options
@@ -4564,7 +4223,7 @@ machine making use of the bridge would cause networking issues.
 @example sh
 $ qemu-system-x86_64 [...] \
     -device virtio-net-pci,netdev=user0,mac=XX:XX:XX:XX:XX:XX \
-    -netdev bridge,helper=/run/privileged/bin/qemu-bridge-helper,id=user0,br=br0 \
+    -netdev bridge,id=user0,br=br0 \
     [...]
 @end example
 

doc/local.mk

@@ -6,7 +6,7 @@
 # Copyright © 2016, 2018 Mathieu Lirzin <mthl@gnu.org>
 # Copyright © 2018, 2021 Julien Lepiller <julien@lepiller.eu>
 # Copyright © 2019 Timothy Sample <samplet@ngyro.com>
-# Copyright © 2024, 2026 Janneke Nieuwenhuizen <janneke@gnu.org>
+# Copyright © 2024 Janneke Nieuwenhuizen <janneke@gnu.org>
 # Copyright © 2024 gemmaro <gemmaro.dev@gmail.com>
 #
 # This file is part of GNU Guix.
@@ -30,7 +30,7 @@ COOKBOOK_LANGUAGES = de es fr it ko pt_BR ru sk sv ta zh_CN
 
 # Arg1: A list of languages codes.
 # Arg2: The file name stem.
-lang_to_texinfo = $(foreach lang,$(1),$(srcdir)/%D%/$(2).$(lang).texi)
+lang_to_texinfo = $(foreach lang,$(1),%D%/$(2).$(lang).texi)
 
 # Automake does not understand GNU Make non-standard extensions,
 # unfortunately, so we cannot use the above patsubst-based function here.
@@ -104,7 +104,7 @@ MAINTAINERCLEANFILES  = $(OS_CONFIG_EXAMPLES_TEXI) $(TRANSLATED_INFO)
 # reference is not translated, which means it references a section that does not
 # exist.
 define xref_command
-$(top_builddir)/pre-inst-env $(GUILE) --no-auto-compile	\
+$(top_srcdir)/pre-inst-env $(GUILE) --no-auto-compile	\
   "$(top_srcdir)/build-aux/convert-xref.scm"		\
   $@.tmp $<
 endef
@@ -116,21 +116,21 @@ dummy_pot = $(shell mktemp --suffix=.pot)
 $(srcdir)/%D%/guix.%.texi: po/doc/guix-manual.%.po $(srcdir)/%D%/contributing.%.texi guix/build/po.go
 	-$(AM_V_PO4A)$(PO4A) --no-update			\
 	    --variable localized="$@.tmp"			\
-	    --variable master="$(srcdir)/%D%/guix.texi"		\
+	    --variable master="%D%/guix.texi"			\
 	    --variable po="$<"					\
 	    --variable pot=$(dummy_pot)			\
-	    $(srcdir)/po/doc/po4a.cfg
+	    po/doc/po4a.cfg
 	-sed -i "s|guix\.info|$$(basename "$@" | sed 's|texi$$|info|')|" "$@.tmp"
 	-$(AM_V_POXREF)LC_ALL=en_US.UTF-8 $(xref_command)
 	-mv "$@.tmp" "$@"
 
 $(srcdir)/%D%/guix-cookbook.%.texi: po/doc/guix-cookbook.%.po guix/build/po.go
-	-$(AM_V_PO4A)$(PO4A) --no-update				\
+	-$(AM_V_PO4A)$(PO4A) --no-update			\
-	    --variable localized="$@.tmp"				\
+	    --variable localized="$@.tmp"			\
-	    --variable master="$(srcdir)/%D%/guix-cookbook.texi"	\
+	    --variable master="%D%/guix-cookbook.texi"		\
-	    --variable po="$<"						\
+	    --variable po="$<"					\
 	    --variable pot=$(dummy_pot)			\
-	    $(srcdir)/po/doc/po4a.cfg
+	    po/doc/po4a.cfg
 	-sed -i "s|guix-cookbook\.info|$$(basename "$@" | sed 's|texi$$|info|')|" "$@.tmp"
 	-$(AM_V_POXREF)LC_ALL=en_US.UTF-8 $(xref_command)
 	-mv "$@.tmp" "$@"
@@ -138,16 +138,16 @@ $(srcdir)/%D%/guix-cookbook.%.texi: po/doc/guix-cookbook.%.po guix/build/po.go
 $(srcdir)/%D%/contributing.%.texi: po/doc/guix-manual.%.po guix/build/po.go
 	-$(AM_V_PO4A)$(PO4A) --no-update			\
 	    --variable localized="$@.tmp"			\
-	    --variable master="$(srcdir)/%D%/contributing.texi"		\
+	    --variable master="%D%/contributing.texi"		\
 	    --variable po="$<"					\
 	    --variable pot=$(dummy_pot)			\
-	    $(srcdir)/po/doc/po4a.cfg
+	    po/doc/po4a.cfg
 	-$(AM_V_POXREF)LC_ALL=en_US.UTF-8 $(xref_command)
 	-mv "$@.tmp" "$@"
 
 %D%/os-config-%.texi: gnu/system/examples/%.tmpl
 	$(AM_V_GEN)$(MKDIR_P) "`dirname $@`";	\
-	sed -e s,@,@@,g "$<" > "$@"
+	cp "$<" "$@"
 
 infoimagedir = $(infodir)/images
 dist_infoimage_DATA =				\

etc/git/commit-msg

@@ -1,4 +1,5 @@
 #!/bin/sh
+# From Gerrit Code Review 3.11.1.
 #
 # Part of Gerrit Code Review (https://www.gerritcodereview.com/)
 #
@@ -69,9 +70,9 @@ dest="$1.tmp.${random}"
 
 trap 'rm -f "$dest" "$dest-2"' EXIT
 
-if ! sed -e '/>8/q' "$1" | git stripspace --strip-comments > "${dest}" ; then
+if ! cat "$1" | sed -e '/>8/q' | git stripspace --strip-comments > "${dest}" ; then
-  echo "cannot strip comments from $1"
+   echo "cannot strip comments from $1"
-  exit 1
+   exit 1
 fi
 
 if test ! -s "${dest}" ; then
@@ -90,7 +91,7 @@ else
   pattern=".*"
 fi
 
-if git interpret-trailers --no-divider --parse < "$1" | grep -q "^$token: $pattern$" ; then
+if git interpret-trailers --parse < "$1" | grep -q "^$token: $pattern$" ; then
   exit 0
 fi
 
@@ -98,7 +99,6 @@ fi
 # sentinel at the end to make sure there is one.
 # Avoid the --in-place option which only appeared in Git 2.8
 if ! git interpret-trailers \
-         --no-divider \
          --trailer "Signed-off-by: SENTINEL" < "$1" > "$dest-2" ; then
   echo "cannot insert Signed-off-by sentinel line in $1"
   exit 1
@@ -110,7 +110,6 @@ fi
 # Avoid the --in-place option which only appeared in Git 2.8
 # Avoid the --where option which only appeared in Git 2.15
 if ! git -c trailer.where=before interpret-trailers \
-         --no-divider \
          --trailer "Signed-off-by: $token: $value" < "$dest-2" |
      sed -e "s/^Signed-off-by: \($token: \)/\1/" \
          -e "/^Signed-off-by: SENTINEL/d" > "$dest" ; then

etc/manifests/cross-compile.scm

@@ -1,6 +1,6 @@
 ;;; GNU Guix --- Functional package management for GNU
 ;;; Copyright © 2020-2022, 2024 Ludovic Courtès <ludo@gnu.org>
-;;; Copyright © 2020, 2026 Janneke Nieuwenhuizen <janneke@gnu.org>
+;;; Copyright © 2020 Jan (janneke) Nieuwenhuizen <janneke@gnu.org>
 ;;; Copyright © 2023 Andreas Enge <andreas@enge.fr>
 ;;; Copyright © 2025 Efraim Flashner <efraim@flashner.co.il>
 ;;;
@@ -61,7 +61,7 @@ TARGET."
   ;; from the other package sets.
   (fold delete %base-packages
         (append (map specification->package
-                     '("kbd" "iproute2" "iw" "wireless-tools"))
+                     '("e2fsprogs" "kbd" "iproute2" "iw" "wireless-tools"))
                 %base-packages-linux)))
 
 (define %system-packages

etc/teams.scm

@@ -16,7 +16,6 @@ exec $pre_inst_env_maybe guix repl -- "$0" "$@"
 ;;; Copyright © 2025 Cayetano Santos <csantosb@inventati.org>
 ;;; Copyright © 2025-2026 Ludovic Courtès <ludo@gnu.org>
 ;;; Copyright © 2025 jgart <jgart@dismail.de>
-;;; Copyright © 2026 Denis 'GNUtoo' Carikli <GNUtoo@cyberdimension.org>
 ;;;
 ;;; This file is part of GNU Guix.
 ;;;
@@ -514,7 +513,6 @@ of Rebar and Mix build systems and Hex.pm importer."
                       "gnu/packages/autogen.scm"
                       "gnu/packages/autotools.scm"
                       "gnu/packages/bison.scm"
-                      "gnu/packages/compiler-tools.scm"
                       "gnu/packages/m4.scm"
                       "gnu/packages/oyacc.scm"
                       "gnu/packages/re2c.scm")))
@@ -662,12 +660,6 @@ challenges"))
                       "gnu/system/examples/lightweight-desktop.tmpl"
                       "gnu/system/examples/desktop.tmpl")))
 
-(define-team dotnet
-  (team 'dotnet
-        #:name ".NET"
-        #:description ".NET programming environment."
-        #:scope (list "gnu/packages/dotnet.scm")))
-
 (define-team electronics
   (team 'electronics
         #:name "Electronics team"
@@ -698,7 +690,6 @@ ecosystem."
   (team 'embedded
         #:name "Embedded"
         #:scope (list "gnu/packages/bootloaders.scm"
-                      "gnu/packages/coreboot.scm"
                       "gnu/packages/firmware.scm")))
 
 (define-team games
@@ -835,7 +826,6 @@ and the maven-build-system."
               (make-regexp* "^gnu/packages/java(-.+|)\\.scm$")
               ;; Match maven.scm and maven-*.scm
               (make-regexp* "^gnu/packages/maven(-.+|)\\.scm$")
-              "gnu/packages/netbeans.scm"
               "guix/build/ant-build-system.scm"
               "guix/build/clojure-build-system.scm"
               "guix/build/clojure-utils.scm"
@@ -852,8 +842,7 @@ and the maven-build-system."
         #:name "JavaScript team"
         #:description
         "JavaScript/Node.js packages, the node build system."
-        #:scope (list "gnu/packages/javascript.scm"
+        #:scope (list "gnu/packages/node-xyz.scm"
-                      "gnu/packages/node-xyz.scm"
                       "gnu/packages/node.scm"
                       "guix/build-system/node.scm"
                       "guix/build/node-build-system.scm"
@@ -876,8 +865,8 @@ and the maven-build-system."
         "The plasma desktop environment, and KDE Applications."
         #:scope (list (make-regexp* "^gnu/packages/(kde)(-.+|)\\.scm$"))))
 
-(define-team linux-libre
+(define-team kernel
-  (team 'linux-libre
+  (team 'kernel
         #:name "Linux-libre kernel team"
         #:scope (list "gnu/build/linux-modules.scm"
                       (make-regexp* "^gnu/packages/aux-files/linux-libre.*$")
@@ -954,7 +943,6 @@ importer, and the ocaml-build-system."
         #:scope
         (list "gnu/packages/ocaml.scm"
               "gnu/packages/coq.scm"
-              "gnu/packages/rocq.scm"
               "guix/build/ocaml-build-system.scm"
               "guix/build/dune-build-system.scm"
               "guix/build-system/ocaml.scm"
@@ -984,8 +972,7 @@ perl-build-system as well as the rakudo-build-system."
         #:description
         "Python, Python packages, the \"pypi\" importer, and the python-build-system."
         #:scope
-        (list (make-regexp* "^gnu/packages/aux-files/python/.*\\.py$")
+        (list "gnu/packages/django.scm"
-              "gnu/packages/django.scm"
               "gnu/packages/jupyter.scm"
               (make-regexp* "^gnu/packages/python(-.+|)\\.scm$")
               "gnu/packages/sphinx.scm"
@@ -1249,11 +1236,6 @@ the \"texlive\" importer."
                       "guix/build-system/zig.scm")))
 
 
-(define-member (person "Anderson Torres"
-                       "anderson.torres.8519@gmail.com"
-                       "AndersonTorres")
-  community translations)
-
 (define-member (person "Eric Bavier"
                        "bavier@posteo.net"
                        "bavier")
@@ -1264,11 +1246,6 @@ the \"texlive\" importer."
                        "jonsger")
   mozilla)
 
-(define-member (person "Denis Carikli"
-                       "GNUtoo@cyberdimension.org"
-                       "GNUtoo")
-  embedded)
-
 (define-member (person "Ludovic Courtès"
                        "ludo@gnu.org"
                        "civodul")
@@ -1298,7 +1275,7 @@ the \"texlive\" importer."
 (define-member (person "Leo Famulari"
                        "leo@famulari.name"
                        "lfam")
-  linux-libre)
+  kernel)
 
 (define-member (person "Efraim Flashner"
                        "efraim@flashner.co.il"
@@ -1383,7 +1360,7 @@ the \"texlive\" importer."
 (define-member (person "Vagrant Cascadian"
                        "vagrant@debian.org"
                        "vagrantc")
-  debian embedded linux-libre)
+  debian embedded kernel)
 
 (define-member (person "Vagrant Cascadian"        ;XXX: duplicate
                        "vagrant@reproducible-builds.org"
@@ -1537,7 +1514,7 @@ the \"texlive\" importer."
 (define-member (person "Rodion Goritskov"
                        "rodion@goritskov.com"
                        "rodion-goritskov")
-  games java kde linux-libre release)
+  games java kde kernel release)
 
 (define-member (person "Jason Conroy"
                        "jconroy@tscripta.net"
@@ -1557,7 +1534,7 @@ the \"texlive\" importer."
 (define-member (person "Danny Milosavljevic"
                        "dannym@friendly-machines.com"
                        "daym")
-  bootstrap dotnet hpc python rust science)
+  bootstrap hpc python rust science)
 
 (define-member (person "Andy Tai"
                        "atai@atai.org"
@@ -1577,7 +1554,7 @@ the \"texlive\" importer."
 (define-member (person "Nguyễn Gia Phong"
                        "cnx@loang.net"
                        "cnx")
-  build-tools lua qa-packages sysadmin vcs)
+  build-tools python qa-packages sysadmin vcs)
 
 (define-member (person "Lilah Tascheter"
                        "lilah@lunabee.space"
@@ -1622,7 +1599,7 @@ the \"texlive\" importer."
 (define-member (person "Wilko Meyer"
                        "w@wmeyer.eu"
                        "theesm")
-  linux-libre perl)
+  kernel perl)
 
 (define-member (person "Untrusem"
                        "mysticmoksh@riseup.net"
@@ -1652,7 +1629,7 @@ the \"texlive\" importer."
 (define-member (person "Thanos Apollo"
                        "public@thanosapollo.org"
                        "thanosapollo")
-  vcs emacs)
+  vcs)
 
 (define-member (person "Ashish SHUKLA"
                        "ashish.is@lostca.se"
@@ -1674,26 +1651,6 @@ the \"texlive\" importer."
                        "tok")
   electronics)
 
-(define-member (person "gemmaro"
-                       "gemmaro.dev@gmail.com"
-                       "gemmaro")
-  ruby)
-
-(define-member (person "bdunahu"
-                       "bdunahu@operationnull.com"
-                       "bdunahu")
-  games)
-
-(define-member (person "Nomike"
-                       "nomike@nomike.com"
-                       "nomike")
-  dotnet)
-
-(define-member (person "Fabio Natali"
-                       "me@fabionatali.com"
-                       "fnat")
-  emacs)
-
 
 (define (find-team name)
   (or (hash-ref %teams (string->symbol name))

etc/teams/rust/audit-rust-crates

@@ -1,6 +1,6 @@
 #!/usr/bin/env -S gawk -f
 # GNU Guix --- Functional package management for GNU
-# Copyright © 2025, 2026 Efraim Flashner <efraim@flashner.co.il>
+# Copyright © 2025 Efraim Flashner <efraim@flashner.co.il>
 #
 # This file is part of GNU Guix.
 #
@@ -21,22 +21,20 @@
 # ./etc/teams/rust/audit-rust-crates ./path/to/file.scm
 # Prints the output of cargo-audit to the shell.
 
+# Make sure we have cargo-audit in our PATH
 BEGIN {
-    "which cargo-audit" | getline cargoAudit
+    if (system("which cargo-audit 1> /dev/null"))
-    close("which cargo-audit")
+        exit 1;
-    cargoAudit = cargoAudit " audit --file -"
-
     # Parse a record at a time.
     RS = "\n\n"
+    cargoAudit = "cargo-audit audit --file -"
 }
 
-# Check the crate-source origin-only inputs, like in rust-crates.scm
+# Check the crate-source origin-only inputs
 /crate-source/ {
     for(i=3; i <= NF-2; i++) {
         if($i == "(crate-source") {
-            crateName = $(i+1)
+            cargoLock = cargoLock "[[package]]\nname = " $(i+1) "\nversion = " $(i+2) "\n"
-            crateVersion = $(i+2)
-            cargoLock = cargoLock "[[package]]\nname = " crateName "\nversion = " crateVersion "\n"
             next
         }
     }
@@ -46,64 +44,27 @@ BEGIN {
 /crate-uri/ {
     for(i=3; i <= NF; i++) {
         if($i == "(version")
-            crateVersion = $(i+1)
+           crateVersion = $(i+1)
         if($i == "(crate-uri")
-            crateName = $(i+1)
+           crateName = $(i+1)
     }
     gsub(/)/, "", crateVersion)
     cargoLock = cargoLock "[[package]]\nname = " crateName "\nversion = " crateVersion "\n"
-    next
 }
 
-# Parse the crates created from packages using 'cargo package'
+# The xxxx-cargo-input variables have a set style
-/package:rust/ {
+# TODO: Replace the last dash between the name and the version with a space!
-    pkg = $2
+# This doesn't take into account swapping between "-" and "_" so we skip it.
-    split(pkg, name_version, "-")
+#( $2 ~ /-cargo-inputs/ ) {
-    crateVersion = name_version[length(name_version)]
+#    sub(/-cargo-inputs/, "", $2)
-    crateName = substr(pkg, 6, (length(pkg) - length(crateVersion) - 6))
+#    gsub(/)/, "", $0)
-    split(crateVersion, versionDots, ".")
+#    gsub(/rust-/, "", $0)
-    if(crateVersion && (crateVersion != "(git-version") && (length(versionDots) == 3) && crateName) {
+#    #gensub(/([[:alpha:]])-([[:digit:]]+)/, "\\1 \\2", "g", $i)
-        cargoLock = cargoLock "[[package]]\nname = \"" crateName "\"\nversion = \"" crateVersion "\"\n"
+#    print "[[package]]\nname = \"" $2 "\"\nversion = \"1.0.0\"\ndependencies = ["
-    } else {
+#    for (i = 4; i <= NF; i++) {
-        untested++
+#        print "\"" $i "\","
-        #print("Unable to test " $0)
+#    }
-    }
+#    print "]"
-    next
+#}
-}
 
-# We make an attempt to create the crate name from the package name otherwise
+END { print cargoLock | cargoAudit }
-/git-reference/ {
-    for(i=3; i <= NF; i++) {
-        if($i == "(version")
-            crateVersion = $(i+1)
-        if($i == "(name")
-            crateName = $(i+1)
-        if($i == "(git-file-name") {
-            crateName = $(i+1)
-            crateVersion = $(i+2)
-        }
-    }
-    gsub(/)/, "", crateVersion)
-    gsub(/)/, "", crateName)
-    sub(/rust-/, "", crateName)
-    # The crate version MUST be major.minor.patch
-    split(crateVersion, versionParts, ".")
-    if(crateVersion && (crateVersion != "(git-version") && (length(versionParts) == 3) && crateName) {
-        cargoLock = cargoLock "[[package]]\nname = " crateName "\nversion = " crateVersion "\n"
-    } else {
-        untested++
-        #print("Unable to test " $0)
-    }
-    next
-}
-
-# Note those which we were unable to parse
-/define rust/ {
-    if($3 == "#f)")
-        next
-    print("Unable to parse " $0)
-    }
-
-{ untested++ }
-
-END { print("Number of crates untested: " untested); print cargoLock | cargoAudit }

gnu/bootloader/grub.scm

@@ -446,11 +446,9 @@ when booting a root file system on a Btrfs subvolume."
                (modules (menu-entry-multiboot-modules entry)))
           #~(format port "
 menuentry ~s {
-  ~a
   multiboot ~a root=~a~a~a
 }~%"
                     #$label
-                    #$(grub-root-search device kernel)
                     #$kernel
                     #$(device-name->hurd-device-name device-name #:disk disk)
                     (string-join (list #$@arguments) " " 'prefix)

gnu/build/file-systems.scm

@@ -1226,12 +1226,10 @@ file name or an nfs-root containing ':/')."
 
   (match spec
     ((? string?)
-     (if (string-match "^/dev/[a-zA-Z0-9]+$" spec)
+     (if (string-prefix? "/dev/" spec)
          ;; Nothing to do, but wait until SPEC shows up.
          (resolve device-exists? spec identity)
-         ;; Do not resolve NFS / CIFS / tmpfs devices
+         spec)) ; do not resolve NFS / CIFS / tmpfs devices
-         ;; or bcachefs multi-device specifications.
-         spec))
     ((? file-system-label?)
      ;; Resolve the label.
      (resolve find-partition-by-label

gnu/build/hurd-boot.scm

@@ -74,37 +74,16 @@ Return the value associated with OPTION, or #f on failure."
                 (loop (absolute target) (+ depth 1))
                 file))))))
 
-(define* (make-hurd-device-nodes #:key (root "/") (hurd "/hurd"))
+(define* (make-hurd-device-nodes #:optional (root "/"))
   "Make some of the nodes needed on GNU/Hurd."
   (define (scope dir)
-    (in-vicinity root dir))
+    (string-append root (if (string-suffix? "/" root) "" "/") dir))
-
-  (define scope-set-translator
-    (match-lambda
-      ((file-name command)
-       (scope-set-translator (list file-name command #o600)))
-      ((file-name command mode)
-       (let ((mount-point (scope file-name)))
-         (set-translator mount-point command mode)))))
 
   (mkdir-p (scope "dev"))
-  ;; XXX: We must have `/dev/console` otherwise `console-run` tries to
+  ;; Don't create /dev/null etc just yet; the store
-  ;; create it while the file-system is still read-only.
+  ;; messes-up the permission bits.
-  (for-each (lambda (file)
+  ;; Don't create /dev/console, /dev/vcs, etc.: they are created by
-              (call-with-output-file (scope file)
+  ;; console-run on first boot.
-                (lambda (port)
-                  (display file port)   ;avoid hard-linking
-                  (chmod port #o666))))
-            '("dev/console"
-              ;; XXX What about vcs?
-              ;; Don't create /dev/null etc just yet; the store
-              ;; messes-up the permission bits.
-              ;; "dev/null"
-              ;; "dev/zero"
-              ;; "dev/full"
-              ;; "dev/random"
-              ;; "dev/urandom"
-              ))
 
   (mkdir-p (scope "servers"))
   (for-each (lambda (file)
@@ -122,47 +101,22 @@ Return the value associated with OPTION, or #f on failure."
               "suspend"))
 
   (mkdir-p (scope "servers/socket"))
-  (mkdir-p (scope "servers/bus/pci"))
 
-  ;; Set the 'gnu.translator' extended attribute for passive translator
+  ;; Don't create /servers/socket/1 & co: runsystem does that on first boot.
-  ;; settings for pipes (servers/socet/1) and mount information (proc/mounts).
-  ;; Pipes are needed for guile-3.0.11 to startup, this enables moving
-  ;; "runsystem" to guile.
-  ;; XXX TODO: Set more passive xattr translators?
-  (define servers
-    `(
-      ;; ("servers/bus/pci"         ("/hurd/pci-arbiter"))
-      ;; ("servers/crash-dump-core" ("/hurd/crash" "--dump-core"))
-      ;; ("servers/crash-kill"      ("/hurd/crash" "--kill"))
-      ;; ("servers/crash-suspend"   ("/hurd/crash" "--suspend"))
-      ;; ("servers/password"        ("/hurd/password"))
-      ;; PIPE -- for running runsystem as Guile
-      ("servers/socket/1"        (,(in-vicinity hurd "pflocal")))
-      ;; /servers/socket/2 and /26 are created by 'static-networking-service'.
-      ;; XXX: Spawn pfinet without arguments on these nodes so that a DHCP
-      ;; client has someone to talk to?
-      ("proc"                    (,(in-vicinity hurd "procfs") "--stat-mode=444"))))
 
-  (for-each scope-set-translator servers)
+  ;; TODO: Set the 'gnu.translator' extended attribute for passive translator
-
+  ;; settings?
-  (define devices
+  (mkdir-p (scope "servers/bus/pci")))
-    '())
-  (for-each scope-set-translator devices))
 
 (define (passive-translator-xattr? file-name)
   "Return true if FILE-NAME has an extended @code{gnu.translator} attribute
-set.
+set."
-
+  (catch 'system-error
-Note that reading \"gnu.*\" xattrs on Linux only work with ext4; for tmpfs,
+    (lambda _ (not (string-null? (getxattr file-name "gnu.translator"))))
-used during image creation, linux-7.0 with linux-shmem-hurd-xattr patch is
+    (lambda args
-needed."
+      (if (= ENODATA (system-error-errno args))
-  (and (file-exists? file-name)
+          #f
-       (catch 'system-error
+          (apply throw args)))))
-         (lambda _ (not (string-null? (getxattr file-name "gnu.translator"))))
-         (lambda args
-           (if (= ENODATA (system-error-errno args))
-               #f
-               (apply throw args))))))
 
 (define (passive-translator-installed? file-name)
   "Return true if @file{showtrans} finds a translator installed on FILE-NAME."
@@ -182,11 +136,7 @@ needed."
       (passive-translator-installed? file-name)))
 
 (define* (set-translator file-name command #:optional (mode #o600))
-  "Setup translator COMMAND on FILE-NAME.
+  "Setup translator COMMAND on FILE-NAME."
-
-Note that setting \"gnu.*\" xattrs on Linux only work with ext4; for tmpfs,
-used during image creation, linux-7.0 with linux-shmem-hurd-xattr patch is
-needed."
   (unless (translated? file-name)
     (let ((dir (dirname file-name)))
       (unless (directory-exists? dir)
@@ -218,7 +168,7 @@ needed."
   "Make some of the device nodes needed on GNU/Hurd."
 
   (define (scope dir)
-    (in-vicinity root dir))
+    (string-append root (if (string-suffix? "/" root) "" "/") dir))
 
   (define scope-set-translator
     (match-lambda
@@ -230,19 +180,8 @@ needed."
 
   (define (mkdir* dir)
     (let ((dir (scope dir)))
-      (unless (file-exists? dir)
+     (unless (file-exists? dir)
-        (mkdir-p dir))))
+       (mkdir-p dir))))
-
-  ;; (define random-seed "/var/lib/random-seed")
-
-  ;; ;; Create seed file to avoid
-  ;; ;; /gnu/store/...-hurd-x.y.z/hurd/random: Warning: Failed to read random seed file /var/lib/random-seed: No such file or directory
-  ;; (let ((file (scope random-seed)))
-  ;;   (mkdir-p (dirname file))
-  ;;   (call-with-output-file file
-  ;;     (lambda (port)
-  ;;       (display (iota 1000) port)
-  ;;       (chmod port #o600))))
 
   (define servers
     '(("servers/bus/pci"         ("/hurd/pci-arbiter"))
@@ -259,14 +198,8 @@ needed."
   (define devices
     `(("dev/full"    ("/hurd/null"     "--full")            #o666)
       ("dev/null"    ("/hurd/null")                         #o666)
-      ;; The random translators, especially /dev/urandom, need to be non-passive
+      ("dev/random"  ("/hurd/random"   "--seed-file" "/var/lib/random-seed")
-      ;; When they exist in the file-system and reference /var/lib/random-seed
+                                                            #o644)
-      ;; while / is read-only. console-run will hang.
-      ;; ("dev/random"  ("/hurd/random"   "--seed-file" ,random-seed)
-      ;;                                                       #o644)
-      ;; ("dev/urandom"  ("/hurd/random"   "--seed-file" ,random-seed
-      ;;                 "--fast")
-      ;;  #o644)
       ("dev/zero"    ("/hurd/storeio"  "--store-type=zero") #o666)
 
       ("dev/console" ("/hurd/term"     "/dev/console" "device" "console"))
@@ -351,6 +284,7 @@ needed."
     (rename-file (scope "dev/console") (scope "dev/console-")))
   (for-each scope-set-translator devices)
 
+  (false-if-EEXIST (symlink "/dev/random" (scope "dev/urandom")))
   (false-if-EEXIST (symlink "/dev/fd/0" (scope "dev/stdin")))
   (false-if-EEXIST (symlink "/dev/fd/1" (scope "dev/stdout")))
   (false-if-EEXIST (symlink "/dev/fd/2" (scope "dev/stderr")))

gnu/build/image.scm

@@ -322,7 +322,7 @@ register-closure."
 
   ;; Populate /dev.
   (when make-device-nodes
-    (make-device-nodes #:root root))
+    (make-device-nodes root))
 
   (when register-closures?
     (unless copy-closures?

gnu/build/linux-container.scm

@@ -445,14 +445,10 @@ load path must be adjusted as needed."
           ;; Behave like an init process: create a sub-process that calls
           ;; THUNK, and wait for child processes.  Furthermore, forward
           ;; RELAYED-SIGNALS to the child process.
-          ;; We presently use `safe-clone` here due to a bug in the interaction
+          (match (primitive-fork)
-          ;; between Guix and `primitive-fork` in Guile 3.0.11:
+            (0
-          ;; https://codeberg.org/guix/guix/issues/7690#issuecomment-12744123
-          (safe-clone
-            SIGCHLD
-            (lambda ()
              (call-with-clean-exit thunk))
-            (lambda (pid)
+            (pid
              (install-signal-handlers pid)
              (let loop ()
                (match (wait-child-process)

gnu/ci.scm

@@ -173,16 +173,7 @@ SYSTEM."
 (define (core-packages system)
   "Return the 'core' package set suitable for SYSTEM, which might be a system
 type or a GNU triplet."
-  (cond ((target-linux? system)
+  (cond ((target-linux? system) (append %core-packages %linux-packages))
-         (append %core-packages
-                 %linux-packages
-                 (cond ((target-arm32? system)
-                        (list linux-libre-arm-generic))
-                       ((target-aarch64? system)
-                        (list linux-libre-arm64-generic))
-                       ((target-riscv64? system)
-                        (list linux-libre-riscv64-generic))
-                       (else '()))))
         ((target-hurd? system) (append %core-packages %hurd-packages))
         ((target-mingw? system) %core-packages-for-mingw)
         (else '())))

gnu/home/services/ssh.scm

@@ -70,11 +70,6 @@
             openssh-host-proxy-command
             openssh-host-host-key-algorithms
             openssh-host-accepted-key-types
-            openssh-host-control-master
-            openssh-host-control-file-name
-            openssh-host-control-persist
-            openssh-host-sent-environment-variables
-            openssh-host-environment-variables
             openssh-host-extra-content
             proxy-jump
             proxy-jump-host-name
@@ -89,9 +84,6 @@
 (define (serialize-field-name name)
   (match name
     ('accepted-key-types "PubkeyAcceptedKeyTypes")
-    ('sent-environment-variables "SendEnv")
-    ('environment-variables "SetEnv")
-    ('control-file-name "ControlPath")
     (_
      (let ((name (let ((str (symbol->string name)))
                    (if (string-suffix? "?" str)
@@ -138,14 +130,6 @@
 (define-maybe string)
 (define-maybe natural-number)
 
-(define (serialize-symbol field value)
-  (if (maybe-value-set? value)
-      (string-append "  " (serialize-field-name field) " "
-                     (symbol->string value) "\n")
-      ""))
-
-(define-maybe symbol)
-
 (define (serialize-raw-configuration-string field value)
   (string-append value "\n"))
 (define raw-configuration-string? string?)
@@ -158,33 +142,6 @@
 
 (define-maybe string-list)
 
-(define (env-list? lst)
-  (string-list? lst))
-
-(define (serialize-env-list field lst)
-  (string-append "  " (serialize-field-name field) " "
-                 (string-join lst " ") "\n"))
-
-(define-maybe env-list)
-
-(define (string-alist? lst)
-  (and (list? lst)
-       (every (lambda (x)
-                (and (pair? x)
-                     (string? (car x))
-                     (string? (cdr x))))
-              lst)))
-
-(define (serialize-string-alist field lst)
-  (string-append "  " (serialize-field-name field) " "
-                 (string-join
-                  (map (match-lambda
-                         ((key . value)
-                          (format #nil "~s" (string-append key "=" value))))
-                       lst) " ") "\n"))
-
-(define-maybe string-alist)
-
 (define-record-type <proxy-command>
   (proxy-command command)
   proxy-command?
@@ -318,31 +275,6 @@ through before connecting to the server.")
   (accepted-key-types
    maybe-string-list
    "The list of accepted user public key types.")
-  (control-master
-   maybe-symbol
-   "Enables the sharing of multiple sessions over a single network connection.
-Acceptable values are @code{'no}, @code{'yes}, @code{'auto}, @code{'ask}, and
-@code{'autoask}.")
-  (control-file-name
-   maybe-string
-   "The file name of the control socket used for connection sharing, or
-@code{\"none\"} to disable connection sharing.")
-  (control-persist
-   maybe-string
-   "When used in conjunction with @env{control-master}, specifies that the
-master connection should remain open in the background (waiting for future
-client connections) after the initial client connection has been closed.")
-  (sent-environment-variables
-   maybe-env-list
-   "Specifies which variables from the local environment should be sent to the
-server.  The server must also support it, and the server must be configured to
-accept those environment variables.")
-  (environment-variables
-   maybe-string-alist
-   "List of environment variables with corresponding values to send to the
-server, as an alist of strings of the form @code{'(\"@var{variable}\"
-. \"@var{value}\")}.  The server must also support it, and the server must be
-configured to accept those environment variables.")
   (extra-content
    (raw-configuration-string "")
    "Extra content appended as-is to this @code{Host} block in

gnu/local.mk

@@ -57,7 +57,7 @@
 # Copyright © 2022 ( <paren@disroot.org>
 # Copyright © 2022, 2026 jgart <jgart@dismail.de>
 # Copyright © 2022-2023, 2025-2026 Denis 'GNUtoo' Carikli <GNUtoo@cyberdimension.org>
-# Copyright © 2023-2026 Zheng Junjie <z572@z572.online>
+# Copyright © 2023-2025 Zheng Junjie <z572@z572.online>
 # Copyright © 2023 Ivana Drazovic <iv.dra@hotmail.com>
 # Copyright © 2023 Andy Tai <atai@atai.org>
 # Copyright © 2023 B. Wilson <elaexuotee@wilsonb.com>
@@ -76,7 +76,6 @@
 # Copyright © 2025 Nigko Yerden <nigko.yerden@gmail.com>
 # Copyright © 2025 Cayetano Santos <csantosb@inventati.org>
 # Copyright © 2025 bdunahu <bdunahu@operationnull.com>
-# Copyright © 2026 Simen Endsjø <contact@simendsjo.me>
 #
 # This file is part of GNU Guix.
 #
@@ -209,7 +208,6 @@ GNU_SYSTEM_MODULES =				\
   %D%/packages/cobol.scm			\
   %D%/packages/code.scm				\
   %D%/packages/commencement.scm			\
-  %D%/packages/compiler-tools.scm		\
   %D%/packages/compression.scm			\
   %D%/packages/compton.scm 			\
   %D%/packages/computer-architecture.scm	\
@@ -236,7 +234,6 @@ GNU_SYSTEM_MODULES =				\
   %D%/packages/darwin.scm			\
   %D%/packages/data-language.scm		\
   %D%/packages/databases.scm			\
-  %D%/packages/datalog.scm			\
   %D%/packages/datamash.scm			\
   %D%/packages/datastructures.scm		\
   %D%/packages/dav.scm				\
@@ -344,7 +341,6 @@ GNU_SYSTEM_MODULES =				\
   %D%/packages/golang-check.scm		\
   %D%/packages/golang-compression.scm		\
   %D%/packages/golang-crypto.scm	      	\
-  %D%/packages/golang-graphics.scm	\
   %D%/packages/golang-maths.scm		\
   %D%/packages/golang-vcs.scm	        	\
   %D%/packages/golang-web.scm	        	\
@@ -506,7 +502,6 @@ GNU_SYSTEM_MODULES =				\
   %D%/packages/myrddin.scm			\
   %D%/packages/ncdu.scm				\
   %D%/packages/ncurses.scm			\
-  %D%/packages/netbeans.scm			\
   %D%/packages/netpbm.scm			\
   %D%/packages/nettle.scm			\
   %D%/packages/networking.scm			\
@@ -615,7 +610,6 @@ GNU_SYSTEM_MODULES =				\
   %D%/packages/rocm-apps.scm			\
   %D%/packages/rocm-libs.scm			\
   %D%/packages/rocm-tools.scm			\
-  %D%/packages/rocq.scm				\
   %D%/packages/rpc.scm				\
   %D%/packages/rpm.scm				\
   %D%/packages/rrdtool.scm			\
@@ -733,6 +727,7 @@ GNU_SYSTEM_MODULES =				\
   %D%/packages/zig.scm				\
   %D%/packages/zig-xyz.scm			\
   %D%/packages/zile.scm				\
+  %D%/packages/zwave.scm			\
 						\
   %D%/services.scm				\
   %D%/services/admin.scm			\
@@ -759,7 +754,6 @@ GNU_SYSTEM_MODULES =				\
   %D%/services/docker.scm			\
   %D%/services/authentication.scm		\
   %D%/services/file-sharing.scm			\
-  %D%/services/firmware.scm			\
   %D%/services/games.scm			\
   %D%/services/ganeti.scm			\
   %D%/services/getmail.scm				\
@@ -1004,9 +998,7 @@ dist_patch_DATA =						\
   %D%/packages/patches/akonadi-not-relocatable.patch		\
   %D%/packages/patches/akonadi-timestamps.patch		\
   %D%/packages/patches/alure-dumb-2.patch			\
-  %D%/packages/patches/amd-smi-newer-libdrm.patch		\
   %D%/packages/patches/amd-smi-python.patch			\
-  %D%/packages/patches/angband-remove-nonfree-tile-options.patch	\
   %D%/packages/patches/ibus-anthy-fix-tests.patch		\
   %D%/packages/patches/ibus-table-paths.patch			\
   %D%/packages/patches/antiword-CVE-2014-8123.patch			\
@@ -1023,7 +1015,6 @@ dist_patch_DATA =						\
   %D%/packages/patches/ath9k-htc-firmware-gcc.patch		\
   %D%/packages/patches/ath9k-htc-firmware-gcc-compat.patch	\
   %D%/packages/patches/atlas-gfortran-compat.patch		\
-  %D%/packages/patches/aubio-waflib-python312-compat.patch	\
   %D%/packages/patches/audacity-ffmpeg-fallback.patch		\
   %D%/packages/patches/audiofile-fix-datatypes-in-tests.patch	\
   %D%/packages/patches/audiofile-fix-sign-conversion.patch	\
@@ -1101,11 +1092,11 @@ dist_patch_DATA =						\
   %D%/packages/patches/catdoc-CVE-2017-11110.patch		\
   %D%/packages/patches/chez-irregex-import-cond-expand.patch	\
   %D%/packages/patches/chez-scheme-bin-sh.patch			\
-  %D%/packages/patches/cianna-remove-error-for-missing-cuda.patch		\
   %D%/packages/patches/circos-remove-findbin.patch		\
   %D%/packages/patches/cdparanoia-fpic.patch			\
   %D%/packages/patches/cdrkit-libre-cross-compile.patch	\
   %D%/packages/patches/cdrtools-3.01-mkisofs-isoinfo.patch 	\
+  %D%/packages/patches/ceph-fix-cmake.patch                     \
   %D%/packages/patches/cf-tool-add-languages.patch		\
   %D%/packages/patches/chmlib-inttypes.patch			\
   %D%/packages/patches/cl-ana-pr-49.patch			\
@@ -1138,8 +1129,10 @@ dist_patch_DATA =						\
   %D%/packages/patches/clog-fix-shared-build.patch		\
   %D%/packages/patches/clucene-gcc-14.patch			\
   %D%/packages/patches/clucene-pkgconfig.patch			\
-  %D%/packages/patches/codex-acp-0.11.1-disable-code-mode.patch \
+  %D%/packages/patches/coda-use-system-libs.patch		\
-  %D%/packages/patches/codex-acp-0.11.1-remove-patch-sections.patch \
+  %D%/packages/patches/codex-acp-0.9.2-remove-patch-sections.patch \
+  %D%/packages/patches/codex-acp-0.9.2-replace-result-flatten.patch    \
+  %D%/packages/patches/codex-0.98.0-remove-patch-sections.patch    \
   %D%/packages/patches/cogl-fix-double-free.patch		\
   %D%/packages/patches/collada-dom-boost.patch			\
   %D%/packages/patches/collectd-5.11.0-noinstallvar.patch	\
@@ -1171,6 +1164,7 @@ dist_patch_DATA =						\
   %D%/packages/patches/cryfs-boost-1.89-fix.patch		\
   %D%/packages/patches/csvkit-set-locale-for-tests.patch			\
   %D%/packages/patches/ctranslate2-local-build.patch		\
+  %D%/packages/patches/ctune-cmake-disable-git-clone.patch		\
   %D%/packages/patches/cube-nocheck.patch			\
   %D%/packages/patches/cups-relax-root-ownership-check.patch		\
   %D%/packages/patches/cura-engine-gcc-14.patch			\
@@ -1181,6 +1175,7 @@ dist_patch_DATA =						\
   %D%/packages/patches/curlftpfs-fix-memory-leak.patch		\
   %D%/packages/patches/curlftpfs-fix-no_verify_hostname.patch	\
   %D%/packages/patches/cursynth-wave-rand.patch			\
+  %D%/packages/patches/cvc5-reproducible-build.patch		\
   %D%/packages/patches/cvs-CVE-2017-12836.patch		\
   %D%/packages/patches/cyrus-sasl-fix-time-h.patch              \
   %D%/packages/patches/d-feet-drop-unused-meson-argument.patch	\
@@ -1190,7 +1185,6 @@ dist_patch_DATA =						\
   %D%/packages/patches/date-output-pkg-config-files.patch	\
   %D%/packages/patches/dbacl-include-locale.h.patch		\
   %D%/packages/patches/dbacl-icheck-multiple-definitions.patch	\
-  %D%/packages/patches/dblatex-importlib.patch		\
   %D%/packages/patches/dblatex-inkscape-1.0.patch		\
   %D%/packages/patches/dbus-helper-search-path.patch		\
   %D%/packages/patches/ddd-build.patch				\
@@ -1244,7 +1238,7 @@ dist_patch_DATA =						\
   %D%/packages/patches/python-treelib-remove-python2-compat.patch	\
   %D%/packages/patches/elm-offline-package-registry.patch	\
   %D%/packages/patches/elm-reactor-static-files.patch		\
-  %D%/packages/patches/emacs-agent-shell-fix-tests.patch        \
+  %D%/packages/patches/emacs-buttercup-1.38-native-comp-spy-on-trampoline-scope.patch	\
   %D%/packages/patches/emacs-deferred-fix-number-of-arguments.patch	\
   %D%/packages/patches/emacs-disable-jit-compilation.patch			\
   %D%/packages/patches/emacs-doc-toc-shell-commands.patch	\
@@ -1301,7 +1295,6 @@ dist_patch_DATA =						\
   %D%/packages/patches/fbgemm-use-system-libraries.patch	\
   %D%/packages/patches/fbreader-curl-7.62.patch		\
   %D%/packages/patches/fbreader-fix-icon.patch		\
-  %D%/packages/patches/fdroidcl-fix-tests.patch		\
   %D%/packages/patches/fenics-dolfin-algorithm.patch		\
   %D%/packages/patches/fenics-dolfin-demo-init.patch		\
   %D%/packages/patches/fenics-dolfin-boost.patch		\
@@ -1368,8 +1361,16 @@ dist_patch_DATA =						\
   %D%/packages/patches/ganeti-disable-version-symlinks.patch	\
   %D%/packages/patches/ganeti-haskell-pythondir.patch		\
   %D%/packages/patches/ganeti-lens-compat.patch			\
+  %D%/packages/patches/ganeti-openssh-test-fix.patch		\
+  %D%/packages/patches/ganeti-pyyaml-compat.patch		\
+  %D%/packages/patches/ganeti-procps-compat.patch		\
+  %D%/packages/patches/ganeti-reorder-arbitrary-definitions.patch	\
+  %D%/packages/patches/ganeti-relax-dependencies.patch		\
   %D%/packages/patches/ganeti-shepherd-master-failover.patch	\
   %D%/packages/patches/ganeti-shepherd-support.patch		\
+  %D%/packages/patches/ganeti-sphinx-import.patch		\
+  %D%/packages/patches/ganeti-template-haskell-2.17.patch	\
+  %D%/packages/patches/ganeti-template-haskell-2.18.patch	\
   %D%/packages/patches/gawk-shell.patch				\
   %D%/packages/patches/gcc-arm-bug-71399.patch			\
   %D%/packages/patches/gcc-arm-link-spec-fix.patch		\
@@ -1465,6 +1466,7 @@ dist_patch_DATA =						\
   %D%/packages/patches/ghostscript-no-header-creationdate.patch \
   %D%/packages/patches/gimp-fix-metadata-editor.patch		\
   %D%/packages/patches/gimp-fix-tiff-load.patch			\
+  %D%/packages/patches/git-clar-path-max.patch			\
   %D%/packages/patches/git-filter-repo-generate-doc.patch	\
   %D%/packages/patches/gklib-suitesparse.patch			\
   %D%/packages/patches/glib-appinfo-watch.patch			\
@@ -1509,8 +1511,6 @@ dist_patch_DATA =						\
   %D%/packages/patches/glibc-reinstate-prlimit64-fallback.patch	\
   %D%/packages/patches/glibc-supported-locales.patch     	\
   %D%/packages/patches/glibc-versioned-locpath.patch		\
-  %D%/packages/patches/glog-windows-h-nonwindows.patch		\
-  %D%/packages/patches/glycin-sandbox-Adapt-bwrap-invocation.patch	\
   %D%/packages/patches/gmime-disable-tests.patch		\
   %D%/packages/patches/gmp-arm-asm-nothumb.patch		\
   %D%/packages/patches/gmp-faulty-test.patch			\
@@ -1585,9 +1585,7 @@ dist_patch_DATA =						\
   %D%/packages/patches/gtk3-respect-GUIX_GTK3_PATH.patch	\
   %D%/packages/patches/gtk3-respect-GUIX_GTK3_IM_MODULE_FILE.patch \
   %D%/packages/patches/gtk-doc-respect-xml-catalog.patch	\
-  %D%/packages/patches/gtk-doc-mkhtml-test-fix.patch	        \
+  %D%/packages/patches/gtk-doc-mkhtml-test-fix.patch	\
-  %D%/packages/patches/gtk4-demo-reproducible.patch             \
-  %D%/packages/patches/gtk4-needs-udmabuf.patch                 \
   %D%/packages/patches/gtk4-respect-GUIX_GTK4_PATH.patch    	\
   %D%/packages/patches/gtkglext-disable-disable-deprecated.patch \
   %D%/packages/patches/gtksourceview-2-add-default-directory.patch \
@@ -1618,6 +1616,7 @@ dist_patch_DATA =						\
   %D%/packages/patches/hurd-refcounts-assert.patch		\
   %D%/packages/patches/hurd-rumpdisk-no-hd.patch		\
   %D%/packages/patches/hurd-startup.patch			\
+  %D%/packages/patches/hwloc-1-test-btrfs.patch			\
   %D%/packages/patches/hwloc-add-with-opencl.patch		\
   %D%/packages/patches/i3lock-blur-fix-build-on-gcc-10.patch	\
   %D%/packages/patches/i7z-gcc-10.patch				\
@@ -1653,7 +1652,6 @@ dist_patch_DATA =						\
   %D%/packages/patches/id3lib-CVE-2007-4460.patch			\
   %D%/packages/patches/id3lib-UTF16-writing-bug.patch			\
   %D%/packages/patches/ilmbase-fix-tests.patch			\
-  %D%/packages/patches/inetutils-drop-test.patch                \
   %D%/packages/patches/inferno-fix-crash.patch		\
   %D%/packages/patches/iniparser-remove-fetchcontent-usage.patch		\
   %D%/packages/patches/inkscape-libxml2.patch		\
@@ -1665,7 +1663,6 @@ dist_patch_DATA =						\
   %D%/packages/patches/isl-0.11.1-aarch64-support.patch		\
   %D%/packages/patches/ispell-for-linphone-cmake.patch		\
   %D%/packages/patches/jami-avutil-link.patch   		\
-  %D%/packages/patches/jami-libjami-cmake.patch			\
   %D%/packages/patches/jamvm-1.5.1-aarch64-support.patch	\
   %D%/packages/patches/jamvm-1.5.1-armv7-support.patch	\
   %D%/packages/patches/jamvm-2.0.0-aarch64-support.patch	\
@@ -1677,7 +1674,6 @@ dist_patch_DATA =						\
   %D%/packages/patches/java-commons-collections-fix-java8.patch \
   %D%/packages/patches/java-guava-remove-annotation-deps.patch \
   %D%/packages/patches/java-jeromq-fix-tests.patch		\
-  %D%/packages/patches/java-jtidy-remove-xerces-dependency.patch	\
   %D%/packages/patches/java-openjfx-build-jdk_version.patch     \
   %D%/packages/patches/java-powermock-fix-java-files.patch		\
   %D%/packages/patches/java-simple-xml-fix-tests.patch		\
@@ -1686,8 +1682,6 @@ dist_patch_DATA =						\
   %D%/packages/patches/java-xerces-build_dont_unzip.patch	\
   %D%/packages/patches/java-xerces-xjavac_taskdef.patch	\
   %D%/packages/patches/jbr-17-xcursor-no-dynamic.patch	\
-  %D%/packages/patches/jbr-25-wayland-drag-icon.patch	\
-  %D%/packages/patches/jbr-25-wayland-intra-jvm-dnd.patch	\
   %D%/packages/patches/jdk-currency-time-bomb.patch		\
   %D%/packages/patches/jdk-currency-time-bomb2.patch		\
   %D%/packages/patches/jfsutils-add-sysmacros.patch		\
@@ -1704,6 +1698,7 @@ dist_patch_DATA =						\
   %D%/packages/patches/libcss-check-format.patch		\
   %D%/packages/patches/libeb-gcc-14.patch			\
   %D%/packages/patches/libextractor-tidy-support.patch		\
+  %D%/packages/patches/libfossil-skip-amalgamation.patch	\
   %D%/packages/patches/libftdi-fix-paths-when-FTDIPP-set.patch	\
   %D%/packages/patches/libgeotiff-fix-tests-with-proj-9.1.1.patch	\
   %D%/packages/patches/libgeotiff-fix-tests-with-proj-9.3.0.patch	\
@@ -1748,6 +1743,7 @@ dist_patch_DATA =						\
   %D%/packages/patches/kio-search-smbd-on-PATH.patch		\
   %D%/packages/patches/kismet-unbundle-boost.patch		\
   %D%/packages/patches/kissfft-tflite-micro.patch               \
+  %D%/packages/patches/kitty-fix-wayland-protocols.patch	\
   %D%/packages/patches/kmod-module-directory.patch		\
   %D%/packages/patches/kmscon-8-runtime-keymap-switch.patch	\
   %D%/packages/patches/knot-remove-runtime-deps.patch		\
@@ -1862,7 +1858,6 @@ dist_patch_DATA =						\
   %D%/packages/patches/linux-libre-arm64-mnt-reform-revert-vop2-display-modes.patch	\
   %D%/packages/patches/linux-pam-no-setfsuid.patch		\
   %D%/packages/patches/linux-pam-unix_chkpwd.patch		\
-  %D%/packages/patches/linux-shmem-hurd-xattr.patch		\
   %D%/packages/patches/lirc-localstatedir.patch			\
   %D%/packages/patches/lirc-reproducible-build.patch		\
   %D%/packages/patches/llvm-13-gcc-14.patch			\
@@ -1881,10 +1876,10 @@ dist_patch_DATA =						\
   %D%/packages/patches/lua-5.4-pkgconfig.patch			\
   %D%/packages/patches/lua-5.4-liblua-so.patch			\
   %D%/packages/patches/lua-5.4-search-paths.patch		\
-  %D%/packages/patches/lua-5.5-search-paths.patch		\
   %D%/packages/patches/lua-5.x-search-path-helpers.patch	\
   %D%/packages/patches/lua-lgi-fix-pango.patch			\
   %D%/packages/patches/lua-lgi-fix-ref.patch			\
+  %D%/packages/patches/luanti-paths.patch			\
   %D%/packages/patches/lugaru-fix-sound.patch			\
   %D%/packages/patches/luit-posix.patch				\
   %D%/packages/patches/lxc-no-static-bin.patch	\
@@ -1943,6 +1938,7 @@ dist_patch_DATA =						\
   %D%/packages/patches/modglue-fix-build.patch		\
   %D%/packages/patches/modem-manager-fix-test-wrapper.patch	\
   %D%/packages/patches/module-init-tools-moduledir.patch	\
+  %D%/packages/patches/monero-use-system-miniupnpc.patch			\
   %D%/packages/patches/mono-1.2.6-bootstrap.patch		\
   %D%/packages/patches/mono-1.9.1-add-MONO_CREATE_IMAGE_VERSION.patch		\
   %D%/packages/patches/mono-1.9.1-fixes.patch			\
@@ -1967,7 +1963,7 @@ dist_patch_DATA =						\
   %D%/packages/patches/mswebrtc-cmake.patch			\
   %D%/packages/patches/mtools-mformat-uninitialized.patch	\
   %D%/packages/patches/mupen64plus-ui-console-notice.patch	\
-  %D%/packages/patches/musl-CVE-2026-40200.patch		\
+  %D%/packages/patches/musl-cross-locale.patch			\
   %D%/packages/patches/mutt-store-references.patch		\
   %D%/packages/patches/m17n-lib-1.8.0-use-pkg-config-for-freetype.patch	\
   %D%/packages/patches/nanosvg-prusa-slicer.patch		\
@@ -1978,12 +1974,6 @@ dist_patch_DATA =						\
   %D%/packages/patches/netcdf-date-time.patch			\
   %D%/packages/patches/netdde-build-fix.patch			\
   %D%/packages/patches/netdde-csum.patch			\
-  %D%/packages/patches/java-apache-xml-commons-resolver-1.2-netbeans.patch \
-  %D%/packages/patches/java-simplevalidation-1.14.1.patch	\
-  %D%/packages/patches/netbeans-25-nativeexecution-paths.patch \
-  %D%/packages/patches/netbeans-25-terminal-no-login-shell.patch \
-  %D%/packages/patches/netbeans-25-source-only-build.patch	\
-  %D%/packages/patches/netbeans-25-wayland-font-rendering.patch	\
   %D%/packages/patches/netpbm-CVE-2017-2586.patch		\
   %D%/packages/patches/netpbm-CVE-2017-2587.patch		\
   %D%/packages/patches/netsurf-message-timestamp.patch		\
@@ -1993,7 +1983,6 @@ dist_patch_DATA =						\
   %D%/packages/patches/nhc98-c-update.patch			\
   %D%/packages/patches/nheko-0-12-1-fix-rendering-replies.patch	\
   %D%/packages/patches/nix-dont-build-html-doc.diff		\
-  %D%/packages/patches/nlohmann_json_fix_char8_t.patch		\
   %D%/packages/patches/nfs4-acl-tools-0.3.7-fixpaths.patch	\
   %D%/packages/patches/neovim-tree-sitter-grammar-path.patch	\
   %D%/packages/patches/network-manager-plugin-ownership.patch	\
@@ -2010,13 +1999,10 @@ dist_patch_DATA =						\
   %D%/packages/patches/nss-3.115-disable-broken-tests.patch     \
   %D%/packages/patches/nss-3.115-disable-pkix-ocsp-tests.patch  \
   %D%/packages/patches/ntp-fix-dereferencing-the-wrong-variable.patch   \
-  %D%/packages/patches/ntfs-3g-autoconf-sbin-helpers.patch   \
-  %D%/packages/patches/ntfs-3g-consistent-sbindir-usage.patch   \
   %D%/packages/patches/nvi-add-function-prototypes.patch	\
   %D%/packages/patches/nvi-assume-preserve-path.patch		\
   %D%/packages/patches/nvi-dbpagesize-binpower.patch		\
   %D%/packages/patches/nvi-db4.patch				\
-  %D%/packages/patches/obs-advanced-masks-nlohmann-json.patch	\
   %D%/packages/patches/obs-modules-location.patch		\
   %D%/packages/patches/ocaml-ctypes-test-oo.patch		\
   %D%/packages/patches/ocaml-multiple-definitions.patch		\
@@ -2024,6 +2010,7 @@ dist_patch_DATA =						\
   %D%/packages/patches/ocaml-4.07-dynamically-allocate-signal-stack.patch	\
   %D%/packages/patches/ocaml-4.09-dynamically-allocate-signal-stack.patch	\
   %D%/packages/patches/ocaml-4.09-multiple-definitions.patch	\
+  %D%/packages/patches/ogs-6.5.7-netcdfconverter.patch \
   %D%/packages/patches/omake-fix-non-determinism.patch	\
   %D%/packages/patches/oneko-remove-nonfree-characters.patch	\
   %D%/packages/patches/onetbb-other-arches.patch	\
@@ -2078,9 +2065,9 @@ dist_patch_DATA =						\
   %D%/packages/patches/openssl-3.0-c-rehash-in.patch		\
   %D%/packages/patches/openssl-hurd64.patch			\
   %D%/packages/patches/opentaxsolver-file-browser-fix.patch     \
+  %D%/packages/patches/open-zwave-hidapi.patch			\
   %D%/packages/patches/opusfile-CVE-2022-47021.patch		\
   %D%/packages/patches/orbit2-fix-array-allocation-32bit.patch \
-  %D%/packages/patches/orca-fix-gst-init-check-call.patch \
   %D%/packages/patches/orpheus-cast-errors-and-includes.patch	\
   %D%/packages/patches/ots-no-include-missing-file.patch	\
   %D%/packages/patches/owncloud-disable-updatecheck.patch	\
@@ -2111,7 +2098,6 @@ dist_patch_DATA =						\
   %D%/packages/patches/python-3.11-fix-tests.patch		\
   %D%/packages/patches/python-3.12-fix-tests.patch		\
   %D%/packages/patches/python-anyio-unuse-exceptiongroup-in-test.patch	\
-  %D%/packages/patches/python-beangulp-click-8.2-compat.patch	\
   %D%/packages/patches/python-bed-reader-use-store-samples.patch	\
   %D%/packages/patches/python-chai-drop-python2.patch		\
   %D%/packages/patches/python-clarabel-blas.patch		\
@@ -2134,20 +2120,16 @@ dist_patch_DATA =						\
   %D%/packages/patches/python-pyreadstat-link-libiconv.patch	\
   %D%/packages/patches/python-sip-include-dirs.patch	\
   %D%/packages/patches/python-scikit-build-setuptools-compat.patch	\
-  %D%/packages/patches/python-scikit-image-fix-python-pillow.patch	\
   %D%/packages/patches/python-sgmllib3k-assertions.patch	\
   %D%/packages/patches/python-sphobjinv-defer-ssl-import.patch	\
   %D%/packages/patches/python-sphinx-prompt-docutils-0.19.patch	\
   %D%/packages/patches/python-sshtunnel-pep518.patch	\
   %D%/packages/patches/python-zeroc-ice-3.6.5-python-3.11-support.patch	\
-  %D%/packages/patches/python-zeroc-ice-3.6.5-python-3.12-support.patch	\
-  %D%/packages/patches/python-zipfile2-python-3.12-support.patch	\
   %D%/packages/patches/qcodeeditor-qt6.patch			\
   %D%/packages/patches/qtdeclarative-5-disable-qmlcache.patch	\
   %D%/packages/patches/qtdeclarative-disable-qmlcache.patch	\
   %D%/packages/patches/qtlocation-5.15.8-mapboxgl-gcc13.patch	\
   %D%/packages/patches/qtwebengine-revert-egl.patch		\
-  %D%/packages/patches/qtwebengine5-python312-six-compat.patch	\
   %D%/packages/patches/quodlibet-disable-bundled-packages.patch	\
   %D%/packages/patches/qxlsx-fix-include-directory.patch	\
   %D%/packages/patches/schiffbruch-fix-build-for-gcc-13.patch	\
@@ -2188,8 +2170,6 @@ dist_patch_DATA =						\
   %D%/packages/patches/perl-www-curl-remove-symbol.patch	\
   %D%/packages/patches/perl-xml-libxml-fix-function-prototypes.patch	\
   %D%/packages/patches/phoronix-test-suite-fsdg.patch		\
-  %D%/packages/patches/php-01-fix-expired-certificate.patch	\
-  %D%/packages/patches/php-02-fix-sni-tests.patch		\
   %D%/packages/patches/picprog-non-intel-support.patch		\
   %D%/packages/patches/pidgin-add-search-path.patch		\
   %D%/packages/patches/pinball-system-ltdl.patch		\
@@ -2257,7 +2237,6 @@ dist_patch_DATA =						\
   %D%/packages/patches/python-piexif-fix-tests-with-pillow-7.2.patch	\
   %D%/packages/patches/python-pillow-CVE-2022-45199.patch	\
   %D%/packages/patches/python-libxml2-utf8.patch		\
-  %D%/packages/patches/python-lsp-server-python-3.13-compatibility.patch	\
   %D%/packages/patches/python-memcached-syntax-warnings.patch	\
   %D%/packages/patches/python-mslice-matplotlib-3.6-compatibility.patch	\
   %D%/packages/patches/python-packaging-test-arch.patch		\
@@ -2273,7 +2252,6 @@ dist_patch_DATA =						\
   %D%/packages/patches/python-pytorch-system-libraries.patch	\
   %D%/packages/patches/python-pytorch-without-kineto.patch	\
   %D%/packages/patches/python-robotframework-sshlibrary-rf5-compat.patch \
-  %D%/packages/patches/python-py-ubjson-recursion-test.patch	\
   %D%/packages/patches/python-vaex-core-fix-tsl-use.patch	\
   %D%/packages/patches/python-vega-datasets-remove-la-riots-code.patch	\
   %D%/packages/patches/python-versioneer-guix-support.patch	\
@@ -2295,6 +2273,8 @@ dist_patch_DATA =						\
   %D%/packages/patches/qtbase-5-use-TZDIR.patch			\
   %D%/packages/patches/qtscript-disable-tests.patch		\
   %D%/packages/patches/quagga-reproducible-build.patch          \
+  %D%/packages/patches/quickjs-ng-64-bits-precision-on-i686.patch	\
+  %D%/packages/patches/quickjs-ng-fix-atomics.pause-on-32-bit.patch	\
   %D%/packages/patches/quilt-grep-compat.patch 			\
   %D%/packages/patches/qmk-firmware-fix-hacker-dvorak.patch 	\
   %D%/packages/patches/qtwayland-update-wayland-xml.patch	\
@@ -2410,13 +2390,10 @@ dist_patch_DATA =						\
   %D%/packages/patches/rust-1.78-unwinding-fix.patch		\
   %D%/packages/patches/rust-1.81-fix-riscv64-bootstrap.patch	\
   %D%/packages/patches/rust-candle-0.9.1-add-candle-onnx-to-workspace.patch	\
+  %D%/packages/patches/rust-codex-0.98.0-core-remove-self-dep.patch	\
   %D%/packages/patches/rust-codex-0.98.0-test-shebangs.patch	\
-  %D%/packages/patches/rust-codex-0.117.0-core-remove-self-dep.patch	\
+  %D%/packages/patches/rust-codex-0.98.0-test-timeout.patch	\
-  %D%/packages/patches/rust-codex-0.120.0-remove-libwebrtc.patch	\
+  %D%/packages/patches/rust-codex-0.98.0-windows-sandbox-protocol-version.patch	\
-  %D%/packages/patches/rust-codex-0.120.0-test-timeout.patch	\
-  %D%/packages/patches/rust-codex-0.124.0-code-mode-stub-toolname.patch	\
-  %D%/packages/patches/rust-codex-0.124.0-remove-patch-sections.patch	\
-  %D%/packages/patches/rust-librocksdb-sys-unbundled-sources.patch	\
   %D%/packages/patches/rust-ring-0.17-ring-core.patch		\
   %D%/packages/patches/rw-igraph-0.10.patch			\
   %D%/packages/patches/rxvt-unicode-fix-cursor-position.patch	\
@@ -2426,6 +2403,7 @@ dist_patch_DATA =						\
   %D%/packages/patches/sajson-build-with-gcc10.patch		\
   %D%/packages/patches/sane-look-for-plugins-in-SANE_BACKEND_LIB_PATH.patch	\
   %D%/packages/patches/sbc-fix-build-non-x86.patch		\
+  %D%/packages/patches/sbcl-fix-arm64-shared-lib.patch		\
   %D%/packages/patches/sbcl-aserve-add-HTML-5-elements.patch	\
   %D%/packages/patches/sbcl-aserve-fix-rfe12668.patch	\
   %D%/packages/patches/sbcl-burgled-batteries3-fix-signals.patch	\
@@ -2451,10 +2429,10 @@ dist_patch_DATA =						\
   %D%/packages/patches/seq24-rename-mutex.patch			\
   %D%/packages/patches/libsequoia-fix-ffi-Makefile.patch	\
   %D%/packages/patches/libsequoia-remove-store.patch		\
+  %D%/packages/patches/shakespeare-spl-fix-grammar.patch		\
   %D%/packages/patches/shared-mime-info-xdgmime-path.patch	\
   %D%/packages/patches/sharutils-CVE-2018-1000097.patch		\
   %D%/packages/patches/showtime-python-3.11-compat.patch        \
-  %D%/packages/patches/simpleitk-r-4.6.0.patch			\
   %D%/packages/patches/sipwitch-fix-build-with-exosip5.patch	\
   %D%/packages/patches/slim-config.patch			\
   %D%/packages/patches/slim-gcc-14.patch			\
@@ -2489,7 +2467,6 @@ dist_patch_DATA =						\
   %D%/packages/patches/swift-corelibs-libdispatch-5.7.3-modulemap.patch	\
   %D%/packages/patches/swift-llvm-5.7.3-linux.patch	\
   %D%/packages/patches/swig-support-gcc-12.patch		\
-  %D%/packages/patches/swig-support-r-4.6.0.patch		\
   %D%/packages/patches/swish-e-search.patch			\
   %D%/packages/patches/swish-e-format-security.patch		\
   %D%/packages/patches/t1lib-CVE-2010-2642.patch		\
@@ -2522,6 +2499,7 @@ dist_patch_DATA =						\
   %D%/packages/patches/texmacs-wayland-hidpi.patch	\
   %D%/packages/patches/tflite-micro_disable_download.patch 	\
   %D%/packages/patches/thefuck-test-environ.patch		\
+  %D%/packages/patches/thefuck-remove-broken-tests.patch	\
   %D%/packages/patches/tidy-CVE-2015-5522+5523.patch		\
   %D%/packages/patches/timewarrior-time-sensitive-tests.patch	\
   %D%/packages/patches/tinydir-fix-cbehave-test.patch		\
@@ -2537,7 +2515,6 @@ dist_patch_DATA =						\
   %D%/packages/patches/transcode-ffmpeg.patch	\
   %D%/packages/patches/trytond-add-guix_trytond_path.patch	\
   %D%/packages/patches/ttf2eot-cstddef.patch			\
-  %D%/packages/patches/tuir-python-3.12-support.patch	\
   %D%/packages/patches/tuxpaint-stamps-path.patch		\
   %D%/packages/patches/tvm_fix_cpptest_build.patch              \
   %D%/packages/patches/twinkle-bcg729.patch			\
@@ -2615,7 +2592,6 @@ dist_patch_DATA =						\
   %D%/packages/patches/webrtc-audio-processing-big-endian.patch	\
   %D%/packages/patches/webrtc-audio-processing-byte-order-pointer-size.patch \
   %D%/packages/patches/webrtc-audio-processing-x86-no-sse.patch	\
-  %D%/packages/patches/websocketpp-boost-compat.patch		\
   %D%/packages/patches/websocketpp-fix-for-cmake-3.15.patch	\
   %D%/packages/patches/wmctrl-64-fix.patch			\
   %D%/packages/patches/wmfire-dont-inline-draw-fire.patch	\
@@ -2628,7 +2604,6 @@ dist_patch_DATA =						\
   %D%/packages/patches/x265-arm-flags.patch			\
   %D%/packages/patches/x265-4-arm-flags.patch			\
   %D%/packages/patches/xdg-desktop-portal-wlr-harcoded-length.patch\
-  %D%/packages/patches/xdmf-3.0.0-hdf5.patch \
   %D%/packages/patches/xf86-video-siliconmotion-fix-ftbfs.patch \
   %D%/packages/patches/xfig-Enable-error-message-for-missing-libraries.patch		\
   %D%/packages/patches/xfig-Fix-double-free-when-requesting-MediaBox.patch		\

gnu/machine/hetzner.scm

@@ -2,7 +2,6 @@
 ;;; Copyright © 2024 Roman Scherer <roman@burningswell.com>
 ;;; Copyright © 2025 Owen T. Heisler <writer@owenh.net>
 ;;; Copyright © 2025 Remco van 't Veer <remco@remworks.net>
-;;; Copyright © 2026 Maxim Cournoyer <maxim@guixotic.coop>
 ;;;
 ;;; This file is part of GNU Guix.
 ;;;
@@ -37,7 +36,6 @@
   #:use-module (gnu system)
   #:use-module (guix base32)
   #:use-module (guix colors)
-  #:use-module (guix deprecation)
   #:use-module (guix derivations)
   #:use-module (guix diagnostics)
   #:use-module (guix gexp)
@@ -57,7 +55,6 @@
   #:use-module (ice-9 string-fun)
   #:use-module (ice-9 textual-ports)
   #:use-module (json)
-  #:use-module ((rnrs base) #:select (assert))
   #:use-module (srfi srfi-1)
   #:use-module (srfi srfi-2)
   #:use-module (srfi srfi-34)
@@ -69,10 +66,8 @@
   #:use-module (ssh session)
   #:use-module (ssh sftp)
   #:use-module (ssh shell)
-  #:export (%hetzner-os-arm             ;deprecated
+  #:export (%hetzner-os-arm
-            %hetzner-os-x86             ;deprecated
+            %hetzner-os-x86
-            make-hetzner-os
-
             deploy-hetzner
             hetzner-configuration
             hetzner-configuration-allow-downgrades?
@@ -87,7 +82,6 @@
             hetzner-configuration-server-type
             hetzner-configuration-ssh-key
             hetzner-configuration-ssh-public-key
-            hetzner-configuration-user
             hetzner-configuration?
             hetzner-environment-type))
 
@@ -104,7 +98,7 @@
 
 ;; Operating system for arm servers using UEFI boot mode.
 
-(define %hetzner-os-arm/efi
+(define %hetzner-os-arm
   (operating-system
     (host-name "guix-arm")
     (bootloader
@@ -134,9 +128,9 @@
 
 ;; Operating system for x86 servers using BIOS boot mode.
 
-(define %hetzner-os-x86/bios
+(define %hetzner-os-x86
   (operating-system
-    (inherit %hetzner-os-arm/efi)
+    (inherit %hetzner-os-arm)
     (host-name "guix-x86")
     (bootloader
      (bootloader-configuration
@@ -152,51 +146,6 @@
              (type "ext4"))
            %base-file-systems))))
 
-(define %hetzner-os-x86/efi
-  (operating-system
-    (inherit %hetzner-os-arm/efi)
-    (host-name "guix-x86")
-    (initrd-modules
-     (cons "virtio_scsi" %base-initrd-modules))))
-
-(define (server-type-name->arch type-name)
-  "Return a symbol corresponding to the server type architecture, e.g.
-@code{'x86} or @code{'arm}."
-  (cond
-    ((string-prefix-ci? "cax" type-name)
-     'arm)
-    (else
-     'x86)))
-
-(define (server-type-name->bootloader type-name)
-  "Return a symbol corresponding to the bootloader type, e.g.
-@code{'efi} or @code{'bios}."
-  (if (eq? 'arm (server-type-name->arch type-name))
-      'efi
-      (cond
-       ((string-prefix-ci? "cx" type-name)
-        'bios)                          ;old, cost-optimized x86 servers
-       (else
-        'efi))))           ;newer, regular performance/general purpose servers
-
-(define* (make-hetzner-os server-type-name)
-  "Return an operating server customized for SERVER-TYPE-NAME, a string like
-\"cx23\" or \"cax11\", denoting the Hetzner virtual server type."
-  (match (server-type-name->arch server-type-name)
-    ('arm %hetzner-os-arm/efi)
-    ('x86
-     (match (server-type-name->bootloader server-type-name)
-       ('bios %hetzner-os-x86/bios)
-       ('efi %hetzner-os-x86/efi)))))
-
-(define-deprecated %hetzner-os-x86
-  make-hetzner-os
-  %hetzner-os-x86/bios)
-
-(define-deprecated %hetzner-os-arm
-  make-hetzner-os
-  %hetzner-os-arm/efi)
-
 (define (operating-system-authorize os)
   "Authorize the OS with the public signing key of the current machine."
   (if (file-exists? %public-key-file)
@@ -242,11 +191,6 @@ Have you run 'guix archive --generate-key'?")
 ;;; Hetzner configuration.
 ;;;
 
-;;; This parameter overrides the value returned by
-;;; `hetzner-configuration-ssh-key'.
-(define %hetzner-ssh-key-file
-  (make-parameter #f))
-
 (define-record-type* <hetzner-configuration> hetzner-configuration
   make-hetzner-configuration hetzner-configuration? this-hetzner-configuration
   (allow-downgrades? hetzner-configuration-allow-downgrades? ; boolean
@@ -258,7 +202,7 @@ Have you run 'guix archive --generate-key'?")
   (build-locally? hetzner-configuration-build-locally? ; boolean
                   (default #t))
   (delete? hetzner-configuration-delete? ; boolean
-           (default #t))
+           (default #f))
   (labels hetzner-configuration-labels ; list of strings
           (default '()))
   (location hetzner-configuration-location ; #f | string
@@ -269,39 +213,26 @@ Have you run 'guix archive --generate-key'?")
         (default #t))
   (ipv6 hetzner-configuration-ipv6      ; boolean | string
         (default #t))
-  (ssh-public-key hetzner-configuration-ssh-public-key* ; #f | public-key | string
+  (ssh-public-key hetzner-configuration-ssh-public-key ; public-key | string
                   (thunked)
-                  (default (and=> (hetzner-configuration-ssh-key
+                  (default (public-key-from-file (hetzner-configuration-ssh-key this-hetzner-configuration)))
-                                   this-hetzner-configuration)
+                  (sanitize
-                                  public-key-from-file))
+                   (lambda (value)
-                  (sanitize (lambda (value)
+                     (if (string? value) (public-key-from-file value) value))))
-                              (if (string? value)
+  (ssh-key hetzner-configuration-ssh-key
-                                  (public-key-from-file value)
+           (default #f))) ; #f | string
-                                  value))))
-  (ssh-key hetzner-configuration-ssh-key* ; #f | string
-           (default #f))
-  (user hetzner-configuration-user      ;string
-        (default "root")))
 
-(define (hetzner-configuration-ssh-key config)
+(define (hetzner-configuration-ssh-key-fingerprint config)
-  (or (%hetzner-ssh-key-file)
+  "Return the SSH public key fingerprint of CONFIG as a string."
-      (hetzner-configuration-ssh-key* config)))
+  (and-let* ((pubkey (hetzner-configuration-ssh-public-key config))
-
+             (hash (get-public-key-hash pubkey 'md5)))
-(define (hetzner-configuration-ssh-public-key config)
-  (or (and=> (%hetzner-ssh-key-file) public-key-from-file)
-      (hetzner-configuration-ssh-public-key* config)))
-
-(define (public-key->fingerprint public-key)
-  "Return the SSH public key fingerprint of PUBLIC-KEY, a Guile-SSH public key
-object, in the expected format for the Hetzner API."
-  (let ((hash (get-public-key-hash public-key 'md5)))
     (bytevector->hex-string hash)))
 
-(define (public-key->string-with-type public-key)
+(define (hetzner-configuration-ssh-key-public config)
-  "Return the SSH public key string of PUBLIC-KEY, a Guile-SSH public key
+  "Return the SSH public key of CONFIG as a string."
-object, in the expected format for the Hetzner API."
+  (let ((public-key (hetzner-configuration-ssh-public-key config)))
-  (format #f "ssh-~a ~a" (get-key-type public-key)
+    (format #f "ssh-~a ~a" (get-key-type public-key)
-          (public-key->string public-key)))
+            (public-key->string public-key))))
 
 
 ;;;
@@ -314,26 +245,21 @@ object, in the expected format for the Hetzner API."
          ;; Get the operating system WITHOUT the provenance service to avoid a
          ;; duplicate symlink conflict in the store.
          (os ((@@ (gnu machine) %machine-operating-system) target)))
-    (match-record config <hetzner-configuration>
+    (machine
-                  ( authorize? allow-downgrades? build-locally? user)
+     (inherit target)
-      (machine
+     (operating-system
-        (inherit target)
+       (if (hetzner-configuration-authorize? config)
-        (operating-system
+           (operating-system-authorize os)
-          (if authorize?
+           os))
-              (operating-system-authorize os)
+     (environment managed-host-environment-type)
-              os))
+     (configuration
-        (environment managed-host-environment-type)
+      (machine-ssh-configuration
-        (configuration
+       (allow-downgrades? (hetzner-configuration-allow-downgrades? config))
-         (machine-ssh-configuration
+       (authorize? (hetzner-configuration-authorize? config))
-           (allow-downgrades? allow-downgrades?)
+       (build-locally? (hetzner-configuration-build-locally? config))
-           (authorize? authorize?)
+       (host-name (hetzner-server-public-ipv4 server))
-           (build-locally? build-locally?)
+       (identity (hetzner-configuration-ssh-key config))
-           (host-name (hetzner-server-public-ipv4 server))
+       (system (hetzner-server-system server)))))))
-           ;; XXX: match-record doesn't make use of custom accessors to obtain
-           ;; the value, so we can't bind SSH-KEY with it.
-           (identity (hetzner-configuration-ssh-key config))
-           (system (hetzner-server-system server))
-           (user user)))))))
 
 (define (hetzner-machine-location machine)
   "Find the location of MACHINE on the Hetzner API."
@@ -437,43 +363,45 @@ Available locations:~%~%~a~%~%For more details, see: ~a")
   "Return the form to bootstrap an operating system on SERVER."
   (let* ((os (machine-operating-system machine))
          (system (hetzner-server-system server))
-         (type-name (hetzner-server-type-name (hetzner-server-type server)))
          (arm? (equal? "arm" (hetzner-server-architecture server)))
          (x86? (equal? "x86" (hetzner-server-architecture server)))
-         (efi? (equal? 'efi (server-type-name->bootloader type-name)))
          (root-fs-type (operating-system-root-file-system-type os)))
     `(operating-system
        (host-name ,(operating-system-host-name os))
        (timezone "Etc/UTC")
        (bootloader (bootloader-configuration
-                     (bootloader ,(if efi?
+                    (bootloader ,(cond (arm? 'grub-efi-bootloader)
-                                      'grub-efi-bootloader
+                                       (x86? 'grub-bootloader)))
-                                      'grub-bootloader))
+                    (targets ,(cond (arm? '(list "/boot/efi"))
-                     (targets ,(if efi?
+                                    (x86? '(list "/dev/sda"))))
-                                   '(list "/boot/efi")
+                    (terminal-outputs '(console))))
-                                   '(list "/dev/sda")))
-                     (terminal-outputs '(console))))
        (initrd-modules (append
                         ,(cond (arm? '(list "sd_mod" "virtio_scsi"))
                                (x86? '(list "virtio_scsi")))
                         %base-initrd-modules))
-       (file-systems (cons* (file-system
+       (file-systems ,(cond
-                              (mount-point "/")
+                       (arm? `(cons* (file-system
-                              (device "/dev/sda1")
+                                       (mount-point "/")
-                              (type ,root-fs-type))
+                                       (device "/dev/sda1")
-                            ,@(if efi?
+                                       (type ,root-fs-type))
-                                  '((file-system
+                                     (file-system
-                                      (mount-point "/boot/efi")
+                                       (mount-point "/boot/efi")
-                                      (device "/dev/sda15")
+                                       (device "/dev/sda15")
-                                      (type "vfat")))
+                                       (type "vfat"))
-                                  '())
+                                     %base-file-systems))
-                            %base-file-systems))
+                       (x86? `(cons* (file-system
+                                       (mount-point "/")
+                                       (device "/dev/sda1")
+                                       (type ,root-fs-type))
+                                     %base-file-systems))))
        (services
-        (cons* (service dhcpcd-service-type)
+        ;; guix 1.4.0 does not have dhcpcd-service-type,
+        ;; so we use dhcp-client-service-type here.
+        (cons* (service dhcp-client-service-type)
                (service openssh-service-type
                         (openssh-configuration
-                          (openssh openssh-sans-x)
+                         (openssh openssh-sans-x)
-                          (permit-root-login 'prohibit-password)))
+                         (permit-root-login 'prohibit-password)))
                %base-services)))))
 
 (define (rexec-verbose session cmd)
@@ -495,9 +423,8 @@ values: list of output lines returned by CMD and its exit code."
 
 (define (hetzner-machine-ssh-key machine)
   "Find the SSH key for MACHINE on the Hetzner API."
-  (and-let* ((config (machine-configuration machine))
+  (let* ((config (machine-configuration machine))
-             (public-key (hetzner-configuration-ssh-public-key config))
+         (expected (hetzner-configuration-ssh-key-fingerprint config)))
-             (expected (public-key->fingerprint public-key)))
     (find (lambda (ssh-key)
             (equal? expected (hetzner-ssh-key-fingerprint ssh-key)))
           (hetzner-api-ssh-keys
@@ -510,12 +437,10 @@ values: list of output lines returned by CMD and its exit code."
     (format #t "creating ssh key for '~a'...\n" name)
     (let* ((config (machine-configuration machine))
            (api (hetzner-configuration-api config))
-           (pubkey (hetzner-configuration-ssh-public-key config))
-           (_ (assert pubkey))
            (ssh-key (hetzner-api-ssh-key-create
-                     api
+                     (hetzner-configuration-api config)
-                     (public-key->fingerprint pubkey)
+                     (hetzner-configuration-ssh-key-fingerprint config)
-                     (public-key->string-with-type pubkey)
+                     (hetzner-configuration-ssh-key-public config)
                      #:labels (hetzner-configuration-labels config))))
       (format #t "successfully created ssh key for '~a'\n" name)
       ssh-key)))
@@ -541,16 +466,6 @@ values: list of output lines returned by CMD and its exit code."
     (formatted-message (G_ "primary ip '~a' does not exist.")
                        name))))
 
-(define temporary-ssh-key-file
-  (let ((ssh-key-file (port-filename (mkstemp "/tmp/hetzner-key-XXXXXX")))
-        (ssh-key #f))
-    (lambda ()
-      "Return a dynamically created, temporary private SSH key."
-      (unless ssh-key
-        (set! ssh-key (make-keypair 'ed25519))
-        (private-key-to-file ssh-key ssh-key-file))
-      ssh-key-file)))
-
 (define (hetzner-machine-create-server machine)
   "Create the Hetzner server for MACHINE."
   (let* ((config (machine-configuration machine))
@@ -558,14 +473,13 @@ values: list of output lines returned by CMD and its exit code."
          (server-type (hetzner-configuration-server-type config)))
     (format #t "creating '~a' server for '~a'...\n" server-type name)
     (let* ((ssh-key (hetzner-machine-ssh-key machine))
-           (_ (assert ssh-key))         ;required during provisioning
            (ipv4 (hetzner-configuration-ipv4 config))
            (ipv6 (hetzner-configuration-ipv6 config))
            (api (hetzner-configuration-api config))
            (server (hetzner-api-server-create
                     api
                     (machine-display-name machine)
-                    #:ssh-keys (list ssh-key)
+                    (list ssh-key)
                     #:ipv4 (if (string? ipv4)
                                (hetzner-primary-ip-id (hetzner-resolve-ip api ipv4))
                                ipv4)
@@ -613,15 +527,13 @@ values: list of output lines returned by CMD and its exit code."
     (write-known-host! ssh-session)))
 
 (define (hetzner-machine-enable-rescue-system machine server)
-  "Enable the rescue system on the Hetzner SERVER for MACHINE, provisioning it
+  "Enable the rescue system on the Hetzner SERVER for MACHINE."
-with the configured SSH key, or a dynamically created temporary one."
   (let* ((name (machine-display-name machine))
          (config (machine-configuration machine))
          (api (hetzner-configuration-api config))
-         (ssh-keys (and=> (hetzner-machine-ssh-key machine) list)))
+         (ssh-keys (list (hetzner-machine-ssh-key machine))))
     (format #t "enabling rescue system on '~a'...\n" name)
-    (let ((action (hetzner-api-server-enable-rescue-system
+    (let ((action (hetzner-api-server-enable-rescue-system api server ssh-keys)))
-                   api server #:ssh-keys ssh-keys)))
       (format #t "successfully enabled rescue system on '~a'\n" name)
       action)))
 
@@ -657,7 +569,6 @@ with the configured SSH key, or a dynamically created temporary one."
 (set! hetzner-machine-ssh-run-script hetzner-machine-ssh-run-script)
 
 (define (hetzner-machine-rescue-install-os machine ssh-session server)
-  "Init a minimal Guix System to bootstrap from."
   (let ((name (machine-display-name machine))
         (os (hetzner-machine-bootstrap-os-form machine server)))
     (format #t "installing guix operating system on '~a'...\n" name)
@@ -676,9 +587,9 @@ chmod 600 /mnt/root/.ssh/authorized_keys
 
 # Small instance don't have much disk space.  Bind mount the store of the
 # rescue system to the tmp directory of the new Guix system.
-mkdir -p /mnt/tmp/gnu
+mkdir -p /mnt/tmp/gnu/store
-mkdir -p /gnu
+mkdir -p /gnu/store
-mount --bind /mnt/tmp/gnu /gnu
+mount --bind /mnt/tmp/gnu/store /gnu/store
 
 wget -O /tmp/guix-install.sh https://guix.gnu.org/guix-install.sh
 chmod +x /tmp/guix-install.sh
@@ -754,8 +665,7 @@ apt-get install cloud-initramfs-growroot uidmap --assume-yes"))
       action)))
 
 (define (hetzner-machine-provision machine)
-  "Provision a Guix System bootstrap server for MACHINE on the Hetzner Cloud
+  "Provision a server for MACHINE on the Hetzner Cloud service."
-service."
   (with-exception-handler
       (lambda (exception)
         (let ((config (machine-configuration machine))
@@ -770,10 +680,12 @@ service."
         (let ((ssh-session (hetzner-machine-wait-for-ssh machine server)))
           (hetzner-machine-rescue-install-packages machine ssh-session)
           (hetzner-machine-rescue-partition machine ssh-session)
-          (hetzner-machine-rescue-install-os machine ssh-session server))
+          (hetzner-machine-rescue-install-os machine ssh-session server)
-        (hetzner-machine-reboot machine server)
+          (hetzner-machine-reboot machine server)
-        (hetzner-machine-authenticate-host machine server)
+          (sleep 5)
-        server))))
+          (hetzner-machine-authenticate-host machine server)
+          server)))
+    #:unwind? #t))
 
 (define (machine-not-provisioned machine)
   (formatted-message
@@ -799,47 +711,16 @@ an environment type of 'hetzner-environment-type'."
 ;;; System deployment.
 ;;;
 
-(define (cleanup-temporary-ssh-key/maybe api ssh-key)
-  "Delete the temporary SSH private key file from the file system and the
-Hetzner API, if one was created used."
-  (when (%hetzner-ssh-key-file)
-    (format #t "cleaning up temporary ssh key~%")
-    (delete-file (%hetzner-ssh-key-file))
-    (%hetzner-ssh-key-file #f)
-    (hetzner-api-ssh-key-delete api ssh-key)))
-
 (define (deploy-hetzner machine)
   "Internal implementation of 'deploy-machine' for 'machine' instances with an
 environment type of 'hetzner-environment-type'."
   (hetzner-machine-validate machine)
+  (unless (hetzner-machine-ssh-key machine)
+    (hetzner-machine-ssh-key-create machine))
+  (let ((server (or (hetzner-machine-server machine)
+                    (hetzner-machine-provision machine))))
+    (deploy-machine (hetzner-machine-delegate machine server))))
 
-  (define server (hetzner-machine-server machine))
-  (define config (machine-configuration machine))
-  (define api (hetzner-configuration-api config))
-  (define ssh-key #f)                   ;hetzner API key
-
-  ;; Provisioning requires uploading an SSH key via the Hetzner API to
-  ;; authenticate non-interactively with the newly created server.
-  (unless server                        ;provisioning?
-    (unless (hetzner-configuration-ssh-public-key config)
-      (format #t "using a temporary ssh key for provisioning~%")
-      (%hetzner-ssh-key-file (temporary-ssh-key-file)))
-    (set! ssh-key (or (hetzner-machine-ssh-key machine)
-                      (hetzner-machine-ssh-key-create machine))))
-
-  ;; Cleaning-up here is a bit tricky, as `deploy-machine' returns a monadic
-  ;; value immediately, to be executed later; this means the clean-up must be
-  ;; delayed until monadic evaluation time.
-  (let* ((server (or server (hetzner-machine-provision machine)))
-         (delegate-machine (hetzner-machine-delegate machine server)))
-    ;; FIXME: The clean-up in the guard does not run even when
-    ;; `deploy-machine' fails.
-    (guard (c (#t (cleanup-temporary-ssh-key/maybe api ssh-key)
-                  (raise c)))
-      (mlet %store-monad
-          ((value (deploy-machine delegate-machine)))
-        (cleanup-temporary-ssh-key/maybe api ssh-key)
-        (return value)))))
 
 
 ;;;

gnu/machine/hetzner/http.scm

@@ -1,6 +1,5 @@
 ;;; GNU Guix --- Functional package management for GNU
 ;;; Copyright © 2024 Roman Scherer <roman@burningswell.com>
-;;; Copyright © 2026 Maxim Cournoyer <maxim@guixotic.coop>
 ;;;
 ;;; This file is part of GNU Guix.
 ;;;
@@ -20,7 +19,6 @@
 (define-module (gnu machine hetzner http)
   #:use-module (guix diagnostics)
   #:use-module (guix i18n)
-  #:use-module (guix memoization)
   #:use-module (guix records)
   #:use-module (ice-9 iconv)
   #:use-module (ice-9 match)
@@ -53,7 +51,6 @@
             hetzner-api-action-wait
             hetzner-api-actions
             hetzner-api-create-ssh-key
-            hetzner-api-images
             hetzner-api-locations
             hetzner-api-primary-ips
             hetzner-api-request-body
@@ -84,23 +81,6 @@
             hetzner-error-code
             hetzner-error-message
             hetzner-error?
-            hetzner-image?
-            hetzner-image-id
-            hetzner-image-type
-            hetzner-image-status
-            hetzner-image-name
-            hetzner-image-description
-            hetzner-image-disk-size
-            hetzner-image-created
-            hetzner-image-created-from
-            hetzner-image-bound-to
-            hetzner-image-os-flavor
-            hetzner-image-os-version
-            hetzner-image-rapid-deploy
-            hetzner-image-protection
-            hetzner-image-deprecated
-            hetzner-image-deleted
-            hetzner-image-architecture
             hetzner-ipv4-blocked?
             hetzner-ipv4-dns-ptr
             hetzner-ipv4-id
@@ -168,7 +148,6 @@
             hetzner-ssh-key?
             make-hetzner-action
             make-hetzner-error
-            make-hetzner-image
             make-hetzner-ipv4
             make-hetzner-ipv6
             make-hetzner-location
@@ -189,19 +168,7 @@
   (make-parameter (getenv "GUIX_HETZNER_API_TOKEN")))
 
 ;; Ideally this would be a Guix image. Maybe one day.
-(define %hetzner-default-server-image
+(define %hetzner-default-server-image "debian-11")
-  (mlambda (api)
-    "Return the latest Debian image available.  This image gets used for the
-initial system provisioning phase, before Guix System takes over."
-    (let ((debian-images (filter (lambda (image)
-                                   (string=? "debian"
-                                             (hetzner-image-os-flavor image)))
-                                 (hetzner-api-images api))))
-      (hetzner-image-name
-       (last (sort debian-images
-                   (lambda (x y)
-                     (< (string->number (hetzner-image-os-version x))
-                        (string->number (hetzner-image-os-version y))))))))))
 
 ;; Falkenstein, Germany
 (define %hetzner-default-server-location "fsn1")
@@ -323,43 +290,6 @@ initial system provisioning phase, before Guix System takes over."
   (server-type hetzner-server-type "server_type"
                json->hetzner-server-type)) ; <hetzner-server-type>
 
-(define-json-mapping <hetzner-image>
-  make-hetzner-image hetzner-image? json->hetzner-image
-  (id hetzner-image-id)                             ;integer
-  (type hetzner-image-type)                         ;string
-  (status hetzner-image-status)                     ;string
-  (name hetzner-image-name "name" (null-or identity)) ;string | null
-  (description hetzner-image-description)           ;string
-  (image-size hetzner-image-size "image_size"       ;number | null (GiB)
-              (null-or identity))
-  (disk-size hetzner-image-disk-size "disk_size")         ;number (GiB)
-  (created hetzner-image-created)                         ;string (date)
-  (created-from hetzner-image-created-from "created_from" ;object | null
-                (null-or json->hetzner-image-created-from))
-  (bound-to hetzner-image-bound-to "bound_to" (null-or identity)) ;integer | null
-  (os-flavor hetzner-image-os-flavor "os_flavor")               ;string
-  (os-version hetzner-image-os-version "os_version"             ;string | null
-              (null-or identity))
-  (rapid-deploy hetzner-image-rapid-deploy "rapid_deploy") ;boolean
-  (protection hetzner-image-protection "protection"        ;object
-              json->hetzner-image-protection)
-  (deprecated hetzner-image-deprecated)      ;string
-  (deleted hetzner-image-deleted "deleted" (null-or identity)) ;null | string
-  (architecture hetzner-image-architecture)) ;string
-
-(define (null-or parser)
-  (lambda (value)
-    (if (eq? 'null value)
-        *unspecified*
-	(parser value))))
-
-(define-json-type <hetzner-image-created-from>
-  (id)                                  ;integer
-  (name))                               ;string
-
-(define-json-type <hetzner-image-protection>
-  (delete))                             ;boolean
-
 (define-json-mapping <hetzner-server-type>
   make-hetzner-server-type hetzner-server-type? json->hetzner-server-type
   (architecture hetzner-server-type-architecture) ; string
@@ -668,11 +598,11 @@ initial system provisioning phase, before Guix System takes over."
   (apply hetzner-api-list api "/locations" "locations" json->hetzner-location options))
 
 (define* (hetzner-api-server-create
-          api name #:key
+          api name ssh-keys
-          ssh-keys
+          #:key
           (ipv4 #f)
           (ipv6 #f)
-          (image (%hetzner-default-server-image api))
+          (image %hetzner-default-server-image)
           (labels '())
           (location %hetzner-default-server-location)
           (server-type %hetzner-default-server-type)
@@ -690,11 +620,7 @@ initial system provisioning phase, before Guix System takes over."
                           ,@(if (integer? ipv6) `(("ipv6" . ,ipv6)) '())))
                         ("location" . ,location)
                         ("server_type" . ,server-type)
-                        ,@(if ssh-keys
+                        ("ssh_keys" . ,(apply vector (map hetzner-ssh-key-id ssh-keys)))
-                              `(("ssh_keys" .
-                                 ,(apply vector (map hetzner-ssh-key-id
-                                                     ssh-keys))))
-                              '())
                         ("start_after_create" . ,start-after-create?)))))
     (hetzner-api-action-wait api (hetzner-api-body-action body))
     (json->hetzner-server (assoc-ref body "server"))))
@@ -705,15 +631,12 @@ initial system provisioning phase, before Guix System takes over."
     (hetzner-api-action-wait api (hetzner-api-body-action body))))
 
 (define* (hetzner-api-server-enable-rescue-system
-          api server #:key ssh-keys (type "linux64"))
+          api server ssh-keys #:key (type "linux64"))
   "Enable the rescue system for SERVER with the Hetzner API."
-  (let* ((ssh-keys (and ssh-keys
+  (let* ((ssh-keys (apply vector (map hetzner-ssh-key-id ssh-keys)))
-                        (apply vector (map hetzner-ssh-key-id ssh-keys))))
          (body (hetzner-api-post
                 api (hetzner-server-path server "/actions/enable_rescue")
-                #:body `(,@(if ssh-keys
+                #:body `(("ssh_keys" . ,ssh-keys)
-                               `(("ssh_keys" . ,ssh-keys))
-                               '())
                          ("type" . ,type)))))
     (hetzner-api-action-wait api (hetzner-api-body-action body))))
 
@@ -764,8 +687,3 @@ initial system provisioning phase, before Guix System takes over."
   "Get server types from the Hetzner API."
   (apply hetzner-api-list api "/server_types" "server_types"
          json->hetzner-server-type options))
-
-(define* (hetzner-api-images api . options)
-  "Get image types from the Hetzner API."
-  (apply hetzner-api-list api "/images" "images"
-         json->hetzner-image options))

gnu/packages.scm

@@ -164,12 +164,6 @@ flags."
              %default-package-module-path
              channels-scm))))
 
-(define (strip-trailing-slash s)
-  ;; Strip the trailing slash of a string, if present.
-  (if (string-suffix? "/" s)
-      (string-drop-right s 1)
-      s))
-
 (define %patch-path
   ;; Define it after '%package-module-path' so that '%load-path' contains user
   ;; directories, allowing patches in $GUIX_PACKAGE_PATH to be found.
@@ -178,7 +172,7 @@ flags."
           (if (string=? directory %distro-root-directory)
               (string-append directory "/gnu/packages/patches")
               directory))
-        (map strip-trailing-slash %load-path))))
+        %load-path)))
 
 ;; This procedure is used by Emacs-Guix up to 0.5.1.1, so keep it for now.
 ;; See <https://github.com/alezost/guix.el/issues/30>.

gnu/packages/accessibility.scm

@@ -51,7 +51,6 @@
   #:use-module (gnu packages libusb)
   #:use-module (gnu packages java)
   #:use-module (gnu packages python)
-  #:use-module (gnu packages python-build)
   #:use-module (gnu packages python-xyz)
   #:use-module (gnu packages tcl)
   #:use-module (gnu packages xml)
@@ -186,9 +185,7 @@ terminals.")
     (native-inputs
      (append
        (list clisp
-             ;; See: <https://bugzilla.redhat.com/show_bug.cgi?id=2231865>.
+             python-cython
-             python-cython-0
-             python-setuptools  ;remove with next update
              doxygen
              gettext-minimal)
        ;; icedtea doesn't build reliably on all architectures.

gnu/packages/acl.scm

@@ -37,6 +37,7 @@
   #:use-module (gnu packages)
   #:use-module (guix build-system gnu)
   #:use-module (guix build-system pyproject)
+  #:use-module (guix build-system python)
   #:use-module (guix utils))
 
 (define-public acl

gnu/packages/admin.scm

@@ -1,5 +1,5 @@
 ;;; GNU Guix --- Functional package management for GNU
-;;; Copyright © 2012-2026 Ludovic Courtès <ludo@gnu.org>
+;;; Copyright © 2012-2025 Ludovic Courtès <ludo@gnu.org>
 ;;; Copyright © 2013 Cyril Roelandt <tipecaml@gmail.com>
 ;;; Copyright © 2014, 2015, 2016, 2018, 2019, 2020 Mark H Weaver <mhw@netris.org>
 ;;; Copyright © 2014, 2015-2018, 2020-2023 Eric Bavier <bavier@posteo.net>
@@ -109,6 +109,7 @@
   #:use-module (guix build-system go)
   #:use-module (guix build-system meson)
   #:use-module (guix build-system perl)
+  #:use-module (guix build-system python)
   #:use-module (guix build-system pyproject)
   #:use-module (guix build-system qt)
   #:use-module (guix build-system ruby)
@@ -144,7 +145,7 @@
   #:use-module (gnu packages elf)
   #:use-module (gnu packages file)
   #:use-module (gnu packages file-systems)
-  #:use-module (gnu packages compiler-tools)
+  #:use-module (gnu packages flex)
   #:use-module (gnu packages fonts)
   #:use-module (gnu packages freedesktop)
   #:use-module (gnu packages gawk)
@@ -743,7 +744,7 @@ manager.")
 (define-public swineherd
   (package
     (name "swineherd")
-    (version "0.0.5")
+    (version "0.0.4")
     (source (origin
               (method git-fetch)
               (uri (git-reference
@@ -752,7 +753,7 @@ manager.")
               (file-name (git-file-name name version))
               (sha256
                (base32
-                "1w3fvkdmqvbzqfx3xindm8qgam54wja46isgwasaiqmmhnla7p52"))))
+                "0iij1pl0y410k1dk1ifa56dxmjb1blv0y3k5rxy794gwg6w6c480"))))
     (build-system gnu-build-system)
     (arguments
      '(#:configure-flags '("--localstatedir=/var")
@@ -766,7 +767,7 @@ manager.")
            guile-netlink
            guile-3.0
            guix
-           shepherd-1.0))
+           shepherd-0.10))
     (home-page "https://github.com/BIMSBbioinfo/swineherd")
     (synopsis "System container manager")
     (description
@@ -1084,7 +1085,7 @@ console.")
 (define-public btop
   (package
     (name "btop")
-    (version "1.4.7")
+    (version "1.4.6")
     (source (origin
               (method git-fetch)
               (uri (git-reference
@@ -1093,7 +1094,7 @@ console.")
               (file-name (git-file-name name version))
               (sha256
                (base32
-                "0d3cr5l6gpcwhxgnrizny5b5kg6fys2hy9a58bc68w4n2hc040fy"))))
+                "1nj58dbv3c0rj8fngldkyrmdmacmjnbg8ch1c07ik97kqnnzd3l7"))))
     (build-system gnu-build-system)
     (native-inputs (list lowdown))
     (arguments
@@ -1157,7 +1158,7 @@ on memory usage on GNU/Linux systems.")
 (define-public htop
   (package
     (name "htop")
-    (version "3.5.1")
+    (version "3.4.1")
     (source
      (origin
        (method git-fetch)
@@ -1165,7 +1166,7 @@ on memory usage on GNU/Linux systems.")
              (url "https://github.com/htop-dev/htop")
              (commit version)))
        (sha256
-        (base32 "187gyj081n6qsidll5wdri3jkr4m2i4m461z3xv03y342f5yj3lv"))
+        (base32 "058y4a4mvx9m179dyr4wi8mlm6i4ybywshadaj4cvfn9fv0r0nkx"))
        (file-name (git-file-name name version))))
     (build-system gnu-build-system)
     (arguments
@@ -1308,8 +1309,7 @@ re-executing them as necessary.")
                                   version ".tar.gz"))
               (sha256
                (base32
-                "11n01vsd51r7qraaaylhhx04hq4s6vcq0896zkz0yp1wvqfbwmm1"))
+                "11n01vsd51r7qraaaylhhx04hq4s6vcq0896zkz0yp1wvqfbwmm1"))))
-              (patches (search-patches "inetutils-drop-test.patch"))))
     (build-system gnu-build-system)
     (arguments
      (list
@@ -1971,7 +1971,7 @@ maintenance releases.")
 (define-public dhcpcd
   (package
     (name "dhcpcd")
-    (version "10.3.2")
+    (version "10.3.0")
     (source
      (origin
        (method git-fetch)
@@ -1980,7 +1980,7 @@ maintenance releases.")
              (commit (string-append "v" version))))
        (file-name (git-file-name name version))
        (sha256
-        (base32 "1z5rpi0n2vwhkh3c4d0dxwp38fl18br58jpy7kzh97gzg3gpk5dl"))))
+        (base32 "058k8wbzbjb6mm6qklv40z1y4k6sdb4ysap1xk6pny1m1f9xkdax"))))
     (inputs (list bash-minimal coreutils-minimal eudev sed))
     (build-system gnu-build-system)
     (arguments
@@ -2979,7 +2979,7 @@ system is under heavy load.")
 (define-public stress-ng
   (package
     (name "stress-ng")
-    (version "0.21.01")
+    (version "0.20.01")
     (source
      (origin
        (method git-fetch)
@@ -2988,7 +2988,7 @@ system is under heavy load.")
              (commit (string-append "V" version))))
        (file-name (git-file-name name version))
        (sha256
-        (base32 "11w8xjm53lgnxfvg286lavqjh0il3bfr1fsgyk915167r4vlabqq"))))
+        (base32 "1jkinrxh9ppv7xfii9xlisnd2679wnj4ljq12h8y0nvwrm8fkm0b"))))
     (build-system gnu-build-system)
     (arguments
      ;; XXX The test suite seems to cause instability on the VisionFive 2
@@ -3405,7 +3405,7 @@ provides the following commands:
      ;; variable in the tests/import/cpan.scm test.
      (list (search-path-specification
             (variable "GUIX_PYTHONPATH")
-            (files (list "lib/python3.12/site-packages")))))
+            (files (list "lib/python3.11/site-packages")))))
     (home-page "https://www.ansible.com/")
     (synopsis "Radically simple IT automation")
     (description "Ansible aims to be a radically simple IT automation system.
@@ -3423,7 +3423,7 @@ modules and plugins that extend Ansible.")
 (define-public debops
   (package
     (name "debops")
-    (version "3.3.0")
+    (version "3.2.5")
     (source
      (origin
        (method git-fetch)
@@ -3432,7 +3432,7 @@ modules and plugins that extend Ansible.")
              (commit (string-append "v" version))))
        (file-name (git-file-name name version))
        (sha256
-        (base32 "0z6wck5kax5h2bjv1vw8pbd7fdcdhx87bj9fakh3h0rar9d2qksj"))
+        (base32 "15wfhha2b315i15l40j3sylyvs3mdrfw5awzq4cix51l5jppx8z5"))
        (patches
         (search-patches "debops-setup-py-avoid-git.patch"))))
     (build-system pyproject-build-system)
@@ -3441,7 +3441,7 @@ modules and plugins that extend Ansible.")
      (list ansible
            bash-minimal
            encfs
-           fuse
+           fuse-2
            util-linux ;; for umount
            findutils
            git
@@ -3454,8 +3454,8 @@ modules and plugins that extend Ansible.")
            python-future
            python-gitpython
            python-jinja2
-           python-pyxdg
            python-pyyaml
+           python-pyxdg
            python-toml))
     (arguments
      (list
@@ -3470,7 +3470,7 @@ modules and plugins that extend Ansible.")
                          `("PATH" ":" prefix
                            ,(map dirname
                                  (map (cut search-input-file inputs <>)
-                                      (list ;; "bin/ansible"    ;see above
+                                      (list "bin/ansible"
                                             "bin/gpg"
                                             "bin/git"
                                             "bin/git-crypt"
@@ -3750,68 +3750,59 @@ summarizes network bandwidth by process and remote host.")
 (define-public munge
   (package
     (name "munge")
-    (version "0.5.18")
+    (version "0.5.14")
     (source (origin
-              (method git-fetch)
+              (method url-fetch)
-              (uri (git-reference
+              (uri (string-append "https://github.com/dun/munge/releases/"
-                     (url "https://github.com/dun/munge")
+                                  "download/munge-" version "/munge-"
-                     (commit (string-append "munge-" version))))
+                                  version ".tar.xz"))
-              (file-name (git-file-name name version))
               (sha256
                (base32
-                "1b7gm680dlvmgvj9vxy7n0cqmnv1rl9n4563vasxdxx54f78j30s"))
+                "0h06sghb4rqvv1ywyd6mzsmbcgh712v6ygrff0gzm440y4ca41k6"))
               (modules '((guix build utils)))
               (snippet
-               ;; Don't insist on write access to /var.
+               '(begin
-               #~(substitute* "src/etc/Makefile.am"
+                  ;; Don't insist on write access to /var.
-                   (("\\$\\(MKDIR_P\\) .*(local|run)statedir.*" all)
+                  (substitute* "src/etc/Makefile.in"
-                    (string-append ": " all))))))
+                    (("\\$\\(INSTALL\\)(.*)localstatedir" _ middle)
+                     (string-append "-$(INSTALL)" middle "localstatedir"))
+                    (("\\$\\(MKDIR_P\\) .*(local|run)statedir.*")
+                     ""))
+                  #t))))
     (inputs
      (list openssl libgcrypt))
-    (native-inputs
-     (list autoconf
-           automake
-           libtool
-           procps))                               ;for tests
     (build-system gnu-build-system)
     (arguments
-     (list #:configure-flags
+     `(#:configure-flags
-           #~(list "--localstatedir=/var"
+       (list "--localstatedir=/var"
-                   "--disable-static"
+             (string-append "--with-pkgconfigdir="
-                   #$@(if (%current-target-system)
+                            (assoc-ref %outputs "out") "/lib/pkgconfig")
-                          ;; Assume yes on pipes when cross compiling.
+             (string-append "--with-libgcrypt-prefix="
-                          `("ac_cv_file__dev_spx=yes"
+                            (assoc-ref %build-inputs "libgcrypt"))
-                            "x_ac_cv_check_fifo_recvfd=yes")
+             ,@(if (%current-target-system)
-                          '())
+                 ;; Assume yes on pipes when cross compiling.
-
+                 `("ac_cv_file__dev_spx=yes"
-                   ;; The '.pc' file is not installed when omitting this flag.
+                   "x_ac_cv_check_fifo_recvfd=yes")
-                   (string-append "--with-pkgconfigdir="
+                 '()))
-                                  #$output "/lib/pkgconfig"))
+       #:phases
-           #:phases
+       (modify-phases %standard-phases
-           #~(modify-phases %standard-phases
+         ;; XXX Many test series fail.  Some might be fixable, others do no-no
-               (add-before 'bootstrap 'pre-bootstrap
+         ;; things like invoking ‘sudo’.
-                 (lambda _
+         (add-after 'unpack 'skip-failing-tests
-                   (for-each patch-shebang (find-files "build-aux"))))
+           (lambda _
-               (add-after 'unpack 'skip-failing-tests
+             (for-each (lambda (test)
-                 (lambda _
+                         (substitute* "t/Makefile.in"
-                   ;; Pass '--force' to 'munged'; without it, it fails with "Socket
+                           (((string-append test "\\.t ")) "")))
-                   ;; is inaccessible" due to the build directory not being
+                       (list "0100-munged-lock"
-                   ;; world-readable.
+                             "0010-basic"
-                   (substitute* "tests/sharness.d/03-munged.sh"
+                             "0011-munged-cmdline"
-                     (("--group-update-time=-1" all)
+                             "0012-munge-cmdline"
-                      (string-append all " --force")))
+                             "0013-unmunge-cmdline"
-
+                             "0101-munged-security-socket"
-                   ;; The tests below invoke 'sudo' or have special expectations
+                             "0102-munged-security-keyfile"
-                   ;; about network interfaces.
+                             "0103-munged-security-logfile"
-                   (for-each (lambda (test)
+                             "0110-munged-origin-addr"))
-                               (substitute* "tests/Makefile.am"
+             #t)))))
-                                 (((string-append test "\\.t "))
-                                  "")))
-                             (list "0100-munged-lock"
-                                   "0101-munged-security-socket"
-                                   "0102-munged-security-keyfile"
-                                   "0103-munged-security-logfile"
-                                   "0110-munged-origin-addr")))))))
     (home-page "https://dun.github.io/munge/")
     (synopsis "Cluster computing authentication service")
     (description
@@ -3926,18 +3917,6 @@ rules is done with the @code{auditctl} utility.")
                 (wrap-program (string-append ndiff "/bin/ndiff")
                   `("GUIX_PYTHONPATH" prefix
                     (,(python-path ndiff)))))))
-          (add-before 'check 'fix-tests-for-python-3.12
-            (lambda _
-              (substitute* "ndiff/ndifftest.py"
-                (("import imp")
-                 "import importlib.util")
-                (("ndiff = imp\\.load_source\\(\"ndiff\", \"ndiff\\.py\"\\)")
-                 (string-join
-                  '("spec = \
-importlib.util.spec_from_file_location(\"ndiff\", \"ndiff.py\")"
-                    "ndiff = importlib.util.module_from_spec(spec)"
-                    "spec.loader.exec_module(ndiff)")
-                  "\n")))))
           ;; These are the tests that do not require network access.
           (replace 'check
             (lambda* (#:key tests? #:allow-other-keys)
@@ -4067,59 +4046,51 @@ plug-in architecture to allow monitoring other system metrics.")
     (license license:gpl2+)))
 
 (define-public thefuck
-  ;; Latest release, 3.32, is not compatible with Python 3.12.
+  (package
-  (let ((revision "0")
+    (name "thefuck")
-        (commit "c7e7e1d884d3bb241ea6448f72a989434c2a35ec"))
+    (version "3.32")
-    (package
+    (source
-      (name "thefuck")
+     (origin
-      (version (git-version "3.32" revision commit))
+       (method git-fetch)
-      (source
+       (uri (git-reference
-       (origin
+             (url "https://github.com/nvbn/thefuck")
-         (method git-fetch)
+             (commit version)))
-         (uri (git-reference
+       (file-name (git-file-name name version))
-                (url "https://github.com/nvbn/thefuck")
+       (sha256
-                (commit commit)))
+        (base32 "18ipa1bm6q1n5drbi8i65726hhqhl1g41390lfqrc11hkbvv443d"))
-         (file-name (git-file-name name version))
+       (patches (search-patches "thefuck-test-environ.patch"
-         (sha256
+                                "thefuck-remove-broken-tests.patch"))))
-          (base32 "1l3i2cpdf3vznpbzqw7b18l23xikqs7andx6yzqvm5415snaqg06"))
+    (build-system pyproject-build-system)
-         (patches (search-patches "thefuck-test-environ.patch"))))
+    (arguments
-      (build-system pyproject-build-system)
+     (list
-      (arguments
+      #:phases
-       (list
+      #~(modify-phases %standard-phases
-        #:test-flags
+          (add-before 'check 'pre-check
-        #~(list
+            (lambda _
-           "--deselect=tests/test_utils.py::TestGetValidHistoryWithoutCurrent"
+              ;; Tests look for installed package
-           "--ignore=tests/functional/conftest.py")
+              ;; Some tests need write access to $HOME.
-        #:phases
+              (setenv "HOME" "/tmp")
-        #~(modify-phases %standard-phases
+              ;; Even with that, this function tries to mkdir /.config.
-            (add-before 'check 'pre-check
+              (substitute* "tests/test_utils.py"
-              (lambda _
+                (("settings\\.init\\(\\)") "")))))))
-                ;; ModuleNotFoundError: No module named 'pytest_docker_pexpect'
+    (native-inputs
-                (delete-file "tests/functional/conftest.py")
+     (list go
-                ;; Tests look for installed package
+           python-mock
-                ;; Some tests need write access to $HOME.
+           python-pytest-8
-                (setenv "HOME" "/tmp")
+           python-pytest-mock
-                ;; Even with that, this function tries to mkdir /.config.
+           python-setuptools
-                (substitute* "tests/test_utils.py"
+           python-wheel))
-                  (("settings\\.init\\(\\)") "")))))))
+    (inputs
-      (native-inputs
+     (list python-colorama
-       (list go
+           python-decorator
-             python-mock
+           python-psutil
-             ;; Uses test markers that are incompatible with pytest 9.
+           python-pyte))
-             python-pytest-8
+    (home-page "https://github.com/nvbn/thefuck")
-             python-pytest-mock
+    (synopsis "Correct mistyped console command")
-             python-setuptools))
+    (description
-      (inputs
+     "The Fuck tries to match a rule for a previous, mistyped command, creates
-       (list python-colorama
-             python-decorator
-             python-psutil
-             python-pyte))
-      (home-page "https://github.com/nvbn/thefuck")
-      (synopsis "Correct mistyped console command")
-      (description
-       "The Fuck tries to match a rule for a previous, mistyped command, creates
 a new command using the matched rule, and runs it.")
-      (license license:x11))))
+    (license license:x11)))
 
 (define-public di
   (package
@@ -4434,7 +4405,7 @@ buffers.")
 (define-public igt-gpu-tools
   (package
     (name "igt-gpu-tools")
-    (version "2.4")
+    (version "2.3")
     (source
      (origin
        (method git-fetch)
@@ -4443,7 +4414,7 @@ buffers.")
              (commit (string-append "v" version))))
        (file-name (git-file-name name version))
        (sha256
-        (base32 "0ijvfa5wamihzbl8l29sc27ml0kmgzlld83jm5mln6bb4bvny4gs"))))
+        (base32 "1vyqrsvxraib98r4i6cjmxq7nis480s2ns95v78dscygcci42i8a"))))
     (build-system meson-build-system)
     (arguments
      `(#:tests? #f              ; many of the tests try to load kernel modules
@@ -4461,7 +4432,6 @@ buffers.")
            libdrm
            libpciaccess
            libunwind
-           pciutils
            procps
            python))
     (native-inputs
@@ -4731,7 +4701,7 @@ information tool.")
 (define-public fastfetch-minimal
   (package
     (name "fastfetch-minimal")
-    (version "2.63.1")
+    (version "2.60.0")
     (source
      (origin
        (method git-fetch)
@@ -4740,7 +4710,7 @@ information tool.")
              (commit version)))
        (file-name (git-file-name name version))
        (sha256
-        (base32 "13a5maf8jxyga5bga96s40binqp2i54pjlipsnqgfj85q01yzkg9"))
+        (base32 "089577qgxd63zqzd00fz381bfpmj6pwlmy2zfan9r6gbm1jvj4i8"))
        (modules '((guix build utils)))
        (snippet '(begin
                    (delete-file-recursively "src/3rdparty")
@@ -7072,7 +7042,7 @@ network, which causes enabled computers to power on.")
 (define-public witr
   (package
     (name "witr")
-    (version "0.3.2")
+    (version "0.1.7")
     (source
      (origin
        (method git-fetch)
@@ -7081,7 +7051,7 @@ network, which causes enabled computers to power on.")
               (commit (string-append "v" version))))
        (file-name (git-file-name name version))
        (sha256
-        (base32 "06vxrgd0j2v6s4snmyviwpp66hm5zai7xca9318inhyg4jw3ngg5"))))
+        (base32 "18xx01lxd5j019gy9jmpms3awv4snlr028w01bfkyfid6hlwxbq2"))))
     (build-system go-build-system)
     (arguments
      (list
@@ -7199,67 +7169,6 @@ stored in an SQL database.")
 (connects via USB OTG).")
     (license license:expat)))
 
-(define-public yoctofetch
-  (package
-    (name "yoctofetch")
-    (version "2.0.0")
-    (source
-     (origin
-       (method git-fetch)
-       (uri (git-reference
-             (url "https://codeberg.org/Phosphenius/yoctofetch.git")
-             (commit (string-append "v" version))))
-       (file-name (git-file-name name version))
-       (sha256
-        (base32 "0smkaydv74p2231gafibvqbwsy469w56hya8gz8wq0gw7m2l7zh3"))))
-    ; Support for other platforms not available per upstream:
-    ; https://codeberg.org/Phosphenius/yoctofetch#supported-platforms
-    (supported-systems '("x86_64-linux" "aarch64-linux"))
-    (build-system gnu-build-system)
-    (arguments
-     (list
-      #:tests? #f)) ; No tests available.
-    (home-page "https://codeberg.org/Phosphenius/yoctofetch")
-    (synopsis "Fast and low footprint system fetch tool for the Linux UAPI")
-    (description
-     "This package provides a system fetch tool, similar to
-@command{neofetch}, @command{fastfetch}, etc.  It is lightweight and
-has a focus on performance.  It can be used as a greeter by starting
-it from @file{~/.bashrc} for example.")
-    (license license:agpl3+)))
-
-(define-public zeptofetch
-  (package
-    (name "zeptofetch")
-    (version "1.21")
-    (source
-     (origin
-       (method git-fetch)
-       (uri (git-reference
-             (url "https://gitlab.archlinux.org/gurov/zeptofetch")
-             (commit (string-append "v" version))))
-       (file-name (git-file-name name version))
-       (sha256
-        (base32 "1f1dm9nrp0z0prqy90csrkbk98ixp0jx76ax473qb0qsbb7ys4g7"))))
-    (build-system gnu-build-system)
-    (arguments
-     (list
-      #:tests? #f ; No tests available.
-      #:make-flags
-      #~(list (string-append "PREFIX="
-                             #$output))
-      #:phases
-      #~(modify-phases %standard-phases
-          (delete 'configure)))) ; No configure script.
-    (home-page "https://gitlab.archlinux.org/gurov/zeptofetch")
-    (synopsis
-     "Fast, minimal system information tool for Linux.")
-    (description
-     "This package provides a system fetch tool, similar to
-@command{neofetch}, @command{fastfetch}, etc.  It is lightweight and
-has a focus on performance.")
-    (license license:gpl3+)))
-
 (define-public zzz
   (package
     (name "zzz")

gnu/packages/aidc.scm

@@ -117,7 +117,7 @@ Features:
 (define-public python-zbarlight
   (package
     (name "python-zbarlight")
-    (version "4.0")
+    (version "3.0")
     (source
      (origin
        (method git-fetch)
@@ -126,7 +126,7 @@ Features:
              (commit version)))
        (file-name (git-file-name name version))
        (sha256
-        (base32 "1q1nfc7g7bl9y63fwvnq1fcgqk79inc2hhw3ilvyw0nk0g74v8cm"))))
+        (base32 "1radfpfhfhkx3xnz01bqr5l9pl2zv70zis6l2kw1gwqbfw65r6w6"))))
     (build-system pyproject-build-system)
     (propagated-inputs (list python-pillow))
     (inputs (list zbar))

gnu/packages/algebra.scm

@@ -52,7 +52,7 @@
   #:use-module (gnu packages cpp)
   #:use-module (gnu packages curl)
   #:use-module (gnu packages documentation)
-  #:use-module (gnu packages compiler-tools)
+  #:use-module (gnu packages flex)
   #:use-module (gnu packages fltk)
   #:use-module (gnu packages fontutils)
   #:use-module (gnu packages gcc)
@@ -88,6 +88,7 @@
   #:use-module (guix build-system gnu)
   #:use-module (guix build-system cmake)
   #:use-module (guix build-system pyproject)
+  #:use-module ((guix build-system python) #:select (pypi-uri))
   #:use-module (guix build-system r)
   #:use-module (guix download)
   #:use-module (guix gexp)
@@ -457,7 +458,7 @@ precision.")
     (inputs
      ;; TODO: Unbundle "libmicropython.a".
      (list ao
-           fltk
+           fltk-1.3
            glpk
            gmp
            gsl

gnu/packages/android.scm

@@ -41,6 +41,7 @@
   #:use-module (guix build-system emacs)
   #:use-module (guix build-system gnu)
   #:use-module (guix build-system go)
+  #:use-module (guix build-system python)
   #:use-module (guix build-system pyproject)
   #:use-module (guix build-system qt)
   #:use-module (guix build-system trivial)
@@ -1229,35 +1230,28 @@ main repository.")
 (define-public fdroidcl
   (package
     (name "fdroidcl")
-    (version "0.8.1")
+    (version "0.7.0")
-    (source
+    (source (origin
-     (origin
+              (method git-fetch)
-       (method git-fetch)
+              (uri (git-reference
-       (uri (git-reference
+                    (url "https://github.com/mvdan/fdroidcl")
-              (url "https://github.com/Hoverth/fdroidcl")
+                    (commit (string-append "v" version))))
-              (commit (string-append "v" version))))
+              (file-name (git-file-name name version))
-       (file-name (git-file-name name version))
+              (sha256
-       (sha256
+               (base32
-        (base32 "1bflahcsjarv4v6r61knl5gc5iydh1lwvqjgffhxr4pis4qfsqsa"))
+                "1s3fszlyyab9gbdrg52zcbafsb1mgb770skg7b3gj7f3pzfnra5n"))))
-       ;; XXX: Reported upstream.
-       ;; See: <https://github.com/Hoverth/fdroidcl/pull/92>.
-       (patches (search-patches "fdroidcl-fix-tests.patch"))))
     (build-system go-build-system)
     (arguments
-     (list
+     `(#:import-path "mvdan.cc/fdroidcl"
-      #:install-source? #f
+       #:tests? #f                      ;requires internet access
-      #:import-path "mvdan.cc/fdroidcl"))
+       #:install-source? #f))
-    (inputs
+    (inputs (list go-github-com-kr-pretty go-github-com-schollz-progressbar-v3))
-     (list go-github-com-kr-pretty
-           go-github-com-pelletier-go-toml-v2
-           go-github-com-rogpeppe-go-internal
-           go-github-com-schollz-progressbar-v3))
-    (home-page "https://github.com/Hoverth/fdroidcl")
     (synopsis "F-Droid desktop client")
     (description
      "While the Android client integrates with the system with regular update
 checks and notifications, this is a simple command line client that talks to
 connected devices via ADB.")
+    (home-page "https://github.com/mvdan/fdroidcl")
     (license license:bsd-3)))
 
 (define-public emacs-fdroid

gnu/packages/animation.scm

@@ -238,12 +238,12 @@ contains the graphical user interface for synfig.")
              (when tests?
                (invoke "./tests")))))))
     (native-inputs
-     (cons* gettext-minimal
+     (list gettext-minimal
-            `(,glib "bin")
+           `(,glib "bin")
-            perl
+           nasm
-            pkg-config
+           perl
-            python-wrapper
+           pkg-config
-            (maybe-nasm)))
+           python-wrapper))
     (inputs
      (list cairo
            curl

gnu/packages/apparmor.scm

@@ -22,7 +22,7 @@
   #:use-module (gnu packages base)
   #:use-module (gnu packages bison)
   #:use-module (gnu packages dejagnu)
-  #:use-module (gnu packages compiler-tools)
+  #:use-module (gnu packages flex)
   #:use-module (gnu packages gawk)
   #:use-module (gnu packages gettext)
   #:use-module (gnu packages linux)
@@ -180,7 +180,7 @@ supported by Canonical since 2009.")
        (list libapparmor))
       ;; Python module `readline' needed
       (native-inputs
-       (list bison flex gettext-minimal perl python python-setuptools which))
+       (list bison flex gettext-minimal perl python which))
       (license license:gpl2))))
 
 (define-public pam-apparmor

gnu/packages/assembly.scm

@@ -2,7 +2,7 @@
 ;;; Copyright © 2016 Jan Nieuwenhuizen <janneke@gnu.org>
 ;;; Copyright © 2013, 2015 Ludovic Courtès <ludo@gnu.org>
 ;;; Copyright © 2013 Andreas Enge <andreas@enge.fr>
-;;; Copyright © 2016, 2020, 2021, 2025, 2026 Efraim Flashner <efraim@flashner.co.il>
+;;; Copyright © 2016, 2020, 2021, 2025 Efraim Flashner <efraim@flashner.co.il>
 ;;; Copyright © 2017–2022 Tobias Geerinckx-Rice <me@tobias.gr>
 ;;; Copyright © 2019 Guy Fleury Iteriteka <hoonandon@gmail.com>
 ;;; Copyright © 2019, 2022, 2024 Andy Tai <atai@atai.org>
@@ -43,14 +43,13 @@
   #:use-module ((guix licenses) #:prefix license:)
   #:use-module (guix packages)
   #:use-module (guix gexp)
-  #:use-module (guix utils)
   #:use-module (gnu packages)
   #:use-module (gnu packages admin)
   #:use-module (gnu packages autotools)
   #:use-module (gnu packages base)
   #:use-module (gnu packages bison)
   #:use-module (gnu packages compression)
-  #:use-module (gnu packages compiler-tools)
+  #:use-module (gnu packages flex)
   #:use-module (gnu packages gettext)
   #:use-module (gnu packages image)
   #:use-module (gnu packages linux)
@@ -249,16 +248,6 @@ complex.  It supports all currently known x86 architectural extensions, and
 has strong support for macros.")
     (license license:bsd-2)))
 
-(define* (maybe-nasm #:optional
-                     (system (or (%current-target-system)
-                                 (%current-system))))
-  ;; For some packages nasm is only needed when compiling to/for x86/x86_64.
-  (if (target-x86? system)
-      (list nasm)
-      '()))
-
-(export maybe-nasm)
-
 (define-public yasm
   (package
     (name "yasm")

gnu/packages/audio.scm

@@ -51,7 +51,7 @@
 ;;; Copyright © 2024 Nikita Domnitskii <nikita@domnitskii.me>
 ;;; Copyright © 2024 Roman Scherer <roman@burningswell.com>
 ;;; Copyright © 2024 Sughosha <sughosha@disroot.org>
-;;; Copyright © 2025, 2026 Junker <dk@junkeria.club>
+;;; Copyright © 2025 Junker <dk@junkeria.club>
 ;;; Copyright © 2025 Sughosha <sughosha@disroot.org>
 ;;; Copyright © 2025 Andrew Wong <wongandj@icloud.com>
 ;;; Copyright © 2025 Kjartan Oli Agustsson <kjartanoli@outlook.com>
@@ -63,7 +63,6 @@
 ;;; Copyright © 2026 Noé Lopez <noelopez@free.fr>
 ;;; Copyright © 2026 Carlos Durán Domínguez <wurt@wurt.eu>
 ;;; Copyright © 2026 Daniel Martins <email@danielfm.me>
-;;; Copyright © 2026 Artyom V. Poptsov <poptsov.artyom@gmail.com>
 ;;;
 ;;; This file is part of GNU Guix.
 ;;;
@@ -103,7 +102,7 @@
   #:use-module (gnu packages elf)
   #:use-module (gnu packages emacs)
   #:use-module (gnu packages file)
-  #:use-module (gnu packages compiler-tools)
+  #:use-module (gnu packages flex)
   #:use-module (gnu packages fltk)
   #:use-module (gnu packages fontutils)
   #:use-module (gnu packages freedesktop)
@@ -128,7 +127,6 @@
   #:use-module (gnu packages linphone)
   #:use-module (gnu packages linux)
   #:use-module (gnu packages llvm)
-  #:use-module (gnu packages logging)
   #:use-module (gnu packages machine-learning)
   #:use-module (gnu packages man)
   #:use-module (gnu packages maths)
@@ -137,6 +135,7 @@
   #:use-module (gnu packages music)
   #:use-module (gnu packages ncurses)
   #:use-module (gnu packages networking)
+  #:use-module (gnu packages ninja)
   #:use-module (gnu packages onc-rpc)
   #:use-module (gnu packages oneapi)
   #:use-module (gnu packages perl)
@@ -145,7 +144,6 @@
   #:use-module (gnu packages pretty-print)
   #:use-module (gnu packages python)
   #:use-module (gnu packages python-build)
-  #:use-module (gnu packages python-check)
   #:use-module (gnu packages python-crypto)
   #:use-module (gnu packages python-science)
   #:use-module (gnu packages python-web)
@@ -181,6 +179,7 @@
   #:use-module (guix build-system glib-or-gtk)
   #:use-module (guix build-system gnu)
   #:use-module (guix build-system meson)
+  #:use-module (guix build-system python)
   #:use-module (guix build-system pyproject)
   #:use-module (guix build-system qt)
   #:use-module (guix build-system trivial)
@@ -195,45 +194,6 @@
   #:use-module (srfi srfi-26)
   #:use-module (ice-9 match))
 
-(define-public adplug
-  (package
-    (name "adplug")
-    (version "2.4")
-    (source (origin
-              (method git-fetch)
-              (uri (git-reference
-                    (url "https://github.com/adplug/adplug")
-                    (commit (string-append "adplug-" version))))
-              (file-name (git-file-name name version))
-              (sha256
-               (base32
-                "0l31ya42g3q7ry2m0y5djgjb9ax8ciy8jn86252vdjkjswwqgscd"))))
-    (build-system cmake-build-system)
-    (arguments
-     (list #:configure-flags
-           #~(list "-DBUILD_SHARED_LIBS=ON")
-           #:modules
-           '((guix build cmake-build-system)
-             (guix build utils)
-             (srfi srfi-26))                 ;for cute
-           #:phases
-           #~(modify-phases %standard-phases
-               (add-after 'install 'install-headers
-                 (lambda _
-                   (for-each (cute install-file <>
-                                  (string-append #$output "/include/adplug"))
-                             (find-files "../source/src" "\\.h$")))))))
-    (propagated-inputs
-     (list libbinio))
-    (home-page "https://adplug.github.io/")
-    (synopsis "AdLib sound player library")
-    (description
-     "AdPlug is a hardware independent AdLib sound player library, mainly
-written in C++.  AdPlug plays sound data, originally created for the AdLib
-(OPL2/3) audio board, on top of an OPL2/3 emulator or by using the real
-hardware.  No OPL2/3 chips are required for playback.")
-    (license license:lgpl2.1+)))
-
 (define-public opensles
   (package
     (name "opensles")
@@ -820,8 +780,7 @@ Filter) modules follow the convention of 1V / Octave.")
                    "https://aubio.org/pub/aubio-" version ".tar.bz2"))
              (sha256
               (base32
-               "1npks71ljc48w6858l9bq30kaf5nph8z0v61jkfb70xb9np850nl"))
+               "1npks71ljc48w6858l9bq30kaf5nph8z0v61jkfb70xb9np850nl"))))
-             (patches (search-patches "aubio-waflib-python312-compat.patch"))))
     (build-system waf-build-system)
     (arguments
      (list
@@ -1251,7 +1210,7 @@ PulseAudio clients, featuring:
 (define-public ardour
   (package
     (name "ardour")
-    (version "9.2")
+    (version "9.1")
     (source (origin
               (method git-fetch)
               (uri (git-reference
@@ -1268,7 +1227,7 @@ PulseAudio clients, featuring:
 namespace ARDOUR { const char* revision = \"" version "\" ; const char* date = \"\"; }")))))
               (sha256
                (base32
-                "14s6cq3x7l7b682ah9k8cdr6plfirlgm882dc2nm51lxwl91zcfd"))
+                "00bramm8dq0ihr376n7l9rg0mjzxmzw6lxvsbsdlrdsimfwsy16p"))
               (file-name (git-file-name name version))))
     (build-system waf-build-system)
     (arguments
@@ -2135,17 +2094,7 @@ envelope follower, distortion effects, tape effects and more.")
 	        (base32
                  "01hnx4hhbz3ap3bw15s42q4q1mw1mhdjwygq4550wvjfg6k4ga8w"))))
       (build-system waf-build-system)
-      (arguments
+      (arguments (list #:tests? #false)) ;There are no tests.
-       (list
-        #:tests? #false ;There are no tests.
-        #:phases
-        '(modify-phases %standard-phases
-           (add-after 'unpack 'python3.12-compatibility
-             (lambda _
-               (substitute* "waflib/Context.py"
-                 (("imp.new_module") "types.ModuleType")
-                 (("import os, re, imp, sys")
-                  "import os, re, types, sys")))))))
       (inputs (list lv2))
       (native-inputs (list pkg-config))
       (home-page "https://git.drobilla.net/cgit.cgi/omins.lv2.git/")
@@ -3289,27 +3238,30 @@ synchronous execution of all clients, and low latency operation.")
   (package
     (inherit jack-1)
     (name "jack2")
-    ;; 1.9.22 does not compile with Python 3.12, use the latest commit instead.
+    (version "1.9.21")
-    (properties '((commit . "17959465a722225a36a8b612aed26764036f258e")
-                  (revision . "0")))
-    (version (git-version "1.9.22"
-                          (assoc-ref properties 'revision)
-                          (assoc-ref properties 'commit)))
     (source (origin
               (method git-fetch)
               (uri (git-reference
-                     (url "https://github.com/jackaudio/jack2")
+                    (url "https://github.com/jackaudio/jack2")
-                     (commit (assoc-ref properties 'commit))))
+                    (commit (string-append "v" version))))
               (file-name (git-file-name name version))
               (sha256
                (base32
-                "18dbjq9y8mcp27j9aaqdlg4976hrisr7b88lk84ck09gmzlwqalp"))))
+                "0sbrffmdbajvrk7iqvsvrnwnpvmicvbjyq3f52r6ashdsznsz03b"))))
     (build-system waf-build-system)
     (arguments
      `(#:tests? #f                      ; no check target
        #:configure-flags '("--dbus" "--alsa")
        #:phases
        (modify-phases %standard-phases
+         ;; Python 3.11 has removed the 'U' (universal newline) mode.  It has
+         ;; been the default since Python 3.3.
+         (add-after 'unpack 'python-compatibility
+           (lambda _
+             (substitute* '("waflib/Context.py"
+                            "waflib/ConfigSet.py")
+               (("m='rU'") "m='r'")
+               (("read\\('rU'") "read('r'"))))
          (add-before 'configure 'set-linkflags
            (lambda _
              ;; Ensure -lstdc++ is the tail of LDFLAGS or the simdtests.cpp
@@ -3335,7 +3287,7 @@ synchronous execution of all clients, and low latency operation.")
            expat
            libsamplerate
            opus
-           python-dbus
+           python-dbus-1.2
            readline))
     (native-inputs
      (list pkg-config))
@@ -3478,7 +3430,7 @@ from being able to mix multiple JACK audio streams.")
 (define-public pipemixer
   (package
     (name "pipemixer")
-    (version "0.5.0")
+    (version "0.4.1")
     (source
      (origin
       (method git-fetch)
@@ -3487,8 +3439,19 @@ from being able to mix multiple JACK audio streams.")
             (commit (string-append "v" version))))
       (file-name (git-file-name name version))
       (sha256
-       (base32 "104h2zdhqx5gdddnb7v7rhrflznh4v7d4g3s6vk2mxwf938zgm72"))))
+       (base32 "0fvnvr74q5khxlj5sylfnkblydmwgdbvj04mhdqw0zzmfqwignhd"))))
     (build-system meson-build-system)
+    (arguments
+     (list
+      #:phases
+      #~(modify-phases %standard-phases
+          (add-after 'unpack 'fix-pw-device
+            (lambda _
+              (substitute* "src/pw/device.c"
+                ;; TODO: Report upstream:
+                ;; ../source/src/pw/device.c:328:80: error: expected
+                ;; ‘;’ before ‘{’ token
+                (("iter\\) \\{") "iter); {")))))))
     (native-inputs
      (list pkg-config))
     (inputs
@@ -3888,58 +3851,6 @@ provided by Pipewire.")
 cross-platform audio input/output stream library.")
     (license license:expat)))
 
-(define-public python-pyroomacoustics
-  (package
-    (name "python-pyroomacoustics")
-    (version "0.10.0")
-    (source
-     (origin
-       (method git-fetch)
-       (uri (git-reference
-             (url "https://github.com/LCAV/pyroomacoustics")
-             (commit (string-append "v" version))))
-       (file-name (git-file-name name version))
-       (sha256
-        (base32 "0546506lg93nrybvilc4wgrgvn317w9zxv2jwikhpfy1i0qyrnkk"))))
-    (build-system pyproject-build-system)
-    (arguments
-     (list
-      #:test-flags
-      #~(list
-         ;; Want to download data from the internet:
-         "--ignore"
-         "pyroomacoustics/directivities/tests/test_sofa_directivities.py"
-         "--ignore"
-         "pyroomacoustics/datasets/tests/test_download_uncompress.py"
-         ;; May fail because of slight numerical imprecision.
-         "--ignore"
-         "pyroomacoustics/experimental/tests/test_measure_rt60.py")
-      #:phases
-      #~(modify-phases %standard-phases
-          (add-before 'build 'set-extra-include-paths
-            (lambda* (#:key inputs #:allow-other-keys)
-              (setenv "CPLUS_INCLUDE_PATH"
-                      (string-append
-                       (search-input-directory inputs "include/eigen3")
-                       ":"
-                       (or (getenv "CPLUS_INCLUDE_PATH") ""))))))))
-    (propagated-inputs (list python-scipy))
-    (native-inputs (list eigen
-                         pybind11
-                         python-cython
-                         python-matplotlib
-                         python-numpy
-                         python-pytest
-                         python-setuptools
-                         python-sofa))
-    (inputs (list nanoflann))
-    (home-page "https://github.com/LCAV/pyroomacoustics")
-    (synopsis "Python library for room acoustics")
-    (description "@code{pyroomacoustics} is a framework for simulating the
-acustic behaviour of rooms, such as computing the impulse response using
-different simulation methods.")
-    (license license:expat)))
-
 (define-public python-pulsectl
   (package
     (name "python-pulsectl")
@@ -4044,40 +3955,6 @@ to send and receive OSC messages using a nice and simple Python API.  Also
 included are the command line utilities @code{send_osc} and @code{dump_osc}.")
     (license license:lgpl2.1+)))
 
-(define-public python-sofa
-  (package
-    (name "python-sofa")
-    (version "0.2.0")
-    (source
-     (origin
-       (method git-fetch)
-       (uri (git-reference
-             (url "https://github.com/spatialaudio/python-sofa/")
-             (commit (string-append "v" version))))
-       (file-name (git-file-name name version))
-       (sha256
-        (base32 "0n6mdck2dawfm6napqhhxi8gjyvs6121pblcr7zjl37a8ldqvg29"))))
-    (build-system pyproject-build-system)
-    (arguments
-     (list
-      #:tests? #f ;No tests
-      #:phases
-      #~(modify-phases %standard-phases
-          (add-after 'unpack 'remove-wrong-dependency
-            (lambda _
-              (substitute* "setup.py"
-                (("'datetime'")
-                 "")))))))
-    (propagated-inputs (list python-netcdf4 python-numpy python-scipy))
-    (native-inputs (list python-setuptools))
-    (home-page "https://github.com/spatialaudio/python-sofa/")
-    (synopsis
-     "Python @acronym{Spatially Oriented Format for Acoustics, SOFA} API")
-    (description
-     "Python API for @acronym{Spatially Oriented Format for Acoustics, SOFA} files
-as specified in @url{https://www.sofaconventions.org, SOFA conventions}.")
-    (license license:expat)))
-
 (define-public python-soundfile
   (package
     (name "python-soundfile")
@@ -4213,7 +4090,9 @@ one-dimensional sample-rate conversion library.")
                  (string-append "'" #$(this-package-input "libsndfile")
                                 "/lib/libsndfile"))))))))
     (native-inputs
-     (list python-pytest python-setuptools))
+     (list python-pytest
+           python-pytest-cov
+           python-setuptools))
     (inputs
      (list libsndfile
            portaudio))
@@ -4586,33 +4465,6 @@ This includes device enumeration and initialization, file loading, and
 streaming.")
     (license license:expat)))
 
-(define-public wp-notifyd
-  (package
-    (name "wp-notifyd")
-    (version "1.1.0")
-    (source
-     (origin
-       (method git-fetch)
-       (uri (git-reference
-              (url "https://github.com/LDAP/wp-notifyd")
-              (commit version)))
-       (file-name (git-file-name name version))
-       (sha256
-        (base32 "1nkndz0li15maf0dc9x631p0dr8085wzz5358552wljv7chywrza"))))
-    (build-system meson-build-system)
-    (arguments
-     (list #:tests? #f)) ;there are no tests
-    (inputs (list libnotify
-                  wireplumber-minimal
-                  pipewire
-                  spdlog))
-    (native-inputs (list pkg-config))
-    (home-page "https://github.com/LDAP/wp-notifyd")
-    (synopsis "Notification daemon for Wireplumber")
-    (description "@command{wp-notifyd} is a lightweight notification daemon for
-@dfn{WirePlumber} (the session and policy manager for PipeWire).")
-    (license license:expat)))
-
 (define-public pa-notify
   (package
     (name "pa-notify")
@@ -5017,42 +4869,6 @@ using Guix System.")
     ;; GNU Library (not Lesser) General Public License.
     (license license:lgpl2.0+)))
 
-(define-public hiir
-  (let ((commit "4a9a1e67fa6f8ce7688e1c0c8a2b017cecd206a3")
-        (revision "0"))
-    (package
-      (name "hiir")
-      (version (git-version "0" revision commit))
-      (source
-       (origin
-         (method git-fetch)
-         (uri (git-reference
-               (url "https://github.com/LostRobotMusic/hiir")
-               (commit commit)))
-         (file-name (git-file-name name version))
-         (sha256
-          (base32 "1wzlg0di768mzcik6fij4pd6dnpmbw8q236h478c057d10qfp44g"))))
-      (build-system copy-build-system)
-      (arguments
-       (list
-        #:install-plan
-        #~`(("." "/include/hiir"))))
-      (home-page "https://github.com/LostRobotMusic/hiir")
-      (synopsis "Header-only version of Laurent de Soras's HIIR 1.40 library")
-      (description
-       "This package provides a header-only version of the
-@uref{http://ldesoras.free.fr/prod.html#src_hiir, HIIR library by Laurent De
-Soras}, updated to version 1.40.  HIIR is a C++ library for changing the
-sampling rate of a signal by a factor two, in both directions (upsampling and
-downsampling), obtaining two signals with a π/2 phase difference (Hilbert
-transform).  It is made of a two-path polyphase IIR filter, implemented with
-FPU, 3DNow!, SSE, SSE2, AVX, AVX-512 and NEON instruction sets.
-
-This package contains the same as the original library, except with the
-contents of one source file moved into a header file (and set as inline) to
-make the library header-only, and with the test folder removed.")
-      (license license:wtfpl2))))
-
 (define-public redumper
   (package
     (name "redumper")
@@ -6713,23 +6529,22 @@ on the ALSA software PCM plugin.")
 (define-public snd
   (package
     (name "snd")
-    (version "26.3")
+    (version "25.2")
-    (source
+    (source (origin
-     (origin
+              (method url-fetch)
-       (method url-fetch)
+              (uri (string-append "ftp://ccrma-ftp.stanford.edu/pub/Lisp/"
-       (uri (string-append "https://ccrma.stanford.edu/software/snd/snd-"
+                                  "snd-" version ".tar.gz"))
-                           version ".tar.gz"))
+              (sha256
-       (sha256
+               (base32
-        (base32
+                "0fgxqk0byxdj6059mb9d5qic2dqjabz49j0szsrn2y3c9nz6iyq4"))))
-         "1d573mjlrn9rhl9g0a3d1rkar34q60ln8mwlbibfalpn8lsz59a0"))))
     (build-system gnu-build-system)
     (arguments
      (list
-      #:tests? #f                       ; No tests.
+      #:tests? #f                       ; no tests
-      #:out-of-source? #f               ; Required by 'install-doc'.
+      #:out-of-source? #f               ; for the 'install-doc' phase
       #:configure-flags
-      #~(let
+      #~(let ((docdir (string-append #$output "/share/doc/"
-            ((docdir (string-append #$output "/share/doc/snd-" #$version)))
+                                     #$name "-" #$version)))
           (list "--with-alsa"
                 "--with-jack"
                 "--with-gmp"
@@ -6737,20 +6552,18 @@ on the ALSA software PCM plugin.")
                 (string-append "--with-doc-dir=" docdir)))
       #:phases
       #~(modify-phases %standard-phases
-          (add-after 'install 'install-s7-h
+          (add-after 'install 'install-s7
             (lambda _
-              (install-file "s7.h" (string-append #$output
+              (install-file "s7.h" (string-append #$output "/include"))))
-                                                  "/include"))))
           (add-after 'install 'install-doc
             (lambda _
-              (let
+              (let ((doc (string-append #$output "/share/doc/"
-                  ((docdir (string-append #$output "/share/doc/snd-"
+                                        #$name "-" #$version)))
-                                          #$version)))
                 (for-each
                  (lambda (f)
-                   (install-file f docdir))
+                   (install-file f doc))
                  (find-files "." "\\.html$"))
-                (copy-recursively "pix" (string-append docdir "/pix"))))))))
+                (copy-recursively "pix" (string-append doc "/pix"))))))))
     (native-inputs
      (list pkg-config))
     (inputs
@@ -6769,16 +6582,13 @@ on the ALSA software PCM plugin.")
            timidity++
            vorbis-tools
            wavpack))
-    (home-page "https://ccrma.stanford.edu/software/snd/snd/snd.html")
     (synopsis "Sound editor")
+    (home-page "https://ccrma.stanford.edu/software/snd/")
     (description
      "Snd is a sound editor modelled loosely after Emacs.  It can be
 customized and extended using either the s7 Scheme implementation (included in
 the Snd sources), Ruby, or Forth.")
-    (license
+    (license (license:non-copyleft "file://COPYING"))))
-     ;; INFO: pkgsrc classifies this as `esdl-license', a license not included
-     ;; in OSI or FSF lists, despite being similar to ISC.
-     (license:non-copyleft "file://COPYING"))))
 
 (define-public libspecbleach
   (package
@@ -7213,6 +7023,32 @@ developing fully accurate DirectX Audio runtime libraries.")
            license:expat
            license:public-domain))))
 
+(define-public gnaural
+  (package
+    (name "gnaural")
+    (version "20110606")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (string-append "mirror://sourceforge/gnaural/Gnaural/gnaural_"
+                           version ".tar.xz"))
+       (sha256
+        (base32
+         "1gq519c0imsh57zklyi0f8h64l3ai48lh672c834470z8c6kvbfi"))))
+    (build-system gnu-build-system)
+    (inputs
+     (list alsa-lib gtk+-2 libsndfile portaudio))
+    (native-inputs
+     (list pkg-config))
+    (home-page "https://gnaural.sourceforge.net/")
+    (synopsis "Binaural beat synthesizer")
+    (description "Gnaural is a programmable auditory binaural beat synthesizer
+intended to be used for brainwave entrainment.  Gnaural supports creation of
+binaural beat tracks of different frequencies and exporting of tracks into
+different audio formats.  Gnaural can also be linked over the internet with
+other Gnaural instances, allowing synchronous sessions between many users.")
+    (license license:gpl2+)))
+
 (define-public darkice
   (package
     (name "darkice")
@@ -7423,7 +7259,6 @@ as is the case with audio plugins.")
                                        (find-files "bin")))))))))
     (inputs
      (list alsa-lib
-           bash-minimal
            ffmpeg
            fluidsynth
            file
@@ -7481,8 +7316,8 @@ default and preferred audio driver but also supports native drivers like ALSA.")
 
 ;;; This package variant tracks the latest in-development 2.6 release.
 (define-public carla-2.6
-  (let ((commit "294a80145e39c0755ab9073d90fd8b9524fbfc84")
+  (let ((commit "aa400535b31c67f4b6c1b28e6e20e4d4f82111a3")
-        (revision "1"))
+        (revision "0"))
     (package
       (inherit carla)
       (name "carla")
@@ -7496,12 +7331,7 @@ default and preferred audio driver but also supports native drivers like ALSA.")
            (commit commit)))
          (file-name (git-file-name name version))
          (sha256
-          (base32 "053yfwf9l9vqvq95c354by6nm8ym0wgkv3fr1434x5w9n1344z0z"))))
+          (base32 "0cnj2sgr60f5h6wdfmihc214wf3n74686sipl3iyzmylqrcyhbjn")))))))
-      (inputs
-       (modify-inputs (package-inputs carla)
-         (replace "python-pyqt" python-pyqt-6)
-         (replace "qtbase" qtbase)
-         (replace "qtwayland" qtwayland))))))
 
 ;; This source is a fork of vst3sdk with the documentation and VSTGUI
 ;; submodules removed and a dummy `meson.build` file that just lists all
@@ -7991,59 +7821,60 @@ Rate} 3600x2250 bit/s vocoder used in various radio systems.")
                   (delete-file-recursively "third_party")
                   (delete-file-recursively "modules")))))
     (build-system cmake-build-system)
-    (arguments
-     (list
-      #:configure-flags
-      #~(list "-DLINK_BUILD_QT_EXAMPLES=ON"
-              "-DLINK_BUILD_JACK=ON")
-      #:phases
-      #~(modify-phases %standard-phases
-          (replace 'check
-            (lambda* (#:key inputs tests? #:allow-other-keys)
-              (when tests?
-                (let* ((python (search-input-file inputs "/bin/python3"))
-                       (run-tests "../source/ci/run-tests.py"))
-                  (invoke python run-tests "--target" "LinkCoreTest")
-                  (invoke python run-tests "--target" "LinkDiscoveryTest")))))
-          (add-before 'install 'patch-cmake
-            (lambda* (#:key inputs #:allow-other-keys)
-              (let* ((source "../source/"))
-                (substitute* (string-append source
-                                            "cmake_include/AsioStandaloneConfig.cmake")
-                  (((string-append "\\$\\{CMAKE_CURRENT_LIST_DIR\\}/\\.\\./"
-                                   "modules/asio-standalone/asio/include"))
-                   (dirname (search-input-file inputs "include/asio.hpp"))))
-                (substitute* (string-append source "AbletonLinkConfig.cmake")
-                  (("\\$\\{CMAKE_CURRENT_LIST_DIR\\}/include")
-                   "${CMAKE_CURRENT_LIST_DIR}/../../../include")
-                  (("\\$\\{CMAKE_CURRENT_LIST_DIR\\}/include/ableton/Link\\.hpp")
-                   "${CMAKE_CURRENT_LIST_DIR}/../../../include/ableton/Link.hpp")))))
-          (replace 'install
-            (lambda _
-              (let* ((out #$output)
-                     (lib-cmake (string-append out "/lib/cmake/ableton-link"))
-                     (source "../source"))
-                (for-each delete-file
-                          '("bin/LinkDiscoveryTest" "bin/LinkCoreTest"))
-                (copy-recursively "bin" (string-append out "/bin"))
-                (copy-recursively (string-append source "/include/ableton")
-                                  (string-append out "/include/ableton"))
-                (install-file (string-append source "/AbletonLinkConfig.cmake")
-                              lib-cmake)
-                (install-file (string-append source
-                                             "/cmake_include/AsioStandaloneConfig.cmake")
-                              (string-append lib-cmake "/cmake_include"))))))))
     (native-inputs
      (list catch-framework
-           portaudio                    ;for portaudio examples
+           python ;for running tests
-           python                       ;for running tests
+           portaudio)) ;for portaudio examples
-           python-setuptools))          ;for running tests
     (inputs
      (list jack-1)) ;for JACK examples
     (propagated-inputs
      ;; This is because include/ableton/platforms/asio/AsioWrapper.hpp
      ;; contains '#include <asio.hpp>'.
      (list asio-1.28))
+    (arguments
+     `(#:configure-flags
+       '("-DLINK_BUILD_QT_EXAMPLES=ON"
+         "-DLINK_BUILD_JACK=ON")
+       #:phases
+       (modify-phases %standard-phases
+         (replace 'check
+           (lambda* (#:key inputs tests? #:allow-other-keys)
+             (when tests?
+               (let* ((python (search-input-file inputs "/bin/python3"))
+                      (run-tests "../source/ci/run-tests.py"))
+                 (invoke python run-tests "--target" "LinkCoreTest")
+                 (invoke python run-tests "--target" "LinkDiscoveryTest")))))
+         (add-before 'install 'patch-cmake
+           (lambda* (#:key inputs #:allow-other-keys)
+             (let* ((source "../source/"))
+               (substitute* (string-append source
+                                           "cmake_include/AsioStandaloneConfig.cmake")
+                 (((string-append "\\$\\{CMAKE_CURRENT_LIST_DIR\\}/\\.\\./"
+                                  "modules/asio-standalone/asio/include"))
+                  (string-append (assoc-ref inputs "asio")
+                                 "/include")))
+               (substitute* (string-append source "AbletonLinkConfig.cmake")
+                 (("\\$\\{CMAKE_CURRENT_LIST_DIR\\}/include")
+                  "${CMAKE_CURRENT_LIST_DIR}/../../../include")
+                 (("\\$\\{CMAKE_CURRENT_LIST_DIR\\}/include/ableton/Link\\.hpp")
+                  "${CMAKE_CURRENT_LIST_DIR}/../../../include/ableton/Link.hpp")))))
+         (replace 'install
+           (lambda* (#:key outputs #:allow-other-keys)
+             (let* ((out (assoc-ref outputs "out"))
+                    (bin (string-append out "/bin"))
+                    (lib-cmake (string-append out "/lib/cmake/ableton-link"))
+                    (source "../source"))
+               (for-each (lambda (test-file)
+                           (delete-file test-file))
+                         '("bin/LinkDiscoveryTest" "bin/LinkCoreTest"))
+               (copy-recursively "bin" bin)
+               (copy-recursively (string-append source "/include/ableton")
+                                 (string-append out "/include/ableton"))
+               (install-file (string-append source "/AbletonLinkConfig.cmake")
+                             lib-cmake)
+               (install-file (string-append source
+                                            "/cmake_include/AsioStandaloneConfig.cmake")
+                             (string-append lib-cmake "/cmake_include"))))))))
     (home-page "https://github.com/Ableton/link")
     (synopsis "Synchronize musical beat, tempo, and phase across multiple applications")
     (description
@@ -8141,16 +7972,7 @@ Icecast server.")
            (lambda _
              (substitute* "misc.c"
                (("#include <stdio.h>\n" all)
-                (string-append all "#include <string.h>\n")))
+                (string-append all "#include <string.h>\n")))))
-             (substitute* "wavsubs.c"
-               (("#include \"wavsubs.h\"\n" all)
-                (string-append all "#include <stdlib.h>")))
-             (substitute* "wavfile.c"
-               (("#include \"wavsubs.h\"\n" all)
-                (string-append all "#include <stdlib.h>")))
-             (substitute* "generator.c"
-               (("#include \"wavsubs.h\"\n" all)
-                (string-append all "#include <stdlib.h>")))))
          (delete 'configure)
          (replace 'install
            (lambda* (#:key make-flags outputs #:allow-other-keys)
@@ -8162,8 +7984,7 @@ Icecast server.")
     (inputs
      (list ncurses))
     (native-inputs
-     `(("gcc" ,gcc-9)
+     `(("groff" ,groff-minimal)         ; for nroff
-       ("groff" ,groff-minimal)         ; for nroff
        ("util-linux" ,util-linux)))     ; for col
     (home-page "https://github.com/bleskodev/siggen")
     (synopsis "Signal generation tools")
@@ -8239,7 +8060,7 @@ as sample rate, determining whether an audio file is silent, and much more.")
     (propagated-inputs
      (list python-numba python-numpy python-scipy python-six))
     (native-inputs
-     (list python-pytest python-setuptools python-wheel))
+     (list python-pytest python-pytest-cov python-setuptools python-wheel))
     (home-page "https://github.com/bmcfee/resampy")
     (synopsis "Efficient signal resampling")
     (description
@@ -8257,10 +8078,10 @@ Home Page}.")
      (origin
        (method git-fetch)
        (uri (git-reference
-              (url "https://github.com/librosa/librosa/")
+             (url "https://github.com/librosa/librosa/")
-              (commit version)
+             (commit version)
-              ;; TODO: Package test data.
+             ;; For test files.
-              (recursive? #true)))
+             (recursive? #true)))
        (file-name (git-file-name name version))
        (sha256
         (base32 "065x43hx670rjrclxi4hiqxscllb16v9s7myjvg7rd5pd3y0k7sg"))))
@@ -8268,13 +8089,15 @@ Home Page}.")
     (arguments
      (list
       #:test-flags
-      #~(list "-k" (string-append
+      ;; Ignore --mpl flag.
-                    ;; Resampling tests require python-samplerate.
+      '(list "-c" "/dev/null"
-                    "not resample"
+             "-k" (string-append
-                    ;; These tests use Pooch and download data files.
+                   ;; Resampling tests require python-samplerate.
-                    " and not example and not test_cite"
+                   "not resample"
-                    ;; XXX assert 22050 == 31744
+                   ;; These tests use Pooch and download data files.
-                    " and not test_stream"))))
+                   " and not example and not test_cite"
+                   ;; XXX assert 22050 == 31744
+                   " and not test_stream"))))
     (propagated-inputs
      (list python-audioread
            python-decorator
@@ -8293,9 +8116,10 @@ Home Page}.")
      (list python-matplotlib
            python-packaging
            python-pytest
-           python-pytest-mpl
+           python-pytest-cov
            python-resampy
-           python-setuptools))
+           python-setuptools
+           python-wheel))
     (home-page "https://librosa.org")
     (synopsis "Python module for audio and music processing")
     (description

gnu/packages/aux-files/linux-libre/6.12-riscv.conf

@@ -1989,7 +1989,7 @@ CONFIG_SCSI_LOWLEVEL=y
 # CONFIG_SCSI_DEBUG is not set
 # CONFIG_SCSI_PMCRAID is not set
 # CONFIG_SCSI_PM8001 is not set
-CONFIG_SCSI_VIRTIO=m
+# CONFIG_SCSI_VIRTIO is not set
 # CONFIG_SCSI_DH is not set
 # end of SCSI device support
 

gnu/packages/aux-files/python/pytest_guix.py

@@ -1,58 +0,0 @@
-# GNU Guix --- Functional package management for GNU
-# Copyright © 2025 Nicolas Graves <ngraves@ngraves.fr>
-#
-# This file is part of GNU Guix.
-#
-# GNU Guix is free software; you can redistribute it and/or modify it
-# under the terms of the GNU General Public License as published by
-# the Free Software Foundation; either version 3 of the License, or (at
-# your option) any later version.
-#
-# GNU Guix is distributed in the hope that it will be useful, but
-# WITHOUT ANY WARRANTY; without even the implied warranty of
-# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
-# GNU General Public License for more details.
-#
-# You should have received a copy of the GNU General Public License
-# along with GNU Guix.  If not, see <http://www.gnu.org/licenses/>.
-
-import importlib.util
-import json
-
-
-def pytest_addoption(parser):
-    """Add stub options to be ignored by pytest.
-
-    More precisely, inject all options provided in .pytest_guix_options.json,
-    except options whose plugin is indeed installed.
-
-    For example, if the json file records --cov:
-      if the pytest_cov module is installed, its --cov will be used.
-      otherwise, --cov is ignored (read by this parser, but nothing is done
-      with it).
-
-    Flags can be given with additional keyword arguments in a json object.
-    If the json object is not given, fallback to the default
-    {"action": "append", "nargs": "?"}.  In practice, these arguments are only
-    mandatory for the store_true and store_const actions to avoid eating other
-    arguments.
-
-    This allows to remove development packages, which are not required at build
-    time while at the same time avoiding the need to adjust test options in
-    pyproject.toml or other configuration files.
-    """
-    with open(".pytest_guix_options.json", "r") as options_file:
-        plugin_options = json.load(options_file)
-        group = parser.getgroup(
-            "guix", "Options ignored by the Guix pyproject-build-system"
-        )
-
-        # Only add options for plugins that are not present.
-        for key, options in plugin_options.items():
-            if importlib.util.find_spec(f"pytest_{key}") is None:
-                # Plugin not found, add stub options
-                for option, kwargs in options.items():
-                    if kwargs:
-                        group.addoption(option, **kwargs)
-                    else:
-                        group.addoption(option, action="append", nargs="?")

gnu/packages/axoloti.scm

@@ -341,7 +341,7 @@ runtime.")
        ("java-jgit" ,java-jgit-4.2)
        ("axoloti-runtime" ,axoloti-runtime)))
     (native-inputs
-     (list ant zip ; for repacking the jar
+     (list ant/java7 zip ; for repacking the jar
            unzip))
     (description
      "The Axoloti patcher offers a “patcher” environment similar to Pure Data
@@ -647,7 +647,7 @@ This package provides the runtime.")
        ("java-slf4j-api" ,java-slf4j-api)
        ("ksoloti-runtime" ,ksoloti-runtime)))
     (native-inputs
-     (list ant zip                      ;for repacking the jar
+     (list ant/java7 zip                      ;for repacking the jar
            unzip))
     (description
      "Ksoloti is an environment for generating and processing digital audio.

gnu/packages/backup.scm

@@ -50,6 +50,7 @@
   #:use-module (guix build-system gnu)
   #:use-module (guix build-system go)
   #:use-module (guix build-system pyproject)
+  #:use-module (guix build-system python)
   #:use-module (guix build-system qt)
   #:use-module (guix download)
   #:use-module (guix gexp)
@@ -106,7 +107,6 @@
   #:use-module (gnu packages rsync)
   #:use-module (gnu packages ruby-xyz)
   #:use-module (gnu packages serialization)
-  #:use-module (gnu packages sphinx)
   #:use-module (gnu packages ssh)
   #:use-module (gnu packages time)
   #:use-module (gnu packages tls)
@@ -137,6 +137,7 @@
            python-paramiko
            python-pexpect
            python-pytest
+           python-pytest-runner
            python-setuptools-scm
            tzdata-for-tests
            python-mock))
@@ -631,26 +632,41 @@ rsnapshot uses hard links to deduplicate identical files.")
 (define-public borg
   (package
     (name "borg")
-    (version "1.4.4")
+    (version "1.4.3")
     (source
      (origin
-       (method git-fetch)
+       (method url-fetch)
-       (uri (git-reference
+       (uri (pypi-uri "borgbackup" version))
-              (url "https://github.com/borgbackup/borg")
-              (commit version)))
-       (file-name (git-file-name name version))
        (sha256
-        (base32 "0bk302lbjjz1y8dg78wqqys80bm7mzkj5yf6wgyqdwvbqpsnpim4"))))
+        (base32 "07s4jqcv03s98hi6lvqpvmnnhl532qnvv11mjy2xc08rbmsgmfvr"))
+       (snippet
+        #~(begin
+            ;; Delete files generated by Cython.  We used to have a regex that
+            ;; created the list of generated files but Borg has added new
+            ;; non-generated C files that cause the regex to generate the
+            ;; wrong list.
+            (for-each delete-file
+                      '("src/borg/algorithms/checksums.c"
+                        "src/borg/chunker.c"
+                        "src/borg/compress.c"
+                        "src/borg/crypto/low_level.c"
+                        "src/borg/hashindex.c"
+                        "src/borg/item.c"
+                        "src/borg/platform/darwin.c"
+                        "src/borg/platform/freebsd.c"
+                        "src/borg/platform/linux.c"
+                        "src/borg/platform/posix.c"
+                        "src/borg/platform/syncfilerange.c"
+                        "src/borg/platform/windows.c"))))))
     (build-system pyproject-build-system)
     (arguments
      (list
       #:modules '((srfi srfi-26)        ; for cut
                   (guix build utils)
                   (guix build pyproject-build-system))
-      ;; tests: 1318 passed, 293 skipped
       #:test-flags
       #~(list "--benchmark-skip"
-              "--numprocesses" (number->string (min 8 (parallel-job-count)))
+              "--numprocesses" (number->string (parallel-job-count))
               "--pyargs" "borg.testsuite"
               "-k" (string-join
                     ;; These tests need to write to '/var'.
@@ -671,15 +687,7 @@ rsnapshot uses hard links to deduplicate identical files.")
                           "test_mount_hardlinks "
                           "test_readonly_mount "
                           "test_fuse_versions_view "
-                          "test_migrate_lock_alive"
+                          "test_migrate_lock_alive")
-                          ;; Test files are not in /gnu/store
-                          "test_convert_all[False]"
-                          "test_convert_all[True]"
-                          "test_convert_segments[False]"
-                          "test_convert_segments[True]"
-                          "test_detect_attic_repo"
-                          "test_key_export_qr"
-                          "test_keys")
                     " and not "))
       #:phases
       #~(modify-phases %standard-phases
@@ -695,58 +703,46 @@ rsnapshot uses hard links to deduplicate identical files.")
                 (setenv "BORG_LIBLZ4_PREFIX" lz4)
                 (setenv "BORG_LIBXXHASH_PREFIX" xxhash)
                 (setenv "BORG_LIBZSTD_PREFIX" zstd))))
-          (add-before 'build 'fix-testsuite-setuid-mode
+          (add-after 'install 'install-doc
             (lambda _
-              (substitute* "src/borg/testsuite/archiver.py"
+              (let ((man (string-append #$output "/share/man/man1"))
-                (("0o4755") "0o0755"))))
+                    (misc (string-append #$output "/share/doc/borg-"
-          (add-after 'install 'build-and-install-docs
+                                         #$(package-version this-package))))
-            (lambda _
-              (let* ((doc (string-append #$output "/share/doc/borg-" #$version))
-                     (html (string-append doc "/html"))
-                     (txt (string-append doc "/txt"))
-                     (misc (string-append doc "/misc"))
-                     (man (string-append #$output "/share/man/man1")))
-                (with-directory-excursion "docs"
-                  (invoke "make" "text" "man" "singlehtml"))
                 (for-each (cut install-file <> misc)
                           '("docs/misc/create_chunker-params.txt"
                             "docs/misc/borg-data-flow.png"
                             "docs/misc/internals-picture.txt"
                             "docs/misc/prune-example.txt"))
-                (copy-recursively "docs/_build/man" man)
+                (copy-recursively "docs/man" man))))
-                (copy-recursively "docs/_build/singlehtml" html)
+          (add-after 'install-doc 'install-shell-completions
-                (copy-recursively "docs/_build/text" txt))))
-          (add-after 'build-and-install-docs 'install-shell-completions
             (lambda _
-              (let* ((etc (string-append #$output "/etc"))
+              (let ((etc (string-append #$output "/etc"))
-                     (share (string-append #$output "/share"))
+                    (share (string-append #$output "/share")))
-                     (bash (string-append etc "/bash_completion.d"))
-                     (zsh (string-append share "/zsh/site-functions"))
-                     (fish (string-append share "/fish/vendor_completions.d")))
                 (with-directory-excursion "scripts/shell_completions"
-                  (install-file "bash/borg" bash)
+                  (install-file "bash/borg"
-                  (install-file "zsh/_borg" zsh)
+                                (string-append etc "/bash_completion.d"))
-                  (install-file "fish/borg.fish" fish))))))))
+                  (install-file "zsh/_borg"
+                                (string-append share "/zsh/site-functions"))
+                  (install-file "fish/borg.fish"
+                                (string-append share "/fish/vendor_completions.d")))))))))
     (native-inputs
      (list python-cython
-           python-guzzle-sphinx-theme
+           python-dateutil
-           python-pkgconfig
            python-pytest
            python-pytest-benchmark
            python-pytest-xdist
            python-setuptools
            python-setuptools-scm
-           python-sphinx
+           python-wheel))
-           python-sphinxcontrib-jquery))
     (inputs
      (list acl
            lz4
            openssl
-           python-msgpack
+           ;; This is the latest version of msgpack accepted by 'setup.py'.
+           python-msgpack-for-borg
            ;; FUSE 3 isn't working well, so we stick with FUSE 2 for now:
            ;; <https://issues.guix.gnu.org/53407>
            python-llfuse
-           python-packaging
            xxhash
            `(,zstd "lib")))
     (synopsis "Deduplicated, encrypted, authenticated and compressed backups")
@@ -897,7 +893,7 @@ is like a time machine for your data.")
 (define-public restic
   (package
     (name "restic")
-    (version "0.18.1")
+    (version "0.17.3")
     (source
      (origin
        (method git-fetch)
@@ -906,7 +902,7 @@ is like a time machine for your data.")
               (commit (string-append "v" version))))
        (file-name (git-file-name name version))
        (sha256
-        (base32 "0gxhknn022bwg2s8hababqg3vjkzflq59vr67y7r1c8fjnlsgf4l"))))
+        (base32 "1wsgq7f0bfi0i5iiwcc3hlf2lhxcnz3zfs8p8bc6l913r9hvyg1x"))))
     (build-system go-build-system)
     (arguments
      (list
@@ -915,18 +911,15 @@ is like a time machine for your data.")
       #:import-path "github.com/restic/restic/cmd/restic"
       #:unpack-path "github.com/restic/restic"
       #:embed-files #~(list "children" "nodes" "text")
+      #:test-flags
+      ;; Python is required.
+      #~(list "-skip" "TestStdinFromCommand|TestStdinFromCommandNoOutput")
       #:test-subdirs #~(list "../../...")
       #:phases
       #~(modify-phases %standard-phases
-          (add-after 'unpack 'fix-python-path
-            (lambda* (#:key inputs unpack-path #:allow-other-keys)
-              (with-directory-excursion (string-append "src/" unpack-path)
-                (substitute* "cmd/restic/cmd_backup_integration_test.go"
-                  (("python")
-                   (search-input-file inputs "/bin/python3"))))))
           (add-after 'install 'install-docs
-            (lambda* (#:key unpack-path #:allow-other-keys)
+            (lambda* (#:key import-path #:allow-other-keys)
-              (with-directory-excursion (string-append "src/" unpack-path)
+              (with-directory-excursion (string-append "src/" import-path)
                 (let* ((man "/share/man")
                        (man-section (string-append man "/man")))
                   ;; Install all the man pages to "out".
@@ -949,12 +942,12 @@ is like a time machine for your data.")
            go-github-com-cenkalti-backoff-v4
            go-github-com-cespare-xxhash-v2
            go-github-com-elithrar-simple-scrypt
-           ;; go-github-com-go-ole-go-ole       ;Windows only
+           ;; go-github-com-go-ole-go-ole ;windows only
            go-github-com-google-go-cmp
            go-github-com-hashicorp-golang-lru-v2
            go-github-com-klauspost-compress
-           ;; go-github-com-microsoft-go-winio  ;Windows only
            go-github-com-minio-minio-go-v7
+           go-github-com-minio-sha256-simd
            go-github-com-ncw-swift-v2
            go-github-com-peterbourgon-unixtransport
            go-github-com-pkg-errors
@@ -974,7 +967,6 @@ is like a time machine for your data.")
            go-golang-org-x-text
            go-golang-org-x-time
            go-google-golang-org-api
-           python-minimal
 
            ;; XXX: These packages have to be bootstrapped to break cycle with
            ;; go-google-golang-org-grpc.
@@ -1268,9 +1260,10 @@ compression parameters used by Gzip.")
 (define-public borgmatic
   (package
     (name "borgmatic")
-    (version "2.1.5")
+    (version "2.1.2")
     (source
      (origin
+       ;; PyPI archive does not contain NEWS file needed for one test.
        (method git-fetch)
        (uri (git-reference
               (url "https://projects.torsion.org/borgmatic-collective/borgmatic")
@@ -1278,11 +1271,10 @@ compression parameters used by Gzip.")
        (file-name (git-file-name name version))
        (sha256
         (base32
-         "17i15ysg0wbcnfvki8wz2z9gx3zx99czv3czjh83y2m1xppvqbl5"))))
+         "0vrpl21n6hf3pj0di4n7s36jq64sx24c93j48cmbdgczs8jiwi36"))))
     (build-system pyproject-build-system)
     (arguments
      (list
-      ;; tests: 2609 passed
       #:phases
       #~(modify-phases %standard-phases
           (add-after 'unpack 'configure
@@ -1297,12 +1289,19 @@ compression parameters used by Gzip.")
                 (("(module.get_local_path.+ == )'borg'" all start)
                  (string-append start "'"
                                 (search-input-file inputs "bin/borg")
-                                "'"))))))))
+                                "'")))))
+          (add-before 'check 'set-path
+            (lambda _
+              ;; Tests require the installed executable.
+              (setenv "PATH"
+                      (string-append #$output "/bin" ":"
+                                     (getenv "PATH"))))))))
     (native-inputs
      (list python-flexmock
            python-pytest
-           python-pytest-timeout
+           python-pytest-cov
-           python-setuptools))
+           python-setuptools
+           python-wheel))
     (inputs
      (list borg
            python-apprise
@@ -1364,9 +1363,9 @@ borgmatic is powered by borg.")
             (assoc-ref qt:%standard-phases 'qt-wrap)))))
     (native-inputs
      (list python-platformdirs
-           python-pytest
            python-pytest-mock
            python-pytest-qt
+           python-pytest-runner
            python-setuptools
            python-setuptools-git))
     (inputs

gnu/packages/benchmark.scm

@@ -13,8 +13,7 @@
 ;;; Copyright © 2021 Arun Isaac <arunisaac@systemreboot.net>
 ;;; Copyright © 2022 Tomasz Jeneralczyk <tj@schwi.pl>
 ;;; Copyright © 2024 Nicolas Graves <ngraves@ngraves.fr>
-;;; Copyright © 2025-2026 Artyom V. Poptsov <poptsov.artyom@gmail.com>
+;;; Copyright © 2025 Artyom V. Poptsov <poptsov.artyom@gmail.com>
-;;; Copyright © 2026 Sughosha <sughosha@disroot.org>
 ;;; Copyright © 2023 Advanced Micro Devices, Inc.
 ;;;
 ;;; This file is part of GNU Guix.
@@ -42,8 +41,8 @@
   #:use-module (guix amd-gpu)
   #:use-module (guix search-paths)
   #:use-module (guix build-system cmake)
-  #:use-module (guix build-system qt)
   #:use-module (guix build-system gnu)
+  #:use-module (guix build-system python)
   #:use-module (guix build-system pyproject)
   #:use-module (guix build-system meson)
   #:use-module (gnu packages)
@@ -679,26 +678,20 @@ the user is too low.  To raise such limit on a Guix System, refer to
          "0ifnw8vnkcgrksx7g5d9ii4kjppqnk32lvrybdybmibyvag6zfdc"))))
     (build-system gnu-build-system)
     (arguments
-     (list #:tests? #f                      ; no tests
+     `(#:tests? #f                      ; no tests
-           #:make-flags
+       #:phases
-           #~(list "CFLAGS=-g -O2 -Wno-error=implicit-function-declaration"
+       (modify-phases %standard-phases
-                   (string-append "CC=" #$(cc-for-target)))
+         (add-after 'unpack 'fix-broken-makefile
-           #:phases
+           (lambda _
-           #~(modify-phases %standard-phases
+             ;; Remove erroneous "-lm" target
-               (add-after 'unpack 'fix-broken-makefile
+             (substitute* "Makefile"
-                 (lambda _
+               (("hackbench.o -lm") "hackbench.o"))))
-                   ;; Remove erroneous "-lm" target
+         (delete 'configure)
-                   (substitute* "Makefile"
+         (replace 'install
-                     (("hackbench.o -lm") "hackbench.o"))))
+           (lambda* (#:key outputs #:allow-other-keys)
-               (delete 'configure)
+             (let ((out (assoc-ref outputs "out")))
-               (replace 'install
+               (install-file "interbench" (string-append out "/bin"))
-                 (lambda _
+               (install-file "interbench.8" (string-append out "/share/man/man8"))))))))
-                   (install-file "interbench"
-                                 (string-append #$output "/bin"))
-                   (install-file "interbench.8"
-                                 (string-append #$output
-                                                "/share/man/man8")))))))
-    (native-inputs (list gcc-10))
     (home-page "http://users.on.net/~ckolivas/interbench/")
     (synopsis "Interactivity benchmark")
     (description "interbench is designed to benchmark interactivity on Linux.
@@ -737,7 +730,7 @@ and options.  With careful benchmarking, different hardware can be compared.")
 (define-public kdiskmark
   (package
     (name "kdiskmark")
-    (version "3.2.0")
+    (version "3.1.4")
     (source (origin
               (method git-fetch)
               (uri (git-reference
@@ -746,13 +739,14 @@ and options.  With careful benchmarking, different hardware can be compared.")
               (file-name (git-file-name name version))
               (sha256
                (base32
-                "161yyy4fcy5bnzhbcd7p90nlcslcsfp7n3m3bz9bygch7bdjw46g"))))
+                "1x8vd6swmf0i7f6m6wl2154n6plx8jkmcqfq6zxbdy255f1da74c"))))
-    (build-system qt-build-system)
+    (build-system cmake-build-system)
     (arguments
      (list
-      #:qtbase qtbase
       #:configure-flags
-      #~(list (string-append "-DPOLKITQT-1_INSTALL_DIR=" #$output))
+      ;; Drop runtime dependency on KDE's KFAuth.
+      #~(list "-DPERFORM_PAGECACHE_CLEARING_USING_KF5AUTH=no"
+              (string-append "-DPOLKITQT-1_INSTALL_DIR=" #$output))
       #:tests? #f                       ;no test suite
       #:phases
       #~(modify-phases %standard-phases
@@ -765,10 +759,10 @@ and options.  With careful benchmarking, different hardware can be compared.")
             (lambda _
               (rmdir "src/singleapplication")
               (symlink #$(package-source
-                          (this-package-input "single-application"))
+                          (this-package-input "single-application-qt5"))
                        "src/singleapplication"))))))
-    (native-inputs (list extra-cmake-modules qttools))
+    (native-inputs (list extra-cmake-modules qttools-5))
-    (inputs (list fio polkit-qt6 single-application qtwayland))
+    (inputs (list fio polkit-qt qtbase-5 single-application-qt5))
     (home-page "https://github.com/JonMagon/KDiskMark")
     (synopsis "Simple disk benchmark tool")
     (description "KDiskMark is an HDD and SSD benchmark tool.  KDiskMark

gnu/packages/bison.scm

@@ -28,7 +28,7 @@
   #:use-module (guix build-system gnu)
   #:use-module (gnu packages m4)
   #:use-module (gnu packages perl)
-  #:use-module (gnu packages compiler-tools)
+  #:use-module (gnu packages flex)
   #:use-module (srfi srfi-1))
 
 (define-public bison

gnu/packages/bittorrent.scm

@@ -86,6 +86,7 @@
   #:use-module (guix build-system gnu)
   #:use-module (guix build-system meson)
   #:use-module (guix build-system pyproject)
+  #:use-module (guix build-system python)
   #:use-module (guix build-system qt)
   #:use-module (guix download)
   #:use-module (guix gexp)
@@ -360,18 +361,18 @@ Transmission BitTorrent daemon.")
     (name "aria2")
     (version "1.37.0")
     (source (origin
-              (method git-fetch)
+              (method url-fetch)
-              (uri (git-reference
+              (uri (string-append "https://github.com/aria2/aria2/releases/"
-                     (url "https://github.com/aria2/aria2")
+                                  "download/release-" version
-                     (commit (string-append "release-" version))))
+                                  "/aria2-" version ".tar.xz"))
               (sha256
                (base32
-                "1yr9yxr7z3bdg51afpzj0i63xl2rdk1prl20qws21y6r1x58vf65"))
+                "0sxng4pynhj2qinranpv6wyzys3d42kz1gg2nrn63sw5f2nj1930"))
-              (file-name (git-file-name name version))
               (patches (search-patches "aria2-unbundle-wslay.patch"))
               (snippet
                #~(begin (use-modules (guix build utils))
-                        (delete-file-recursively "deps")))))
+                        (delete-file-recursively "deps")
+                        (delete-file "configure")))))
     (build-system gnu-build-system)
     (arguments
      (list
@@ -381,13 +382,10 @@ Transmission BitTorrent daemon.")
                               #$output "/etc/bash_completion.d/"))
        #:phases
        #~(modify-phases %standard-phases
-           (add-after 'unpack 'update-gettext-version
+           (add-after 'unpack 'patch-configure
              (lambda _
                (substitute* "configure.ac"
-                 (("AM_GNU_GETTEXT_VERSION\\(.*\\)")
+                 (("0[.]18") "0.19.6"))))
-                  (format #f "AM_GNU_GETTEXT_VERSION([~a])"
-                          #$(package-version (this-package-native-input
-                                              "gettext-minimal")))))))
            (add-after 'unpack 'delete-socket-tests
              (lambda _
                (substitute* "test/LpdMessageDispatcherTest.cc"
@@ -419,6 +417,8 @@ Transmission BitTorrent daemon.")
       "Aria2 is a lightweight, multi-protocol & multi-source command-line
 download utility.  It supports HTTP/HTTPS, FTP, SFTP, BitTorrent and Metalink.
 Aria2 can be manipulated via built-in JSON-RPC and XML-RPC interfaces.")
+    (properties
+     '((release-monitoring-url . "https://github.com/aria2/aria2/releases")))
     (license license:gpl2+)))
 
 (define-public uget
@@ -533,9 +533,8 @@ and will take advantage of multiple processor cores where possible.")
     (inputs (list boost-1.83 openssl))
     (native-inputs
      (list libfaketime
-           pkg-config
+           python-wrapper
-           python-setuptools
+           pkg-config))
-           python-wrapper))
     (home-page "https://www.libtorrent.org/")
     (synopsis "Feature-complete BitTorrent implementation")
     (description

gnu/packages/books.scm

@@ -334,7 +334,7 @@ parallel study, and original language study.")
 (define-public book-emacs-lisp-elements
   (package
     (name "book-emacs-lisp-elements")
-    (version "2.0.4")
+    (version "2.0.1")
     (source
      (origin
        (method git-fetch)
@@ -343,7 +343,7 @@ parallel study, and original language study.")
              (commit version)))
        (file-name (git-file-name name version))
        (sha256
-        (base32 "06mhrb16h93n3s3srcfgmzsyh2lxx4ffj1di6qvczfg4039pi3c8"))))
+        (base32 "0774zycgx3zspn6f8pszap1751xgrlv2h3x66kksnj589nfnwzil"))))
     (build-system emacs-build-system)
     (arguments
      (list

gnu/packages/boost.scm

@@ -83,6 +83,9 @@
     (build-system gnu-build-system)
     (arguments
      (list
+      #:imported-modules %pyproject-build-system-modules
+      #:modules `(((guix build pyproject-build-system) #:select (python-version))
+                  ,@%default-gnu-modules)
       #:tests? #f
       #:configure-flags
       #~(let ((icu (dirname (dirname (search-input-file
@@ -91,26 +94,17 @@
            ;; Auto-detection looks for ICU only in traditional
            ;; install locations.
            (string-append "--with-icu=" icu)
-           ;; Ditto for Python.  The Gexp can't be evaluated if python is not
+           ;; Ditto for Python.
-           ;; in the inputs (e.g. boost-for-mysql), so delay its evaluation
+           #$@(if (%current-target-system)
-           ;; after checking for python, rather than concurrently.
+                  #~()
-           #$@(force
+                  #~((let ((python (dirname (dirname (search-input-file
-               (if (or (%current-target-system)
+                                                      %build-inputs
-                       (not (this-package-input "python-minimal-wrapper")))
+                                                      "bin/python")))))
-                   (delay
+                       (string-append "--with-python-root=" python)
-                     #~())
+                       (string-append "--with-python=" python
-                   (delay
+                                      "/bin/python")
-                     #~((let ((python (dirname (dirname (search-input-file
+                       (string-append "--with-python-version="
-                                                         %build-inputs
+                                      (python-version python)))))
-                                                         "bin/python")))))
-                          (string-append "--with-python-root=" python)
-                          (string-append "--with-python=" python
-                                         "/bin/python")
-                          (string-append "--with-python-version="
-                                         #$(version-major+minor
-                                            (package-version
-                                             (this-package-input
-                                              "python-minimal-wrapper")))))))))
            "--with-toolset=gcc"))
       #:make-flags
       #~(list "threading=multi" "link=shared"
@@ -206,39 +200,29 @@
           (replace 'install
             (lambda* (#:key make-flags #:allow-other-keys)
               (apply invoke "./b2" "install" make-flags)))
-          #$@(force  ; See above for why the force is necessary.
+          #$@(if (%current-target-system)
-              (if (or (%current-target-system)
+                 #~()
-                      (not (this-package-input "python-minimal-wrapper")))
+                 #~((add-after 'install 'provide-libboost_python
-                  (delay
+                      (lambda* (#:key make-flags inputs outputs #:allow-other-keys)
-                    #~())
+                        (let* ((static? (member "link=static" make-flags))
-                  (delay
+                               (libext (if static? ".a" ".so"))
-                    #~((add-after 'install 'provide-libboost_python
+                               (python (dirname (dirname (search-input-file
-                         (lambda* (#:key make-flags inputs outputs
+                                                          inputs "bin/python"))))
-                                   #:allow-other-keys)
+                               (python-version (python-version python))
-                           (let* ((static? (member "link=static" make-flags))
+                               (libboost_pythonNN
-                                  (ext (if static? ".a" ".so"))
+                                (string-append "libboost_python"
-                                  (python (dirname
+                                               (string-join (string-split
-                                           (dirname (search-input-file
+                                                             python-version #\.)
-                                                     inputs "bin/python"))))
+                                                            "")
-                                  (python-version
+                                               libext)))
-                                   #$(version-major+minor
+                          (with-directory-excursion (string-append #$output "/lib")
-                                      (package-version
+                            (symlink libboost_pythonNN
-                                       (this-package-input
+                                     (string-append "libboost_python" libext))
-                                        "python-minimal-wrapper"))))
+                            ;; Some packages only look for the major version.
-                                  (NN (string-join (string-split
+                            (symlink libboost_pythonNN
-                                                    python-version #\.)
+                                     (string-append "libboost_python"
-                                                   ""))
+                                                    (string-take python-version 1)
-                                  (libboost_pythonNN
+                                                    libext)))))))))))
-                                   (string-append "libboost_python" NN ext))
-                                  (major (string-take python-version 1)))
-                             (with-directory-excursion
-                                 (string-append #$output "/lib")
-                               (symlink libboost_pythonNN
-                                        (string-append "libboost_python" ext))
-                               ;; Some packages only look for the major version.
-                               (symlink libboost_pythonNN
-                                        (string-append "libboost_python"
-                                                       major ext)))))))))))))
     (inputs
      (append
       (list icu4c zlib)

gnu/packages/bootloaders.scm

@@ -48,14 +48,13 @@
   #:use-module (gnu packages base)
   #:use-module (gnu packages disk)
   #:use-module (gnu packages bison)
-  #:use-module (gnu packages build-tools)
   #:use-module (gnu packages cdrom)
   #:use-module (gnu packages check)
   #:use-module (gnu packages compression)
   #:use-module (gnu packages cross-base)
   #:use-module (gnu packages disk)
   #:use-module (gnu packages firmware)
-  #:use-module (gnu packages compiler-tools)
+  #:use-module (gnu packages flex)
   #:use-module (gnu packages fontutils)
   #:use-module (gnu packages gcc)
   #:use-module (gnu packages gettext)
@@ -66,6 +65,7 @@
   #:use-module (gnu packages man)
   #:use-module (gnu packages mtools)
   #:use-module (gnu packages ncurses)
+  #:use-module (gnu packages ninja)
   #:use-module (gnu packages package-management)
   #:use-module (gnu packages perl)
   #:use-module (gnu packages pkg-config)
@@ -267,8 +267,8 @@
              ;; rebooting.
              (if (member (or (%current-target-system)
                              (%current-system))
-                           (package-supported-systems fuse))
+                           (package-supported-systems fuse-2))
-                 (list fuse)
+                 (list fuse-2)
                  '())))
     (native-inputs
      (append (list pkg-config
@@ -1815,68 +1815,63 @@ For more information, refer to
 (define-public os-prober
   (package
     (name "os-prober")
-    (version "1.84")
+    (version "1.81")
     (source
      (origin
-       (method git-fetch)
+       (method url-fetch)
-       (uri (git-reference
+       (uri (string-append "mirror://debian/pool/main/o/os-prober/os-prober_"
-              (url "https://salsa.debian.org/installer-team/os-prober.git")
+                           version ".tar.xz"))
-              (commit version)))
-       (file-name (git-file-name name version))
        (sha256
-        (base32 "1bji3w6nbqaz8zqrbmy8b1j5dph9xn7bdh1cd2z8ia1q125i6mgp"))))
+        (base32 "10w8jz6mqhp0skdcam9mpgv79vx1sv7lkpra3rqjg0jkhvn2in9g"))))
     (build-system gnu-build-system)
     (arguments
-     (list
+     `(#:modules ((guix build gnu-build-system)
-      #:tests? #f                       ; No tests.
-      #:modules '((guix build gnu-build-system)
                   (guix build utils)
-                  (ice-9 regex)         ; string-match
+                  (ice-9 regex)         ; for string-match
-                  (srfi srfi-26))       ; cut
+                  (srfi srfi-26))       ; for cut
-      #:make-flags
+       #:make-flags
-      #~(list (string-append "CC=" #$(cc-for-target)))
+       (list ,(string-append "CC=" (cc-for-target)))
-      #:phases
+       #:tests? #f                      ; no tests
-      #~(modify-phases %standard-phases
+       #:phases
-          (replace 'configure
+       (modify-phases %standard-phases
-            (lambda _
+         (replace 'configure
-              (substitute* (find-files ".")
+           (lambda* (#:key outputs #:allow-other-keys)
-                (("/usr") #$output))
+             (substitute* (find-files ".")
-              (substitute* (find-files "." "50mounted-tests$")
+               (("/usr") (assoc-ref outputs "out")))
-                (("mkdir") "mkdir -p -v"))))
+             (substitute* (find-files "." "50mounted-tests$")
-          (replace 'install
+               (("mkdir") "mkdir -p"))))
-            (lambda _
+         (replace 'install
-              (define (find-files-non-recursive directory)
+           (lambda* (#:key outputs #:allow-other-keys)
-                (find-files directory
+             (define (find-files-non-recursive directory)
-                            (lambda (file stat)
+               (find-files directory
-                              (string-match (string-append "^" directory "/[^/]*$")
+                           (lambda (file stat)
-                                            file))
+                             (string-match (string-append "^" directory "/[^/]*$")
-                            #:directories? #t))
+                                           file))
+                           #:directories? #t))
 
-              (let ((bin (string-append #$output "/bin"))
+             (let* ((out (assoc-ref outputs "out"))
-                     (lib (string-append #$output "/lib"))
+                    (bin (string-append out "/bin"))
-                     (share (string-append #$output "/share")))
+                    (lib (string-append out "/lib"))
-                (for-each (cut install-file <> bin)
+                    (share (string-append out "/share")))
-                          (list "linux-boot-prober" "os-prober"))
+               (for-each (cut install-file <> bin)
-                (install-file "newns" (string-append lib "/os-prober"))
+                         (list "linux-boot-prober" "os-prober"))
-                (install-file "common.sh" (string-append share "/os-prober"))
+               (install-file "newns" (string-append lib "/os-prober"))
-                (install-file "os-probes/mounted/powerpc/20macosx"
+               (install-file "common.sh" (string-append share "/os-prober"))
-                              (string-append lib "/os-probes/mounted"))
+               (install-file "os-probes/mounted/powerpc/20macosx"
-                (for-each
+                             (string-append lib "/os-probes/mounted"))
-                 (lambda (directory)
+               (for-each
-                   (for-each
+                (lambda (directory)
-                    (lambda (file)
+                  (for-each
-                      (let ((destination (string-append lib "/" directory
+                   (lambda (file)
-                                                        "/" (basename file))))
+                     (let ((destination (string-append lib "/" directory
-                        (mkdir-p (dirname destination))
+                                                       "/" (basename file))))
-                        (copy-recursively file destination)))
+                       (mkdir-p (dirname destination))
-                    (append (find-files-non-recursive (string-append directory "/common"))
+                       (copy-recursively file destination)))
-                            (find-files-non-recursive (string-append directory "/x86")))))
+                   (append (find-files-non-recursive (string-append directory "/common"))
-                 (list "linux-boot-probes"
+                           (find-files-non-recursive (string-append directory "/x86")))))
-                       "linux-boot-probes/mounted"
+                (list "os-probes" "os-probes/mounted" "os-probes/init"
-                       "os-probes"
+                      "linux-boot-probes" "linux-boot-probes/mounted"))))))))
-                       "os-probes/init"
+    (home-page "https://joeyh.name/code/os-prober")
-                       "os-probes/mounted"))))))))
-    (home-page "https://joeyh.name/code/os-prober/")
     (synopsis "Detect other operating systems")
     (description "os-prober probes disks on the system for other operating
 systems so that they can be added to the bootloader.  It also works out how to

gnu/packages/browser-extensions.scm

@@ -69,55 +69,6 @@ match website theme.")
 (define-public adaptive-tab-bar-colour/icecat
   (make-icecat-extension adaptive-tab-bar-colour))
 
-(define canvasblocker
-  (package
-    (name "canvasblocker")
-    (version "1.12")
-    (source
-     (origin
-       (method git-fetch)
-       (uri (git-reference
-             (url "https://github.com/kkapsner/CanvasBlocker")
-             (commit version)))
-       (file-name (git-file-name name version))
-       (sha256
-        (base32 "0xxs6s7nrl4y4qiw2cpkqh170mbv78n0ixd874a72jjvczw2vpg7"))
-       (modules '((guix build utils) (ice-9 match) (ice-9 ftw)))
-       (snippet
-        #~(begin
-            (for-each delete-file
-                      '("canvasblocker.xpi" "package-lock.json"))
-            ;; Delete all hidden files/directories except .tools.
-            (for-each
-             (match-lambda
-               ((or "." ".tools" ".."
-                    (? (lambda (name)
-                         (not (string-prefix? "." name)))))
-                #t)
-               ((? file-is-directory? dir)
-                (delete-file-recursively dir))
-               (file
-                (delete-file file)))
-             (scandir "."))))))
-    (build-system copy-build-system)
-    (properties '((addon-id . "CanvasBlocker@kkapsner.de")))
-    (arguments
-     (list
-      #:install-plan  ;deduced from .tools/build.js
-      #~'(("." #$(assq-ref properties 'addon-id)
-           #:exclude ("crowdin.yml" "package.json" "releaseNotes.txt")
-           #:exclude-regexp ("test/.*" "versions/.*" ".tools/*")))))
-    (home-page "https://github.com/kkapsner/CanvasBlocker")
-    (synopsis "Firefox extension to protect from being fingerprinted")
-    (description "This extension allows users to prevent websites from using
-some Javascript APIs to fingerprint them.  Users can choose to block the APIs
-entirely on some or all websites (which may break some websites) or just block
-or fake its fingerprinting-friendly readout API.")
-    (license license:mpl2.0)))
-
-(define-public canvasblocker/icecat
-  (make-icecat-extension canvasblocker))
-
 (define play-to-kodi
   (package
     (name "play-to-kodi")
@@ -312,7 +263,7 @@ fill and submit login forms if a matching password entry is found.")
 (define keepassxc-browser
   (package
     (name "keepassxc-browser")
-    (version "1.9.10")
+    (version "1.9.9.6")
     (source (origin
               (method git-fetch)
               (uri (git-reference
@@ -322,7 +273,7 @@ fill and submit login forms if a matching password entry is found.")
               (file-name (git-file-name name version))
               (sha256
                (base32
-                "18kgmdvsq1kv9px8a1m7i10r4m0iik72qlnw9k2ijxmn1xikfyfb"))
+                "1chw1y1332zn69s7kf5mkljc1bp2xfvl3zzvafnalv3zj2jsa5cs"))
 	      ;;  Default 'manifest.json' targets chromium based browsers and
 	      ;;  depends on background.service_worker support.
 	      ;;  See: <https://bugzilla.mozilla.org/show_bug.cgi?id=1573659>
@@ -377,15 +328,15 @@ with the @uref{https://keepassxc.org, KeePassXC} password manager.")
 (define noscript
   (package
     (name "noscript")
-    (version "13.6.19.1984")
+    (version "13.2.2")
     (source (origin
               (method url-fetch/zipbomb)
               (uri (string-append
-                    "https://archive.torproject.org/tor-package-archive/torbrowser/noscript/noscript-"
+                    "https://noscript.net/download/releases/noscript-" version
-                    version ".xpi"))
+                    ".xpi"))
               (sha256
                (base32
-                "1lb3855w34avs7idvycv8cfpjnpic2mnsh9yqkidrdw7msr0na74"))))
+                "0w2w0a76dk01bkh83mqwgs9ky02rjqk15z5sxg4a6mw0hpr81bpm"))))
     (build-system copy-build-system)
     (properties '((addon-id . "{73a6fe31-595d-460b-a920-fcc0f8843232}")))
     (arguments

gnu/packages/build-tools.scm

@@ -64,6 +64,7 @@
   #:use-module (gnu packages logging)
   #:use-module (gnu packages lua)
   #:use-module (gnu packages man)
+  #:use-module (gnu packages ninja)
   #:use-module (gnu packages package-management)
   #:use-module (gnu packages pcre)
   #:use-module (gnu packages perl)
@@ -76,7 +77,6 @@
   #:use-module (gnu packages python-crypto)
   #:use-module (gnu packages python-web)
   #:use-module (gnu packages python-xyz)
-  #:use-module (gnu packages compiler-tools)
   #:use-module (gnu packages regex)
   #:use-module (gnu packages rpc)
   #:use-module (gnu packages serialization)
@@ -94,6 +94,7 @@
   #:use-module (guix build-system hare)
   #:use-module (guix build-system meson)
   #:use-module (guix build-system pyproject)
+  #:use-module (guix build-system python)
   #:use-module (guix build-system trivial)
   #:use-module (guix deprecation)
   #:use-module (guix download)
@@ -104,8 +105,7 @@
   #:use-module (guix packages)
   #:use-module (guix search-paths)
   #:use-module (guix utils)
-  #:use-module (ice-9 optargs)
+  #:use-module (ice-9 optargs))
-  #:use-module (srfi srfi-1))
 
 (define-public acr
   (package
@@ -275,14 +275,14 @@ generate such a compilation database.")
 (define-public bmake
   (package
     (name "bmake")
-    (version "20260508")
+    (version "20260313")
     (source
      (origin
        (method url-fetch)
        (uri (string-append
              "http://www.crufty.net/ftp/pub/sjg/bmake-" version ".tar.gz"))
        (sha256
-        (base32 "0b58j7l53jbqaxcfggimdbylf71hbyfm44m6s4646ry7mf8fl7kv"))
+        (base32 "0xgryknmv625idw37rq89mpl5rymwdb15j5w8zxwy1gf8b6z7j3n"))
        (patches (search-patches "bmake-run-check-separately.patch"))))
     (build-system gnu-build-system)
     (inputs
@@ -432,8 +432,9 @@ files and generates build instructions for the Ninja build system.")
     (arguments
      (list
       #:tests? #f                       ;disabled to avoid extra dependencies
-      ;; Custom build steps to prevent using pyproject-build-system which
+      ;; Essentially a lighter copy of the former python-build-system.
-      ;; allows to edit the latter without a C++ world rebuild.
+      ;; Using it rather than pyproject-build-system allows to edit the latter
+      ;; without a C++ world rebuild.
       #:phases
       #~(modify-phases %standard-phases
           (delete 'bootstrap)
@@ -1451,147 +1452,3 @@ It is an alternative to e.g. @command{make(1)} and @command{redo(1)}.  Features:
 @end itemize
 ")
     (license license:wtfpl2)))
-
-(define-public xmake
-  (package
-   (name "xmake")
-   (version "3.0.8")
-   (source (origin
-       (method git-fetch)
-       (uri (git-reference
-             (url "https://github.com/xmake-io/xmake.git")
-             (commit (string-append "v" version))
-             ;; Requires some dependencies from "xmake-core-*" repos
-             (recursive? #t)))
-       (file-name (git-file-name name version))
-       (sha256
-        (base32 "1pdjz52w9lzfbcpx9wmzy0bsjg7i19xz43f63czk7jz9v0xba6gi"))))
-   (build-system gnu-build-system)
-   (arguments
-    (list
-     ;; No check rule in make
-     ;; TODO: find how to run Lua tests in "test" directory
-     #:tests? #f))
-   (home-page "https://xmake.io/")
-   (synopsis "Cross-platform build utility based on Lua")
-   (description "@command{xmake} is a cross-platform build utility based on Lua.
-Features:
-@itemize
-@item Built-in caching and parallel compilation,
-@item Concise Lua syntax,
-@item Custom rules, plugins and modules,
-@item Support for C++20 modules and compile_commands.json,
-@item Support for languages outside C/C++ (e.g. Go, Rust, Zig).
-@end itemize")
-   (license license:asl2.0)))
-
-(define-public ninja/pinned
-  (hidden-package
-   (package
-     (name "ninja")
-     (version "1.13.2")
-     (source (origin
-               (method git-fetch)
-               (uri (git-reference
-                     (url "https://github.com/ninja-build/ninja")
-                     (commit (string-append "v" version))))
-               (file-name (git-file-name name version))
-               (sha256
-                (base32
-                 "0lp9dmxbjyjwv089i8mgq3nvnhpbnsn01ifm05m9s47w7cifrl8g"))))
-     (build-system gnu-build-system)
-     (inputs (list python-wrapper re2c))
-     (arguments
-      '(; Tests now require googletest, which is a circular dependency.
-        #:tests? #f
-        #:phases
-        (modify-phases %standard-phases
-          (replace 'configure
-            (lambda _
-              (substitute* "src/subprocess-posix.cc"
-                (("/bin/sh") (which "sh")))
-              (substitute* "src/subprocess_test.cc"
-                (("/bin/echo") (which "echo")))))
-          (replace 'build
-            (lambda _
-              (invoke "./configure.py" "--bootstrap")))
-          (replace 'check
-            (lambda* (#:key tests? #:allow-other-keys)
-              (when tests?
-                (invoke "./configure.py")
-                (invoke "./ninja" "ninja_test")
-                (invoke "./ninja_test"))))
-          (replace 'install
-            (lambda* (#:key outputs #:allow-other-keys)
-              (let* ((out (assoc-ref outputs "out"))
-                     (bin (string-append out "/bin"))
-                     (doc (string-append out "/share/doc/ninja")))
-                (install-file "ninja" bin)
-                (install-file "doc/manual.asciidoc" doc)))))))
-     (home-page "https://ninja-build.org/")
-     (synopsis "Small build system")
-     (description
-      "Ninja is a small build system with a focus on speed.  It differs from
-other build systems in two major respects: it is designed to have its input
-files generated by a higher-level build system, and it is designed to run
-builds as fast as possible.")
-    (license license:asl2.0))))
-
-(define-public ninja
-  (package/inherit ninja/pinned
-    (properties (alist-delete 'hidden? (package-properties ninja/pinned)))))
-
-(define-public samurai
-  (package
-    (name "samurai")
-    (version "1.2")
-    (source (origin
-              (method git-fetch)
-              (uri (git-reference
-                    (url "https://github.com/michaelforney/samurai")
-                    (commit version)))
-              (file-name (git-file-name name version))
-              (sha256
-               (base32
-                "04iw18hgkm72yrl83a2xh1jc47w9rilpb95kwick0j37b4q3gxj4"))))
-    (build-system gnu-build-system)
-    (arguments
-     (list #:tests? #f                  ;no test suite
-           #:make-flags #~(list (string-append "CC=" #$(cc-for-target))
-                                (string-append "PREFIX=" #$output))
-           #:phases #~(modify-phases %standard-phases
-                        (add-after 'unpack 'patch-/bin/sh
-                          (lambda* (#:key inputs #:allow-other-keys)
-                            (substitute* "build.c"
-                              (("/bin/sh")
-                               (search-input-file inputs "bin/sh")))))
-                        (delete 'configure))))
-    (inputs (list bash-minimal))
-    (home-page "https://github.com/michaelforney/samurai")
-    (synopsis "Ninja-compatible build tool written in C")
-    (description "@code{samurai} is a ninja-compatible build tool written in
-C99 with a focus on simplicity, speed, and portability.  It is
-feature-complete and supports most of the same options as ninja.  This package
-provides the command @command{samu}.  For a @command{ninja} command
-replacement, use the @code{samu-as-ninja-wrapper} package.")
-    (license (list license:asl2.0               ;for the most part
-                   license:expat))))            ;htab.h, htab.c and tree.c
-
-(define-public samu-as-ninja-wrapper
-  (package/inherit samurai
-    (name "samu-as-ninja-wrapper")
-    (build-system trivial-build-system)
-    (arguments
-     (list #:builder
-           (with-imported-modules '((guix build utils))
-             #~(begin
-                 (use-modules (guix build utils))
-                 (let ((bindir (string-append #$output "/bin"))
-                       (samu (string-append #$(this-package-input "samurai")
-                                            "/bin/samu")))
-                   (mkdir-p bindir)
-                   (symlink samu (string-append bindir "/ninja")))))))
-    (inputs (list samurai))
-    (description "This package provides the @command{ninja} command,
-implemented as a symbolic link to the @command{samu} command of @code{samurai}
-package.")))

gnu/packages/c.scm

@@ -23,7 +23,7 @@
 ;;; Copyright © 2023, 2024 David Elsing <david.elsing@posteo.net>
 ;;; Copyright @ 2022, Kitzman <kitzman@disroot.org>
 ;;; Copyright @ 2025 Dariqq <dariqq@posteo.net>
-;;; Copyright © 2025, 2026 Ashish SHUKLA <ashish.is@lostca.se>
+;;; Copyright © 2025 Ashish SHUKLA <ashish.is@lostca.se>
 ;;; Copyright © 2026 Cayetano Santos <csantosb@inventati.org>
 ;;; Copyright © 2026 Sharlatan Hellseher <sharlatanus@gmail.com>
 ;;;
@@ -47,7 +47,6 @@
   #:use-module (guix gexp)
   #:use-module (guix utils)
   #:use-module (guix packages)
-  #:use-module (guix deprecation)
   #:use-module (guix download)
   #:use-module (guix git-download)
   #:use-module (guix build-system cmake)
@@ -55,6 +54,7 @@
   #:use-module (guix build-system gnu)
   #:use-module (guix build-system meson)
   #:use-module (guix build-system pyproject)
+  #:use-module (guix build-system python)
   #:use-module (guix store)
   #:use-module (gnu packages)
   #:use-module (gnu packages bash)
@@ -62,7 +62,7 @@
   #:use-module (gnu packages bootstrap)
   #:use-module (gnu packages bison)
   #:use-module (gnu packages check)
-  #:use-module (gnu packages compiler-tools)
+  #:use-module (gnu packages flex)
   #:use-module (gnu packages gawk)
   #:use-module (gnu packages gcc)
   #:use-module (gnu packages perl)
@@ -81,7 +81,6 @@
   #:use-module (gnu packages autotools)
   #:use-module (gnu packages gettext)
   #:use-module (gnu packages pkg-config)
-  #:use-module (gnu packages sqlite)
   #:use-module (gnu packages tls)
   #:use-module (gnu packages web)
   #:use-module (gnu packages xml))
@@ -1094,8 +1093,32 @@ portability.")
     (license (list license:bsd-2        ;all files except...
                    license:bsd-3))))    ;...the unidef.1 manual page
 
-(define-deprecated/public-alias byacc
+(define-public byacc
-  (@ (gnu packages compiler-tools) byacc))
+  (package
+    (name "byacc")
+    (version "20240109")
+    (source (origin
+             (method url-fetch)
+             (uri (string-append
+                   "https://invisible-mirror.net/archives/byacc/byacc-"
+                   version ".tgz"))
+             (sha256
+              (base32
+               "0il4w1vwbglayakywyghiqhcjpg1yvv5ww2p8ylz32bi05wpg2gj"))
+             (snippet
+              #~(begin (delete-file "btyaccpar.c")
+                       (delete-file "yaccpar.c")))))
+    (native-inputs
+     (list gawk))
+    (build-system gnu-build-system)
+    (home-page "https://invisible-island.net/byacc/byacc.html")
+    (synopsis "Berkeley Yacc LALR parser generator")
+    (description
+     "Berkeley Yacc is an LALR(1) parser generator.  Yacc reads the grammar
+specification from a file and generates an LALR(1) parser for it.  The parsers
+consist of a set of LALR(1) parsing tables and a driver routine written in the
+C programming language.")
+    (license license:public-domain)))
 
 (define-public argparse
   (package
@@ -1304,6 +1327,25 @@ for the @acronym{AWS,Amazon Web Services} SDK.")
     (home-page "https://github.com/awslabs/aws-c-sdkutils")
     (license license:asl2.0)))
 
+(define-public pcl
+  (package
+    (name "pcl")
+    (version "1.12")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (string-append
+              "http://www.xmailserver.org/pcl-" version ".tar.gz"))
+       (sha256
+        (base32
+         "06ly65rq4iyj2p4704i215c8y4rgspwl8sxfaifmf4ahfr30bcz7"))))
+    (build-system gnu-build-system)
+    (home-page "http://www.xmailserver.org/libpcl.html")
+    (synopsis "Portable Coroutine Library")
+    (description "The @acronym{PCL, Portable Coroutine Library} implements the
+low level functionality for coroutines.")
+    (license license:gpl2+)))
+
 (define-public aws-c-http
   (package
     (name "aws-c-http")
@@ -1477,48 +1519,6 @@ Telemetry Transport (MQTT) publish-subscribe messaging protocol.")
     (home-page "https://microsoft.github.io/mimalloc/")
     (license license:expat)))
 
-(define-public mps
-  (package
-    (name "mps")
-    (version "1.118.0")
-    (source
-     (origin
-       (method git-fetch)
-       (uri (git-reference
-             (url "https://github.com/Ravenbrook/mps")
-             (commit (string-append "release-" version))))
-       (file-name (git-file-name name version))
-       (sha256
-        (base32 "078iv3fsz0dnfwb7g63apkvcksczbqfxrxm73k80jwnwca6pgafy"))))
-    (build-system gnu-build-system)
-    (arguments
-     (list
-      #:phases
-      #~(modify-phases %standard-phases
-          (add-after 'unpack 'patch-cflags
-            ;; The recursive make call in the test suite doesn't pass CFLAGS
-            ;; down properly so we need to do it ourselves
-            (lambda _
-              (substitute* "Makefile.in"
-                (("CFLAGS=\"(.*)\"" _ flags)
-                 (string-append "CFLAGS=\"" flags " $(CFLAGS)\""))))))
-      #:parallel-build? #f ;Parallel build fails
-      #:test-target "test"
-      #:make-flags
-      #~(list "CFLAGS=-Wno-error=dangling-pointer -Wno-maybe-uninitialized"
-              ;; These flags are needed for the recursive make calls in testing
-              (string-append "CC=" #$(cc-for-target)) "-j" "1")))
-    (inputs (list sqlite))
-    (home-page "http://www.ravenbrook.com/project/mps")
-    (synopsis "Memory pool system")
-    (description
-     "This package provides a cross-platform memory management system.  It
-permits the flexible combination of memory management techniques, supporting
-manual and automatic memory management, in-line allocation, finalization,
-weakness, and multiple concurrent co-operating incremental generational
-garbage collections.  It also includes a library of memory pool classes
-implementing specialized memory management policies.")
-    (license license:bsd-2)))
 ;;; The package is named orangeduck-mpc to differentiate it from GNU mpc.
 (define-public orangeduck-mpc
   ;; The last release lacks an 'install' target.
@@ -1762,7 +1762,7 @@ string.h, but with a utf8* prefix instead of the str* prefix.")
 (define-public simdutf
   (package
     (name "simdutf")
-    (version "9.0.0")
+    (version "7.7.1")
     (source
      (origin
        (method git-fetch)
@@ -1771,7 +1771,7 @@ string.h, but with a utf8* prefix instead of the str* prefix.")
              (commit (string-append "v" version))))
        (file-name (git-file-name name version))
        (sha256
-        (base32 "0f5ccvqj7pfa69m9y1kxp2v1lybx6x8i9pykdqfkr7dydqbhrhx6"))))
+        (base32 "0kw4j4qqcfjaii667xa745pklj50m70nqq8cj5agj714acczbk7y"))))
     (build-system cmake-build-system)
     (arguments (list #:configure-flags #~(list "-DBUILD_SHARED_LIBS=ON")))
     (synopsis "SIMD Unicode validation and transcoding")

gnu/packages/calendar.scm

@@ -45,6 +45,7 @@
   #:use-module (guix build-system go)
   #:use-module (guix build-system cmake)
   #:use-module (guix build-system pyproject)
+  #:use-module ((guix build-system python) #:select (pypi-uri))
   #:use-module (gnu packages admin)
   #:use-module (gnu packages autotools)
   #:use-module (gnu packages base)

gnu/packages/cdrom.scm

@@ -52,7 +52,7 @@
   #:use-module (gnu packages bash)
   #:use-module (gnu packages bison)
   #:use-module (gnu packages compression)
-  #:use-module (gnu packages compiler-tools)
+  #:use-module (gnu packages flex)
   #:use-module (gnu packages fontutils)
   #:use-module (gnu packages gettext)
   #:use-module (gnu packages docbook)
@@ -337,7 +337,7 @@ reconstruction capability.")
 (define-public cdrdao
   (package
     (name "cdrdao")
-    (version "1.2.6")
+    (version "1.2.5")
     (source
      (origin
        (method git-fetch)
@@ -347,18 +347,30 @@ reconstruction capability.")
               (string-append "rel_" (string-replace-substring version "." "_")))))
        (file-name (git-file-name name version))
        (sha256
-        (base32 "0hb8dfb88zk01yk5nfl8m5hsg4x2scb2899pxb717zywznr8jijw"))))
+        (base32 "1hh1lm4wr1vhsq2brczn94h88h3bppvjidj9cfqkl20jhaj38968"))))
-    (build-system glib-or-gtk-build-system)
+    (build-system gnu-build-system)
     (arguments
-     (list
+     '(#:configure-flags
-      #:configure-flags
+       (list
-      #~(list
+        ;; GCDMaster depends on obsolete libgnomeuimm, see
-         ;; Use the native SCSI interface.
+        ;; <https://github.com/cdrdao/cdrdao/issues/3>.
-         "--without-scglib")))
+        "--without-gcdmaster"
+        ;; Use the native SCSI interface.
+        "--without-scglib")
+       #:phases
+       (modify-phases %standard-phases
+         (add-before 'bootstrap 'fix-configure.ac
+           (lambda _
+             ;; Remove references to missing macros.
+             (substitute* "configure.ac"
+              (("^AM_GCONF_SOURCE_2.*") "")
+              ;; This was introduced in autoconf-2.70, but is described
+              ;; as usually not needed in the autoconf documentation.
+              (("^AC_CHECK_INCLUDES_DEFAULT") "")))))))
     (native-inputs
-     (list autoconf-2.72 automake `(,glib "bin") pkg-config))
+     (list autoconf automake pkg-config))
     (inputs
-     (list ao gtkmm-3 lame libmad libsigc++-2 libvorbis))
+     (list ao lame libmad libvorbis))
     (home-page "https://cdrdao.sourceforge.net")
     (synopsis "Read and write CDs in disk-at-once mode")
     (description "cdrdao records audio or data CDs in disk-at-once (DAO) mode,

gnu/packages/check.scm

@@ -131,6 +131,7 @@
   #:use-module (guix build-system meson)
   #:use-module (guix build-system perl)
   #:use-module (guix build-system pyproject)
+  #:use-module (guix build-system python)
   #:use-module (guix build-system trivial)
   #:use-module (ice-9 match)
   #:use-module (srfi srfi-1))
@@ -1881,6 +1882,7 @@ http server.")
     (arguments (list #:tests? #false)) ;no tests included
     (native-inputs
      (list python-pytest
+           python-pytest-cov
            python-setuptools
            python-wheel
            python-xmlschema))
@@ -1913,6 +1915,42 @@ XML output")
 decorators from external files.")
     (license license:expat)))
 
+(define-public python-pytest-random-order
+  (package
+    (name "python-pytest-random-order")
+    (version "1.1.1")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (pypi-uri "pytest-random-order" version))
+       (sha256
+        (base32 "104hww3b86jchk41kjhyycr541pd2dfgqkww6lx5y70z9z9xfwj4"))))
+    (build-system pyproject-build-system)
+    (arguments
+     (list
+      #:test-flags
+      ;; AttributeError: module 'py' has no attribute 'code'.
+      #~(list "-k" (string-append "not test_it_works_with_actual_tests"
+                                  " and not test_failed_first"
+                                  " and not test_doctests"))))
+    (native-inputs
+     (list python-pytest-xdist
+           python-setuptools
+           python-py
+           python-wheel))
+    (propagated-inputs
+     (list python-pytest))
+    (home-page "https://github.com/jbasko/pytest-random-order")
+    (synopsis "Pytest plugin to randomize the order of tests")
+    (description "@code{pytest-random-order} is a Pytest plugin that
+randomizes the order of tests.  This can be useful to detect a test that
+passes just because it happens to run after an unrelated test that leaves the
+system in a favourable state.  The plugin allows user to control the level of
+randomness they want to introduce and to disable reordering on subsets of
+tests.  Tests can be rerun in a specific order by passing a seed value
+reported in a previous test run.")
+    (license license:expat)))
+
 (define-public python-pytest-runner
   (package
     (name "python-pytest-runner")
@@ -2695,11 +2733,7 @@ failures and errors instantly.")
                      "test_is_not_identity"
                      "test_resolves_builtin_types[object]"
                      "test_resolves_forwardrefs_to_builtin_types[object]"
-                     "test_timezone_lookup[tzinfo]"
+                     "test_timezone_lookup[tzinfo]")
-                     ;; hypothesis.errors.FailedHealthCheck: Input generation is slow
-                     #$@(if (target-riscv64?)
-                            '("test_can_run_with_no_db")
-                            '()))
                " and not "))
       #:phases
       #~(modify-phases %standard-phases
@@ -2922,8 +2956,12 @@ mypy plugins.")
                            "and not upstream_url"))))
     (native-inputs
      (list python-pytest
+           python-pytest-black
            python-pytest-checkdocs
+           python-pytest-cov
            python-pytest-enabler
+           python-pytest-flake8
+           python-pytest-mypy
            python-setuptools
            python-wheel))
     (propagated-inputs
@@ -3030,28 +3068,21 @@ possible to write plugins to add your own checks.")
 (define-public behave
   (package
     (name "behave")
-    ;; 1.3.3 (2025-09-04), the latest changes provide support for Python
+    (version "1.3.3")
-    ;; 3.12+; move back to git tag when released.
-    (properties '((commit . "43d0a93240c0b25b0cbf59bdc196b74fb8a2353e")
-                  (revision . "0")))
-    (version (git-version "1.3.3"
-                          (assoc-ref properties 'revision)
-                          (assoc-ref properties 'commit)))
     (source
      (origin
        (method git-fetch)
        (uri (git-reference
               (url "https://github.com/behave/behave")
-              (commit (assoc-ref properties 'commit))))
+              (commit (string-append "v" version))))
        (file-name (git-file-name name version))
        (sha256
-        (base32 "05671jf7scpgqr8chzgs9bxidvf12nlkqqiqxa5qwmykqfvc8nk4"))))
+        (base32 "1fxj51kailsdakqi7qbw700k258n7r3lv75mgxs45ld5xh2jfyxh"))))
     (build-system pyproject-build-system)
-    ;; tests: 1638 passed, 3 skipped, 2 xfailed
     (native-inputs
-     (list python-chardet
+     (list python-assertpy
-           python-freezegun
+           python-chardet
-           python-charset-normalizer
+           python-mock
            python-path
            python-pyhamcrest
            python-pytest
@@ -3100,7 +3131,7 @@ time by mocking the datetime module.")
 (define-public python-flaky
   (package
     (name "python-flaky")
-    (version "3.8.1")  ; On bump, remove some skipped tests in python-cherrypy.
+    (version "3.8.1")
     (source (origin
               (method url-fetch)
               (uri (pypi-uri "flaky" version))
@@ -3688,6 +3719,30 @@ system.  The code under test requires no modification to work with pyfakefs.")
 directories and files.")
     (license license:expat)))
 
+(define-public python-pytest-tornado5
+  (package
+    (name "python-pytest-tornado5")
+    (version "2.0.0")
+    (source (origin
+              (method url-fetch)
+              (uri (pypi-uri "pytest-tornado5" version))
+              (sha256
+               (base32
+                "0qb62jw2w0xr6y942yp0qxiy755bismjfpnxaxjjm05gy2pymr8d"))))
+    (build-system pyproject-build-system)
+    (arguments
+     ;; Tests require pytest < 6
+     (list #:tests? #f))
+    (propagated-inputs (list python-pytest python-tornado))
+    (native-inputs (list python-setuptools python-wheel))
+    (home-page "https://github.com/vidartf/pytest-tornado")
+    (synopsis
+     "Fixtures and markers to simplify testing of Tornado applications")
+    (description
+     "This package provides a @code{py.test} plugin supplying fixtures and
+markers to simplify testing of asynchronous tornado applications.")
+    (license license:asl2.0)))
+
 (define-public guile-proba
   (package
     (name "guile-proba")

gnu/packages/chemistry.scm

@@ -28,6 +28,7 @@
   #:use-module (guix build-system cmake)
   #:use-module (guix build-system gnu)
   #:use-module (guix build-system pyproject)
+  #:use-module (guix build-system python)
   #:use-module (guix download)
   #:use-module (guix gexp)
   #:use-module (guix git-download)
@@ -46,7 +47,7 @@
   #:use-module (gnu packages compression)
   #:use-module (gnu packages cpp)
   #:use-module (gnu packages documentation)
-  #:use-module (gnu packages compiler-tools)
+  #:use-module (gnu packages flex)
   #:use-module (gnu packages fonts)
   #:use-module (gnu packages fontutils)
   #:use-module (gnu packages fortran-xyz)
@@ -579,7 +580,7 @@ stored with user-specified precision.")
            python-sphinx))
     (inputs
      (list fftwf
-           `(,hwloc "lib")
+           `(,hwloc-2 "lib")
            libtirpc
            lmfit
            muparser

gnu/packages/chez.scm

@@ -302,7 +302,7 @@ will name the threaded machine type unless THREADS? is provided as #f."
     (name "chez-scheme-for-racket")
     ;; The version should match `(scheme-version #t)`.
     ;; See s/cmacros.ss c. line 360.
-    (version "10.4.0-pre-release.1-1") ; expect a chez-nanopass-bootstrap update
+    (version "10.3.0-pre-release.2") ; expect a chez-nanopass-bootstrap update
     (source #f)
     (build-system gnu-build-system)
     (inputs `(,@(if (nix-system->native-chez-machine-type)
@@ -507,7 +507,7 @@ version of Chez Scheme.")
     (name "chez-scheme")
     ;; The version should match `(scheme-version-number #t)`.
     ;; See s/cmacros.ss c. line 360.
-    (version "10.4.0") ; expect a chez-nanopass-bootstrap update
+    (version "10.2.0") ; expect a chez-nanopass-bootstrap update
     (source (origin
               (method git-fetch)
               (uri (git-reference
@@ -515,7 +515,7 @@ version of Chez Scheme.")
                     (commit (string-append "v" version))))
               (sha256
                (base32
-                "079vlkl27qdvsg1rsynmd828m42n98c2dnldkhsxf2slfsqd9kv5"))
+                "14iv4kfkyvrkigr1n2prf71n2l3vs0sf0549rvh6y4x2faa2l329"))
               (file-name (git-file-name name version))
               (patches (search-patches "chez-scheme-bin-sh.patch"))
               (snippet #~(begin
@@ -840,9 +840,9 @@ User's Guix}, among other documents.")
 (define-public chez-nanopass-bootstrap
   (hidden-package
    (package
-     (name "chez-nanopass-bootstrap")
+     (name "chez-nanopass")
-     (version "1.9.4")
+     (version "1.9.2")
-     (properties '((chez-nanopass-release-date . "December 29, 2025")))
+     (properties `((chez-nanopass-release-date . "October 18, 2020")))
      (source
       (origin
         (method git-fetch)
@@ -850,7 +850,7 @@ User's Guix}, among other documents.")
               (url "https://github.com/nanopass/nanopass-framework-scheme")
               (commit (string-append "v" version))))
         (sha256
-         (base32 "1qq0vnbrvcialgjgnblfq3qp1ilqg94h0kg896ksd9v4g7ipj9v0"))
+         (base32 "16vjsik9rrzbabbhbxbaha51ppi3f9n8rk59pc6zdyffs0vziy4i"))
         (file-name (git-file-name "nanopass-framework-scheme" version))
         (snippet
          #~(begin
@@ -929,9 +929,10 @@ create compilers, making them easier to understand and maintain.")
 (define-public chez-nanopass
   (package
     (inherit chez-nanopass-bootstrap)
-    (name "chez-nanopass")
+    ;; This release has a significant bug fix.  Expect the next releases of
-    (version "1.9.4")
+    ;; chez-scheme{,-for-racket} to want this for chez-nanopass-bootstrap.
-    (properties '((chez-nanopass-release-date . "December 29, 2025")))
+    (version "1.9.3")
+    (properties '((chez-nanopass-release-date . "August 24, 2025")))
     (source
      (let ((bootstrap-origin (package-source chez-nanopass-bootstrap)))
        (origin
@@ -940,7 +941,7 @@ create compilers, making them easier to understand and maintain.")
                 (url (git-reference-url (origin-uri bootstrap-origin)))
                 (commit (string-append "v" version))))
          (sha256
-          (base32 "1qq0vnbrvcialgjgnblfq3qp1ilqg94h0kg896ksd9v4g7ipj9v0"))
+          (base32 "0757x3a3b4kcd3jk52h4ikqzv7cc1mvphlw592f0r5pz99bkxiin"))
          (file-name (git-file-name "nanopass-framework-scheme" version)))))
     (native-inputs (list chez-scheme stex))))
 

gnu/packages/chicken.scm

@@ -20,113 +20,65 @@
 
 (define-module (gnu packages chicken)
   #:use-module (gnu packages)
-  #:use-module (gnu packages bash)
-  #:use-module (guix gexp)
   #:use-module (guix packages)
-  #:use-module (guix utils)
   #:use-module (guix build-system chicken)
   #:use-module (guix build-system gnu)
   #:use-module (guix download)
   #:use-module (guix git-download)
   #:use-module (guix svn-download)
   #:use-module ((guix licenses)
-                #:prefix license:)
+                #:prefix license:))
-  #:use-module (srfi srfi-1))
 
-;; This package is build from pre-built C source code, provided in the CHICKEN
-;; release tarball.  Based on this bootstrap compiler, we build CHICKEN from
-;; the Scheme source, thus enabling us to (at least) patch it.
-;;
-;; See <https://issues.guix.gnu.org/22366>.
-(define-public chicken-bootstrap
-  (hidden-package
-   (package
-     (name "chicken-bootstrap")
-     (version "5.4.0")
-     (source (origin
-               (method url-fetch)
-               (uri (string-append "https://code.call-cc.org/releases/"
-                                   version "/chicken-" version ".tar.gz"))
-               (sha256
-                (base32
-                 "0pzcrnzkjw2sa44vy59wbygvlc3nva8zisprkdnvyrqi3jk4lp9w"))))
-     (build-system gnu-build-system)
-     (arguments
-      `(#:modules ((guix build gnu-build-system)
-                   (guix build utils)
-                   (srfi srfi-1))
-
-        ;; No `configure' script; run "make check" after "make install" as
-        ;; prescribed by README.
-        #:phases
-        (modify-phases %standard-phases
-          (delete 'configure)
-          (delete 'check)
-          (add-after 'install 'check
-            (assoc-ref %standard-phases 'check)))
-
-        #:make-flags (let ((out (assoc-ref %outputs "out")))
-                       (list "PLATFORM=linux"
-                             (string-append "PREFIX=" out)
-                             (string-append "VARDIR=" out "/var/lib")))
-
-        ;; Parallel builds are not supported, as noted in README.
-        #:parallel-build? #f))
-     (native-search-paths
-      (list (search-path-specification
-             (variable "CHICKEN_REPOSITORY_PATH")
-             ;; TODO extract binary version into a module level definition.
-             (files (list "var/lib/chicken/11")))))
-     ;; Reference gcc-toolchain lazily to avoid circular module dependency
-     ;; problems.
-     (propagated-inputs (list (module-ref (resolve-interface
-                                           '(gnu packages commencement))
-                                          'gcc-toolchain)))
-     (home-page "https://www.call-cc.org/")
-     (synopsis "R5RS Scheme implementation that compiles native code via C")
-     (description
-      "CHICKEN is a compiler for the Scheme programming language.  CHICKEN
-pr oduces portable and efficient C, supports almost all of the R5RS Scheme
-la nguage standard, and includes many enhancements and extensions.")
-     (license license:bsd-3))))
-
-;; The CHICKEN compiler is itself written in CHICKEN, the CHICKEN release
-;; tarballs includes auto-generated C code to mitigate the compiler
-;; bootstrapping problem.  To be able to patch the original Scheme source,
-;; we compile from this Scheme source here using the chicken-bootstrap
-;; compiler obtained from the autogenerated C code.
-;;
-;; See <https://issues.guix.gnu.org/22366>.
 (define-public chicken
   (package
-    (inherit chicken-bootstrap)
     (name "chicken")
+    (version "5.4.0")
+    (source (origin
+              (method url-fetch)
+              (uri (string-append "https://code.call-cc.org/releases/"
+                                  version "/chicken-" version ".tar.gz"))
+              (sha256
+               (base32
+                "0pzcrnzkjw2sa44vy59wbygvlc3nva8zisprkdnvyrqi3jk4lp9w"))))
+    (build-system gnu-build-system)
     (arguments
-     (substitute-keyword-arguments (package-arguments chicken-bootstrap)
+     `(#:modules ((guix build gnu-build-system)
-       ((#:phases phases)
+                  (guix build utils)
-        #~(modify-phases #$phases
+                  (srfi srfi-1))
-            ;; CHICKEN contains auto-generated C code, remove it and
+
-            ;; compile from the Scheme source using chicken-bootstrap.
+       ;; No `configure' script; run "make check" after "make install" as
-            (add-after 'unpack 'remove-auto-generated-code
+       ;; prescribed by README.
-              (lambda _
+       #:phases
-                (invoke "make" "spotless")))
+       (modify-phases %standard-phases
-            ;; Invoke commands by name, not by path.
+         (delete 'configure)
-            ;;
+         (delete 'check)
-            ;; See <https://codeberg.org/guix/guix/issues/8471>.
+         (add-after 'install 'check
-            (add-after 'unpack 'fix-paths
+           (assoc-ref %standard-phases 'check)))
-              (lambda* (#:key inputs #:allow-other-keys)
+
-                (let ((sh (search-input-file inputs "/bin/sh"))
+       #:make-flags (let ((out (assoc-ref %outputs "out")))
-                      (cp (search-input-file inputs "/bin/cp")))
+                      (list "PLATFORM=linux"
-                  (substitute* "egg-compile.scm"
+                            (string-append "PREFIX=" out)
-                    (("/bin/sh") sh)
+                            (string-append "VARDIR=" out "/var/lib")))
-                    (("\"cp\"") (string-append "\"" cp "\"")))
+
-                  (substitute* "posixunix.scm"
+       ;; Parallel builds are not supported, as noted in README.
-                    (("/bin/sh") sh))
+       #:parallel-build? #f))
-                  (substitute* "chicken-install.scm"
+    (native-search-paths
-                    (("\"sh \"") (string-append "\"" sh " \""))))))))))
+     (list (search-path-specification
-    (inputs (list chicken-bootstrap))
+            (variable "CHICKEN_REPOSITORY_PATH")
-    (properties
+            ;; TODO extract binary version into a module level definition.
-     (alist-delete 'hidden? (package-properties chicken-bootstrap)))))
+            (files (list "var/lib/chicken/11")))))
+    ;; Reference gcc-toolchain lazily to avoid circular module dependency
+    ;; problems.
+    (propagated-inputs (list (module-ref (resolve-interface
+                                          '(gnu packages commencement))
+                                         'gcc-toolchain)))
+    (home-page "https://www.call-cc.org/")
+    (synopsis "R5RS Scheme implementation that compiles native code via C")
+    (description
+     "CHICKEN is a compiler for the Scheme programming language.  CHICKEN
+produces portable and efficient C, supports almost all of the R5RS Scheme
+language standard, and includes many enhancements and extensions.")
+    (license license:bsd-3)))
 
 (define-public chicken-compile-file
   (package

gnu/packages/chromium.scm

@@ -53,6 +53,7 @@
   #:use-module (gnu packages llvm)
   #:use-module (gnu packages kerberos)
   #:use-module (gnu packages maths)
+  #:use-module (gnu packages ninja)
   #:use-module (gnu packages node)
   #:use-module (gnu packages nss)
   #:use-module (gnu packages pciutils)
@@ -78,9 +79,12 @@
   '("base/third_party/cityhash" ;Expat
     "base/third_party/double_conversion" ;BSD-3
     "base/third_party/icu" ;Unicode, X11-style
+    "base/third_party/nspr" ;MPL-2.0
     "base/third_party/superfasthash" ;BSD-3
     "base/third_party/symbolize" ;BSD-3
     "base/third_party/xdg_user_dirs" ;Expat
+    "buildtools/third_party/libc++" ;BSD
+    "buildtools/third_party/libc++abi" ;BSD
     "net/third_party/mozilla_security_manager" ;MPL-1.1/GPL2+/LGPL2.1+
     "net/third_party/quiche" ;BSD-3
     "net/third_party/uri_template" ;ASL2.0
@@ -218,6 +222,7 @@
     "third_party/libaom/source/libaom/third_party/fastfeat" ;BSD-3
     "third_party/libaom/source/libaom/third_party/vector" ;Expat
     "third_party/libaom/source/libaom/third_party/x86inc" ;ISC
+    "third_party/libc++" ;Expat
     "third_party/libdrm" ; Expat
     "third_party/libgav1" ;ASL2.0
     "third_party/libjingle_xmpp" ;BSD-3
@@ -243,6 +248,8 @@
     "third_party/libzip" ;BSD-3
     "third_party/lit" ;BSD-3
     "third_party/lit/v3_0" ;BSD-3
+    "third_party/llvm-libc" ;ASL2.0
+    "third_party/llvm-libc/src/shared" ;ASL2.0
     "third_party/lottie" ;Expat
     "third_party/lss" ;BSD-3
     "third_party/lzma_sdk" ;public domain
@@ -393,7 +400,7 @@
   ;; run the Blink performance tests, just remove everything to save ~70MiB.
   '("third_party/blink/perf_tests"))
 
-(define %chromium-version "147.0.7727.137")
+(define %chromium-version "147.0.7727.55")
 (define %ungoogled-revision (string-append %chromium-version "-1"))
 (define %debian-revision (string-append "debian/" %ungoogled-revision))
 
@@ -405,7 +412,7 @@
     (file-name (git-file-name "ungoogled-chromium" %ungoogled-revision))
     (sha256
      (base32
-      "1ha84j3zckdv2l8dpicqhmr6a8mq3bqwalw0bmgamvlmns9i7nrj"))))
+      "0l6v4wf16067igawjlh90f3d287mkw0cq4j5lvrxxy17y1skynzc"))))
 
 (define %debian-origin
   (origin
@@ -418,7 +425,7 @@
                                 ((_ version) version))))
     (sha256
      (base32
-      "04lqbclkvn9nsksgjpjilh78a8y17mwwq4pmhr6h8gvpp2y3bhhc"))))
+      "0gqarll08i7rcs1amapciv263xvzglc8p44ikavq3xd12yyvcd98"))))
 
 (define (origin-file origin file)
   (computed-file
@@ -563,7 +570,7 @@
                                   %chromium-version "-lite.tar.xz"))
               (sha256
                (base32
-                "1m22whg5n9lw9gqhalm95jwfm45lqp4a7cs3mn3f4n8w0rvr0r5j"))
+                "1salvlw5sykx3zmsbp7cgmf7y8yy6jlgb4b4zswzsbjrprk4jnap"))
               (modules '((guix build utils)))
               (snippet (force ungoogled-chromium-snippet))))
     (build-system gnu-build-system)
@@ -589,7 +596,6 @@
               "use_custom_libcxx=false" ; support for this is deprecated and to be removed.
               "optimize_webui=false"
               "webnn_use_tflite=false"
-              "build_tflite_with_xnnpack=false"
               "safe_browsing_use_unrar=false"
               "chrome_pgo_phase=0"
               "use_sysroot=false"
@@ -682,7 +688,7 @@
               "use_gnome_keyring=false" ;deprecated by libsecret
               "use_pulseaudio=true"
               "link_pulseaudio=true"
-              "icu_use_data_file=true"
+              "icu_use_data_file=false"
 
               ;; VA-API acceleration is currently only supported on x86_64-linux.
               #$@(if (string-prefix? "x86_64" (or (%current-target-system)
@@ -690,13 +696,6 @@
                      '("use_vaapi=true")
                      '())
 
-              #$@(if (string-prefix? "aarch64" (or (%current-target-system)
-                                                   (%current-system)))
-                     '("use_v4l2_codec=true"
-                       "use_vaapi=false"
-                       "use_av1_hw_decoder=true")
-                     '())
-
               ;; Do not artificially restrict formats supported by system ffmpeg.
               "proprietary_codecs=true"
               "ffmpeg_branding=\"Chrome\""
@@ -770,7 +769,12 @@
                    (string-append libclang "clang_base_path"))
                   (("(_rustfmt_path = \")\\$\\{rust_bindgen_root\\}" _ rustfmt)
                    (string-append rustfmt "${rust_sysroot_absolute}"))))))
-          (add-after 'patch-stuff 'add-absolute-references
+          (add-after 'patch-stuff 'include-pthreadpool
+            ;; FIXME: Somehow the build system cannot locate this header.
+            (lambda _
+              (copy-file "third_party/pthreadpool/src/include/pthreadpool.h"
+                         "pthreadpool.h")))
+          (add-after 'include-pthreadpool 'add-absolute-references
             (lambda* (#:key inputs #:allow-other-keys)
               (let ((cups-config (search-input-file inputs "/bin/cups-config"))
                     (libnssckbi.so (search-input-file inputs
@@ -888,15 +892,13 @@
                                        "resources.pak"
                                        "v8_context_snapshot.bin"
                                        "chrome_crashpad_handler"
-                                       "icudtl.dat"
 
                                        ;; Swiftshader ICD.
                                        "libvk_swiftshader.so"
                                        "vk_swiftshader_icd.json"
 
-                                       ;; Chromium ships its own libGL and
+                                       ;; Chromium ships its own libGL
-                                       ;; vulkan implementation called ANGLE.
+                                       ;; implementation called ANGLE.
-                                       "libvulkan.so.1"
                                        "libEGL.so" "libGLESv2.so"))
                      (locales        (string-append lib "/locales"))
                      (resources      (string-append lib "/resources"))
@@ -912,11 +914,9 @@
 
                 (substitute* '("chrome/app/resources/manpage.1.in"
                                "chrome/installer/linux/common/desktop.template")
-                  (("@@MENUNAME") "Chromium")
+                  (("@@MENUNAME@@") "Chromium")
-                  (("@@PACKAGE") "chromium")
+                  (("@@PACKAGE@@") "chromium")
-                  (("/usr/bin/@@usr_bin_symlink_name") exe)
+                  (("/usr/bin/@@USR_BIN_SYMLINK_NAME@@") exe))
-                  (("@@uri_scheme") "x-scheme-handler/chromium;")
-                  (("@@extra_desktop_entries") ""))
 
                 (mkdir-p man)
                 (copy-file "chrome/app/resources/manpage.1.in"

gnu/packages/cinnamon.scm

@@ -30,6 +30,7 @@
   #:use-module (guix build-system gnu)
   #:use-module (guix build-system meson)
   #:use-module (guix build-system pyproject)
+  #:use-module (guix build-system python)
   #:use-module (gnu packages)
   #:use-module (gnu packages admin)
   #:use-module (gnu packages autotools)

gnu/packages/clojure.scm

@@ -23,24 +23,19 @@
 ;;; along with GNU Guix.  If not, see <http://www.gnu.org/licenses/>.
 
 (define-module (gnu packages clojure)
+  #:use-module (gnu packages)
   #:use-module (gnu packages base)
-  #:use-module (gnu packages golang-build)
-  #:use-module (gnu packages golang-check)
-  #:use-module (gnu packages golang-xyz)
-  #:use-module (gnu packages golang)
   #:use-module (gnu packages guile)
   #:use-module (gnu packages java)
   #:use-module (gnu packages maven)
-  #:use-module (gnu packages)
-  #:use-module (guix build-system ant)
-  #:use-module (guix build-system clojure)
-  #:use-module (guix build-system copy)
-  #:use-module (guix build-system go)
-  #:use-module (guix download)
   #:use-module (guix gexp)
-  #:use-module (guix git-download)
   #:use-module ((guix licenses) #:prefix license:)
-  #:use-module (guix packages))
+  #:use-module (guix packages)
+  #:use-module (guix download)
+  #:use-module (guix git-download)
+  #:use-module (guix build-system ant)
+  #:use-module (guix build-system copy)
+  #:use-module (guix build-system clojure))
 
 (define-public clojure-spec-alpha
   (package
@@ -382,14 +377,14 @@ designs.")
 (define-public clojure-tools
   (package
     (name "clojure-tools")
-    (version "1.12.4.1618")
+    (version "1.12.4.1582")
     (source
      (origin
        (method url-fetch)
        (uri (string-append "https://download.clojure.org/install/clojure-tools-"
                            version
                            ".tar.gz"))
-       (sha256 (base32 "08fy3k248sbsrbgl0lq3q4d23vp4chdawy230ardx61sssk9sxhk"))
+       (sha256 (base32 "08gzfblnz0zhnk6pwr9vcm6y168psgrwmqww3wqk1v7j5gr68n7x"))
        ;; Remove AOT compiled JAR.  The other JAR only contains uncompiled
        ;; Clojure source code.
        (snippet
@@ -517,7 +512,7 @@ defining and using monads and useful monadic functions.")
 (define-public clojure-core-async
   (package
     (name "clojure-core-async")
-    (version "1.9.865")
+    (version "1.8.741")
     (home-page "https://github.com/clojure/core.async")
     (source (origin
               (method git-fetch)
@@ -527,7 +522,7 @@ defining and using monads and useful monadic functions.")
               (file-name (git-file-name name version))
               (sha256
                (base32
-                "15pc2m58fscix85gsiwl9dlvw2x6alvc4qni46rry2sr00nfzd3r"))))
+                "1m6lir2xr119yxz483cz0rfw4k3a40qmmsiwl2y7kyxy65vab60z"))))
     (build-system clojure-build-system)
     (arguments
      '(#:source-dirs '("src/main/clojure")
@@ -551,7 +546,7 @@ work on Communicating Sequential Processes (CSP).")
 (define-public clojure-core-cache
   (package
     (name "clojure-core-cache")
-    (version "1.2.263")
+    (version "1.2.249")
     (source (origin
               (method git-fetch)
               (uri (git-reference
@@ -560,7 +555,7 @@ work on Communicating Sequential Processes (CSP).")
               (file-name (git-file-name name version))
               (sha256
                (base32
-                "19q81aki8wb120v6jfylwqgf965mwkhrpcsrs5zazjfjv8vq6glx"))))
+                "0hdwv5dsx49i12riz3frzshwkgw26ah43667lzga2n6zgpmrh8ii"))))
     (build-system clojure-build-system)
     (arguments
      '(#:source-dirs '("src/main/clojure")
@@ -603,7 +598,7 @@ It supports Clojure 1.5.1 and later as well as ClojureScript.")
 (define-public clojure-core-memoize
   (package
     (name "clojure-core-memoize")
-    (version "1.2.281")
+    (version "1.2.273")
     (source (origin
               (method git-fetch)
               (uri (git-reference
@@ -612,7 +607,7 @@ It supports Clojure 1.5.1 and later as well as ClojureScript.")
               (file-name (git-file-name name version))
               (sha256
                (base32
-                "0bnlqs7m69svhfadwy46wgc88j9ma9fhdk4586b4xxppamj6c5j4"))))
+                "009fj19y464an66pryygmqbnx2dqk5wkp40rbkbgkir0ax0k6j3y"))))
     (build-system clojure-build-system)
     (arguments
      '(#:source-dirs '("src/main/clojure")
@@ -739,7 +734,7 @@ maps also support conj/peek/pop operations.")
 (define-public clojure-data-xml
   (package
     (name "clojure-data-xml")
-    (version "0.2.0-alpha11")
+    (version "0.2.0-alpha10")
     (home-page "https://github.com/clojure/data.xml")
     (source (origin
               (method git-fetch)
@@ -749,7 +744,7 @@ maps also support conj/peek/pop operations.")
               (file-name (git-file-name name version))
               (sha256
                (base32
-                "0k7hq3s4zbk0ryhgycivl1dk22fzh60522a57az8ykmixhqjxwhg"))))
+                "0mnhgrh20p2wwmq8a4631dkpxbgbijwi6sfhw5v784hzkjkfgkh6"))))
     (build-system clojure-build-system)
     (arguments
      '(#:source-dirs '("src/main/clojure")
@@ -867,7 +862,7 @@ tree.
 (define-public clojure-tools-analyzer
   (package
     (name "clojure-tools-analyzer")
-    (version "1.2.2")
+    (version "1.2.1")
     (home-page "https://github.com/clojure/tools.analyzer")
     (source (origin
               (method git-fetch)
@@ -877,7 +872,7 @@ tree.
               (file-name (git-file-name name version))
               (sha256
                (base32
-                "07cxphrmd6a3clnalrdqxlyin8l0lw0xhjy2rh9gaizxfv5c23jp"))))
+                "0apa3gc45rmdj19plbvglpj6i9dadkgvvidj5mcnkzi9y3h0nr27"))))
     (build-system clojure-build-system)
     (arguments
      '(#:source-dirs '("src/main/clojure")
@@ -943,7 +938,7 @@ tools.analyzer, providing additional JVM-specific passes.")
 (define-public clojure-tools-cli
   (package
     (name "clojure-tools-cli")
-    (version "1.4.256")
+    (version "1.3.250")
     (home-page "https://github.com/clojure/tools.cli")
     (source (origin
               (method git-fetch)
@@ -952,7 +947,7 @@ tools.analyzer, providing additional JVM-specific passes.")
                     (commit (string-append "v" version))))
               (file-name (git-file-name name version))
               (sha256
-               (base32 "1kr1cpypzgzh8pkih5qamsaq8c96jfpcvmn9f330sic2shb53m55"))))
+               (base32 "1nyw33w83gd7xlbpma03p4jwcdcp38h8y99x2rqw4zcnw19gsz4p"))))
     (build-system clojure-build-system)
     (arguments
      '(#:source-dirs '("src/main/clojure/")
@@ -964,25 +959,29 @@ tools.analyzer, providing additional JVM-specific passes.")
 work with command-line arguments.")
     (license license:epl1.0)))
 
-(define-public clojure-tools-deps-edn
+(define-public clojure-tools-deps
   (package
-    (name "clojure-tools-deps-edn")
+    (name "clojure-tools-deps")
-    (version "0.9.22")
+    (version "0.28.1578")
-    (home-page "https://github.com/clojure/tools.deps.edn")
+    (home-page "https://github.com/clojure/tools.deps")
     (source (origin
               (method git-fetch)
               (uri (git-reference
-                     (url home-page)
+                    (url home-page)
-                     (commit (string-append "v" version))))
+                    (commit (string-append "v" version))))
               (file-name (git-file-name name version))
               (sha256
                (base32
-                "082p6zpbb8vvdc9ncc0d66h3g7sax4pp0h4fymwiv0lakzyq3g9g"))))
+                "1w3f8cl81q4kln6iz74fnfzms4c4x279ivh1962pcg22q8l1w8d5"))))
     (build-system clojure-build-system)
     (arguments
      `(#:source-dirs '("src/main/clojure" "src/main/resources")
+       #:java-source-dirs '("src/main/java")
        #:test-dirs '("src/test/clojure")
        #:doc-dirs '()
+       ;; FIXME: Could not initialize class
+       ;; org.eclipse.aether.transport.http.SslSocketFactory
+       #:tests? #f
        #:phases
        (modify-phases %standard-phases
          (add-before 'build 'reference-clojure-jar-input
@@ -993,42 +992,12 @@ work with command-line arguments.")
                 (string-append "org.clojure/clojure {:local/root \""
                                (assoc-ref inputs "clojure")
                                "/share/java/clojure.jar\"}"))))))))
-    (synopsis "Reader for @file{deps.edn}")
-    (description "This package provides support for reading and manipulating
-@file{deps.edn} files and data structures.  It can be used in scenarios where
-the @code{tools.deps} library is not needed for dep expansion.")
-    (license license:epl1.0)))
-
-(define-public clojure-tools-deps
-  (package
-    (name "clojure-tools-deps")
-    (version "0.29.1598")
-    (home-page "https://github.com/clojure/tools.deps")
-    (source (origin
-              (method git-fetch)
-              (uri (git-reference
-                    (url home-page)
-                    (commit (string-append "v" version))))
-              (file-name (git-file-name name version))
-              (sha256
-               (base32
-                "1qds0ri6y8s7419x3pzl9yhhr19qli3l52yg9a78w47h0w6dd1kv"))))
-    (build-system clojure-build-system)
-    (arguments
-     `(#:source-dirs '("src/main/clojure" "src/main/resources")
-       #:java-source-dirs '("src/main/java")
-       #:test-dirs '("src/test/clojure")
-       #:doc-dirs '()
-       ;; FIXME: Could not initialize class
-       ;; org.eclipse.aether.transport.http.SslSocketFactory
-       #:tests? #f))
     (propagated-inputs (list maven-3.8-core
                              maven-resolver-1.6-connector-basic
                              maven-resolver-1.6-transport-http
                              maven-resolver-1.6-transport-file
                              clojure-tools-gitlibs
                              clojure-tools-cli
-                             clojure-tools-deps-edn
                              clojure-data-xml
                              cognitect-aws-api))
     (synopsis "Clojure library supporting clojure-tools")
@@ -1206,7 +1175,7 @@ asynchronous support.")
 (define-public cognitect-aws-api
   (package
     (name "cognitect-aws-api")
-    (version "0.8.824")
+    (version "0.8.800")
     (source (origin
               (method git-fetch)
               (uri (git-reference
@@ -1215,7 +1184,7 @@ asynchronous support.")
               (file-name (git-file-name name version))
               (sha256
                (base32
-                "0ivlcmsr7rvr7741k9wzniv2zxijida0b588nqngm5vrgna816yl"))
+                "17sxj3mvq4iasr0kchbx2anmrh25v8bvmpam4si704vksmnm28p3"))
               (modules '((guix build utils)))
               (snippet
                '(begin
@@ -1258,44 +1227,3 @@ an operation on the service. invoke takes a map and returns a map, and works
 the same way for every operation on every service.")
     (home-page "https://github.com/cognitect-labs/aws-api")
     (license license:asl2.0)))
-
-(define-public let-go
-  (package
-    (name "let-go")
-    (version "1.7.4")
-    (source
-     (origin
-       (method git-fetch)
-       (uri (git-reference
-             (url "https://github.com/nooga/let-go")
-             (commit (string-append "v" version))))
-       (file-name (git-file-name name version))
-       (sha256
-        (base32 "139a129fw3w9a4bcfgms60ll90vy2vmqinbmjn44zmgx4fr2adif"))))
-    (build-system go-build-system)
-    (arguments
-     (list
-      #:go go-1.26
-      #:install-source? #f
-      #:import-path "github.com/nooga/let-go"))
-    (native-inputs
-     (list go-github-com-davecgh-go-spew
-           go-github-com-alimpfard-line
-           go-github-com-hashicorp-go-uuid
-           go-github-com-kr-pretty
-           go-github-com-pmezard-go-difflib
-           go-github-com-stretchr-testify
-           go-github-com-zeebo-bencode
-           go-golang-org-x-sys
-           go-gopkg-in-check-v1
-           go-gopkg-in-yaml-v3))
-    (home-page "https://nooga.github.io/let-go")
-    (synopsis "Clojure dialect written in Go")
-    (description
-     "let-go is a Clojure dialect with a bytecode compiler and a stack virtual
-machine, written in the Go programming language.
-
-It is not a drop-in replacement for Clojure JVM.  It does not load JARs and
-does not aim to.  Most idiomatic Clojure code runs unmodified, but a real
-project with library dependencies will need adjustments.")
-    (license license:expat)))

gnu/packages/cluster.scm

@@ -32,7 +32,7 @@
   #:use-module (gnu packages check)
   #:use-module (gnu packages compression)
   #:use-module (gnu packages docbook)
-  #:use-module (gnu packages compiler-tools)
+  #:use-module (gnu packages flex)
   #:use-module (gnu packages gettext)
   #:use-module (gnu packages libevent)
   #:use-module (gnu packages linux)

gnu/packages/cmake.scm

@@ -47,6 +47,7 @@
   #:use-module (guix build-system copy)
   #:use-module (guix build-system emacs)
   #:use-module (guix build-system pyproject)
+  #:use-module (guix build-system python)
   #:use-module ((guix search-paths) #:select ($SSL_CERT_DIR $SSL_CERT_FILE))
   #:use-module (gnu packages)
   #:use-module (gnu packages backup)

gnu/packages/cobol.scm

@@ -25,7 +25,7 @@
   #:use-module (guix gexp)
   #:use-module (gnu packages bison)
   #:use-module (gnu packages dbm)
-  #:use-module (gnu packages compiler-tools)
+  #:use-module (gnu packages flex)
   #:use-module (gnu packages multiprecision)
   #:use-module (gnu packages ncurses)
   #:use-module (gnu packages perl)

gnu/packages/code.scm

@@ -1,8 +1,8 @@
 ;;; GNU Guix --- Functional package management for GNU
-;;; Copyright © 2012-2013, 2015, 2018, 2020, 2021, 2023, 2025 Ludovic Courtès <ludo@gnu.org>
+;;; Copyright © 2013, 2015, 2018, 2020, 2021, 2023 Ludovic Courtès <ludo@gnu.org>
 ;;; Copyright © 2013, 2015 Andreas Enge <andreas@enge.fr>
 ;;; Copyright © 2015, 2018 Ricardo Wurmus <rekado@elephly.net>
-;;; Copyright © 2016, 2017, 2018, 2019-2024 Efraim Flashner <efraim@flashner.co.il>
+;;; Copyright © 2016, 2017, 2019-2024 Efraim Flashner <efraim@flashner.co.il>
 ;;; Copyright © 2017, 2018, 2019, 2020 Tobias Geerinckx-Rice <me@tobias.gr>
 ;;; Copyright © 2017, 2018 Clément Lassieur <clement@lassieur.org>
 ;;; Copyright © 2017 Andy Wingo <wingo@igalia.com>
@@ -49,6 +49,7 @@
   #:use-module (guix git-download)
   #:use-module (guix build-system gnu)
   #:use-module (guix build-system cmake)
+  #:use-module ((guix build-system python) #:select (pypi-uri))
   #:use-module (guix build-system pyproject)
   #:use-module (guix build-system trivial)
   #:use-module (guix build-system go)
@@ -66,7 +67,7 @@
   #:use-module (gnu packages curl)
   #:use-module (gnu packages elf)
   #:use-module (gnu packages emacs)
-  #:use-module (gnu packages compiler-tools)
+  #:use-module (gnu packages flex)
   #:use-module (gnu packages gcc)
   #:use-module (gnu packages gettext)
   #:use-module (gnu packages golang-build)
@@ -865,46 +866,6 @@ Objective@tie{}C, D, Java, Pawn, and Vala).  Features:
 the C, C++, C++/CLI, Objective‑C, C#, and Java programming languages.")
     (license license:lgpl3+)))
 
-(define-public idutils
-  (package
-    (name "idutils")
-    (version "4.6")
-    (source
-     (origin
-       (method url-fetch)
-       (uri (string-append "mirror://gnu/idutils/idutils-" version ".tar.xz"))
-       (sha256
-        (base32 "1hmai3422iaqnp34kkzxdnywl7n7pvlxp11vrw66ybxn9wxg90c1"))
-       (modules '((guix build utils)))
-       (snippet
-        '(begin
-           (substitute* (find-files "lib" "\\.c$")
-             (("#if defined _IO_ftrylockfile")
-              "#if defined _IO_EOF_SEEN"))
-           (substitute* "lib/stdio-impl.h"
-             (("^/\\* BSD stdio derived implementations")
-              (string-append
-               "#if !defined _IO_IN_BACKUP && defined _IO_EOF_SEEN" "\n"
-               "# define _IO_IN_BACKUP 0x100\n" "#endif\n\n"
-               "/* BSD stdio derived implementations")))
-
-           ;; 'gets' is deprecated in glibc 2.33 and its declaration is
-           ;; no longer visible by default from <stdio.h>.
-           (substitute* "lib/stdio.in.h"
-             (("_GL_WARN_ON_USE \\(gets.*")
-              ""))))))
-    (build-system gnu-build-system)
-    (native-inputs (list emacs-minimal))
-    (home-page "https://www.gnu.org/software/idutils/")
-    (synopsis "Identifier database utilities")
-    (description
-     "The GNU idutils package includes tools to create an index of textual
-tokens used in a list of file names and then to query that index.  Thus, it
-allows the user to, for example, find all the uses of a particular function
-in a large programming project.  In addition to handling textual tokens, it
-can also handle numeric constants and the contents of character strings.")
-    (license license:gpl3+)))
-
 (define-public indent
   ;; XXX: Not released anymore, but some patches fix CVEs.
   (let ((commit "1737c929cbe2ec8a181107df9742894a44c57f71")

gnu/packages/codex.scm

@@ -18,10 +18,10 @@
 
 ;;; This module is separate from (gnu packages rust-apps) to avoid a
 ;;; circular module dependency: (gnu packages rust-sources), which
-;;; defines rust-codex-0.124.0, transitively loads (gnu packages
+;;; defines rust-codex-0.98.0, transitively loads (gnu packages
 ;;; rust-apps) through its #:use-module chain.  If the codex package
 ;;; lived in rust-apps.scm, loading rust-sources would trigger loading
-;;; rust-apps before rust-codex-0.124.0 is defined, causing an unbound
+;;; rust-apps before rust-codex-0.98.0 is defined, causing an unbound
 ;;; variable error.
 
 (define-module (gnu packages codex)
@@ -36,46 +36,33 @@
   #:use-module (gnu packages base)
   #:use-module (gnu packages cmake)
   #:use-module (gnu packages compression)
-  #:use-module (gnu packages linux)
   #:use-module (gnu packages libunwind)
   #:use-module (gnu packages llvm)
-  #:use-module (gnu packages lsof)
   #:use-module (gnu packages perl)
   #:use-module (gnu packages pkg-config)
   #:use-module (gnu packages python)
   #:use-module (gnu packages rust-sources)
   #:use-module (gnu packages sqlite)
-  #:use-module (gnu packages textutils)
-  #:use-module (gnu packages nss)
   #:use-module (gnu packages tls)
-  #:use-module (gnu packages version-control)
+  #:use-module (gnu packages version-control))
-  #:use-module (gnu packages virtualization))
 
 (define-public codex
   (package
     (name "codex")
-    (version (package-version rust-codex-0.124.0))
+    (version (package-version rust-codex-0.98.0))
     (source
      (origin
-       (inherit (package-source rust-codex-0.124.0))
+       (inherit (package-source rust-codex-0.98.0))
        (patches (search-patches
-                 "codex-acp-0.11.1-disable-code-mode.patch"
+                 "codex-0.98.0-remove-patch-sections.patch"
-                 "rust-codex-0.124.0-code-mode-stub-toolname.patch"
-                 "rust-codex-0.124.0-remove-patch-sections.patch"
-                 "rust-codex-0.120.0-remove-libwebrtc.patch"
                  "rust-codex-0.98.0-test-shebangs.patch"
-                 "rust-codex-0.120.0-test-timeout.patch"))))
+                 "rust-codex-0.98.0-test-timeout.patch"))))
     (build-system cargo-build-system)
     (arguments
      (list
       #:install-source? #f
-      ;; exec-server is library-only in 0.124 (no [[bin]] in
+      #:cargo-install-paths '(list "cli" "exec" "exec-server"
-      ;; exec-server/Cargo.toml); cargo install --path exec-server fails
+                                   "linux-sandbox" "mcp-server" "network-proxy"
-      ;; with "no packages found with binaries or examples".  Drop it
-      ;; from the install paths -- the library is consumed via the
-      ;; workspace by other binaries here, not installed standalone.
-      #:cargo-install-paths '(list "cli" "exec"
-                                   "linux-sandbox" "mcp-server"
                                    "app-server" "tui")
       ;; schema_fixtures_match_generated (upstream fixture is stale:
       ;; FileChange::Update in codex-protocol gained old_content,
@@ -84,55 +71,72 @@
       #:cargo-test-flags '(list "--workspace"
                                 "--exclude" "codex-app-server-protocol"
                                 "--"
-                                ;;; BEGIN Landlock returns NotEnforced
+                                ;; These tests exercise sandbox denial and
-                                ;;; in the build container; the sandbox
+                                ;; escalation, which requires Landlock to
-                                ;;; binary panics instead of cleanly
+                                ;; cleanly deny filesystem access.  Inside the
-                                ;;; denying filesystem access.
+                                ;; build container Landlock returns NotEnforced
-                                ;; Sandbox denial and escalation tests.
+                                ;; and the sandbox binary panics instead.
+                                ;; Disabling Landlock would not help either,
+                                ;; since these tests need a working sandbox to
+                                ;; have anything to deny and escalate.
                                 "--skip" "sandbox_denied_shell_returns_original_output"
-                                ;; Sandbox denial and escalation tests.
                                 "--skip" "shell_escalated_permissions_rejected_then_ok"
-                                ;; Sandbox denial and escalation tests.
                                 "--skip" "unified_exec_runs_under_sandbox"
-                                ;; codex-exec: spawn_command_under_linux_sandbox
+                                ;; These tests (in codex-exec) directly call
-                                ;; panics with LandlockRestrict (exit 101).
+                                ;; spawn_command_under_linux_sandbox to verify
+                                ;; that python and bash work correctly inside
+                                ;; the Landlock sandbox.  The sandbox binary
+                                ;; (codex-exec) panics with LandlockRestrict
+                                ;; (exit code 101) before the inner command
+                                ;; even starts.
                                 "--skip" "python_getpwuid_works_under_sandbox"
-                                ;; Same as above.
                                 "--skip" "python_multiprocessing_lock_works_under_sandbox"
-                                ;; Same as above.
                                 "--skip" "sandbox_distinguishes_command_and_policy_cwds"
-                                ;; linux-sandbox: process_exec_tool_call
+                                ;; These linux-sandbox tests directly invoke
-                                ;; invokes Landlock; same panic.
+                                ;; the Landlock sandbox via
+                                ;; process_exec_tool_call; same root cause.
                                 "--skip" "test_writable_root"
-                                ;; Same as above.
                                 "--skip" "test_timeout"
-                                ;; Same as above.
                                 "--skip" "test_root_read"
-                                ;; Same as above.
                                 "--skip" "test_dev_null_write"
-                                ;; Same as above.
                                 "--skip" "test_no_new_privs_is_enabled"
-                                ;; One scenario runs through Landlock
+                                ;; This test iterates many approval scenarios;
-                                ;; which panics; cargo --skip cannot
+                                ;; one of them
-                                ;; target individual scenarios.
+                                ;; (danger_full_access_on_request_allows_network)
+                                ;; runs a command through the Landlock sandbox
+                                ;; binary, which panics with LandlockRestrict
+                                ;; inside the build container.  Cargo --skip
+                                ;; cannot target individual scenarios, so we
+                                ;; skip the entire matrix.
                                 "--skip" "approval_matrix_covers_all_modes"
-                                ;; Landlock panic triggers escalation-retry
+                                ;; This test verifies session-level patch
-                                ;; which interferes with the approval cache.
+                                ;; approval caching: approve once, skip
+                                ;; future prompts for the same file.  When
+                                ;; Landlock is unavailable (as in the Guix
+                                ;; build container) the sandbox binary panics,
+                                ;; triggering the escalation-retry path, which
+                                ;; interferes with the approval cache and
+                                ;; causes a spurious re-prompt on the second
+                                ;; patch.
                                 "--skip" "approving_apply_patch_for_session_skips_future_prompts_for_same_file"
                                 ;; These tests expect to interrupt a
                                 ;; long-running 'sleep 60' and receive
-                                ;; TurnAborted.  What happens:
+                                ;; TurnAborted.  Default test config is
+                                ;; OnRequest + ReadOnly.  What happens:
                                 ;;
                                 ;; 1. ReadOnly wraps the command with
                                 ;;    codex-linux-sandbox (Landlock-based).
-                                ;; 2. Landlock is unavailable, so the
+                                ;; 2. Landlock is unavailable in the Guix
-                                ;;    sandbox binary exits instantly.
+                                ;;    build container, so the sandbox
+                                ;;    binary exits instantly (~1 ms).
                                 ;; 3. Orchestrator gets SandboxErr::Denied.
                                 ;;    wants_no_sandbox_approval(OnRequest)
-                                ;;    returns false, so no escalation --
+                                ;;    returns false (sandboxing.rs:222),
-                                ;;    denial returned directly.
+                                ;;    so no escalation -- denial returned
+                                ;;    directly.
                                 ;; 4. ToolEmitter::finish sends the error
-                                ;;    to the mock model.
+                                ;;    to the mock model as
+                                ;;    function_call_output.
                                 ;; 5. Second mock SSE response fires,
                                 ;;    turn finishes with TurnComplete.
                                 ;; 6. Op::Interrupt arrives 100 ms later,
@@ -146,370 +150,74 @@
                                 ;; has only one mock response (so the turn
                                 ;; cannot complete first).
                                 "--skip" "interrupt_persists_turn_aborted_marker_in_next_request"
-                                ;; Same causal chain as above.
                                 "--skip" "interrupt_tool_records_history_entries"
-                                ;; WorkspaceWrite sandbox policy wraps
+                                ;; Upstream bug: test hardcodes "0.0.0" in the
-                                ;; commands with codex-linux-sandbox;
+                                ;; expected user-agent string but the workspace
-                                ;; Landlock panics, command never runs,
+                                ;; version is "0.98.0".
-                                ;; exit_code is None instead of Some(0).
+                                "--skip" "get_user_agent_returns_current_codex_user_agent"
-                                "--skip" "request_permissions_grants_apply_to_later_exec_command_calls"
+                                ;; Same upstream bug: mcp-server tests
-                                ;; Same root cause.
+                                ;; check the initialize response which
-                                "--skip" "request_permissions_grants_apply_to_later_shell_command_calls"
+                                ;; includes "version": "0.0.0" but the
-                                ;; Same root cause.
+                                ;; server returns "0.98.0".
-                                "--skip" "partial_request_permissions_grants_do_not_preapprove_new_permissions"
-                                ;;; END Landlock
-                                ;;; BEGIN mcp_process.rs initialize
-                                ;;; assertion expects "version":"0.0.0"
-                                ;;; but the server returns "0.120.0".
                                 "--skip" "test_codex_tool_passes_base_instructions"
                                 "--skip" "test_shell_command_approval_triggers_elicitation"
                                 "--skip" "test_patch_approval_triggers_elicitation"
-                                ;;; END version mismatch
+                                ;; These codex-exec-server tests need
-                                ;;; BEGIN Test isolation bug:
+                                ;; "dotslash", a Meta tool that lazily
-                                ;;; unique_temp_dir() in
+                                ;; downloads pre-built binaries from a
-                                ;;; state/src/runtime.rs names dirs
+                                ;; JSON manifest.  The test helper
-                                ;;; using nanosecond timestamps, so
+                                ;; create_transport runs
-                                ;;; parallel tests can collide.  The
+                                ;; `dotslash -- fetch <path>` to obtain a
-                                ;;; SQLite migration runs CREATE TABLE
+                                ;; custom bash binary described in
-                                ;;; threads (without IF NOT EXISTS),
+                                ;; exec-server/tests/suite/bash.
-                                ;;; so the second init panics with
+                                ;; dotslash is not available in the build
-                                ;;; "table threads already exists".
+                                ;; container.
+                                "--skip" "list_tools"
+                                "--skip" "accept_elicitation_for_prompt_rule"
+                                ;;; Test isolation bug: each test in
+                                ;;; state/src/runtime.rs calls
+                                ;;; unique_temp_dir() to get its own
+                                ;;; temporary directory (and thus its
+                                ;;; own SQLite database).  That function
+                                ;;; names directories using the current
+                                ;;; nanosecond timestamp, so when tests
+                                ;;; run in parallel several can receive
+                                ;;; the same name and open the same
+                                ;;; database.  The initial SQLite
+                                ;;; migration runs CREATE TABLE threads
+                                ;;; (without IF NOT EXISTS), so any init
+                                ;;; after the first panics with "table
+                                ;;; threads already exists".  Any of
+                                ;;; these tests
+                                ;;; can be the victim.
                                 "--skip" "init_removes_legacy_state_db_files"
                                 "--skip" "upsert_and_get_thread_memory"
                                 "--skip" "get_last_n_thread_memories_for_cwd_matches_exactly"
                                 "--skip" "upsert_thread_memory_errors_for_unknown_thread"
                                 "--skip" "get_last_n_thread_memories_for_cwd_zero_returns_empty"
                                 "--skip" "get_last_n_thread_memories_for_cwd_does_not_prefix_match"
-                                "--skip" "deleting_thread_cascades_thread_memory"
+                                "--skip" "deleting_thread_cascades_thread_memory")
-                                ;;; END SQLite test isolation
-                                ;; The test spawns 'sh' after
-                                ;; env_clear() with an empty env map;
-                                ;; glibc execvp uses confstr(_CS_PATH)
-                                ;; ("/bin:/usr/bin") when PATH is
-                                ;; unset, but /bin/sh does not exist
-                                ;; in the build container.
-                                "--skip" "cancellation_expiration_keeps_process_alive_until_terminated"
-                                ;; Proxy baseline_policy returns 403
-                                ;; "not_allowed_local" for example.com;
-                                ;; test expects 200.
-                                "--skip" "managed_network_proxy_decider_survives_full_access_start"
-                                ;;; BEGIN bash_snapshot_script() uses
-                                ;;; "compgen -e" to list exports but
-                                ;;; bash-minimal lacks programmable
-                                ;;; completion; export section is empty.
-                                ;; stdout.contains("VALID_NAME") fails.
-                                "--skip" "bash_snapshot_filters_invalid_exports"
-                                ;; stdout.contains("MULTILINE_CERT") fails.
-                                "--skip" "bash_snapshot_preserves_multiline_exports"
-                                ;; snapshot.contains("PATH") fails.
-                                "--skip" "linux_bash_snapshot_includes_sections"
-                                ;;; END compgen
-                                ;; substitute* patches PAGER to store
-                                ;; path of cat; test expects bare "cat".
-                                "--skip" "unified_exec_env_injects_defaults"
-                                ;;; BEGIN V8 disabled (codex-code-mode
-                                ;;; default-features = false).
-                                "--skip" "suite::code_mode::"
-                                "--skip" "suite::js_repl::"
-                                "--skip" "suite::view_image::js_repl_"
-                                ;;; END V8 disabled
-                                ;;; BEGIN same compgen root cause:
-                                ;;; assert_posix_snapshot_sections
-                                ;;; asserts snapshot.contains("PATH").
-                                "--skip" "linux_shell_command_uses_shell_snapshot"
-                                "--skip" "linux_unified_exec_uses_shell_snapshot"
-                                "--skip" "shell_command_snapshot_still_intercepts_apply_patch"
-                                ;;; END compgen / shell snapshot
-                                ;;; BEGIN These sandbox tests set
-                                ;;; exclude_slash_tmp: true which makes
-                                ;;; bwrap exclude /tmp from its mount
-                                ;;; namespace.  Since Guix builds under
-                                ;;; /tmp, the codex-linux-sandbox binary
-                                ;;; becomes invisible to bwrap even though
-                                ;;; the test adds the helper dir as a
-                                ;;; filesystem carve-out -- the parent /tmp
-                                ;;; bind-mount is absent so the carve-out
-                                ;;; has nothing to carve out of.
-                                "--skip" "sandbox_reenables_writable_subpaths_under_unreadable_parents"
-                                "--skip" "managed_proxy_mode_routes_through_bridge_and_blocks_direct_egress"
-                                ;;; END exclude_slash_tmp
-                                ;; Expects 3 TerminalInteraction events
-                                ;; across timed poll windows; under CPU
-                                ;; contention events merge into 2.
-                                "--skip" "unified_exec_terminal_interaction_captures_delayed_output"
-                                ;;; BEGIN assert_parallel_duration
-                                ;;; requires < 1600 ms for parallel ops.
-                                ;; Two 300 ms test_sync_tool calls.
-                                "--skip" "read_file_tools_run_in_parallel"
-                                ;; Two "sleep 0.25" shell commands.
-                                "--skip" "shell_tools_run_in_parallel"
-                                ;; One test_sync_tool + one shell sleep.
-                                "--skip" "mixed_parallel_tools_run_in_parallel"
-                                ;;; END assert_parallel_duration
-                                ;; Asserts elapsed >= 4500 ms and
-                                ;; < 5800 ms for a 5 s timeout; under
-                                ;; contention elapsed drifts past 5800.
-                                "--skip" "remote_models_request_times_out_after_5s"
-                                ;; Queued inter-agent mail must be
-                                ;; injected between the reasoning/
-                                ;; commentary item and the gate release;
-                                ;; under contention the gate fires before
-                                ;; the mail is processed, so the snapshot
-                                ;; shows the stale function_call instead
-                                ;; of the expected mail message.
-                                "--skip" "queued_inter_agent_mail_triggers_follow_up_after_commentary_message_item"
-                                ;; Same root cause: snapshot mismatch at
-                                ;; pending_input.rs assert_two_responses_
-                                ;; input_snapshot; expects mail at position
-                                ;; 04 but gets function_call/shell instead.
-                                "--skip" "queued_inter_agent_mail_triggers_follow_up_after_reasoning_item"
-                                ;;; BEGIN DNS for hostnames like
-                                ;;; example.com fails in the build
-                                ;;; sandbox.  host_resolves_to_non_
-                                ;;; public_ip() in runtime.rs treats
-                                ;;; failed DNS as non-public and
-                                ;;; returns NotAllowedLocal, so tests
-                                ;;; expecting Allowed or Decider get
-                                ;;; Deny/BaselinePolicy instead.
-                                "--skip" "host_blocked_requires_allowlist_match"
-                                "--skip" "add_allowed_domain_removes_matching_deny_entry"
-                                "--skip" "host_blocked_subdomain_wildcards_exclude_apex"
-                                "--skip" "host_blocked_global_wildcard_allowlist_allows_public_hosts_except_denylist"
-                                "--skip" "evaluate_host_policy_emits_domain_event_for_decider_ask"
-                                "--skip" "evaluate_host_policy_emits_domain_event_for_decider_allow_override"
-                                "--skip" "http_connect_accept_blocks_in_limited_mode"
-                                "--skip" "http_connect_accept_allows_allowlisted_host_in_full_mode"
-                                "--skip" "mitm_policy_blocks_disallowed_method_and_records_telemetry"
-                                ;;; END DNS failure / NotAllowedLocal
-                                ;;; BEGIN Flaky: wiremock mock expects
-                                ;;; 1 POST to /codex/safety/arc but
-                                ;;; receives 0.  Passes in some builds,
-                                ;;; fails in others with identical code
-                                ;;; and env.  The identical custom_
-                                ;;; variant always passes; only the
-                                ;;; CODEX_APPS_MCP_SERVER_NAME variant
-                                ;;; flakes, suggesting a timing race
-                                ;;; in the async POST under contention.
-                                "--skip" "approve_mode_blocks_when_arc_returns_interrupt_for_model"
-                                "--skip" "approve_mode_blocks_when_arc_returns_interrupt_without_annotations"
-                                ;;; END ARC monitor flake
-                                ;;; BEGIN nss-certs sets SSL_CERT_FILE
-                                ;;; which makes build_reqwest_client load
-                                ;;; 171 CA certs via add_root_certificate.
-                                ;;; This changes the reqwest TLS backend
-                                ;;; configuration; the ARC safety POST to
-                                ;;; the localhost mock server never arrives
-                                ;;; (wiremock expects 1 request, gets 0).
-                                "--skip" "approve_mode_blocks_when_arc_returns_interrupt_for_model"
-                                "--skip" "approve_mode_blocks_when_arc_returns_interrupt_without_annotations"
-                                ;;; END nss-certs / ARC monitor
-                                ;; Upstream bug: JsonRpcConnection has
-                                ;; no websocket keepalive or read timeout.
-                                ;; When the exec-server is killed, the
-                                ;; client's reader task blocks on
-                                ;; websocket_reader.next() forever because
-                                ;; TCP doesn't detect the dead peer without
-                                ;; a write or keepalive probe.  Previously
-                                ;; masked because empty env made "sleep 10"
-                                ;; fail instantly; with PATH the process
-                                ;; lives long enough to hit the deadlock.
-                                "--skip" "remote_exec_process_reports_transport_disconnect"
-                                ;; 500 ms timeout on MCP list response
-                                ;; (mcp_server_status.rs timeout at
-                                ;; Duration::from_millis(500)).  With
-                                ;; nss-certs TLS now works, so the
-                                ;; startup plugin sync HTTP requests
-                                ;; (chatgpt.com, api.github.com) wait
-                                ;; for TCP timeout instead of failing
-                                ;; instantly at TLS, eating the budget.
-                                "--skip" "mcp_server_status_list_tools_and_auth_only_skips_slow_inventory_calls"
-                                ;;; BEGIN Stack overflow in 'current_thread'
-                                ;;; tokio runtime.  The sibling tests in
-                                ;;; tracing_tests.rs use the local helper
-                                ;;; run_current_thread_test_with_stack
-                                ;;; (4 MiB) but this one uses bare
-                                ;;; #[tokio::test] on the 2 MiB default
-                                ;;; test-thread stack, and TurnStart's
-                                ;;; future graph exceeds it.  With
-                                ;;; RUST_MIN_STACK raised the overflow is
-                                ;;; gone but the test then deterministically
-                                ;;; times out waiting for a span tagged
-                                ;;; codex.op = "user_input" on the remote
-                                ;;; trace that upstream never emits on that
-                                ;;; trace in our environment.
-                                "--skip" "turn_start_jsonrpc_span_parents_core_turn_spans"
-                                ;;; END tracing test stack/timeout
-                                ;;; BEGIN The upstream loader resolves the
-                                ;;; MCP OAuth credentials store mode by
-                                ;;; calling
-                                ;;; resolve_mcp_oauth_credentials_store_mode
-                                ;;; with env!("CARGO_PKG_VERSION") -- which
-                                ;;; in the released 0.124.0 tarball is
-                                ;;; "0.124.0".  These fixture tests
-                                ;;; construct the expected Config by
-                                ;;; passing the LOCAL_DEV_BUILD_VERSION
-                                ;;; constant ("0.0.0") to the same
-                                ;;; resolver, and the resolver only returns
-                                ;;; File for "0.0.0" -- Auto otherwise.
-                                ;;; Upstream CI builds from a checkout
-                                ;;; still carrying version = "0.0.0" so the
-                                ;;; tests pass there; they cannot pass
-                                ;;; against a released tag.
-                                "--skip" "test_precedence_fixture_with_gpt3_profile"
-                                "--skip" "test_precedence_fixture_with_gpt5_profile"
-                                "--skip" "test_precedence_fixture_with_o3_profile"
-                                "--skip" "test_precedence_fixture_with_zdr_profile"
-                                ;;; END LOCAL_DEV_BUILD_VERSION fixture mismatch
-                                ;;; BEGIN Verifies that Codex's user-shell
-                                ;;; spawn produces a child where
-                                ;;; CODEX_SANDBOX_NETWORK_DISABLED is unset
-                                ;;; (asserts stdout == "not-set").  We
-                                ;;; deliberately set that env var at the
-                                ;;; check phase to trigger upstream's
-                                ;;; skip_if_no_network! guards; the var then
-                                ;;; leaks into the spawned shell and the
-                                ;;; assertion fails.  The guix skip is a
-                                ;;; direct cost of the network-gate fix --
-                                ;;; trading one broken test for two that
-                                ;;; now skip cleanly.
-                                "--skip" "user_shell_command_does_not_set_network_sandbox_env_var"
-                                ;;; END CODEX_SANDBOX_NETWORK_DISABLED leak
-                                ;;; BEGIN The exec-server/tests/file_system
-                                ;;; integration tests invoke the real
-                                ;;; system bwrap, which tries to execvp the
-                                ;;; test binary at the cargo target path
-                                ;;; under the build dir.  Same root cause
-                                ;;; as the existing
-                                ;;; sandbox_reenables_writable_subpaths_under_unreadable_parents
-                                ;;; skip: guix builds live under /tmp but
-                                ;;; bwrap's mount namespace excludes /tmp,
-                                ;;; making the binary invisible inside the
-                                ;;; namespace.
-                                "--skip" "file_system_copy_preserves_symlink_source"
-                                "--skip" "file_system_copy_rejects_symlink_escape_destination"
-                                "--skip" "file_system_copy_rejects_symlink_escape_source"
-                                "--skip" "file_system_create_directory_rejects_symlink_escape"
-                                "--skip" "file_system_read_directory_rejects_symlink_escape"
-                                "--skip" "file_system_remove_rejects_symlink_escape"
-                                "--skip" "file_system_remove_removes_symlink_not_target"
-                                "--skip" "file_system_sandboxed_read_allows_readable_root"
-                                "--skip" "file_system_sandboxed_read_rejects_symlink_escape"
-                                "--skip" "file_system_sandboxed_read_rejects_symlink_parent_dotdot_escape"
-                                "--skip" "file_system_sandboxed_write_allows_additional_write_root"
-                                "--skip" "file_system_sandboxed_write_rejects_symlink_escape"
-                                "--skip" "file_system_sandboxed_write_rejects_unwritable_path"
-                                ;;; END bwrap-cant-see-/tmp file_system tests
-                                ;;; BEGIN Landlock is unavailable on Guix,
-                                ;;; so the sandbox cannot deny network
-                                ;;; syscalls.  These tests expect
-                                ;;; SandboxErr::Denied for the nc, ping,
-                                ;;; ssh, getent, and dev_tcp_redirection
-                                ;;; commands but those commands instead
-                                ;;; block on connect() until the test's 2s
-                                ;;; timeout fires (Timeout, exit 124).
-                                ;;; Same root cause as the Landlock skips
-                                ;;; at the top of this list; new test names
-                                ;;; in 0.124.
-                                "--skip" "sandbox_blocks_nc"
-                                "--skip" "sandbox_blocks_ping"
-                                "--skip" "sandbox_blocks_dev_tcp_redirection"
-                                "--skip" "sandbox_blocks_getent"
-                                "--skip" "sandbox_blocks_ssh"
-                                ;;; END Landlock network block
-                                ;;; BEGIN Requires github.com network access.
-                                ;;; With no "extraKnownMarketplaces" entry
-                                ;;; in settings.json,
-                                ;;; collect_marketplace_import_sources
-                                ;;; inserts a fallback entry for the
-                                ;;; "claude-plugins-official" marketplace
-                                ;;; pointing at the github shorthand
-                                ;;; "anthropics/claude-plugins-official".
-                                ;;; add_marketplace -> parse_marketplace_source
-                                ;;; expands that to a github.com/.git URL
-                                ;;; and clone_git_source runs 'git clone'.
-                                ;;; The Guix build sandbox has no network,
-                                ;;; so the clone fails and the marketplace
-                                ;;; lands in failed_marketplaces.  No mock
-                                ;;; cloner is injected via
-                                ;;; ExternalAgentConfigService::new_for_test,
-                                ;;; so there is no in-tree way to satisfy
-                                ;;; the test offline.
-                                "--skip" "import_plugins_infers_claude_official_marketplace_when_missing_from_settings"
-                                ;;; END github.com network access
-                                ;;; BEGIN Async race between the rollout
-                                ;;; writer task and a direct SQLite read.
-                                ;;; The test calls
-                                ;;; update_memory_settings_with_app_server,
-                                ;;; which routes through the in-memory
-                                ;;; thread path on the app-server's
-                                ;;; ThreadMemoryModeSet handler ->
-                                ;;; Session::set_thread_memory_mode ->
-                                ;;; persist_thread_memory_mode_update,
-                                ;;; which writes a RolloutItem::SessionMeta
-                                ;;; with the new mode to the rollout file
-                                ;;; via recorder.record_items + flush.  The
-                                ;;; rollout writer task then asynchronously
-                                ;;; calls sync_thread_state_after_write,
-                                ;;; which calls state_db::apply_rollout_items
-                                ;;; to mirror the SessionMeta into SQLite.
-                                ;;; flush() only awaits the rollout-file
-                                ;;; write, not the subsequent SQLite sync.
-                                ;;; The test opens a fresh StateRuntime and
-                                ;;; reads get_thread_memory_mode
-                                ;;; immediately, so it observes the creation
-                                ;;; default of "enabled" written by
-                                ;;; upsert_thread_with_creation_memory_mode
-                                ;;; instead of the new "disabled".  Upstream
-                                ;;; CI wins this race; we lose.
-                                "--skip" "update_memory_settings_updates_current_thread_memory_mode"
-                                ;;; END memory-mode rollout/sqlite race
-                                ;;; BEGIN The Stopwatch::new constructor in
-                                ;;; codex_shell_escalation anchors
-                                ;;; T0 = Instant::now() at construction;
-                                ;;; the spawned cancellation task fires at
-                                ;;; T0 + limit.  The test captures
-                                ;;; start = Instant::now() at T1 > T0 (after
-                                ;;; cancellation_token() returns) and
-                                ;;; asserts start.elapsed() >= limit,
-                                ;;; i.e. (T0 + limit) - T1 >= limit, which
-                                ;;; is always false by the offset T1 - T0.
-                                ;;; The test only passes when scheduler
-                                ;;; jitter on the sleep wakeup happens to
-                                ;;; exceed that offset.  Upstream wins the
-                                ;;; race; we don't always.
-                                "--skip" "cancellation_receiver_fires_after_limit"
-                                ;;; END Stopwatch construction/start offset race
-                                )
       #:cargo-package-crates
       ''(;;; Tier 0: No internal deps.
-         "codex-ansi-escape"
          "codex-async-utils"
-         "codex-backend-openapi-models"
          "codex-client"
          "codex-execpolicy"
          "codex-file-search"
-         "codex-git-utils"
+         "codex-git"
          "codex-keyring-store"
-         "codex-process-hardening"
          "codex-utils-absolute-path"
          "codex-utils-cache"
          "codex-utils-cargo-bin"
-         "codex-utils-elapsed"
-         "codex-utils-fuzzy-match"
          "codex-utils-home-dir"
          "codex-utils-json-to-toml"
-         "codex-utils-path"
-         "codex-utils-plugins"
          "codex-utils-pty"
          "codex-utils-readiness"
-         "codex-utils-rustls-provider"
-         "codex-utils-sleep-inhibitor"
-         "codex-utils-stream-parser"
          "codex-utils-string"
-         "codex-utils-template"
+         "codex-backend-openapi-models"
-         ;;; Tier 1.
+         "codex-process-hardening"
+         "codex-ansi-escape"
+         ;;; Tier 1: Depends on tier 0.
          "codex-utils-image"
-         "codex-utils-output-truncation"
          "codex-apply-patch"
          "codex-protocol"
          "codex-windows-sandbox"
@@ -518,69 +226,35 @@
          "codex-secrets"
          "codex-execpolicy-legacy"
          "codex-debug-client"
-         "codex-analytics"
-         "codex-rollout"
-         "codex-rollout-trace"
-         "codex-terminal-detection"
-         "codex-utils-approval-presets"
-         "codex-utils-cli"
-         "codex-uds"
-         "codex-install-context"
-         "codex-device-key"
          ;;; Tier 2.
          "codex-app-server-protocol"
          "codex-rmcp-client"
          "codex-otel"
-         "codex-thread-store"
          "codex-state"
-         "codex-features"
-         "codex-model-provider"
-         "codex-config"
-         "codex-agent-identity"
-         "codex-aws-auth"
-         "codex-hooks"
-         "codex-code-mode"
-         "codex-feedback"
-         "codex-skills"
-         "codex-test-binary-support"
          "codex-core"
-         "codex-core-plugins"
-         "codex-utils-sandbox-summary"
          "codex-linux-sandbox"
-         "codex-sandboxing"
+         "codex-feedback"
-         "codex-connectors"
-         "codex-core-skills"
          ;;; Tier 3.
          "codex-arg0"
          "codex-lmstudio"
          "codex-login"
          "codex-ollama"
-         "codex-utils-oss"
+         "codex-common"
          "codex-mcp-server"
          "codex-backend-client"
          "codex-responses-api-proxy"
-         "codex-shell-command"
-         "codex-shell-escalation"
-         "codex-plugin"
-         "codex-model-provider-info"
-         "codex-models-manager"
          ;;; Tier 4.
          "codex-cloud-requirements"
          "codex-exec"
          "codex-exec-server"
-         "codex-network-proxy"
          "codex-stdio-to-uds"
+         "codex-network-proxy"
          "codex-chatgpt"
          "codex-cloud-tasks-client"
-         "codex-cloud-tasks-mock-client"
-         "codex-tools"
-         "codex-mcp"
-         "codex-collaboration-mode-templates"
          ;;; Tier 5.
          "codex-app-server"
          "codex-app-server-test-client"
          "codex-tui"
-         "codex-response-debug-context"
          ;;; Tier 6.
          "codex-cloud-tasks"
          ;; The main executable.
@@ -596,7 +270,7 @@
               ;; Update them to match the actual package version.
               (let ((snap-files (find-files "." "\\.snap$")))
                 (substitute* snap-files
-                  (("\\(v0\\.0\\.0\\)   ") "(v0.124.0) ")))))
+                  (("\\(v0\\.0\\.0\\) ") "(v0.98.0)")))))
           (add-after 'chdir-to-workspace 'patch-git-deps-to-vendor
             (lambda _
               ;; Replace git dependencies with version references so cargo
@@ -605,57 +279,23 @@
                 (("nucleo = \\{ git = [^}]+\\}")
                  "nucleo = \"0.5.0\"")
                 (("runfiles = \\{ git = [^}]+\\}")
-                 "runfiles = \"0.1.0\""))
+                 "runfiles = \"0.1.0\""))))
-              ;; Remove workspace members that have unbuildable deps
+          (add-after 'chdir-to-workspace 'add-version-to-workspace-deps
-              ;; (v8-poc requires V8).  code-mode stays a workspace member
-              ;; so its codex-protocol resolves to the same local copy as
-              ;; the rest of the build; disabling its default features
-              ;; (below) avoids pulling in V8.
-              (substitute* "Cargo.toml"
-                (("\"v8-poc\",") ""))
-              ;; Disable V8 runtime in codex-code-mode by turning off
-              ;; default features.  Keep path= so code-mode is resolved
-              ;; from the local source tree and shares codex-protocol
-              ;; (and other workspace crates) with the rest of the build;
-              ;; resolving it from the vendor instead introduces a
-              ;; duplicate codex-protocol and causes E0308 type
-              ;; mismatches in codex-tools.
-              (substitute* "Cargo.toml"
-                (("codex-code-mode = \\{ path = \"code-mode\" \\}")
-                 "codex-code-mode = { path = \"code-mode\", default-features = false }"))
-              ;; cargo build at workspace root ignores per-dep
-              ;; default-features=false and builds code-mode with its
-              ;; own default features, which include v8-runtime and
-              ;; would pull in V8.  Make the default feature empty.
-              (substitute* "code-mode/Cargo.toml"
-                (("^default = \\[\"v8-runtime\"\\]") "default = []"))))
-          (add-after 'patch-git-deps-to-vendor 'add-version-to-workspace-deps
             (lambda _
               ;; cargo package requires all dependencies to have versions.
-              ;; Add version = "0.124.0" to internal path dependencies.
+              ;; cargo package requires all dependencies to have versions.
+              ;; Add version = "0.98.0" to internal path dependencies.
               (let ((cargo-files (find-files "." "^Cargo\\.toml$")))
                 (substitute* cargo-files
                   ;; Handle inline deps: name = { path = "..." }
                   (("(codex-[a-z0-9-]+) = \\{ path = " all name)
-                   (string-append name " = { version = \"0.124.0\", path = "))
+                   (string-append name " = { version = \"0.98.0\", path = "))
                   ;; Handle inline deps with package: name = { package = "...", path = "..." }
                   (("(codex-[a-z0-9-]+) = \\{ package = " all name)
-                   (string-append name " = { version = \"0.124.0\", package = "))
+                   (string-append name " = { version = \"0.98.0\", package = "))
                   ;; Handle section deps: [dependencies.X] with path = "..."
                   (("^(path = \"\\.\\./[^\"]*\")" all path-line)
-                   (string-append path-line "\nversion = \"0.124.0\""))))))
+                   (string-append path-line "\nversion = \"0.98.0\""))))))
-          (add-after 'chdir-to-workspace 'use-gnu-store-in-sandbox
-            (lambda _
-              ;; LINUX_PLATFORM_DEFAULT_READ_ROOTS in linux-sandbox/src/
-              ;; bwrap.rs is the read-only baseline that codex's bwrap
-              ;; sandbox bind-mounts so commands can read /usr/bin/ls,
-              ;; libc, etc.  Upstream lists "/nix/store" for NixOS;
-              ;; Guix's equivalent is "/gnu/store".  Without this swap,
-              ;; the codex sandbox cannot locate any binaries on a Guix
-              ;; system because every "system" path resolves into
-              ;; /gnu/store/<hash>-pkg/bin/...
-              (substitute* "linux-sandbox/src/bwrap.rs"
-                (("\"/nix/store\"") "\"/gnu/store\""))))
           (add-after 'chdir-to-workspace 'patch-hardcoded-paths
             (lambda* (#:key inputs #:allow-other-keys)
               (let ((bash-bin (string-append
@@ -685,14 +325,6 @@
                    (string-append "\"" bash-bin "/bash "))
                   (("\"/bin/sh ")
                    (string-append "\"" bash-bin "/sh "))
-                  ;; Single-quoted paths in test assertion strings,
-                  ;; e.g. "exec '/bin/bash' -c ...".  Must match the
-                  ;; double-quoted substitutions above so both sides
-                  ;; of assert_eq!/contains use the store path.
-                  (("'/bin/bash'")
-                   (string-append "'" bash-bin "/bash'"))
-                  (("'/bin/sh'")
-                   (string-append "'" bash-bin "/sh'"))
                   ;; coreutils.
                   (("\"/bin/(cat|cp|date|echo|head|ls|rm|sleep|true|touch)\"" all cmd)
                    (string-append "\"" coreutils-bin "/" cmd "\""))
@@ -707,150 +339,42 @@
                    (string-append "\"" git-bin "/git\""))
                   (("\"/usr/bin/sed\"")
                    (string-append "\"" sed-bin "/sed\"")))
-                ;; Bare Command::new("git") and Command::new("ls")
-                ;; in codex source files that exec internally.
-                (substitute* (find-files "git-utils" "\\.rs$")
-                  (("Command::new\\(\"git\"\\)")
-                   (string-append "Command::new(\"" git-bin "/git\")")))
-                (substitute* "tui/src/get_git_diff.rs"
-                  (("Command::new\\(\"git\"\\)")
-                   (string-append "Command::new(\"" git-bin "/git\")")))
-                (substitute* "core/src/turn_diff_tracker.rs"
-                  (("Command::new\\(\"git\"\\)")
-                   (string-append "Command::new(\"" git-bin "/git\")")))
-                (substitute* "cloud-tasks/src/env_detect.rs"
-                  (("Command::new\\(\"git\"\\)")
-                   (string-append "Command::new(\"" git-bin "/git\")")))
-                (substitute* "core/src/plugins/startup_sync.rs"
-                  (("\"git\",")
-                   (string-append "\"" git-bin "/git\",")))
-                (substitute* "file-search/src/lib.rs"
-                  (("Command::new\\(\"ls\"\\)")
-                   (string-append "Command::new(\"" coreutils-bin "/ls\")")))
-                ;; Neutralize pager with absolute path to cat.
-                (substitute* "core/src/unified_exec/process_manager.rs"
-                  (("\"PAGER\", \"cat\"")
-                   (string-append "\"PAGER\", \"" coreutils-bin "/cat\""))
-                  (("\"GIT_PAGER\", \"cat\"")
-                   (string-append "\"GIT_PAGER\", \"" coreutils-bin "/cat\""))
-                  (("\"GH_PAGER\", \"cat\"")
-                   (string-append "\"GH_PAGER\", \"" coreutils-bin "/cat\"")))
-                ;; Bare /bin/sleep inside a format! string
-                ;; (no surrounding double quotes, so the main
-                ;; pattern does not match).
-                (substitute*
-                  "shell-escalation/src/unix/escalate_server.rs"
-                  (("/bin/sleep")
-                   (string-append coreutils-bin "/sleep")))
                 ;; @SHELL@ placeholder from test-shebangs patch
                 (substitute*
                   (list "rmcp-client/src/program_resolver.rs"
                         "tui/src/external_editor.rs")
                   (("@SHELL@")
                    (string-append bash-bin "/sh")))
-                ;; Shebangs inside raw string literals (r#"..."#)
+                ;; shebang in test-only file
-                ;; that are written to scripts at runtime.  The
-                ;; main "/bin/sh" patterns only match double-quoted
-                ;; occurrences; these shebangs have no surrounding
-                ;; double quotes.
                 (substitute*
-                  (list "core/src/plugins/startup_sync_tests.rs"
+                  "core/tests/suite/user_notification.rs"
-                        "core/src/tools/runtimes/shell/unix_escalation_tests.rs"
-                        "core/tests/suite/client.rs"
-                        "core/tests/suite/js_repl.rs"
-                        "core/tests/suite/skill_approval.rs"
-                        "core/tests/suite/user_notification.rs"
-                        "exec-server/tests/file_system.rs"
-                        "login/src/auth/auth_tests.rs"
-                        "models-manager/src/manager_tests.rs"
-                        "sandboxing/src/bwrap_tests.rs")
                   (("#!/bin/bash")
-                   (string-append "#!" bash-bin "/bash"))
+                   (string-append "#!" bash-bin "/bash"))))))
-                  (("#!/bin/sh")
-                   (string-append "#!" bash-bin "/sh")))
-                ;; Test helpers pass env: Default::default() to the
-                ;; spawn code which calls env_clear(), leaving
-                ;; processes with no PATH.  Inject the build-time
-                ;; PATH so tests find coreutils, bash, etc.
-                (substitute* (find-files "." "\\.rs$")
-                  (("env: Default::default\\(\\)")
-                   (string-append
-                    "env: std::env::var(\"PATH\")"
-                    ".into_iter()"
-                    ".map(|p| (\"PATH\".to_string(), p))"
-                    ".collect()")))
-                ;; Test-only absolute path; bare name works via PATH.
-                (substitute* "exec-server/tests/exec_process.rs"
-                  (("\"/usr/bin/python3\"")
-                   "\"python3\""))
-                ;; Same empty-env issue but in JSON literals
-                ;; (serde_json::json! macro).
-                (substitute* "exec-server/tests/process.rs"
-                  (("\"env\": \\{\\}")
-                   (string-append
-                    "\"env\": {\"PATH\": \""
-                    (getenv "PATH")
-                    "\"}"))))))
-          (add-before 'build 'set-bubblewrap-source
-            (lambda* (#:key inputs #:allow-other-keys)
-              (setenv "CODEX_BWRAP_SOURCE_DIR"
-                      (string-append
-                       (assoc-ref inputs "bubblewrap-source")
-                       "/"))))
-          (add-before 'build 'create-node-version-file
-            (lambda _
-              (call-with-output-file "guix-vendor/node-version.txt"
-                (lambda (port)
-                  (display "22.22.0" port)))))
           (add-before 'check 'set-home
             (lambda _
-              ;; HOME must not be a prefix of /tmp, otherwise
+              (setenv "HOME" "/tmp")
-              ;; the TUI's path shortener replaces /tmp/... with
+              (setenv "USER" "nixbld"))))))
-              ;; ~/... and 30 snapshot tests fail.
+    (native-inputs (list clang              ;bindgen uses libclang to parse BoringSSL's C headers
-              (setenv "HOME" "/tmp/guix-home")
+                         cmake-minimal    ;BoringSSL is compiled from C source
-              (mkdir-p "/tmp/guix-home")
+                         libunwind        ;BoringSSL tests verify stack unwinding in assembly
-              (setenv "USER" "nixbld")
+                         perl python-minimal ;for tests
-              ;; Default libtest thread stack is 2 MiB, which is not
+                         pkg-config))
-              ;; enough for tokio current_thread tests that drive
-              ;; codex-core's full turn pipeline.  Upstream gates such
-              ;; tests through run_current_thread_test_with_stack (4 MiB)
-              ;; in app-server/src/message_processor/tracing_tests.rs;
-              ;; raise the global default so future additions that
-              ;; forget the wrapper still pass.
-              (setenv "RUST_MIN_STACK" "8388608")
-              ;; Disable network access.
-              (setenv "CODEX_SANDBOX_NETWORK_DISABLED" "1"))))))
-    (native-inputs `(("bubblewrap" ,bubblewrap) ;tests need bwrap on PATH
-                     ("clang" ,clang)
-                     ("cmake-minimal" ,cmake-minimal)
-                     ("libunwind" ,libunwind)
-                     ("lsof" ,lsof)            ;app-server tests
-                     ("nss-certs-for-test" ,nss-certs-for-test) ;OTLP gRPC TLS
-                     ("perl" ,perl)
-                     ("procps" ,procps)         ;tests use ps
-                     ("python-minimal" ,python-minimal)
-                     ("pkg-config" ,pkg-config)
-                     ("bubblewrap-source" ,(package-source bubblewrap))))
     (inputs (cons* bash-minimal coreutils git-minimal sed
-                   libcap oniguruma openssl sqlite zlib `(,zstd "lib")
+                   openssl sqlite `(,zstd "lib")
                    (cargo-inputs 'codex)))
-    (properties '((timeout . 108000) ; 30  hours
-                  (max-silent-time . 54000))) ; 15 hours
     (home-page "https://github.com/openai/codex")
     (synopsis "AI-assisted coding CLI and TUI")
     (description
      "Codex is an AI-powered coding assistant that runs in the terminal.
 It provides an interactive TUI for conversations with AI models, with
 support for shell command execution, file editing, and code generation.
-Configure providers via @file{~/.codex/config.toml}.
+Configure providers via @file{~/.codex/config.toml}.")
-
-codex-code-mode's V8 Javascript executor is disabled.")
     (license license:asl2.0)))
 
 (define-public codex-acp
   (package
     (name "codex-acp")
-    (version "0.11.1")
+    (version "0.9.2")
     (source
      (origin
        (method git-fetch)
@@ -859,8 +383,9 @@ codex-code-mode's V8 Javascript executor is disabled.")
              (commit (string-append "v" version))))
        (file-name (git-file-name name version))
        (sha256
-        (base32 "1rlgkbvrbdl5jhf49sjn2mifn2rq6z0vwf0gard23y1bz6sr3wmr"))
+        (base32 "190sq6s6jfz8dkj1y8305r7x6ln86qqr2j1bnfjci7f1x2wyzmsj"))
-       (patches (search-patches "codex-acp-0.11.1-remove-patch-sections.patch"))))
+       (patches (search-patches "codex-acp-0.9.2-remove-patch-sections.patch"
+                                "codex-acp-0.9.2-replace-result-flatten.patch"))))
     (build-system cargo-build-system)
     (arguments
      (list
@@ -868,43 +393,13 @@ codex-code-mode's V8 Javascript executor is disabled.")
       #:phases
       #~(modify-phases %standard-phases
           (add-after 'unpack 'patch-codex-deps
-            (lambda* (#:key inputs #:allow-other-keys)
+            (lambda _
               ;; Rewrite git dependencies to use vendored sources from rust-codex
               (substitute* "Cargo.toml"
-                (("git = \"https://github.com/openai/codex\", tag = \"rust-v0.117.0\"")
+                (("git = \"https://github.com/zed-industries/codex\", branch = \"acp\"")
-                 "version = \"0.117.0\""))
+                 "version = \"0.0.0\"")))))))
-              ;; Disable V8 runtime in codex-code-mode (transitive dep).
+    (native-inputs (list pkg-config))
-              (let ((port (open-file "Cargo.toml" "a")))
+    (inputs (cons* openssl sqlite `(,zstd "lib") (cargo-inputs 'codex-acp)))
-                (display "
-[dependencies.codex-code-mode]
-version = \"0.117.0\"
-default-features = false
-" port)
-                (close-port port))
-              ;; Point codex-linux-sandbox at system bubblewrap source.
-              (setenv "CODEX_BWRAP_SOURCE_DIR"
-                      (string-append
-                       (assoc-ref inputs "bubblewrap-source")
-                       "/"))))
-          (add-before 'check 'set-home
-            (lambda _
-              (setenv "HOME" "/tmp")
-              (setenv "USER" "nixbld")))
-          (add-before 'build 'create-node-version-file
-            (lambda _
-              ;; codex-core's js_repl uses include_str! to read
-              ;; node-version.txt four directories up from its source;
-              ;; create it where the vendored crate expects it.
-              (call-with-output-file "guix-vendor/node-version.txt"
-                (lambda (port)
-                  (display "22.22.0" port))))))))
-    (native-inputs
-     `(("cmake-minimal" ,cmake-minimal)
-       ("clang" ,clang)
-       ("pkg-config" ,pkg-config)
-       ("bubblewrap-source" ,(package-source bubblewrap))))
-    (inputs (cons* libcap openssl sqlite zlib `(,zstd "lib")
-                   (cargo-inputs 'codex-acp)))
     (home-page "https://github.com/zed-industries/codex-acp")
     (synopsis "ACP-compatible agent bridging Zed Codex with ACP clients")
     (description

gnu/packages/commencement.scm

@@ -42,7 +42,7 @@
   #:use-module (gnu packages m4)
   #:use-module (gnu packages gawk)
   #:use-module (gnu packages bison)
-  #:use-module (gnu packages compiler-tools)
+  #:use-module (gnu packages flex)
   #:use-module (gnu packages guile)
   #:use-module (gnu packages gettext)
   #:use-module (gnu packages multiprecision)

gnu/packages/compiler-tools.scm

@@ -1,216 +0,0 @@
-;;; GNU Guix --- Functional package management for GNU
-;;; Copyright © 2012-2014, 2019, 2022 Ludovic Courtès <ludo@gnu.org>
-;;; Copyright © 2016, 2024-2025 Efraim Flashner <efraim@flashner.co.il>
-;;; Copyright © 2017, 2020, 2021 Sergei Trofimovich <slyfox@inbox.ru>
-;;; Copyright © 2018, 2022 Tobias Geerinckx-Rice <me@tobias.gr>
-;;; Copyright © 2021 Foo Chuan Wei <chuanwei.foo@hotmail.com>
-;;; Copyright © 2024 Janneke Nieuwenhuizen <janneke@gnu.org>
-;;; Copyright © 2025 Alexey Abramov <levenson@mmer.org>
-;;; Copyright © 2025 Anderson Torres <anderson.torres.8519@gmail.com>
-;;;
-;;; This file is part of GNU Guix.
-;;;
-;;; GNU Guix is free software; you can redistribute it and/or modify it
-;;; under the terms of the GNU General Public License as published by
-;;; the Free Software Foundation; either version 3 of the License, or (at
-;;; your option) any later version.
-;;;
-;;; GNU Guix is distributed in the hope that it will be useful, but
-;;; WITHOUT ANY WARRANTY; without even the implied warranty of
-;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
-;;; GNU General Public License for more details.
-;;;
-;;; You should have received a copy of the GNU General Public License
-;;; along with GNU Guix.  If not, see <http://www.gnu.org/licenses/>.
-
-(define-module (gnu packages compiler-tools)
-  #:use-module (gnu packages autotools)
-  #:use-module (gnu packages bison)
-  #:use-module (gnu packages gawk)
-  #:use-module (gnu packages m4)
-  #:use-module (gnu packages man)
-  #:use-module (gnu packages python)
-  #:use-module (gnu packages)
-  #:use-module (guix build-system gnu)
-  #:use-module (guix build-system trivial)
-  #:use-module (guix download)
-  #:use-module (guix gexp)
-  #:use-module (guix git-download)
-  #:use-module ((guix licenses) #:prefix license:)
-  #:use-module (guix packages)
-  #:use-module (guix utils)
-  #:use-module (srfi srfi-1))
-
-(define-public byacc
-  (package
-    (name "byacc")
-    (version "20240109")
-    (source
-     (origin
-       (method url-fetch)
-       (uri (string-append
-             "https://invisible-mirror.net/archives/byacc/byacc-"
-             version ".tgz"))
-       (sha256
-        (base32
-         "0il4w1vwbglayakywyghiqhcjpg1yvv5ww2p8ylz32bi05wpg2gj"))
-       (snippet
-        #~(begin
-            ;; Remove machine-generated files
-            (for-each delete-file
-                      (list "configure"
-                            "btyaccpar.c"
-                            "yaccpar.c"))))))
-    (build-system gnu-build-system)
-    (native-inputs
-     (list autoconf
-           automake
-           gawk))
-    (home-page "https://invisible-island.net/byacc/byacc.html")
-    (synopsis "Berkeley Yacc LALR parser generator")
-    (description
-     "Berkeley Yacc is an LALR(1) parser generator.  Yacc reads the grammar
-specification from a file and generates an LALR(1) parser for it.  The parsers
-consist of a set of LALR(1) parsing tables and a driver routine written in the
-C programming language.")
-    (license license:public-domain)))
-
-(define-public flex
-  (package
-    (name "flex")
-    (version "2.6.4")
-    (source
-     (origin
-       (method url-fetch)
-       (uri (string-append
-             "https://github.com/westes/flex"
-             "/releases/download/v" version "/"
-             "flex-" version ".tar.gz"))
-       (sha256
-        (base32
-         "15g9bv236nzi665p9ggqjlfn4dwck5835vf0bbw2cz7h5c1swyp8"))))
-    (build-system gnu-build-system)
-    (arguments
-     (if (%current-target-system)
-         (list #:configure-flags
-               #~'("ac_cv_func_malloc_0_nonnull=yes"
-                   "ac_cv_func_realloc_0_nonnull=yes"))
-         '()))
-    (native-inputs
-     (list help2man
-           ;; m4 is not present in PATH when cross-building
-           m4))
-    (inputs
-     (list
-      (package
-        (inherit bison)
-        (arguments
-         ;; Disable tests, since they require flex.
-         (substitute-keyword-arguments arguments
-           ((#:tests? _ #f) #f)))
-        (inputs (modify-inputs inputs
-                  (delete "flex"))))))
-    (propagated-inputs (list m4))
-    (home-page "https://github.com/westes/flex")
-    (synopsis "Fast lexical analyser generator")
-    (description
-     "Flex is a tool for generating scanners.  A scanner, sometimes
-called a tokenizer, is a program which recognizes lexical patterns in
-text.  The flex program reads user-specified input files, or its standard
-input if no file names are given, for a description of a scanner to
-generate.  The description is in the form of pairs of regular expressions
-and C code, called rules.  Flex generates a C source file named,
-\"lex.yy.c\", which defines the function yylex().  The file \"lex.yy.c\"
-can be compiled and linked to produce an executable.  When the executable
-is run, it analyzes its input for occurrences of text matching the
-regular expressions for each rule.  Whenever it finds a match, it
-executes the corresponding C code.")
-    (license (license:non-copyleft "file://COPYING"
-                                   "See COPYING in the distribution."))))
-
-(define-public oyacc
-  (package
-    (name "oyacc")
-    (version "6.6")
-    (source
-     (origin
-       (method git-fetch)
-       (uri (git-reference
-              (url "https://github.com/ibara/yacc")
-              (commit (string-append name "-" version))))
-       (file-name (git-file-name name version))
-       (sha256
-        (base32 "1a2nyg2nnh1las40klnp037sapaaph86kjx258cpqcwnk4cv3rnx"))))
-    (build-system gnu-build-system)
-    (arguments
-     (list
-      #:test-target "test"
-      #:make-flags
-      #~(list (string-append "BINDIR=" #$output "/bin")
-              (string-append "MANDIR=" #$output "/share/man/man1"))))
-    (home-page "https://github.com/ibara/yacc")
-    (synopsis "Portable YACC from OpenBSD")
-    (description
-     "@command{oyacc} is a portable version of the OpenBSD's
-@acronym{yacc, Yet Another Compiler Compiler} program, with no dependencies
-besides libc.")
-    (license license:bsd-2)))
-
-(define-public oyacc-as-yacc-wrapper
-  (package/inherit oyacc
-    (name "oyacc-as-yacc-wrapper")
-    (build-system trivial-build-system)
-    (arguments
-     (list
-      #:builder
-      (with-imported-modules '((guix build utils))
-        #~(begin
-            (use-modules (guix build utils))
-            (let ((bindir (string-append #$output "/bin"))
-                  (oyacc (string-append #$(this-package-input "oyacc")
-                                        "/bin/oyacc")))
-              (mkdir-p bindir)
-              (symlink oyacc (string-append bindir "/yacc")))))))
-    (inputs (list oyacc))
-    (description
-     "This package provides the @command{yacc} command, implemented as a
-symbolic link to the @command{oyacc} command from the same-named package.")))
-
-(define-public re2c
-  (package
-    (name "re2c")
-    (version "4.2")
-    (source
-     (origin
-       (method url-fetch)
-       (uri (string-append "https://github.com/skvadrik/" name
-                           "/releases/download/" version "/"
-                           name "-" version ".tar.xz"))
-       (sha256
-        (base32
-         "07ysqgdm0h566a8lwnpdgycp93vz7zskzihsgah3bla0ycj2pp69"))))
-    (build-system gnu-build-system)
-    (arguments
-     (list
-      #:tests?
-      (not (or (%current-target-system)
-               ;; TODO: run_tests.py hangs
-               (system-hurd?)))
-      #:phases
-      (if (target-arm32?)
-          #~(modify-phases %standard-phases
-              (add-after 'unpack 'patch-sources
-                (lambda _
-                  (invoke "patch" "-p1" "--force" "--input"
-                          #$(local-file (search-patch
-                                         "re2c-Use-maximum-alignment.patch"))))))
-          #~%standard-phases)))
-    (native-inputs
-     (list python))             ; for the test driver
-    (home-page "https://re2c.org/")
-    (synopsis "Lexer generator")
-    (description
-     "@code{re2c, Regular Expressions to Code} is a flexible lexical analyser.
-Instead of using traditional table-driven approaches, it encodes a finite
-state machine directly in the code in the form of jumps and comparisons.")
-    (license license:public-domain)))

gnu/packages/compression.scm

@@ -42,7 +42,6 @@
 ;;; Copyright © 2024 David Elsing <david.elsing@posteo.net>
 ;;; Copyright © 2024 Artyom V. Poptsov <poptsov.artyom@gmail.com>
 ;;; Copyright © 2024, 2025 Zheng Junjie <873216071@qq.com>
-;;; Copyright © 2026 Jake Forster <jakecameron.forster@gmail.com>
 ;;;
 ;;; This file is part of GNU Guix.
 ;;;
@@ -1476,7 +1475,7 @@ for most inputs, but the resulting compressed files are anywhere from 20% to
 (define-public 7zip
   (package
     (name "7zip")
-    (version "26.01")
+    (version "26.00")
     (source
      (origin
        (method git-fetch)
@@ -1484,7 +1483,7 @@ for most inputs, but the resulting compressed files are anywhere from 20% to
               (url "https://github.com/ip7z/7zip")
               (commit version)))
        (sha256
-        (base32 "0qwzn9pz1m6f8q20cqgmfqp1qx6s7959xnyikpr60n1v8c1mj98q"))
+        (base32 "1fvgl9qp2pl5c0jmvgbdx6qig3qd80mhxvml42yby8y412x65sh7"))
        (file-name (git-file-name name version))
        (modules '((guix build utils)
                   (ice-9 regex)))
@@ -2376,9 +2375,7 @@ non-Windows systems without running the actual installer using wine.")
      (sha256
       (base32 "17k679glx05v23n8kxbg9vmbf89i2252g5xj6w3dkz19asmh1zd6"))))
    (build-system gnu-build-system)
-   (native-inputs
+   (native-inputs (list autoconf automake libtool nasm))
-    (cons* autoconf automake libtool
-           (maybe-nasm)))
    (home-page "https://github.com/intel/isa-l")
    (synopsis "Intelligent storage acceleration library")
    (description "ISA-L is a collection of optimized low-level functions
@@ -3192,33 +3189,3 @@ exported by the zlib library.")
 ratio at the cost of high CPU/memory usage.")
     (home-page "https://github.com/byronknoll/cmix")
     (license license:gpl3)))
-
-(define-public zlib-ng
-  (package
-    (name "zlib-ng")
-    (version "2.3.3")
-    (source (origin
-              (method git-fetch)
-              (uri (git-reference
-                     (url "https://github.com/zlib-ng/zlib-ng")
-                     (commit version)))
-              (file-name (git-file-name name version))
-              (sha256
-               (base32
-                "0g4pxy7gc1slw9n6j583hzps32mml30f08gmmg1adsq4y3dl2cny"))))
-    (build-system cmake-build-system)
-    (native-inputs (list googletest))
-    (home-page "https://github.com/zlib-ng/zlib-ng")
-    (synopsis "Fork of the zlib data compression library")
-    (description
-     "zlib-ng is a @code{zlib} replacement with optimizations for next
-generation systems.")
-    (license license:zlib)))
-
-(define-public zlib-ng-compat
-  (package/inherit zlib-ng
-    (name "zlib-ng-compat")
-    (arguments
-     (substitute-keyword-arguments arguments
-       ((#:configure-flags flags #~(list))
-        #~(cons "-DZLIB_COMPAT=ON" #$flags))))))

gnu/packages/containers.scm

@@ -50,7 +50,6 @@
   #:use-module (gnu packages bash)
   #:use-module (gnu packages check)
   #:use-module (gnu packages compression)
-  #:use-module (gnu packages docker)
   #:use-module (gnu packages glib)
   #:use-module (gnu packages gcc)
   #:use-module (gnu packages gettext)
@@ -71,7 +70,6 @@
   #:use-module (gnu packages networking)
   #:use-module (gnu packages package-management)
   #:use-module (gnu packages pkg-config)
-  #:use-module (gnu packages prometheus)
   #:use-module (gnu packages python-xyz)
   #:use-module (gnu packages python-build)
   #:use-module (gnu packages python-check)
@@ -123,365 +121,6 @@
      "This package provides a Go library to read and manipulate checkpoint
 archives as created by Podman, CRI-O and containerd.")
     (license license:asl2.0)))
-
-(define-public go-github-com-containerd-containerd-v2
-  (package
-    (name "go-github-com-containerd-containerd-v2")
-    (version "2.2.3")
-    (source
-     (origin
-       (method git-fetch)
-       (uri (git-reference
-             (url "https://github.com/containerd/containerd")
-             (commit (string-append "v" version))))
-       (file-name (git-file-name name version))
-       (sha256
-        (base32 "0wxy5np689571s6lw77mx63nw75fx85w5svi0jplksmqzmjqp8wd"))
-       (snippet
-        #~(begin (use-modules (guix build utils))
-         (delete-file-recursively "vendor")
-            ;; Submodules with their own go.mod files and packaged separately:
-            ;;
-            ;; - github.com/containerd/containerd/api
-            (delete-file-recursively "api")))))
-    (build-system go-build-system)
-    (arguments
-     (list
-      #:skip-build? #t
-      #:import-path "github.com/containerd/containerd/v2"
-      #:test-subdirs
-      #~(list "cmd/protoc-gen-go-fieldpath/..."
-              "core/containers/..."
-              "core/content/..."
-              "core/diff"
-              "core/diff/apply"
-              "core/events/..."
-              "core/images/..."
-              "core/introspection/..."
-              "core/leases/..."
-              "core/metrics/..."
-              "core/remotes/..."
-              "core/sandbox/..."
-              "core/streaming/..."
-              "core/transfer"
-              "core/transfer/archive/..."
-              "core/transfer/image/..."
-              "core/transfer/local/..."
-              "core/transfer/plugins/..."
-              "core/transfer/streaming/..."
-              "core/unpack/..."
-              "internal/cleanup/..."
-              "internal/erofsutils/..."
-              "internal/eventq/..."
-              "internal/failpoint/..."
-              "internal/fsverity/..."
-              "internal/kmutex/..."
-              "internal/lazyregexp/..."
-              "internal/pprof/..."
-              "internal/randutil/..."
-              "internal/registrar/..."
-              "internal/tomlext/..."
-              "internal/truncindex/..."
-              "internal/userns/..."
-              "internal/wintls/..."
-              "pkg/apparmor/..."
-              "pkg/archive/..."
-              "pkg/atomicfile/..."
-              "pkg/blockio/..."
-              "pkg/cap/..."
-              "pkg/cio..."
-              "pkg/deprecation/..."
-              "pkg/dialer/..."
-              "pkg/display/..."
-              "pkg/epoch/..."
-              "pkg/fifosync/..."
-              "pkg/filters/..."
-              "pkg/gc/..."
-              "pkg/httpdbg/..."
-
-              ;; TODO: Check why these submodule fail to build.
-              ;; "client/..."
-              ;; "cmd/containerd-shim-runc-v2/..."
-              ;; "cmd/containerd-stress/..."
-              ;; "cmd/containerd/..."
-              ;; "cmd/ctr/..."
-              ;; "cmd/gen-manpages/..."
-              ;; "contrib/..."
-              ;; "core/diff/proxy"
-              ;; "core/metadata/..."
-              ;; "core/mount/..."
-              ;; "core/runtime/..."
-              ;; "core/snapshots/..."
-              ;; "core/transfer/proxy/..."
-              ;; "core/transfer/registry/..."
-              ;; "integration/..."
-              ;; "internal/cri/..."
-              ;; "internal/nri/..."
-              ;; "pkg/cdi/..."
-              #;"plugins/...")
-      #:test-flags
-      #~(list "-skip" (string-join
-                      ;; panic: cannot statfs cgroup root [recovered]
-                      (list "TestValidateConfig"
-                            ;; io_test.go:40: failed to start binary process:
-                            ;; fork/exec /bin/echo: no such file or directory
-                            "TestNewBinaryIO"
-                            ;; expected success: got executable file not found in $PATH
-                            "TestExecutorWithArgs"
-                            "TestSetEnv"
-                            "TestStdIOPipes"
-                            ;; panic: cannot statfs cgroup root
-                            "TestContainerCapabilities"
-                            "TestContainerSpecTty"
-                            "TestContainerSpecReadonlyRootfs"
-                            "TestContainerSpecWithExtraMounts"
-                            "TestContainerAndSandboxPrivileged"
-                            "TestPrivilegedBindMount"
-                            "TestCgroupNamespace"
-                            "TestPidNamespace/node_namespace_mode"
-                            ;; failed to apply b: invalid argument
-                            "TestDiffTar/IgnoreSockets"
-                            "TestBinDirVerifyImage/max_verifiers_=_-1,_with_timeout"
-                            "TestContainerSpecDefaultPath"
-                            ;; Error: Not equal:
-                            ;;        expected: 1000
-                            ;;        actual  : 123
-                            "TestSetPositiveOomScoreAdjustment")
-                       "|"))))
-    (native-inputs
-     (list go-github-com-stretchr-testify))
-    (propagated-inputs
-     (list go-dario-cat-mergo
-           go-github-com-adalogics-go-fuzz-headers
-           go-github-com-checkpoint-restore-checkpointctl
-           go-github-com-checkpoint-restore-go-criu-v7
-           go-github-com-containerd-btrfs-v2
-           go-github-com-containerd-cgroups-v3
-           go-github-com-containerd-console
-           go-github-com-containerd-containerd-api
-           go-github-com-containerd-continuity
-           go-github-com-containerd-errdefs
-           go-github-com-containerd-errdefs-pkg
-           go-github-com-containerd-fifo
-           go-github-com-containerd-go-cni
-           go-github-com-containerd-go-runc
-           go-github-com-containerd-imgcrypt-v2
-           go-github-com-containerd-log
-           go-github-com-containerd-nri
-           go-github-com-containerd-otelttrpc
-           go-github-com-containerd-platforms
-           go-github-com-containerd-plugin
-           go-github-com-containerd-ttrpc
-           go-github-com-containerd-typeurl-v2
-           go-github-com-containerd-zfs-v2
-           go-github-com-containernetworking-cni
-           go-github-com-containernetworking-plugins
-           go-github-com-coreos-go-systemd-v22
-           go-github-com-davecgh-go-spew
-           go-github-com-distribution-reference
-           go-github-com-docker-go-events
-           go-github-com-docker-go-metrics
-           go-github-com-docker-go-units
-           go-github-com-emicklei-go-restful-v3
-           go-github-com-fsnotify-fsnotify
-           go-github-com-google-certtostore
-           go-github-com-google-go-cmp
-           go-github-com-google-uuid
-           go-github-com-grpc-ecosystem-go-grpc-middleware-providers-prometheus
-           go-github-com-intel-goresctrl
-           go-github-com-klauspost-compress
-           go-github-com-mdlayher-vsock
-           ;;go-github-com-microsoft-go-winio ;Windows only
-           ;;go-github-com-microsoft-hcsshim ;Windows only
-           go-github-com-moby-locker
-           go-github-com-moby-sys-mountinfo
-           go-github-com-moby-sys-sequential
-           go-github-com-moby-sys-signal
-           go-github-com-moby-sys-symlink
-           go-github-com-moby-sys-user
-           go-github-com-moby-sys-userns
-           go-github-com-opencontainers-go-digest
-           go-github-com-opencontainers-image-spec
-           go-github-com-opencontainers-runtime-spec
-           go-github-com-opencontainers-runtime-tools
-           go-github-com-opencontainers-selinux
-           go-github-com-pelletier-go-toml-v2
-           go-github-com-prometheus-client-golang
-           go-github-com-sirupsen-logrus
-           go-github-com-tchap-go-patricia-v2
-           go-github-com-urfave-cli-v2
-           go-github-com-vishvananda-netlink
-           go-github-com-vishvananda-netns
-           go-go-etcd-io-bbolt
-           go-go-opentelemetry-io-contrib-instrumentation-google-golang-org-grpc-otelgrpc
-           go-go-opentelemetry-io-contrib-instrumentation-net-http-otelhttp
-           go-go-opentelemetry-io-otel
-           go-go-opentelemetry-io-otel-exporters-otlp-otlptrace
-           go-go-opentelemetry-io-otel-exporters-otlp-otlptrace-otlptracegrpc
-           go-go-opentelemetry-io-otel-exporters-otlp-otlptrace-otlptracehttp
-           go-go-opentelemetry-io-otel-sdk
-           go-go-opentelemetry-io-otel-trace
-           go-go-uber-org-goleak
-           go-golang-org-x-mod
-           go-golang-org-x-sync
-           go-golang-org-x-sys
-           go-golang-org-x-time
-           go-google-golang-org-genproto-googleapis-rpc
-           go-google-golang-org-grpc
-           go-google-golang-org-protobuf
-           go-gopkg-in-inf-v0
-           go-k8s-io-apimachinery
-           go-k8s-io-client-go
-           go-k8s-io-cri-api
-           go-k8s-io-klog-v2
-           go-tags-cncf-io-container-device-interface))
-    (home-page "https://containerd.io/")
-    (synopsis "Container runtime support daemon")
-    (description
-     "Containerd is a container runtime with an emphasis on simplicity,
-robustness, and portability.  It is available as a daemon, which can manage
-the complete container lifecycle of its host system: image transfer and
-storage, container execution and supervision, low-level storage and network
-attachments, etc.")
-    (license license:asl2.0)))
-
-(define-public go-github-com-containers-gvisor-tap-vsock
-  (package
-    (name "go-github-com-containers-gvisor-tap-vsock")
-    (version "0.8.8")
-    (source
-     (origin
-       (method git-fetch)
-       (uri (git-reference
-              (url "https://github.com/containers/gvisor-tap-vsock")
-              (commit (string-append "v" version))))
-       (file-name (git-file-name name version))
-       (sha256
-        (base32 "1xz710dmy58gngd0qizjw8g9nkraksqald8vzhwc5h36dqkc8nrf"))
-       (modules '((guix build utils)))
-       (snippet
-        #~(begin
-            (delete-file-recursively "vendor")
-            ;; Submodules with their own go.mod files and packaged separately:
-            ;;
-            ;; - github.com/containers/gvisor-tap-vsock/tools
-            (delete-file-recursively "tools")))))
-    (build-system go-build-system)
-    (arguments
-     (list
-      #:skip-build? #t
-      #:import-path "github.com/containers/gvisor-tap-vsock"
-      #:unpack-path "github.com/containers/gvisor-tap-vsock"
-      #:build-flags
-      #~(list (string-append "-ldflags="
-                             "-X github.com/containers/gvisor-tap-vsock"
-                             "/pkg/types.gitVersion=" #$version))
-      #:test-flags
-      #~(list "-skip"
-              (string-join
-               ;; Received unexpected error:
-               ;; listen unix /tmp/guix-.../test.sock: bind: invalid argument
-               (list "TestNotificationSender_Success"
-                     ;; Requires network
-                     "TestSuite"
-                     "TestDNS")
-               "|"))
-      #:phases
-      #~(modify-phases %standard-phases
-          (add-after 'unpack 'prune-tests
-            (lambda* (#:key unpack-path #:allow-other-keys)
-              (with-directory-excursion (string-append "src/" unpack-path)
-                ;; Requires working DNS.
-                (substitute* "pkg/services/dns/dns_test.go"
-                  (("Should pass DNS requests to default system DNS.*" all)
-                   (string-append all "\n" "ginkgo.Skip(\"No network.\");"))
-                  (("\"redhat.com\",")
-                   "\"localhost\",")
-                  (("\"52.200.142.250\"")
-                   "\"127.0.0.1\""))))))))
-    (native-inputs
-     (list go-github-com-stretchr-testify
-           go-github-com-foxcpp-go-mockdns))
-    (propagated-inputs
-     (list go-github-com-apparentlymart-go-cidr
-           go-github-com-containers-winquit
-           go-github-com-coreos-stream-metadata-go
-           go-github-com-dustin-go-humanize
-           go-github-com-google-gopacket
-           go-github-com-inetaf-tcpproxy
-           go-github-com-insomniacslk-dhcp
-           ;; go-github-com-linuxkit-virtsock  ;Windows only
-           go-github-com-mdlayher-vsock
-           ;; go-github-com-microsoft-go-winio ;Windows only
-           go-github-com-miekg-dns
-           go-github-com-onsi-ginkgo
-           go-github-com-onsi-gomega
-           go-github-com-opencontainers-go-digest
-           go-github-com-sirupsen-logrus
-           go-github-com-songgao-packets
-           go-github-com-songgao-water
-           go-github-com-vishvananda-netlink
-           go-golang-org-x-crypto
-           go-golang-org-x-mod
-           go-golang-org-x-sync
-           go-golang-org-x-sys
-           go-gopkg-in-yaml-v3
-           go-gvisor-dev-gvisor))
-    (home-page "https://github.com/containers/gvisor-tap-vsock")
-    (synopsis "Network stack for virtualization based on gVisor")
-    (description "This package provides a replacement for @code{libslirp} and
-@code{VPNKit}, written in pure Go.  It is based on the network stack of gVisor
-and brings a configurable DNS server and dynamic port forwarding.
-
-It can be used with QEMU, Hyperkit, Hyper-V and User-Mode Linux.
-
-The binary is called @command{gvproxy}.")
-    (license license:asl2.0)))
-
-(define-public go-github-com-rootless-containers-rootlesskit-v3
-  (package
-    (name "go-github-com-rootless-containers-rootlesskit-v3")
-    (version "3.0.0")
-    (source
-     (origin
-       (method git-fetch)
-       (uri (git-reference
-              (url "https://github.com/rootless-containers/rootlesskit")
-              (commit (string-append "v" version))))
-       (file-name (git-file-name name version))
-       (sha256
-        (base32 "0giw1whjpm64h8f1iamgym246rr3wl01w7zgw4lygrj7dqk3clmb"))))
-    (build-system go-build-system)
-    (arguments
-     (list
-      #:skip-build? #t
-      #:import-path "github.com/rootless-containers/rootlesskit/v3"))
-    (propagated-inputs
-     (list go-github-com-containernetworking-plugins
-           go-github-com-containers-gvisor-tap-vsock
-           go-github-com-gofrs-flock
-           go-github-com-google-uuid
-           go-github-com-gorilla-mux
-           go-github-com-insomniacslk-dhcp
-           go-github-com-masterminds-semver-v3
-           go-github-com-moby-sys-mountinfo
-           go-github-com-moby-vpnkit
-           go-github-com-sirupsen-logrus
-           go-github-com-songgao-water
-           go-github-com-urfave-cli-v2
-           go-golang-org-x-sync
-           go-golang-org-x-sys
-           go-gotest-tools-v3))
-    (home-page "https://github.com/rootless-containers/rootlesskit")
-    (synopsis "Linux-native fakeroot using user namespaces in Golang")
-    (description
-     "@code{RootlessKit} is a Linux-native implementation of \"fake root\" using
-@url{http://man7.org/linux/man-pages/man7/user_namespaces.7.html,(code
-user_namespaces(7))}.  It is used to run containers engines as an
-unprivileged user, known as \"Rootless mode\".")
-    (license license:asl2.0)))
-
-
 
 ;;;
 ;;; Executables:
@@ -511,7 +150,7 @@ as created by Podman, CRI-O and containerd.")))
 (define-public crun
   (package
     (name "crun")
-    (version "1.27.1")
+    (version "1.25.1")
     (source
      (origin
        (method url-fetch)
@@ -521,7 +160,7 @@ as created by Podman, CRI-O and containerd.")))
              "/crun-" version ".tar.gz"))
        (sha256
         (base32
-         "1w782s95f3xvw3fb66l2ciqkqsg4bk7n9ph31jmvn669ap272ymy"))))
+         "02kksvnja234k8mpq5j7yms8npbpvh8iz3k03h21lwcqzqsb88rx"))))
     (build-system gnu-build-system)
     (arguments
      (list
@@ -906,7 +545,7 @@ Layer-4 sockets.")
 (define-public cni-plugins
   (package
     (name "cni-plugins")
-    (version "1.9.1")
+    (version "1.9.0")
     (source
      (origin
        (method git-fetch)
@@ -915,7 +554,7 @@ Layer-4 sockets.")
               (commit (string-append "v" version))))
        (file-name (git-file-name name version))
        (sha256
-        (base32 "12z6w2jk6xgfiwdxys7skpkxldz1cgaa7scgfcr90lsghay59s6w"))
+        (base32 "0l3jgbizq0yaxld07hsdbh6ix2w6i789101ddk0ldnsmr93jg6ni"))
        (snippet
         #~(begin (use-modules (guix build utils))
                  (delete-file-recursively "vendor")))))
@@ -956,33 +595,92 @@ configure network interfaces in Linux containers.")
     (license license:asl2.0)))
 
 (define-public gvisor-tap-vsock
-  (package/inherit go-github-com-containers-gvisor-tap-vsock
+  (package
     (name "gvisor-tap-vsock")
+    (version "0.8.8")
+    (source
+     (origin
+       (method git-fetch)
+       (uri (git-reference
+              (url "https://github.com/containers/gvisor-tap-vsock")
+              (commit (string-append "v" version))))
+       (file-name (git-file-name name version))
+       (sha256
+        (base32 "1xz710dmy58gngd0qizjw8g9nkraksqald8vzhwc5h36dqkc8nrf"))
+       (modules '((guix build utils)))
+       (snippet
+        #~(begin
+            (delete-file-recursively "vendor")
+            ;; Submodules with their own go.mod files and packaged separately:
+            ;;
+            ;; - github.com/containers/gvisor-tap-vsock/tools
+            (delete-file-recursively "tools")))))
+    (build-system go-build-system)
     (arguments
-     (substitute-keyword-arguments arguments
+     (list
-       ((#:install-source? _ #t) #f)
+      #:install-source? #f
-       ((#:skip-build? _ #t) #f)
+      #:import-path "github.com/containers/gvisor-tap-vsock/cmd/gvproxy"
-       ((#:tests? _ #t) #f)
+      #:unpack-path "github.com/containers/gvisor-tap-vsock"
-       ((#:phases _ '%standard-phases)
+      #:build-flags
-        #~(modify-phases %standard-phases
+      #~(list (string-append "-ldflags="
-            ;; Build binary outputs are taken from project's Makefile.
+                             "-X github.com/containers/gvisor-tap-vsock"
-            (replace 'build
+                             "/pkg/types.gitVersion=" #$version))
-              (lambda arguments
+      #:test-flags
-                (for-each
+      ;; serve UDP error: *net.OpError read udp 127.0.0.1:5354: use of closed
-                 (lambda (cmd)
+      ;; network connection
-                   (apply (assoc-ref %standard-phases 'build)
+      #~(list "-skip" "TestSuite")
-                          `(,@arguments #:import-path ,cmd)))
+      #:test-subdirs
-                 (list "github.com/containers/gvisor-tap-vsock/cmd/gvproxy"
+      #~(list "../../...")       ;test the whole library
-                       "github.com/containers/gvisor-tap-vsock/cmd/qemu-wrapper"
+      #:phases
-                       "github.com/containers/gvisor-tap-vsock/cmd/vm"))))
+      #~(modify-phases %standard-phases
-            (add-after 'install 'fix-bin-name
+          (add-after 'unpack 'prune-tests
-              (lambda _
+            (lambda* (#:key unpack-path #:allow-other-keys)
-                (rename-file (string-append #$output "/bin/vm")
+              (with-directory-excursion (string-append "src/" unpack-path)
-                             (string-append #$output "/bin/gvforwarder"))))))))
+                ;; Requires working DNS.
+                (substitute* "pkg/services/dns/dns_test.go"
+                  (("Should pass DNS requests to default system DNS.*" all)
+                   (string-append all "\n" "ginkgo.Skip(\"No network.\");"))
+                  (("\"redhat.com\",")
+                   "\"localhost\",")
+                  (("\"52.200.142.250\"")
+                   "\"127.0.0.1\""))))))))
     (native-inputs
-     (package-propagated-inputs go-github-com-containers-gvisor-tap-vsock))
+     (list go-github-com-apparentlymart-go-cidr
-    (propagated-inputs '())
+           go-github-com-containers-winquit
-    (inputs '())))
+           go-github-com-coreos-stream-metadata-go
+           go-github-com-dustin-go-humanize
+           go-github-com-foxcpp-go-mockdns
+           go-github-com-google-gopacket
+           go-github-com-inetaf-tcpproxy
+           go-github-com-insomniacslk-dhcp
+           ;; go-github-com-linuxkit-virtsock  ;Windows only
+           go-github-com-mdlayher-vsock
+           ;; go-github-com-microsoft-go-winio ;Windows only
+           go-github-com-miekg-dns
+           go-github-com-onsi-ginkgo
+           go-github-com-onsi-gomega
+           go-github-com-opencontainers-go-digest
+           go-github-com-sirupsen-logrus
+           go-github-com-songgao-packets
+           go-github-com-songgao-water
+           go-github-com-stretchr-testify
+           go-github-com-vishvananda-netlink
+           go-golang-org-x-crypto
+           go-golang-org-x-mod
+           go-golang-org-x-sync
+           go-golang-org-x-sys
+           go-gopkg-in-yaml-v3
+           go-gvisor-dev-gvisor))
+    (home-page "https://github.com/containers/gvisor-tap-vsock")
+    (synopsis "Network stack for virtualization based on gVisor")
+    (description "This package provides a replacement for @code{libslirp} and
+@code{VPNKit}, written in pure Go.  It is based on the network stack of gVisor
+and brings a configurable DNS server and dynamic port forwarding.
+
+It can be used with QEMU, Hyperkit, Hyper-V and User-Mode Linux.
+
+The binary is called @command{gvproxy}.")
+    (license license:asl2.0)))
 
 (define-public catatonit
   (package
@@ -1187,7 +885,7 @@ being rootless and not requiring any daemon to be running.")
 (define-public buildah
   (package
     (name "buildah")
-    (version "1.43.1")
+    (version "1.43.0")
     (source
      (origin
        (method git-fetch)
@@ -1195,7 +893,7 @@ being rootless and not requiring any daemon to be running.")
              (url "https://github.com/containers/buildah")
              (commit (string-append "v" version))))
        (sha256
-        (base32 "00x4ja5n49jmkmiv54mmkihks9pnjnna7s7py57in6pc9g85xj2y"))
+        (base32 "0pwdd0mxhxy530c2sbsz0rnnb1jyl41rvnqn9ywfgb6lz5f4ja2a"))
        (file-name (git-file-name name version))))
     (build-system gnu-build-system)
     (arguments

gnu/packages/coq.scm

@@ -35,7 +35,7 @@
   #:use-module (gnu packages boost)
   #:use-module (gnu packages compression)
   #:use-module (gnu packages emacs)
-  #:use-module (gnu packages compiler-tools)
+  #:use-module (gnu packages flex)
   #:use-module (gnu packages gawk)
   #:use-module (gnu packages multiprecision)
   #:use-module (gnu packages ocaml)

gnu/packages/coreboot.scm

@@ -23,7 +23,7 @@
 (define-module (gnu packages coreboot)
   #:use-module (gnu packages bison)
   #:use-module (gnu packages compression)
-  #:use-module (gnu packages compiler-tools)
+  #:use-module (gnu packages flex)
   #:use-module (gnu packages pciutils)
   #:use-module ((guix licenses) #:prefix license:)
   #:use-module (guix build-system cargo)
@@ -127,76 +127,6 @@ formats:
 It also comes with example files generated by bincfg.")
     (license license:gpl3+)))
 
-(define-public bucts
-  (package
-    (name "bucts")
-    (version %coreboot-version)
-    (source %coreboot-origin)
-    (build-system gnu-build-system)
-    (arguments
-     (list
-      #:tests? #f ;no tests
-      #:make-flags #~(list (string-append "CC=" #$(cc-for-target)))
-      #:phases #~(modify-phases %standard-phases
-                   (delete 'configure) ;no configure script
-                   (add-after 'unpack 'enter-source
-                     (lambda _
-                       (chdir "util/bucts")))
-                   (add-after 'enter-source 'set-version
-                     (lambda _
-                       (substitute* "Makefile"
-                         (("^VERSION:=*")
-                          #$(string-append "VERSION:=" version)))))
-                   ;; no install target
-                   (replace 'install
-                     (lambda _
-                       (let ((bin (string-append #$output "/bin"))
-                             (doc (string-append #$output "/share/doc/bucts/"))
-                             (licenses (string-append #$output
-                                        "/share/licenses/bucts/")))
-                         (install-file "bucts" bin)
-                         (install-file "readme.md" doc)
-                         (install-file "../../COPYING" licenses)))))))
-    (inputs (list pciutils))
-    (home-page "https://coreboot.org")
-    (synopsis "Tool to swap the BIOS bootblock and backup bootblock on the
-Intel I945 chipsets")
-    (description
-     "The @command{bucts} command can flip a bit in the BUC.TS register of the
-Intel I945 chipsets and show the register status.  When the bit is set, it
-swaps the bootblock location.  Because the bootblock region is often set
-read-only by the default BIOS, this enables to bypass that restriction and is
-used as part of a procedure to replace the nonfree BIOS with free software on
-various computers (Lenovo X60, X60s, X60T, T60, probably more).")
-    (license license:gpl2)))
-
-(define-public ectool
-  (package
-    (name "ectool")
-    (version %coreboot-version)
-    (source %coreboot-origin)
-    (build-system gnu-build-system)
-    (arguments
-     (list
-      #:tests? #f ; no test suite
-      #:make-flags
-      #~(list (string-append "CC=" #$(cc-for-target))
-              "INSTALL=install"
-              (string-append "PREFIX=" #$output))
-      #:phases
-      #~(modify-phases %standard-phases
-          (add-after 'unpack 'chdir
-            (lambda _
-              (chdir "util/ectool")))
-          (delete 'configure)))) ; no configure script
-    (home-page "https://doc.coreboot.org/util.html")
-    (synopsis "Tool to dump and modify @acronym{EC, Embedded Controller} RAM
-on computers such as laptops")
-    (description "This package provides @command{ectool}, a program to dump
-and modify the contents of @acronym{EC, Embedded Controller} RAM
-on mobile computers.")
-    (license license:gpl2)))
-
 (define-public ifdtool
   (package
     (name "ifdtool")

gnu/packages/cpp.scm

@@ -28,7 +28,7 @@
 ;;; Copyright © 2022-2024 Efraim Flashner <efraim@flashner.co.il>
 ;;; Copyright © 2022 muradm <mail@muradm.net>
 ;;; Copyright © 2022 Attila Lendvai <attila@lendvai.name>
-;;; Copyright © 2022, 2026 Arun Isaac <arunisaac@systemreboot.net>
+;;; Copyright © 2022 Arun Isaac <arunisaac@systemreboot.net>
 ;;; Copyright © 2022-2025 David Elsing <david.elsing@posteo.net>
 ;;; Copyright © 2022-2024 Zheng Junjie <873216071@qq.com>
 ;;; Copyright © 2022-2024, 2026 Maxim Cournoyer <maxim@guixotic.coop>
@@ -44,7 +44,7 @@
 ;;; Copyright © 2024 Jakob Kirsch <jakob.kirsch@web.de>
 ;;; Copyright © 2025 Sharlatan Hellseher <sharlatanus@gmail.com>
 ;;; Copyright © 2025 Sergio Pastor Pérez <sergio.pastorperez@gmail.com>
-;;; Copyright © 2025, 2026 Ashish SHUKLA <ashish.is@lostca.se>
+;;; Copyright © 2025 Ashish SHUKLA <ashish.is@lostca.se>
 ;;; Copyright © 2025 Nicolas Graves <ngraves@ngraves.fr>
 ;;; Copyright © 2025 Romain Garbage <romain.garbage@inria.fr>
 ;;; Copyright © 2024, 2025 Janneke Nieuwenhuizen <janneke@gnu.org>
@@ -52,8 +52,6 @@
 ;;; Copyright © 2025 Philippe Swartvagher <phil.swart@gmx.fr>
 ;;; Copyright © 2025 Murilo <murilo@disroot.org>
 ;;; Copyright © 2026 Justin Veilleux <terramorpha@cock.li>
-;;; Copyright © 2026 Daniel Littlewood <dan@danielittlewood.xyz>
-;;; Copyright © 2026 bdunahu <bdunahu@operationnull.com>
 ;;;
 ;;; This file is part of GNU Guix.
 ;;;
@@ -80,6 +78,7 @@
   #:use-module (guix build-system copy)
   #:use-module (guix build-system gnu)
   #:use-module (guix build-system meson)
+  #:use-module (guix build-system python)
   #:use-module (guix build-system pyproject)
   #:use-module (guix build-system scons)
   #:use-module (guix modules)
@@ -134,7 +133,6 @@
   #:use-module (gnu packages sdl)
   #:use-module (gnu packages tls)
   #:use-module (gnu packages tex)
-  #:use-module (gnu packages texinfo)
   #:use-module (gnu packages web)
   #:use-module (gnu packages webkit)
   #:use-module (gnu packages xdisorg)
@@ -937,85 +935,6 @@ inspired by the @url{https://github.com/gruns/icecream, Python library} of the
 same name.")
     (license license:expat)))
 
-(define-public tinyformat
-  (package
-    (name "tinyformat")
-    (version "2.3.0")
-    (source (origin
-              (method git-fetch)
-              (uri (git-reference
-                     (url "https://github.com/c42f/tinyformat")
-                     (commit (string-append "v" version))))
-              (file-name (git-file-name name version))
-              (sha256
-               (base32
-                "0j8bxrg7i4rn98iqpfh03krshgcbwh8hq8nm0p3sfdqpira3vi3y"))))
-    (build-system cmake-build-system)
-    (arguments
-     (list #:phases
-           #~(modify-phases %standard-phases
-               (replace 'install
-                 (lambda _
-                   (install-file "../source/tinyformat.h"
-                                 (string-append #$output "/include")))))))
-    (home-page "https://github.com/c42f/tinyformat")
-    (synopsis "Minimal, type-safe printf replacement library for C++")
-    (description "@code{tinyformat} is a type-safe @code{printf} replacement
-library in a single C++ header file.  Design goals include:
-
-@itemize
-@item Type-safety and extensibility for user defined types
-@item C99 @code{printf} compatibility, to the extent possible using
-@code{std::ostream}
-@item POSIX extension for positional arguments
-@item Simplicity and minimalism; a single header file to include and
-distribute with your projects
-@item Augment rather than replace the standard stream formatting mechanism
-@item C++98 support, with optional C++11 niceties
-@end itemize")
-    (license license:boost1.0)))
-
-(define-public span
-  (let ((commit "836dc6a0efd9849cb194e88e4aa2387436bb079b")
-        (revision "0"))
-    (package
-      (name "span")
-      (version (git-version "0.1.0" revision commit))
-      (source (origin
-                (method git-fetch)
-                (uri (git-reference
-                       (url "https://github.com/tcbrindle/span")
-                       (commit commit)))
-                (file-name (git-file-name name version))
-                (sha256
-                 (base32
-                  "1v3x1mj4if8jrr7cmrcbhv8n8ygla0liqb0dic6g6ji7px2pr6jf"))
-                (snippet
-                 #~(delete-file "test/catch.hpp"))))
-      (build-system cmake-build-system)
-      (arguments
-       (list #:phases
-             #~(modify-phases %standard-phases
-                 (add-after 'unpack 'patch-catch2
-                   (lambda _
-                     ;; Use catch2 from Guix.
-                     (substitute* (find-files "test" "\\.cpp$")
-                       (("#include \"catch.hpp\"")
-                        "#include <catch2/catch.hpp>"))))
-                 (replace 'install
-                   (lambda _
-                     (install-file "../source/include/tcb/span.hpp"
-                                   (string-append #$output "/include")))))))
-      (native-inputs
-       (list catch2))
-      (home-page "https://github.com/tcbrindle/span")
-      (synopsis "C++20's @code{std::span} shim for older compilers")
-      (description "This package provides a single-header implementation of
-C++20's @code{std::span}, conforming to the C++20 committee draft.  It is
-compatible with C++11, but will use newer language features if they are
-available.")
-      (license license:boost1.0))))
-
 (define-public google-highway
   (package
     (name "google-highway")
@@ -1434,9 +1353,6 @@ data transfer object.")
 (define-public nlohmann-json
   (package
     (name "nlohmann-json")
-    ;; XXX: Merge related package `nlohmann-json-no-char8-t' back into here when
-    ;; updating from 3.12.0, as the unique patch it applies will already be
-    ;; incorporated in.
     (version "3.12.0")
     (home-page "https://github.com/nlohmann/json")
     (source
@@ -1510,46 +1426,6 @@ intuitive syntax and trivial integration.")
 (define-deprecated-package json-modern-cxx
   nlohmann-json)
 
-(define-public nlohmann-json-no-char8-t
-  (package
-    ;; XXX: Version 3.12.0 does not work without char8_t support.
-    ;; OpenRCT2 compiles with -fno-char8_t, and thus requires this patch.
-    ;; See https://github.com/nlohmann/json/pull/4736
-    (inherit nlohmann-json)
-    (name "nlohmann-json-no-char8-t")
-    (version "3.12.0")
-    (source
-     (origin
-       (method git-fetch)
-       (uri (git-reference (url "https://github.com/nlohmann/json")
-                           (commit (string-append "v" version))))
-       (sha256
-        (base32 "09nqq56ighr3lghhn3fs399lkllghz717j0xyp87x0giw86ayh3h"))
-       (file-name (git-file-name name version))
-       (modules '((guix build utils)))
-       (snippet
-        #~(begin
-            ;; Delete bundled software.  Preserve doctest_compatibility.h, which
-            ;; is a wrapper library added by this package.
-            (install-file "./tests/thirdparty/doctest/doctest_compatibility.h"
-                          "/tmp")
-            (delete-file-recursively "./tests/thirdparty")
-            (install-file "/tmp/doctest_compatibility.h"
-                          "./tests/thirdparty/doctest")
-
-            ;; Adjust for the unbundled fifo_map and doctest.
-            (substitute* (find-files "./tests/" "\\.h(pp)?")
-              (("#include \"doctest\\.h\"") "#include <doctest/doctest.h>")
-              (("#include <doctest\\.h>") "#include <doctest/doctest.h>"))
-            (with-directory-excursion "tests/src"
-              (let ((files (find-files "." "\\.cpp$")))
-                (substitute* files
-                  (("#include ?\"(fifo_map.hpp)\"" all fifo-map-hpp)
-                   (string-append
-                    "#include <fifo_map/" fifo-map-hpp ">")))))))
-       (patches
-        (search-patches "nlohmann_json_fix_char8_t.patch"))))))
-
 (define-public jthread
   (let ((commit "0fa8d394254886c555d6faccd0a3de819b7d47f8")
         (revision "0"))
@@ -1795,38 +1671,6 @@ maintained anymore.")
 concurrent queue for C++11.")
     (license license:bsd-2)))
 
-(define-public ringbuffer
-  (package
-    (name "ringbuffer")
-    (version "0.9.0")
-    (source (origin
-              (method git-fetch)
-              (uri (git-reference
-                    (url "https://github.com/JohannesLorenz/ringbuffer")
-                    (commit (string-append "v" version))))
-              (file-name (git-file-name name version))
-              (sha256
-               (base32
-                "1c57hj6zyvcjpcbwrq8c1hj5brk1bnh69ayd88ny1p0gx031sjpk"))))
-    (build-system cmake-build-system)
-    (arguments
-     (list #:configure-flags
-           #~(list "-DCMAKE_CXX_FLAGS=-Wno-error=array-bounds"
-                   (string-append "-DINSTALL_LIB_DIR=" #$output "/lib"))
-           #:phases
-           #~(modify-phases %standard-phases
-               (add-after 'install 'install-export-header
-                 (lambda _
-                   (install-file "src/lib/ringbuffer_export.h"
-                                 (string-append #$output
-                                                "/include/ringbuffer")))))))
-    (home-page "https://github.com/JohannesLorenz/ringbuffer")
-    (synopsis "Lock-free multi-reader ringbuffer")
-    (description
-     "@code{ringbuffer} is a library containing a ringbuffer.  It is lock-free
-(using atomics only), and allows multiple readers, but only one writer.")
-    (license license:gpl3+)))
-
 (define-public spscqueue
   (package
     (name "spscqueue")
@@ -2060,7 +1904,8 @@ using the string similarity calculations from FuzzyWuzzy.")
           (add-after 'unpack 'fix-pytest-config
             (lambda _
               (substitute* "pyproject.toml"
-                (("\"pytest-cov\", ") "")))))))
+                ((" \"pytest-cov\", ") "")
+                ((" --cov-fail-under=90 --cov=cpplint") "")))))))
     (native-inputs
      (list python-pytest
            python-pytest-timeout
@@ -3347,7 +3192,8 @@ pointers, containers, compiler building blocks, etc.")
     (native-inputs
      (list build))
     (inputs
-     (list libcutl xerces-c))
+     `(("libcutl" ,libcutl)
+       ("libxerces-c" ,xerces-c)))
     (synopsis "XSD Front-end")
     (description "@code{libxsd-frontend} is a compiler frontend for the W3C
 XML Schema definition language.  It includes a parser, semantic graph types
@@ -3514,7 +3360,7 @@ which can evaluate Jsonnet files and expressions.")))
 (define-public simdjson
   (package
     (name "simdjson")
-    (version "4.6.3")
+    (version "3.13.0")
     (source (origin
               (method git-fetch)
               (uri (git-reference
@@ -3523,7 +3369,7 @@ which can evaluate Jsonnet files and expressions.")))
               (file-name (git-file-name name version))
               (sha256
                (base32
-                "0729mxnc2wjb94gr4znwlzfmgw5w2v9kd8glvn3vnjhkdnd87zry"))))
+                "005yli56nrkvlyx9g9cq8dczk42r9a18l162i2s5k81lj3y7mcrp"))))
     (build-system cmake-build-system)
     (arguments
      '(#:tests? #f                      ; tests require downloading dependencies
@@ -3762,7 +3608,7 @@ std::wstring, etc).")
 (define-public fast-float
   (package
     (name "fast-float")
-    (version "8.2.5")
+    (version "8.0.2")
     (source (origin
               (method git-fetch)
               (uri (git-reference
@@ -3771,7 +3617,7 @@ std::wstring, etc).")
               (file-name (git-file-name name version))
               (sha256
                (base32
-                "1l13nsl4sgq71m7aifrmmmfyl14vp48vqdh7pb50hxqq6f8bq2b5"))))
+                "19x1yklf641yrpad6lk4cq3jmird10d5ig8hicm3p9lxh92k78cl"))))
     (build-system cmake-build-system)
     (arguments
      (list
@@ -3782,10 +3628,12 @@ std::wstring, etc).")
           (add-after 'unpack 'patch-cmake-tests
             (lambda* (#:key inputs native-inputs #:allow-other-keys)
               (substitute* "tests/CMakeLists.txt"
-                (("FetchContent_MakeAvailable\\(supplemental_test_files.*")
+                (("FetchContent_GetProperties\\(supplemental_test_files.*")
+                 "")
+                (("if\\(NOT supplemental_test_files_POPULATED.*")
                  (string-append
                   "set(supplemental_test_files_BINARY_DIR "
-                  #$fast-float-test-files ")\n"))))))))
+                  #$fast-float-test-files ")\nif(0)\n"))))))))
     (native-inputs (list doctest fast-float-test-files))
     (home-page "https://github.com/fastfloat/fast_float")
     (synopsis "Floating point number parser for C++")
@@ -3822,39 +3670,6 @@ computing Fast Fourier transformations.  It supports multidimensional arrays,
 different floating point sizes and complex transformations.")
       (license license:bsd-3))))
 
-(define-public libbinio
-  ;; The latest tagged version does not support CMake build.  This commit has
-  ;; builds with CMake and has updated CMake version support.
-  (let ((commit "e88dad086265e179ab6aef7f479e19f3917c7a98")
-        (revision "0"))
-    (package
-      (name "libbinio")
-      (version (git-version "1.5" revision commit))
-      (source (origin
-                (method git-fetch)
-                (uri (git-reference
-                      (url "https://github.com/adplug/libbinio")
-                      (commit commit)))
-                (file-name (git-file-name name version))
-                (sha256
-                 (base32
-                  "0rb33jl6gpxb88zymzl996m43b7r6wyw4lq0ib3626kna3baqnha"))))
-      (native-inputs
-       (list autoconf automake libtool texinfo))
-      (build-system cmake-build-system)
-      (arguments
-       (list #:tests? #f ;no tests
-             #:configure-flags
-             #~(list "-DBUILD_SHARED_LIBS=ON")))
-      (home-page "http://adplug.github.io/libbinio/")
-      (synopsis "Binary I/O stream class library")
-      (description
-       "This binary I/O stream class library presents a platform-independent
-way to access binary data streams in C++.  The library is hardware independent
-in the form that it transparently converts between the different forms of
-machine-internal binary data representation.")
-      (license license:lgpl2.1+))))
-
 (define-public priocpp
   ;; Latest release is from 2022-08-14.
   (let ((commit "ea15402adcd0d9191dc29ca6f7e4dd0bff67b9b5")
@@ -4524,29 +4339,6 @@ file name and location, as well as filters with friendly names (such as
        "This package provides a simple S-Expression parser for C++.")
       (license license:gpl3+))))
 
-(define-public sfl-library
-  (package
-    (name "sfl-library")
-    (version "2.2.0")
-    (source
-     (origin
-       (method git-fetch)
-       (uri (git-reference
-              (url "https://github.com/slavenf/sfl-library")
-              (commit version)))
-       (file-name (git-file-name name version))
-       (sha256
-        (base32 "1ngy86b9y1b8a4j37c14m1jrg0q5b12jj8b0gdnpl5sjb1r2fljk"))))
-    (build-system cmake-build-system)
-    (arguments (list #:tests? #f))              ;no tests
-    (home-page "https://github.com/slavenf/sfl-library")
-    (synopsis "Header-only C++11/20 container library")
-    (description "sfl-library provides many STL-like (Standard Template Library)
-containers including vectors, associative containers, and unordered containers
-based on hash tables.  These containers are designed for C++11 and C++20
-constant expression usage.")
-    (license license:zlib)))
-
 (define-public string-view-lite
   (package
     (name "string-view-lite")
@@ -4704,47 +4496,6 @@ meta data function.")
     ;; or the CECILL-C license:
     (license (list license:lgpl3 license:cecill-c))))
 
-(define-public tcbrindle-span
-  (let ((commit "836dc6a0efd9849cb194e88e4aa2387436bb079b")
-        (revision "0"))
-    (package
-      (name "tcbrindle-span")
-      (version (git-version "0" revision commit))
-      (source
-       (origin
-         (method git-fetch)
-         (uri (git-reference
-               (url "https://github.com/tcbrindle/span")
-               (commit commit)))
-         (file-name (git-file-name name version))
-         (sha256
-          (base32 "1v3x1mj4if8jrr7cmrcbhv8n8ygla0liqb0dic6g6ji7px2pr6jf"))
-         (modules '((guix build utils)))
-         ;; Unbundle catch.
-         (snippet
-          '(with-directory-excursion "test"
-             (delete-file "catch.hpp")
-             (substitute* (find-files "." "\\.cpp$")
-               (("\"catch\\.hpp\"") "<catch.hpp>"))))))
-      (build-system cmake-build-system)
-      (native-inputs (list catch-framework))
-      (arguments
-       (list
-        #:phases
-        #~(modify-phases %standard-phases
-            (replace 'install
-              (lambda _
-                (mkdir-p (string-append #$output))
-                (copy-recursively "../source/include"
-                                  (string-append #$output "/include")))))))
-      (home-page "https://github.com/tcbrindle/span")
-      (synopsis "Implementation of C++20's @code{std::span} for older compilers")
-      (description
-       "This package provides a single-header implementation of C++20's
-@code{std::span}, conforming to the C++20 committee draft.  It is compatible
-with C++11, but will use newer language features if they are available.")
-    (license license:boost1.0))))
-
 (define-public tsl-hopscotch-map
   (package
     (name "tsl-hopscotch-map")

gnu/packages/crypto.scm

@@ -105,6 +105,7 @@
   #:use-module (guix build-system copy)
   #:use-module (guix build-system gnu)
   #:use-module (guix build-system perl)
+  #:use-module (guix build-system python)
   #:use-module (guix build-system pyproject)
   #:use-module (guix utils)
   #:use-module (srfi srfi-1)
@@ -275,17 +276,18 @@ Ed448-Goldilocks and Curve448, using the Decaf encoding.")
 (define-public libsodium
   (package
     (name "libsodium")
-    (version "1.0.22")
+    (version "1.0.18")
-    (source
+    (source (origin
-     (origin
+            (method url-fetch)
-       (method git-fetch)
+            (uri (list (string-append
-       (uri (git-reference
+                        "https://download.libsodium.org/libsodium/"
-              (url "https://github.com/jedisct1/libsodium")
+                        "releases/libsodium-" version ".tar.gz")
-              (commit (string-append version "-RELEASE"))))
+                       (string-append
-       (file-name (git-file-name name version))
+                        "https://download.libsodium.org/libsodium/"
-       (sha256
+                        "releases/old/libsodium-" version ".tar.gz")))
-        (base32
+            (sha256
-         "05lqdn6nzldsia5mv5a9xfvc5k0kybh9snwv7qsb135gva4bpjwk"))))
+             (base32
+              "1h9ncvj23qbbni958knzsli8dvybcswcjbx0qjjgi922nf848l3g"))))
     (build-system gnu-build-system)
     (synopsis "Portable NaCl-based crypto library")
     (description

gnu/packages/cups.scm

@@ -62,6 +62,7 @@
   #:use-module (guix build-system cmake)
   #:use-module (guix build-system gnu)
   #:use-module (guix build-system meson)
+  #:use-module (guix build-system python)
   #:use-module (guix build-system pyproject)
   #:use-module (guix download)
   #:use-module (guix git-download)

gnu/packages/cybersecurity.scm

@@ -31,6 +31,7 @@
   #:use-module ((guix licenses) #:prefix license:)
   #:use-module (guix build-system cmake)
   #:use-module (guix build-system pyproject)
+  #:use-module (guix build-system python)
   #:use-module (gnu packages databases)
   #:use-module (gnu packages check)
   #:use-module (gnu packages cpp)
@@ -111,7 +112,7 @@ Refresh}in-DRAM mitigations effectively and as such can trigger bit flips.")
 (define-public gallia
   (package
     (name "gallia")
-    (version "2.1.1")
+    (version "2.0.2")
     (source
      (origin
        (method git-fetch)
@@ -120,7 +121,7 @@ Refresh}in-DRAM mitigations effectively and as such can trigger bit flips.")
               (commit (string-append "v" version))))
        (file-name (git-file-name name version))
        (sha256
-        (base32 "04xzh5fi18wrkjs7sqwlv344jf54njvnly042rhxq3x5jrvpvkdw"))))
+        (base32 "1yvjpwpqq6r6glfm4qzb8j91d2gsfy4lvygd9z9pg2j6jvcq6f6s"))))
     (build-system pyproject-build-system)
     (arguments
      (list
@@ -132,16 +133,25 @@ Refresh}in-DRAM mitigations effectively and as such can trigger bit flips.")
       #:test-flags #~(list "tests/pytest")))
     (native-inputs
      (list python-poetry-core
+           python-pygit2
            python-pytest
            python-pytest-asyncio))
     (inputs
-     (list python-aiosqlite
+     (list python-aiofiles
+           python-aiosqlite
            python-argcomplete
            python-boltons
+           python-can
+           python-construct
+           python-exitcode
+           python-httpx
+           python-more-itertools
+           python-msgspec
            python-platformdirs
+           python-psutil
            python-pydantic
+           python-pygit2
            python-tabulate
-           python-wcwidth
            python-zstandard))
     (home-page "https://github.com/Fraunhofer-AISEC/gallia")
     (synopsis "Extendable Pentesting Framework")

gnu/packages/databases.scm

@@ -32,7 +32,7 @@
 ;;; Copyright © 2017 Kristofer Buffington <kristoferbuffington@gmail.com>
 ;;; Copyright © 2018 Amirouche Boubekki <amirouche@hypermove.net>
 ;;; Copyright © 2018 Joshua Sierles, Nextjournal <joshua@nextjournal.com>
-;;; Copyright © 2018, 2021-2023, 2026 Maxim Cournoyer <maxim@guixotic.coop>
+;;; Copyright © 2018, 2021, 2022, 2023 Maxim Cournoyer <maxim@guixotic.coop>
 ;;; Copyright © 2019 Jack Hill <jackhill@jackhill.us>
 ;;; Copyright © 2019 Alex Griffin <a@ajgrf.com>
 ;;; Copyright © 2019 Gábor Boskovits <boskovits@gmail.com>
@@ -70,8 +70,6 @@
 ;;; Copyright © 2025 bdunahu <bdunahu@operationnull.com>
 ;;; Copyright © 2026 Spencer King <spencer.king@wustl.edu>
 ;;; Copyright © 2026 Peter Polidoro <peter@polidoro.io>
-;;; Copyright © 2026 Josep Bigorra <jjbigorra@gmail.com>
-;;; Copyright © 2026 Daniel Littlewood <dan@danielittlewood.xyz>
 ;;;
 ;;; This file is part of GNU Guix.
 ;;;
@@ -109,7 +107,7 @@
   #:use-module (gnu packages dbm)
   #:use-module (gnu packages docbook)
   #:use-module (gnu packages emacs)
-  #:use-module (gnu packages compiler-tools)
+  #:use-module (gnu packages flex)
   #:use-module (gnu packages freedesktop)
   #:use-module (gnu packages gawk)
   #:use-module (gnu packages gcc)
@@ -128,10 +126,8 @@
   #:use-module (gnu packages gperf)
   #:use-module (gnu packages gtk)
   #:use-module (gnu packages guile)
-  #:use-module (gnu packages guile-xyz)
   #:use-module (gnu packages icu4c)
   #:use-module (gnu packages jemalloc)
-  #:use-module (gnu packages kerberos)
   #:use-module (gnu packages language)
   #:use-module (gnu packages libedit)
   #:use-module (gnu packages libevent)
@@ -148,7 +144,6 @@
   #:use-module (gnu packages networking)
   #:use-module (gnu packages node)
   #:use-module (gnu packages onc-rpc)
-  #:use-module (gnu packages openldap)
   #:use-module (gnu packages openstack)
   #:use-module (gnu packages pantheon)
   #:use-module (gnu packages parallel)
@@ -177,7 +172,6 @@
   #:use-module (gnu packages ruby)
   #:use-module (gnu packages ruby-check)
   #:use-module (gnu packages ruby-xyz)
-  #:use-module (gnu packages security-token)
   #:use-module (gnu packages serialization)
   #:use-module (gnu packages sphinx)
   #:use-module (gnu packages ssh)
@@ -204,10 +198,10 @@
   #:use-module (guix build-system emacs)
   #:use-module (guix build-system gnu)
   #:use-module (guix build-system go)
-  #:use-module (guix build-system guile)
   #:use-module (guix build-system meson)
   #:use-module (guix build-system perl)
   #:use-module (guix build-system pyproject)
+  #:use-module (guix build-system python)
   #:use-module (guix build-system qt)
   #:use-module (guix build-system ruby)
   #:use-module (guix build-system cmake)
@@ -1063,31 +1057,6 @@ auto-completion and syntax highlighting.")
 \"special\", or \"backslash commands\") on PostgreSQL.")
     (license license:bsd-3)))
 
-(define-public python-sqlite-anyio
-  (package
-    (name "python-sqlite-anyio")
-    (version "0.2.8")
-    (source
-     (origin
-       (method git-fetch)
-       (uri (git-reference
-             (url "https://github.com/davidbrochart/sqlite-anyio")
-             (commit version)))
-       (file-name (git-file-name name version))
-       (sha256
-        (base32 "075fnrrwzn9xc2clkcsyfycjc870khcwnpdg4g726qwl44pfzy2a"))))
-    (build-system pyproject-build-system)
-    (arguments
-     (list
-      #:build-backend "poetry.core.masonry.api")) ;XXX: python-uv-build is required
-    (propagated-inputs (list python-anyio python-typing-extensions))
-    (native-inputs (list python-poetry-core python-pytest))
-    (home-page "https://github.com/davidbrochart/sqlite-anyio")
-    (synopsis "Asynchronous client for SQLite using AnyIO")
-    (description "This package provides an asynchronous client for SQLite
-using @code{AnyIO}.")
-    (license license:expat)))
-
 (define-public python-sqlitedict
   (package
     (name "python-sqlitedict")
@@ -1186,196 +1155,104 @@ autocompletion and syntax highlighting.")
 auto-completion and syntax highlighting.")
     (license license:bsd-3)))
 
+;; XXX When updating, check whether boost-for-mysql is still needed.
+;; It might suffice to patch ‘cmake/boost.cmake’ as done in the past.
 (define-public mysql
   (package
     (name "mysql")
-    (version "9.7.0")
+    (version "5.7.33")
     (source (origin
-              (method url-fetch)
+             (method url-fetch)
-              (uri (list (string-append
+             (uri (list (string-append
-                          "https://cdn.mysql.com/Downloads/MySQL-"
+                          "https://dev.mysql.com/get/Downloads/MySQL-"
                           (version-major+minor version) "/"
+                          name "-" version ".tar.gz")
+                        (string-append
+                          "https://downloads.mysql.com/archives/get/file/"
                           name "-" version ".tar.gz")))
-              (sha256
+             (sha256
-               (base32
+              (base32
-                "0v9hc8yzp0f5pwl4kr1a8k7lwyf62g95klxb6avfrc2npjx79dbl"))
+               "1bb343mf7n0qg2qz497gxjsqprygrjz1q1pbz76hgqxnsy08sfxd"))))
-              (modules '((guix build utils)
-                         (ice-9 ftw)
-                         (srfi srfi-26)))
-              (snippet
-               #~(begin
-                   (define (delete-all-but directory . preserve)
-                     (with-directory-excursion directory
-                       (let* ((pred (negate (cut member <>
-                                                 (cons* "." ".." preserve))))
-                              (items (scandir "." pred)))
-                         (for-each (cut delete-file-recursively <>) items))))
-
-                   ;; Delete bundled source libraries.
-                   (delete-all-but "extra"
-                                   ;; XXX: The build system doesn't currently
-                                   ;; support unbundling these.
-                                   "json" ;used by bundled opentelemetry
-                                   "libbacktrace"
-                                   "libcno"
-                                   "opentelemetry-cpp"
-                                   "opentelemetry-proto"
-                                   "rapidjson"
-                                   "unordered_dense"
-                                   "xxhash")))))
     (build-system cmake-build-system)
     (arguments
-     (list
+     `(#:configure-flags
-      #:tests? #f          ;FIXME: teach build system to use system googletest
+       '("-DBUILD_CONFIG=mysql_release"
-      #:configure-flags
+         "-DWITH_SSL=system"
-      #~(list "-DBUILD_CONFIG=mysql_release"
+         "-DWITH_ZLIB=system"
-              "-DWITH_AUTHENTICATION_LDAP=ON"
+         "-DDEFAULT_CHARSET=utf8"
-              "-DWITH_AUTHENTICATION_WEBAUTHN=ON"
+         "-DDEFAULT_COLLATION=utf8_general_ci"
-              "-DWITH_BENCHMARK=OFF"
+         "-DMYSQL_DATADIR=/var/lib/mysql"
-              ;; XXX: BUILD_ID is disabled so that the INFO_BIN target is not
+         "-DMYSQL_UNIX_ADDR=/run/mysqld/mysqld.sock"
-              ;; run; this target relies on running mysqld before it is
+         "-DINSTALL_INFODIR=share/mysql/docs"
-              ;; installed, which fails in our case.
+         "-DINSTALL_MANDIR=share/man"
-              "-DWITH_BUILD_ID=OFF"
+         "-DINSTALL_PLUGINDIR=lib/mysql/plugin"
-              "-DWITH_FIDO=system"
+         "-DINSTALL_SCRIPTDIR=bin"
-              "-DWITH_SYSTEM_LIBS=ON"
+         "-DINSTALL_INCLUDEDIR=include/mysql"
-              "-DWITH_UNIT_TESTS=OFF"   ;avoid bundled googletest
+         "-DINSTALL_DOCREADMEDIR=share/mysql/docs"
-              "-DREPRODUCIBLE_BUILD=ON"
+         "-DINSTALL_SUPPORTFILESDIR=share/mysql"
-              "-DMYSQL_DATADIR=/var/lib/mysql"
+         "-DINSTALL_MYSQLSHAREDIR=share/mysql"
-              "-DMYSQL_UNIX_ADDR=/run/mysqld/mysqld.sock"
+         "-DINSTALL_DOCDIR=share/mysql/docs"
-              "-DINSTALL_INFODIR=share/info"
+         "-DINSTALL_SHAREDIR=share/mysql"
-              "-DINSTALL_MANDIR=share/man"
+         ;; Get rid of test data.
-              "-DINSTALL_PLUGINDIR=lib/mysql/plugin"
+         "-DINSTALL_MYSQLTESTDIR="
-              "-DINSTALL_INCLUDEDIR=include/mysql"
+         "-DINSTALL_SQLBENCHDIR=")
-              "-DINSTALL_DOCREADMEDIR=share/mysql/docs"
+       #:phases (modify-phases %standard-phases
-              "-DINSTALL_SUPPORTFILESDIR=share/mysql"
+                  (add-after
-              "-DINSTALL_MYSQLSHAREDIR=share/mysql"
+                   'install 'remove-extra-binaries
-              "-DINSTALL_MYSQLTESTDIR=OFF"
+                   (lambda* (#:key outputs #:allow-other-keys)
-              "-DINSTALL_DOCDIR=share/mysql/docs"
+                     (let ((out (assoc-ref outputs "out")))
-              "-DINSTALL_SHAREDIR=share/mysql")
+                       ;; Remove the 3 *_embedded files, which weigh in at
-      #:phases
+                       ;; 14 MiB each.
-      #~(modify-phases %standard-phases
+                       (for-each delete-file
-          (add-before 'configure 'disable-broken-abi-check
+                                 (find-files (string-append out "/bin")
-            (lambda _
+                                             "_embedded$"))
-              ;; The ABI check started failing with MySQL 9.7.0 for unknown
+                       #t)))
-              ;; reasons.
+                  (add-after
-              (substitute* "cmake/abi_check.cmake"
+                   'install 'wrap-mysql_helpers
-                (("RUN_ABI_CHECK 1")
+                   (lambda* (#:key inputs outputs #:allow-other-keys)
-                 "RUN_ABI_CHECK 0"))))
+                     (let* ((out (assoc-ref outputs "out"))
-          (add-after 'install 'remove-extra-binaries
+                            (bin (string-append out "/bin"))
-            (lambda _
+                            (awk (assoc-ref inputs "gawk"))
-              ;; Remove the 3 *_embedded files, which weigh in at
+                            (coreutils (assoc-ref inputs "coreutils"))
-              ;; 14 MiB each.
+                            (grep (assoc-ref inputs "grep"))
-              (for-each delete-file
+                            (ps (assoc-ref inputs "procps"))
-                        (find-files (string-append #$output "/bin")
+                            (sed (assoc-ref inputs "sed")))
-                                    "_embedded$"))))
+                       (wrap-program (string-append bin "/mysql_config")
-          (add-after 'install 'wrap-mysql_helpers
+                         `("PATH" ":" suffix
-            (lambda* (#:key inputs outputs #:allow-other-keys)
+                           (,(string-append awk "/bin")
-              (let ((bin (string-append #$output "/bin"))
+                            ,(string-append coreutils "/bin")
-                    (gawk (search-input-file inputs "bin/gawk"))
+                            ,(string-append sed "/bin"))))
-                    (coreutils (search-input-file inputs "bin/ls"))
+                       (wrap-program (string-append bin "/mysqld_safe")
-                    (grep (search-input-file inputs "bin/grep"))
+                         `("PATH" ":" suffix
-                    (ps (search-input-file inputs "bin/ps"))
+                           (,(string-append awk "/bin")
-                    (sed (search-input-file inputs "bin/sed")))
+                            ,(string-append coreutils "/bin")
-                (wrap-program (search-input-file outputs "bin/mysql_config")
+                            ,(string-append grep "/bin")
-                  `("PATH" suffix
+                            ,(string-append ps "/bin")
-                    ,(list (dirname gawk)
+                            ,(string-append sed "/bin"))))))))))
-                           (dirname coreutils)
-                           (dirname sed))))
-                (wrap-program (search-input-file outputs "bin/mysqld_safe")
-                  `("PATH" suffix
-                    ,(list (dirname gawk)
-                           (dirname coreutils)
-                           (dirname grep)
-                           (dirname ps)
-                           (dirname sed)))))))
-          (add-after 'install 'fix-permissions
-            ;; XXX: Otherwise, the guix daemon reports: "suspicious ownership
-            ;; or permission on `/gnu/store/...-mysql-9.7.0'; rejecting this
-            ;; build output".
-            (lambda _
-              (chmod #$output #o755))))))
     (native-inputs
      (list bison perl pkg-config))
     (inputs
      (list bash-minimal
-           boost
+           boost-for-mysql
            coreutils
-           curl
-           cyrus-sasl
            gawk
            grep
-           icu4c
            libaio
-           libedit
-           libfido2
            libtirpc
-           lz4
-           mit-krb5
            ncurses
-           openldap
+           openssl-1.1
-           openssl
-           protobuf
            procps
-           rpcsvc-proto                 ; rpcgen
+           rpcsvc-proto ; rpcgen
            sed
-           zlib
+           zlib))
-           `(,zstd "lib")))
     (home-page "https://www.mysql.com/")
     (synopsis "Fast, easy to use, and popular database")
     (description
      "MySQL is a fast, reliable, and easy to use relational database
 management system that supports the standardized Structured Query
 Language.")
-    (license license:gpl2)))    ;v2 only -- see 'Election of GPLv2' in LICENSE
-
-(define-public mysql-connector-python
-  (package
-    (name "mysql-connector-python")
-    (version "9.7.0")
-    (source
-     (origin
-       (method git-fetch)
-       (uri (git-reference
-              (url "https://github.com/mysql/mysql-connector-python")
-              (commit version)))
-       (file-name (git-file-name name version))
-       (sha256
-        (base32 "0zdm35apj1cfraxwlqfmr04pm87qpw73ilb8p88cn08zsa8q11hg"))))
-    (build-system pyproject-build-system)
-    (arguments
-     (list
-      #:phases
-      #~(modify-phases %standard-phases
-          (add-after 'unpack 'chdir
-            (lambda _
-              ;; Our protobuf is too old for the mysqlx dev API, so use the
-              ;; classic one without the C modules.
-              (chdir "mysql-connector-python")))
-          (replace 'check
-            (lambda* (#:key tests? #:allow-other-keys)
-              (when tests?
-                ;; Some of these tests might be failing due to the build
-                ;; container's restrictions, others are due to the version
-                ;; mismatch.
-                (mkdir-p "/tmp/datadir")
-                (invoke "python3" "unittests.py"
-                        "--verbosity=3"
-                        (string-append "--with-mysql=" #$(this-package-input "mysql"))
-                        "--keep"
-                        "--mysql-topdir=/tmp/datadir"
-                        "--unix-socket=/tmp/datadir")))))))
-    (native-inputs (list python-setuptools))
-    (inputs (list mysql openssl zlib `(,zstd "lib")))
-    (home-page "https://dev.mysql.com/doc/connector-python/en/index.html")
-    (synopsis "MySQL driver written in Python")
-    (description "MySQL Connector/Python enables Python programs to access
-MySQL databases, using an API that is compliant with the Python Database API
-Specification v2.0 (PEP 249).")
     (license license:gpl2)))
 
-(define-deprecated-package python-mysql-connector-python
-  mysql-connector-python)
-
 (define-public mariadb
   (package
     (name "mariadb")
@@ -1672,14 +1549,14 @@ and high-availability (HA).")
 (define-public postgresql-17
   (package
     (name "postgresql")
-    (version "17.10")
+    (version "17.7")
     (source (origin
               (method url-fetch)
               (uri (string-append "https://ftp.postgresql.org/pub/source/v"
                                   version "/postgresql-" version ".tar.bz2"))
               (sha256
                (base32
-                "144cb40gn1lasvz0jvz4i72mda8k7pm1bx6azq2vggfddm8h72h7"))
+                "1dg9labqgph2idaypb8khdvbag29pr3h4bqv5w8k7kgc08rk97pg"))
               (patches (search-patches
                         "postgresql-disable-normalize_exec_path.patch"))))
     (build-system gnu-build-system)
@@ -1742,14 +1619,14 @@ pictures, sounds, or video.")
   (package
     (inherit postgresql-17)
     (name "postgresql")
-    (version "16.14")
+    (version "16.10")
     (source (origin
               (method url-fetch)
               (uri (string-append "https://ftp.postgresql.org/pub/source/v"
                                   version "/postgresql-" version ".tar.bz2"))
               (sha256
                (base32
-                "0w9lgsn03m4k0v3m622v7fk3gqbfbjvwv34mrrc0i4ip4wa7gl7n"))
+                "0hib575m9x3z8c71gkcv9jsyq77d3qk7q2zgzvfy6clwrvs8b16y"))
               (patches (search-patches
                         "postgresql-disable-normalize_exec_path.patch"))))
     (arguments
@@ -1773,14 +1650,14 @@ pictures, sounds, or video.")
   (package
     (inherit postgresql-16)
     (name "postgresql")
-    (version "15.18")
+    (version "15.15")
     (source (origin
               (method url-fetch)
               (uri (string-append "https://ftp.postgresql.org/pub/source/v"
                                   version "/postgresql-" version ".tar.bz2"))
               (sha256
                (base32
-                "1d13qckpslfqamdmp23q3rbzxlp1rqwszylilyllpsp3gzwhvpqi"))
+                "1ais46b2ij38y75i1w336as03pybyndsd2pp2q8gdjq9igmsllsp"))
               (patches (search-patches
                         "postgresql-disable-resolve_symlinks.patch"))))
     (native-inputs (modify-inputs native-inputs
@@ -1793,7 +1670,6 @@ pictures, sounds, or video.")
     (inherit postgresql-15)
     (name "postgresql")
     (version "14.20")
-    (replacement postgresql-14.23)
     (source (origin
               (inherit (package-source postgresql-15))
               (uri (string-append "https://ftp.postgresql.org/pub/source/v"
@@ -1802,19 +1678,6 @@ pictures, sounds, or video.")
                (base32
                 "0sv45dsmyplfys6dfdjdwmrczl46s82x35xdh311nxj02q7z29vm"))))))
 
-(define-public postgresql-14.23
-  (package
-    (inherit postgresql-14)
-    (name "postgresql")
-    (version "14.23")
-    (source (origin
-              (inherit (package-source postgresql-14))
-              (uri (string-append "https://ftp.postgresql.org/pub/source/v"
-                                  version "/postgresql-" version ".tar.bz2"))
-              (sha256
-               (base32
-                "19clihp73ak2p5di90jhg50lqjkkr0iy349gkki30qsl5f11cwnc"))))))
-
 (define-deprecated/public postgresql-13 #f
   (package
     (inherit postgresql-14)
@@ -4293,8 +4156,8 @@ programmatically or as a standalone CLI application.")
        (file-name (git-file-name name version))))
     (build-system gnu-build-system)
     (inputs
-     (list openssl
+     `(("libcrypto" ,openssl)
-           tcl))                        ;for tests
+       ("libtcl8.6" ,tcl))) ; required for running the tests
     (native-inputs
      (list tcl))
     (arguments
@@ -4849,24 +4712,33 @@ PickleShare.")
 (define-public python-apsw
   (package
     (name "python-apsw")
-    (version "3.50.4.0")
+    (version "3.46.0.0")
+    ;; The compressed release has fetching functionality disabled.
     (source
      (origin
-       (method git-fetch)
+       (method url-fetch)
-       (uri (git-reference
+       (uri (string-append
-              (url "https://github.com/rogerbinns/apsw")
+             "https://github.com/rogerbinns/apsw/releases/download/"
-              (commit version)))
+             version "/apsw-" version ".zip"))
-       (file-name (git-file-name name version))
        (sha256
-        (base32 "0r9awjgpl9cmqz5xd4zbqrpiv0rv5c36a18jkqnsfky6n6sgr424"))))
+        (base32
+         "10yfbasi4mq63g0svyl1h49ylwn9znjylq78id16dzxzk9q9ipdx"))))
     (build-system pyproject-build-system)
-    (arguments
-     (list #:test-backend #~'custom
-           #:test-flags #~(list "-m" "apsw.tests")))
     (native-inputs
-     (list python-setuptools))
+     (list unzip python-setuptools python-wheel))
-    (inputs
+    (inputs (list sqlite-next))         ;SQLite 3.45.1 required.
-     (list sqlite-next))         ;SQLite 3.45.1 required.
+    (arguments
+     (list
+      #:phases
+      #~(modify-phases %standard-phases
+          (add-before 'build 'build-extensions
+            (lambda _
+              (invoke "python" "setup.py" "build" "--enable-all-extensions"
+                      "--enable=load_extension")))
+          (add-after 'build 'build-test-helper
+            (lambda _
+              (invoke "gcc" "-fPIC" "-shared" "-o" "./testextension.sqlext"
+                      "-I." "-Isqlite3" "src/testextension.c"))))))
     (home-page "https://github.com/rogerbinns/apsw/")
     (synopsis "Another Python SQLite Wrapper")
     (description
@@ -5174,54 +5046,6 @@ postgresql = postgresql://nixbld@/yoyo_test~%")))
 files or Python scripts that define a list of migration steps.")
     (license license:asl2.0)))
 
-(define-public mutastructura
-  (package
-    (name "mutastructura")
-    (version "0.6.0")
-    (source
-     (origin
-       (method git-fetch)
-       (uri (git-reference
-             (url "https://codeberg.org/jjba23/mutastructura")
-             (commit (string-append "v" version))))
-       (file-name (git-file-name name version))
-       (sha256
-        (base32 "08vzlc5imavqf3bdzgbh70c7z44xjhf05gr7i2g5ksl49lv39gzh"))))
-    (build-system guile-build-system)
-    (arguments
-     (list
-      #:source-directory "src"
-      #:phases
-      #~(modify-phases %standard-phases
-          (add-before 'build 'install-program-files
-            (lambda _
-              (let* ((bin (string-append #$output "/bin"))
-                     (share (string-append #$output "/share")))
-                (copy-recursively "resources"
-                                  (string-append share "/resources"))
-                (install-file "scripts/mutastructura" bin)
-                (install-file "scripts/log.bash"
-                              (string-append share "/scripts/"))
-                (chmod (string-append bin "/mutastructura") #o755)))))))
-    (native-inputs (list guile-3.0))
-    (propagated-inputs (list guile-dbi
-                             guile-dbd-mysql
-                             guile-dbd-sqlite3
-                             guile-dbd-postgresql
-                             guile-gcrypt))
-    (inputs (list guile-3.0 bash-minimal))
-    (home-page "https://codeberg.org/jjba23/mutastructura")
-    (synopsis "Relational database schema migrations powered by Guile Scheme")
-    (description
-     "Mutastructura provides a familiar, declarative and transactional
-approach to managing database states. It exposes a user-friendly 
-@acronym{CLI, command-line interface} and has support for PostgreSQL, MySQL, and SQLite.
-It also exposes library functions and can be imported and used directly from other Guile code.
-
-Features include executing migrations transactionally and computing SHA256
-checksums to track schema evolution in a @code{migrations_history} table.")
-    (license license:agpl3+)))
-
 (define-public python-mysqlclient
   (package
     (name "python-mysqlclient")
@@ -5665,7 +5489,7 @@ with integrated support for finding required rows quickly.")
 (define-public apache-arrow
   (package
     (name "apache-arrow")
-    (version "24.0.0")
+    (version "23.0.1")
     (source
      (origin
        (method git-fetch)
@@ -5675,7 +5499,7 @@ with integrated support for finding required rows quickly.")
        (file-name (git-file-name name version))
        (sha256
         (base32
-         "1j3gs5ffa9gx2y2nggmi2zn5rj0bsnjnxrzfnipx6050jz6n8dx9"))))
+         "1qn7wgavi3kiz4d6w1naqj5631bg87fnj6gbhaxmpmynm5hi9wm7"))))
     (build-system cmake-build-system)
     (arguments
      (list
@@ -5844,7 +5668,6 @@ __version_tuple__ = version_tuple = (~a)~%" version version-tuple))))))
            python-cython
            python-pytest
            python-pytest-runner
-           python-scikit-build-core
            python-setuptools-scm
            python-setuptools))
     (outputs '("out"))
@@ -6441,7 +6264,7 @@ mechanism of @code{dogpile}.")
 (define-public datasette
   (package
     (name "datasette")
-    (version "1.0a26")
+    (version "1.0a19")
     (source
      (origin
        (method git-fetch)
@@ -6450,20 +6273,23 @@ mechanism of @code{dogpile}.")
               (commit version)))
        (file-name (git-file-name name version))
        (sha256
-        (base32 "1ra0yfrz9w3jx7ix3dmcsg0g8hjxkz37586g7ijmqshxpzczxfm7"))))
+        (base32 "0wb73iksrc5vg2lnq3q4vr7yhlzxwr711jfmjdndd0s77996zsfh"))))
     (build-system pyproject-build-system)
     (arguments
      (list
-      ;; tests: 1720 passed, 9 skipped, 8 xfailed, 13 xpassed, 3 warnings, 120
-      ;; subtests passed
       #:test-flags
-      #~(list "--numprocesses" (number->string (min 8 (parallel-job-count)))
+      ;; See https://github.com/simonw/datasette/issues/2048
-              "--ignore=tests/test_black.py")
+      #~(list "-k" (string-append
+                    ;; These contain two unexpected extra items.
+                    "not test_searchable"
+                    " and not test_searchmode")
+              "--ignore=tests/test_black.py"
+              "-n" (number->string (parallel-job-count)))
       #:phases
       #~(modify-phases %standard-phases
           (add-after 'unpack 'relax-requirements
             (lambda _
-              (substitute* "pyproject.toml"
+              (substitute* "setup.py"
                 (("\"pip\",") "")))))))
     (propagated-inputs
      (list python-aiofiles
@@ -6478,6 +6304,7 @@ mechanism of @code{dogpile}.")
            python-janus
            python-jinja2
            python-mergedeep
+           python-pint
            python-pluggy
            python-pyyaml
            python-sqlite-utils
@@ -6486,9 +6313,9 @@ mechanism of @code{dogpile}.")
      (list nss-certs-for-test
            python-beautifulsoup4
            python-cogapp
-           python-multipart-form-data-conformance
            python-pytest
-           python-pytest-asyncio
+           python-pytest-asyncio-0.26
+           python-pytest-runner
            python-pytest-timeout
            python-pytest-xdist
            python-setuptools

gnu/packages/datalog.scm

@@ -1,113 +0,0 @@
-;;; GNU Guix --- Functional package management for GNU
-;;; Copyright © 2026 Arun Isaac <arunisaac@systemreboot.net>
-;;;
-;;; This file is part of GNU Guix.
-;;;
-;;; GNU Guix is free software; you can redistribute it and/or modify it
-;;; under the terms of the GNU General Public License as published by
-;;; the Free Software Foundation; either version 3 of the License, or (at
-;;; your option) any later version.
-;;;
-;;; GNU Guix is distributed in the hope that it will be useful, but
-;;; WITHOUT ANY WARRANTY; without even the implied warranty of
-;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
-;;; GNU General Public License for more details.
-;;;
-;;; You should have received a copy of the GNU General Public License
-;;; along with GNU Guix.  If not, see <http://www.gnu.org/licenses/>.
-
-(define-module (gnu packages datalog)
-  #:use-module (gnu packages bison)
-  #:use-module (gnu packages compression)
-  #:use-module (gnu packages cpp)
-  #:use-module (gnu packages compiler-tools)
-  #:use-module (gnu packages libffi)
-  #:use-module (gnu packages ncurses)
-  #:use-module (gnu packages python)
-  #:use-module (gnu packages sqlite)
-  #:use-module (guix build-system cmake)
-  #:use-module (guix gexp)
-  #:use-module (guix git-download)
-  #:use-module ((guix licenses) #:prefix license:)
-  #:use-module (guix packages))
-
-(define-public souffle
-  (package
-    (name "souffle")
-    (version "2.5")
-    (source (origin
-              (method git-fetch)
-              (uri (git-reference
-                     (url "https://github.com/souffle-lang/souffle")
-                     (commit version)))
-              (file-name (git-file-name name version))
-              (sha256
-               (base32
-                "1lrw69g02b17vxxz4g7cj8hbmc39wlzl80vl5fwy40a6b9pxwrsj"))
-              (snippet
-               #~(begin
-                   ;; Delete bundled dependencies. souffle also uses a forked
-                   ;; and modified version of json11. We cannot unbundle
-                   ;; that.
-                   (for-each delete-file
-                             (list "licenses/TCBRINDLE SPAN.txt"
-                                   "licenses/TINYFORMAT.txt"
-                                   "src/include/souffle/utility/span.h"
-                                   "src/include/souffle/utility/tinyformat.h"))))))
-    (build-system cmake-build-system)
-    (arguments
-     (list #:configure-flags #~(list "-DSOUFFLE_GIT=OFF"
-                                     (string-append "-DPACKAGE_VERSION="
-                                                    #$version))
-           ;; We disable these tests since they fail with gcc 14. This issue
-           ;; has been reported upstream:
-           ;; https://github.com/souffle-lang/souffle/issues/2576
-           #:test-exclude (string-join
-                           (list "syntactic/cpp_keywords_run_souffle"
-                                 "syntactic/cpp_keywords_c_run_souffle"
-                                 "syntactic/cpp_keywords_compare_std_outputs"
-                                 "syntactic/cpp_keywords_compare_csv"
-                                 "syntactic/cpp_keywords_c_compare_std_outputs"
-                                 "syntactic/cpp_keywords_c_compare_csv")
-                           "|")
-           #:phases
-           #~(modify-phases %standard-phases
-               (add-after 'unpack 'replace-bundled-libraries
-                 (lambda _
-                   ;; Patch souffle to use tinyformat from Guix.
-                   (substitute* (find-files "src" "\\.(cpp|h)$")
-                     (("#include \"souffle/utility/tinyformat.h\"")
-                      "#include <tinyformat.h>"))
-                   ;; Replace span.h with a header that uses span from Guix
-                   ;; and provides the same namespace.
-                   (call-with-output-file "src/include/souffle/utility/span.h"
-                     (lambda (port)
-                       (display "#pragma once
-#include <span.hpp>
-namespace souffle {
-  using tcb::span;
-}
-"
-                                port))))))))
-    (inputs
-     (list libffi
-           ncurses
-           python
-           span
-           sqlite
-           zlib))
-    (native-inputs
-     (list bison
-           flex
-           tinyformat))
-    (home-page "https://souffle-lang.github.io/")
-    (synopsis "Datalog variant")
-    (description "Soufflé is a variant of Datalog for tool designers crafting
-analyses in Horn clauses.  Soufflé synthesizes a native parallel C++ program
-from a logic specification.  The Soufflé language is similar to Datalog (but
-has terms known as records), and is frequently used as a domain-specific
-language for analysis problems.")
-    (license (list license:upl          ; main license
-                   ;; src/include/souffle/profile/htmlJsChartistPlugin.h
-                   ;; src/include/souffle/utility/json11.h
-                   license:expat))))

gnu/packages/dav.scm

@@ -27,6 +27,7 @@
 (define-module (gnu packages dav)
   #:use-module (guix build-system cargo)
   #:use-module (guix build-system gnu)
+  #:use-module (guix build-system python)
   #:use-module (guix build-system pyproject)
   #:use-module (guix download)
   #:use-module (guix gexp)
@@ -142,6 +143,9 @@ CardDAV server with a local folder or file.")
     (build-system pyproject-build-system)
     (native-inputs
      (list python-pytest
+           python-pytest-cov
+           python-pytest-flake8
+           python-pytest-isort
            python-setuptools
            python-waitress
            python-wheel))
@@ -240,6 +244,7 @@ efficient syncing
      (list python-aioresponses
            python-pytest
            python-pytest-asyncio
+           python-pytest-cov
            python-pytest-httpserver
            python-setuptools
            python-setuptools-scm

gnu/packages/debug.scm

@@ -58,7 +58,7 @@
   #:use-module (gnu packages code)
   #:use-module (gnu packages compression)
   #:use-module (gnu packages digest)
-  #:use-module (gnu packages compiler-tools)
+  #:use-module (gnu packages flex)
   #:use-module (gnu packages fontutils)
   #:use-module (gnu packages gcc)
   #:use-module (gnu packages gdb)
@@ -77,6 +77,7 @@
   #:use-module (gnu packages mail)
   #:use-module (gnu packages multiprecision)
   #:use-module (gnu packages ncurses)
+  #:use-module (gnu packages ninja)
   #:use-module (gnu packages perl)
   #:use-module (gnu packages pkg-config)
   #:use-module (gnu packages pretty-print)
@@ -262,7 +263,7 @@ simple way to add custom protocol messages.")
 (define-public c-vise
   (package
     (name "c-vise")
-    (version "2.8.0")
+    (version "2.4.0")
     (source
      (origin
        (method git-fetch)
@@ -270,53 +271,37 @@ simple way to add custom protocol messages.")
              (url "https://github.com/marxin/cvise")
              (commit (string-append "v" version))))
        (sha256
-        (base32 "1ynhm1d56r25apgvv0wqbdrhjbwigkwrgw92g2czz4nfx77rjxz2"))
+        (base32 "1i2z5q2pcwh1gpdqc24x1a2q5vzwhblzzq021nzwf304di7m18vl"))
        (file-name (git-file-name name version))))
     (build-system cmake-build-system)
-    (arguments
-     (list
-      #:phases
-      #~(modify-phases %standard-phases
-          (add-after 'unpack 'fix-linkage
-            (lambda _
-              (substitute* "clang_delta/CMakeLists.txt"
-                (("\\$\\{LLVM_LINK_LLVM_DYLIB\\}")
-                 "True")
-                (("  LLVM")
-                 "  LLVMSupport"))))
-          (add-before 'build 'hardcode-paths
-            (lambda _
-              (substitute* "cvise.py"
-                (("/bin/bash")
-                 (which "bash"))
-                (("(.*)# Special case for clang-format" all blank)
-                 (format #f "~a# Special case for unifdef
-~aprograms['unifdef'] = ~s
-~a"
-                         blank blank (which "unifdef") all)))))
-          (add-after 'install 'wrap
-            (lambda _
-              (let ((python-path (getenv "GUIX_PYTHONPATH")))
-                (wrap-program (string-append #$output "/bin/cvise")
-                  `("PYTHONPATH" ":" prefix
-                    (,(string-join
-                       (filter (lambda (cand)
-                                 (not (string-contains cand "pytest")))
-                               (string-split python-path #\:))
-                       ":"))))))))))
     (native-inputs
-     (list flex
+     (list flex python-pytest python-pytest-flake8))
-           python-pytest
-           python-pytest-flake8))
     (inputs
-     (list bash-minimal
+     (list bash-minimal clang llvm unifdef
-           clang
+           python python-pebble python-psutil python-chardet))
-           llvm
+    (arguments
-           unifdef
+     `(#:phases
-           python
+       (modify-phases %standard-phases
-           python-pebble
+         (add-after 'unpack 'fix-linkage
-           python-psutil
+           (lambda _
-           python-chardet))
+            (substitute* "clang_delta/CMakeLists.txt"
+              (("\\$\\{LLVM_LINK_LLVM_DYLIB\\}") "True")
+              (("  LLVM") "  LLVMSupport"))))
+         (add-before 'build 'hardcode-paths
+           (lambda _
+            (substitute* "cvise.py"
+              (("/bin/bash") (which "bash"))
+              (("(.*)# Special case for clang-format" & >)
+               (string-append > "# Special case for unifdef\n"
+                              > "programs['unifdef'] = '" (which "unifdef") "'\n"
+                              &)))))
+         (add-after 'install 'wrap
+           (lambda* (#:key outputs #:allow-other-keys)
+             (let ((out (assoc-ref outputs "out"))
+                   (python-path (getenv "GUIX_PYTHONPATH")))
+               (wrap-program (string-append out "/bin/cvise")
+                 `("PYTHONPATH" ":" prefix (,python-path)))
+               #t))))))
     (home-page "https://github.com/marxin/cvise")
     (synopsis "Reducer for interesting code")
     (description
@@ -993,27 +978,26 @@ engineering.")
 (define-public seer-gdb
   (package
     (name "seer-gdb")
-    (version "2.7")
+    (version "1.16")
-    (source
+    (source (origin
-     (origin
+              (method git-fetch)
-       (method git-fetch)
+              (uri (git-reference
-       (uri (git-reference
+                     (url "https://github.com/epasveer/seer.git")
-             (url "https://github.com/epasveer/seer")
+                     (commit (string-append "v" version))))
-             (commit (string-append "v" version))))
+              (file-name (string-append name "-" version "-checkout"))
-       (file-name (git-file-name name version))
+              (sha256
-       (sha256
+               (base32
-        (base32 "1szfqybqr5z982vian4f0hpsagiqapzys3axwibyjyg5whjswva1"))))
+                "0jdvyg2jab1pvf36pvkyrfsg2wyy8zp1qx0v2ksclgrnr1hja6k6"))))
     (build-system qt-build-system)
     (arguments
-     (list
+     `(#:tests? #f ; Those are strangely manual
-      #:tests? #f                       ;tests are strangely manual
+       #:phases
-      #:phases
+       (modify-phases %standard-phases
-      #~(modify-phases %standard-phases
+         (add-after 'unpack 'chdir
-          (add-after 'unpack 'chdir
+           (lambda _
-            (lambda _
+             (chdir "src"))))))
-              (chdir "src"))))))
     (inputs
-     (list gdb qtbase qtcharts qtsvg qtwayland))
+     (list qtbase-5 qtcharts-5 qtwayland-5))
     (synopsis "GUI frontend for GDB")
     (description "This package provides a frontend to GDB, the GNU debugger.")
     (home-page "https://github.com/epasveer/seer")
@@ -1053,7 +1037,7 @@ to aid in debugging.")
 (define-public delve
   (package
     (name "delve")
-    (version "1.26.3")
+    (version "1.25.2")
     (source
      (origin
        (method git-fetch)
@@ -1063,7 +1047,7 @@ to aid in debugging.")
        (file-name (git-file-name name version))
        (sha256
         (base32
-         "0mf363l7md4193cgrpb6hkhmsgnlnrx44q1bzw3zq0bmjrcg3fj7"))
+         "1b6vp6m4vjx4wfs1djhpizvz40s563jwld9lgjq82svaiilrmlqa"))
        (snippet
         #~(begin (use-modules (guix build utils))
                  (delete-file-recursively "vendor")))))
@@ -1081,7 +1065,7 @@ to aid in debugging.")
      (list go-github-com-cilium-ebpf
            go-github-com-cosiner-argv
            go-github-com-creack-pty
-           go-github-com-derekparker-trie-v3
+           go-github-com-derekparker-trie
            go-github-com-go-delve-liner
            go-github-com-google-go-dap
            go-github-com-hashicorp-golang-lru
@@ -1229,7 +1213,7 @@ and input distributions can also be expressed in Fandango.")
                           ;; Shorten paths to sockets in tests.
                           (lambda _ (setenv "TMPDIR" "/tmp"))))
            #:test-target "test"))
-    (native-inputs (list python python-setuptools)) ; for tests
+    (native-inputs (list python))      ; for tests
     (synopsis "Fault injector in userspace")
     (description "Fiu provides CLI utilities and a C library
 to mark points of failure inside your code

gnu/packages/dictionaries.scm

@@ -41,6 +41,7 @@
   #:use-module (guix build-system copy)
   #:use-module (guix build-system gnu)
   #:use-module (guix build-system pyproject)
+  #:use-module (guix build-system python)
   #:use-module (guix build-system qt)
   #:use-module (guix build-system trivial)
   #:use-module (gnu packages)
@@ -48,7 +49,6 @@
   #:use-module (gnu packages base)
   #:use-module (gnu packages bash)
   #:use-module (gnu packages bison)
-  #:use-module (gnu packages build-tools)
   #:use-module (gnu packages check)
   #:use-module (gnu packages compression)
   #:use-module (gnu packages cpp)
@@ -56,7 +56,7 @@
   #:use-module (gnu packages curl)
   #:use-module (gnu packages education)
   #:use-module (gnu packages emacs)
-  #:use-module (gnu packages compiler-tools)
+  #:use-module (gnu packages flex)
   #:use-module (gnu packages fribidi)
   #:use-module (gnu packages gettext)
   #:use-module (gnu packages glib)
@@ -122,83 +122,58 @@ Carnegie Mellon University.")
               "https://github.com/cmusphinx/cmudict/blob/master/LICENSE"))))
 
 (define-public dico
-  (let ((commit "05da4bc9e613834fdb065e38c7181044d8889575")
+  (package
-        (revision "0"))
+    (name "dico")
-    (package
+    (version "2.12")
-      (name "dico")
+    (source (origin
-      (version (git-version "2.12" revision commit))
+              (method url-fetch)
-      (source
+              (uri (string-append "mirror://gnu/dico/dico-"
-       (origin
+                                  version ".tar.xz"))
-         (method git-fetch)
+              (sha256
-         (uri (git-reference
+               (base32
-                (url "https://git.gnu.org.ua/dico.git")
+                "1xvahrav8aml90qcj4cj3a33y0n7nm1k0ywgks1zy2q91v2qk2vj"))))
-                (commit commit)
+    (build-system gnu-build-system)
-                (recursive? #t)))
+    (arguments
-         (file-name (git-file-name name version))
+     (list
-         (sha256
+      #:configure-flags #~(list "--disable-static")
-          (base32 "1fmr01gpvvb1p6p9ylr67nqx8ymmmkqjhsi9y5zvp2nc32cgxvah"))))
+      #:phases
-      (build-system gnu-build-system)
+      #~(modify-phases %standard-phases
-      (arguments
+          (add-before 'build 'set-shell-file-name
-       (list
+            (lambda* (#:key inputs #:allow-other-keys)
-        #:configure-flags #~(list "--disable-static")
+              ;; This code invokes "/bin/sh -c 'm4 -s ...'".
-        #:phases
+              (substitute* "grecs/src/grecs-lex.c"
-        #~(modify-phases %standard-phases
+                (("\"/bin/sh\"")
-            (replace 'bootstrap
+                 (string-append "\""
-              (lambda* (#:key inputs #:allow-other-keys)
+                                (search-input-file inputs "/bin/sh")
-                (substitute* "grecs/bootstrap"
+                                "\"")))))
-                  (("/bin/sh")
+          (add-before 'check 'silence-guile
-                   (which "bash"))
+            (lambda _
-                  ((" GRECS_GIT_ID=.*")
+              ;; Guile is too talkative, which disturbs the test
-                   " GRECS_GIT_ID=v1.0-25-g51b12be\n"))
+              ;; infrastructure.  Gag it.
-                (invoke "perl" "./bootstrap" "--force" "--skip-po")))
+              (setenv "GUILE_AUTO_COMPILE" "0")
-            (add-before 'build 'post-configure
+              (setenv "GUILE_WARN_DEPRECATED" "no"))))))
-              (lambda* (#:key inputs #:allow-other-keys)
+    (native-inputs (list groff))
-                ;; For some reason, this file is missing.
+    (inputs
-                (install-file "gnulib/lib/getopt.c"
+     (list m4                           ;used at run time
-                              "xdico/gnu")
+           bash-minimal                 ;likewise
-                ;; This code invokes "/bin/sh -c 'm4 -s ...'".
+           pcre
-                (substitute* "grecs/src/grecs-lex.l"
+           python-wrapper
-                  (("\"/bin/sh")
+           guile-3.0
-                   (string-append "\""
+           gsasl
-                                  (search-input-file inputs "/bin/sh"))))))
+           readline
-
+           zlib
-            (add-before 'check 'silence-guile
+           wordnet
-              (lambda _
+           libxcrypt                    ;for 'crypt'
-                ;; Guile is too talkative, which disturbs the test
+           libltdl))
-                ;; infrastructure.  Gag it.
+    (home-page "https://www.gnu.org.ua/software/dico/")
-                (setenv "GUILE_AUTO_COMPILE" "0")
+    (synopsis "Implementation of DICT server (RFC 2229)")
-                (setenv "GUILE_WARN_DEPRECATED" "no"))))))
+    (description
-      (native-inputs
+     "GNU Dico implements a flexible dictionary server and client according to
-       (list autoconf-2.71
+RFC 2229 (DICT Server).  It is able to access any database available,
-             automake
-             bison
-             flex
-             gettext-minimal
-             groff
-             libtool
-             perl
-             texinfo))
-      (inputs
-       (list m4                           ;used at run time
-             bash-minimal                 ;likewise
-             pcre
-             python-wrapper
-             guile-3.0
-             gsasl
-             readline
-             zlib
-             wordnet
-             libxcrypt                    ;for 'crypt'
-             libltdl))
-      (home-page "https://www.gnu.org.ua/software/dico/")
-      (synopsis "Implementation of DICT server (RFC 2229)")
-      (description
-       "GNU Dico implements a flexible dictionary server and client according
-to RFC 2229 (DICT Server).  It is able to access any database available,
 regardless of format, thanks to its modular structure.  New modules may be
 written in C, Guile or Python.  Dico also includes a command-line client,
 which may be used to query remote dictionary databases.")
-      (license license:gpl3+))))
+    (license license:gpl3+)))
 
 (define-public libmaa
   (package

gnu/packages/diffoscope.scm

@@ -67,6 +67,7 @@
   #:use-module (gnu packages vim)
   #:use-module (gnu packages web)
   #:use-module (gnu packages xml)
+  #:use-module (guix build-system python)
   #:use-module (guix build-system pyproject)
   #:use-module (guix gexp)
   #:use-module (guix git-download)
@@ -289,6 +290,14 @@ install.")
               (for-each (lambda (file)
                           (chmod file #o755))
                         (find-files #$output "autopkgtest-virt-.*"))))
+          ;; Adjust use of importlib.resources to use python 3.10 compatible
+          ;; syntax, which requires an argument.
+          ;; Drop when switching to python 3.12+.
+          (add-after 'unpack 'adjust-importlib-resources-for-old-python
+            (lambda _
+              (substitute* "reprotest/__init__.py"
+                (("importlib.resources.files\\(\\)")
+                  "importlib.resources.files(package='reprotest')"))))
           (add-after 'unpack 'skip-most-tests
             ;; These tests require functionality not available in the guix
             ;; build environment

gnu/packages/digest.scm

@@ -27,6 +27,7 @@
   #:use-module (guix git-download)
   #:use-module (guix build-system gnu)
   #:use-module (guix build-system pyproject)
+  #:use-module (guix build-system python)
   #:use-module (guix build-system trivial)
   #:use-module (guix utils)
   #:use-module (gnu packages check)

gnu/packages/disk.scm

@@ -31,7 +31,7 @@
 ;;; Copyright © 2023 Zheng Junjie <873216071@qq.com>
 ;;; Copyright © 2024-2025 Sharlatan Hellseher <sharlatanus@gmail.com>
 ;;; Copyright © 2025 Ashish SHUKLA <ashish.is@lostca.se>
-;;; Copyright © 2025, 2026 Vinicius Monego <monego@posteo.net>
+;;; Copyright © 2025 Vinicius Monego <monego@posteo.net>
 ;;; Copyright © 2025 Grigory Shepelev <shegeley@gmail.com>
 ;;; Copyright © 2026 Luis Guilherme Coelho <lgcoelho@disroot.org>
 
@@ -59,6 +59,7 @@
   #:use-module (guix build-system meson)
   #:use-module (guix build-system perl)
   #:use-module (guix build-system pyproject)
+  #:use-module (guix build-system python)
   #:use-module (guix build-system qt)
   #:use-module (guix build-system scons)
   #:use-module (guix build-system trivial)
@@ -93,8 +94,6 @@
   #:use-module (gnu packages gnome)
   #:use-module (gnu packages gnupg)
   #:use-module (gnu packages golang-build)
-  #:use-module (gnu packages golang-check)
-  #:use-module (gnu packages golang-compression)
   #:use-module (gnu packages golang-xyz)
   #:use-module (gnu packages graphics)
   #:use-module (gnu packages gtk)
@@ -105,6 +104,7 @@
   #:use-module (gnu packages libbsd)
   #:use-module (gnu packages linux)
   #:use-module (gnu packages ncurses)
+  #:use-module (gnu packages ninja)
   #:use-module (gnu packages nss)
   #:use-module (gnu packages perl)
   #:use-module (gnu packages perl-web)
@@ -264,14 +264,14 @@ tmpfs/ramfs filesystems.")
 (define-public parted
   (package
     (name "parted")
-    (version "3.7")
+    (version "3.6")
     (source (origin
               (method url-fetch)
               (uri (string-append "mirror://gnu/parted/parted-"
                                   version ".tar.xz"))
               (sha256
                (base32
-                "0yzga4cjq3yplqs47dl9714vwc3v3v8nxrj80rdc5wx4c5syb380"))))
+                "04p6b4rygrfd1jrskwrx3bn2icajg1mvbfhyc0c9l3ya7kixnhrv"))))
     (build-system gnu-build-system)
     (arguments
      (list
@@ -294,7 +294,6 @@ tmpfs/ramfs filesystems.")
        (,util-linux "lib")))
     (native-inputs
      (list gettext-minimal
-           pkg-config
 
            ;; For the tests.
            e2fsprogs
@@ -309,6 +308,18 @@ tmpfs/ramfs filesystems.")
 tables.  It includes a library and command-line utility.")
     (license license:gpl3+)))
 
+(define-public parted-3.4
+  (package
+    (inherit parted)
+    (version "3.4")
+    (source (origin
+              (method url-fetch)
+              (uri (string-append "mirror://gnu/parted/parted-"
+                                  version ".tar.xz"))
+              (sha256
+               (base32
+                "0hjkv84x1bs2qqyx1fnzjqyyqrhv7kpdbq9bgydmi99d8wi80ag1"))))))
+
 (define-public fdisk
   (package
     (name "fdisk")
@@ -409,49 +420,6 @@ tables, and it understands a variety of different formats.")
 similarity.")
     (license license:gpl3+)))
 
-(define-public gdu
-  (package
-    (name "gdu")
-    (version "5.35.0")
-    (source
-     (origin
-       (method git-fetch)
-       (uri (git-reference
-             (url "https://github.com/dundee/gdu")
-             (commit (string-append "v" version))))
-       (file-name (git-file-name name version))
-       (sha256
-        (base32 "051xf3wncdiavjwyl9djmni5vd2dqjgn6drkw2nm21c9l0rjfv6d"))))
-    (build-system go-build-system)
-    (arguments
-     (list
-      #:install-source? #f
-      #:import-path "github.com/dundee/gdu/v5/cmd/gdu"
-      #:unpack-path "github.com/dundee/gdu/v5"))
-    (native-inputs
-     (list go-github-com-dgraph-io-badger-v4
-           go-github-com-fatih-color
-           go-github-com-gdamore-tcell-v2
-           go-github-com-h2non-filetype
-           go-github-com-maruel-natural
-           go-github-com-mattn-go-isatty
-           go-github-com-pkg-errors
-           go-github-com-rivo-tview
-           go-github-com-sirupsen-logrus
-           go-github-com-spf13-cobra
-           go-github-com-stretchr-testify
-           go-github-com-ulikunitz-xz
-           go-golang-org-x-sys
-           go-golang-org-x-text
-           go-gopkg-in-yaml-v3
-           go-modernc-org-sqlite))
-    (home-page "https://github.com/dundee/gdu")
-    (synopsis "Disk usage analyzer")
-    (description "Gdu is a disk usage analyzer written in Go.  It is intended
-primarily for SSD disks where it can fully utilize parallel processing, but it
-also works on HDDs.")
-    (license license:expat)))
-
 (define-public gpart
   ;; The latest (0.3) release is from 2015 and is missing a crash fix.
   (let ((commit "ec03350a01ad69708b5a3e2d47b8e002b0eba6c9")
@@ -1224,25 +1192,16 @@ and its highly optimized now for efficient performance.")
   (package
     (name "volume-key")
     (version "0.3.12")
-    (source
+    (source (origin
-     (origin
+              (method url-fetch)
-       (method git-fetch)
+              (uri (string-append "https://releases.pagure.org/volume_key/volume_key-"
-       (uri (git-reference
+                                  version ".tar.xz"))
-              (url "https://pagure.io/volume_key")
+              (sha256
-              (commit (string-append "volume_key-" version))))
+               (base32
-       (file-name (git-file-name name version))
+                "16rhfz6sjwxlmss1plb2wv2i3jq6wza02rmz1d2jrlnsq67p98vc"))))
-       (sha256
-        (base32 "0zadzbh26ckk263w02d02r2x3mry2kxbybkhwwaxwpv6jsrm7xr6"))))
     (build-system gnu-build-system)
     (native-inputs
-     (list autoconf
+     (list pkg-config swig-4.0 python-3))           ; used to generate the Python bindings
-           automake
-           gettext-minimal
-           libtool
-           pkg-config
-           python       ; used to generate the Python bindings
-           python-setuptools
-           swig))
     (inputs
      (append
       (cons cryptsetup-minimal (libcryptsetup-propagated-inputs))
@@ -1252,21 +1211,15 @@ and its highly optimized now for efficient performance.")
             glib
             gpgme)))
     (arguments
-     (list
+     `(#:tests? #f ; not sure how tests are supposed to pass, even when run manually
-      #:tests? #f ; not sure how tests are supposed to pass, even when run manually
+       #:phases
-      #:configure-flags
+       (modify-phases %standard-phases
-      #~(list "--without-python"
+         (add-before 'configure 'patch-python.h-path
-              (string-append "--with-gpgme-prefix="
+           (lambda* (#:key inputs #:allow-other-keys)
-                             #$(this-package-input "gpgme")))
+             (let ((python (assoc-ref inputs "python")))
-      #:phases
+               (substitute* "Makefile.in"
-      #~(modify-phases %standard-phases
+                 (("/usr/include/python") (string-append python "/include/python")))
-          (add-before 'configure 'set-python-paths
+               #t))))))
-            (lambda* (#:key inputs #:allow-other-keys)
-              (let ((python #$(this-package-native-input "python")))
-                (setenv "PYTHON3"
-                        (string-append python "/bin/python3"))
-                (setenv "PYTHON3_CONFIG"
-                        (string-append python "/bin/python3-config"))))))))
     (home-page "https://pagure.io/volume_key")
     (synopsis "Manipulate storage volume encryption keys")
     (description

gnu/packages/distributed.scm

@@ -46,13 +46,12 @@
   #:use-module (gnu packages perl)
   #:use-module (gnu packages sqlite)
   #:use-module (gnu packages python)
-  #:use-module (gnu packages python-build)
   #:use-module (gnu packages python-xyz))
 
 (define-public boinc-client
   (package
     (name "boinc-client")
-    (version "8.2.12")
+    (version "8.2.9")
     (source (origin
               (method git-fetch)
               (uri (git-reference
@@ -63,7 +62,7 @@
               (file-name (git-file-name "boinc" version))
               (sha256
                (base32
-                "0531n0yij1gh06xy6plwivbpmhqfq15jizg3rdgri40nz41rzbgr"))))
+                "0ik9423ii6kal29jdn907pxy8w86zpi8n158qx1gcsh8lsaif1v5"))))
     (build-system gnu-build-system)
     (arguments
      (list
@@ -109,11 +108,7 @@ resources).  It supports virtualized, parallel, and GPU-based applications.")
                                      "--with-gtk"
                                      "--with-auth")))
     (native-inputs
-     (list autoconf
+     (list pkg-config autoconf automake which))
-           automake
-           pkg-config
-           python-setuptools
-           which))
     (inputs
      (list avahi
            gtk+

gnu/packages/django.scm

@@ -37,6 +37,7 @@
   #:use-module (guix git-download)
   #:use-module (guix gexp)
   #:use-module (guix build-system pyproject)
+  #:use-module (guix build-system python)
   #:use-module (guix deprecation)
   #:use-module (guix search-paths)
   #:use-module (guix utils)
@@ -200,13 +201,13 @@ your project into different processes.")
 (define-public python-django
   (package
     (name "python-django")
-    (version "5.2.13")
+    (version "5.2.11")
     (source
      (origin
        (method url-fetch)
        (uri (pypi-uri "django" version))
        (sha256
-        (base32 "1i1vlffzhwbzp6r6y8ycvwklc45diy4c6i897z379l48a7dqj5d3"))))
+        (base32 "1lq2dynfw6jmvzrzgfrlij2qnxcksaxgnrfr0pj3bvmrv0m2jbbz"))))
     (build-system pyproject-build-system)
     (arguments
      '(#:test-flags
@@ -297,6 +298,22 @@ to the @dfn{don't repeat yourself} (DRY) principle.")
                       ;; This CVE is fixed in 4.1.9.
                       "CVE-2023-31047"))))))
 
+(define-public python-django-4
+  (package
+    (inherit python-django)
+    (name "python-django-4")
+    (version "4.2.28")
+    (source
+      (origin
+        (method url-fetch)
+        (uri (pypi-uri "django" version))
+        (sha256
+         (base32 "1znc2q1m9p2kxz1rkfkh2hg2sx6i3aqv72zsraad7bci364cvfd4"))))
+    (arguments
+     (substitute-keyword-arguments arguments
+       ((#:phases phases)
+        #~(modify-phases #$phases (delete 'delete-sitecustomize)))))))
+
 (define-public python-django-cache-url
   (package
     (name "python-django-cache-url")
@@ -312,7 +329,7 @@ to the @dfn{don't repeat yourself} (DRY) principle.")
         (base32 "1a5vd07wrnfbclvf6pz9p8ag9kdd1453lsl9q0bkyc45hq2xqd2a"))))
     (build-system pyproject-build-system)
     (native-inputs
-     (list python-django python-pytest python-setuptools))
+     (list python-django python-pytest python-pytest-cov python-setuptools))
     (home-page "https://github.com/epicserve/django-cache-url")
     (synopsis "Configure Django cache settings from URLs")
     (description
@@ -403,6 +420,7 @@ and adapters that are useful for non-trivial configuration scenarios.")
            python-factory-boy
            python-pygments
            python-pytest
+           python-pytest-cov ; runs by default
            python-pytest-django
            python-setuptools
            python-shortuuid
@@ -1311,6 +1329,7 @@ server headers required for Cross-Origin Resource Sharing (CORS).")
            python-mock
            python-msgpack
            python-pytest
+           python-pytest-cov
            python-pytest-django
            python-pytest-mock
            python-setuptools
@@ -2167,6 +2186,7 @@ templates and not in python-level form definitions.")
     (build-system pyproject-build-system)
     (native-inputs
      (list python-pytest
+           python-pytest-cov ; runs by default
            python-pytest-django
            python-setuptools
            python-wheel))

gnu/packages/djvu.scm

@@ -29,6 +29,7 @@
   #:use-module (guix git-download)
   #:use-module (guix build-system gnu)
   #:use-module (guix build-system pyproject)
+  #:use-module (guix build-system python)
   #:use-module (gnu packages autotools)
   #:use-module (gnu packages base)
   #:use-module (gnu packages bash)

gnu/packages/dlang.scm

@@ -10,7 +10,6 @@
 ;;; Copyright © 2022 ( <paren@disroot.org>
 ;;; Copyright © 2022 Esther Flashner <esther@flashner.co.il>
 ;;; Copyright © 2025-2026 Jonas Meeuws <jonas.meeuws@gmail.com>
-;;; Copyright © 2026 Daniel Littlewood <dan@danielittlewood.xyz>
 ;;;
 ;;; This file is part of GNU Guix.
 ;;;
@@ -41,7 +40,6 @@
   #:use-module (gnu packages)
   #:use-module (gnu packages base)
   #:use-module (gnu packages bash)
-  #:use-module (gnu packages build-tools)
   #:use-module (gnu packages check)
   #:use-module (gnu packages compression)
   #:use-module (gnu packages curl)
@@ -49,10 +47,10 @@
   #:use-module (gnu packages gdb)
   #:use-module (gnu packages libedit)
   #:use-module (gnu packages llvm)
+  #:use-module (gnu packages ninja)
   #:use-module (gnu packages perl)
   #:use-module (gnu packages pkg-config)
   #:use-module (gnu packages python)
-  #:use-module (gnu packages python-build)
   #:use-module (gnu packages python-xyz)
   #:use-module (gnu packages textutils)
   #:use-module (gnu packages xorg)
@@ -117,7 +115,6 @@
        ("ldc" ,gdmd)
        ("ninja" ,ninja)
        ("python-wrapper" ,python-wrapper)
-       ("python-setuptools" ,python-setuptools)
        ("tzdata" ,tzdata-for-tests)
        ("unzip" ,unzip)))
     (home-page "http://wiki.dlang.org/LDC")
@@ -323,11 +320,11 @@ integration tests...\n")
                                  "|core.thread.osthread-debug-shared")))
                            (#t `("")))))))))))))
     (native-inputs
-     (modify-inputs native-inputs
+     (append (delete "llvm"
-       (delete "llvm")
+                     (alist-replace "ldc" (list ldc-bootstrap)
-       (replace "ldc" ldc-bootstrap)
+                                    (package-native-inputs ldc-bootstrap)))
-       (append clang-17                 ;propagates llvm and clang-runtime
+         `(("clang" ,clang-17)          ;propagates llvm and clang-runtime
-               python-lit)))
+           ("python-lit" ,python-lit))))
     (properties
      (alist-delete 'hidden? (package-properties ldc-bootstrap)))))
 

gnu/packages/dns.scm

@@ -24,7 +24,7 @@
 ;;; Copyright © 2023 Hilton Chain <hako@ultrarare.space>
 ;;; Copyright © 2023 Janneke Nieuwenhuizen <janneke@gnu.org>
 ;;; Copyright © 2024 John Kehayias <john.kehayias@protonmail.com>
-;;; Copyright © 2024-2026 Ashish SHUKLA <ashish.is@lostca.se>
+;;; Copyright © 2024, 2025 Ashish SHUKLA <ashish.is@lostca.se>
 ;;; Copyright © 2025 Artyom V. Poptsov <poptsov.artyom@gmail.com>
 ;;; Copyright © 2026 Anderson Torres <anderson.torres.8519@gmail.com>
 ;;;
@@ -56,7 +56,7 @@
   #:use-module (gnu packages datastructures)
   #:use-module (gnu packages documentation)
   #:use-module (gnu packages elf)
-  #:use-module (gnu packages compiler-tools)
+  #:use-module (gnu packages flex)
   #:use-module (gnu packages freedesktop)
   #:use-module (gnu packages gcc)
   #:use-module (gnu packages glib)
@@ -115,7 +115,6 @@
        (uri (git-reference
               (url "git://git.chiark.greenend.org.uk/~ianmdlvl/adns.git")
               (commit (string-append "adns-" version))))
-       (file-name (git-file-name name version))
        (sha256
         (base32
          "0ln3l5j7wb1xazrzl76p9xar52p6l2k1cwy7jazxw1acl71k9h5n"))))
@@ -841,14 +840,14 @@ to result in system-wide compromise.")
 (define-public unbound
   (package
     (name "unbound")
-    (version "1.25.1")
+    (version "1.24.2")
     (source
      (origin
        (method url-fetch)
        (uri (string-append "https://www.unbound.net/downloads/unbound-"
                            version ".tar.gz"))
        (sha256
-        (base32 "0vsqmgnq7ibi0b3akzy45nqf0wazmb0bmpk2fp8wyn89gckvds0g"))))
+        (base32 "1nwwwmwazwx40nm88lhh7k1basml2ai6j9q30gnclvca00zbbrs4"))))
     (build-system gnu-build-system)
     (outputs '("out" "python"))
     (native-inputs

gnu/packages/docbook.scm

@@ -53,6 +53,7 @@
   #:use-module (guix build-system copy)
   #:use-module (guix build-system gnu)
   #:use-module (guix build-system pyproject)
+  #:use-module (guix build-system python)
   #:use-module (srfi srfi-26))
 
 ;; The fetch-plan, install-plan and phases for docbook-xml tend to vary
@@ -665,8 +666,7 @@ the in DocBook SGML DTDs.")
                (base32
                 "0yd09nypswy3q4scri1dg7dr99d7gd6r2dwx0xm81l9f4y32gs0n"))
               (patches
-               (search-patches "dblatex-importlib.patch"
+               (search-patches "dblatex-inkscape-1.0.patch"))))
-                               "dblatex-inkscape-1.0.patch"))))
     (outputs '("out" "doc"))
     (build-system pyproject-build-system)
     (arguments

gnu/packages/docker.scm

@@ -39,12 +39,12 @@
   #:use-module (guix build-system cmake)
   #:use-module (guix build-system gnu)
   #:use-module (guix build-system go)
+  #:use-module (guix build-system python)
   #:use-module (guix build-system pyproject)
   #:use-module (guix utils)
   #:use-module (gnu packages autotools)
   #:use-module (gnu packages base)
   #:use-module (gnu packages check)
-  #:use-module (gnu packages containers)
   #:use-module (gnu packages compression)
   #:use-module (gnu packages glib)
   #:use-module (gnu packages golang)
@@ -198,50 +198,6 @@ enforce convention and best practices for metrics collection in Docker
 projects.")
     (license (list license:asl2.0 license:cc-by-sa4.0))))
 
-(define-public go-github-com-moby-policy-helpers
-  (package
-    (name "go-github-com-moby-policy-helpers")
-    (version "0.0.0-20260507153417-a39d60132186")
-    (source
-     (origin
-       (method git-fetch)
-       (uri (git-reference
-              (url "https://github.com/moby/policy-helpers")
-              (commit (go-version->git-ref version))))
-       (file-name (git-file-name name version))
-       (sha256
-        (base32 "12fa602jianip7dg98f2i9i686s2a9bsclw8sqxw1ac1v19qlqr8"))
-       (modules '((guix build utils)))
-       (snippet '(delete-file-recursively "vendor"))))
-    (build-system go-build-system)
-    (arguments
-     (list
-      #:go go-1.25
-      #:embed-files #~(list ".*\\.json")
-      #:import-path "github.com/moby/policy-helpers"))
-    (native-inputs
-     (list go-github-com-stretchr-testify))
-    (propagated-inputs
-     (list go-github-com-containerd-containerd-v2
-           go-github-com-containerd-errdefs
-           go-github-com-containerd-platforms
-           go-github-com-distribution-reference
-           go-github-com-gofrs-flock
-           go-github-com-in-toto-in-toto-golang
-           go-github-com-opencontainers-go-digest
-           go-github-com-opencontainers-image-spec
-           go-github-com-pkg-errors
-           go-github-com-sigstore-protobuf-specs
-           go-github-com-sigstore-sigstore
-           go-github-com-sigstore-sigstore-go
-           go-github-com-theupdateframework-go-tuf-v2
-           go-golang-org-x-sync))
-    (home-page "https://github.com/moby/policy-helpers")
-    (synopsis "Policy helpers for Docker")
-    (description "This package provides a policy helpers for Moby (Docker)
-and BuildKit.  It is a work in progress.")
-    (license license:asl2.0)))
-
 (define-public python-docker
   (package
     (name "python-docker")
@@ -372,26 +328,6 @@ application’s services.  Then, using a single command, the containers are
 created and all the services are started as specified in the configuration.")
     (license license:asl2.0)))
 
-(define-public docker-policy-helper
-  (package/inherit go-github-com-moby-policy-helpers
-    (name "docker-policy-helper")
-    (arguments
-     (substitute-keyword-arguments arguments
-       ((#:import-path _) "github.com/moby/policy-helpers/cmd/policy-helper")
-       ((#:install-source? _ #t) #f)
-       ((#:skip-build? _ #t) #f)
-       ((#:tests? _ #t) #f)
-       ((#:unpack-path _ "") "github.com/moby/policy-helpers")
-       ((#:phases phases '%standard-phases)
-        #~(modify-phases #$phases
-            (add-after 'install 'fix-bin-name
-              (lambda _
-                (rename-file (string-append #$output "/bin/policy-helper")
-                             (string-append #$output "/bin/docker-policy-helper"))))))))
-    (native-inputs (package-propagated-inputs go-github-com-moby-policy-helpers))
-    (propagated-inputs '())
-    (inputs '())))
-
 (define-public python-docker-pycreds
   (package
     (name "python-docker-pycreds")

gnu/packages/documentation.scm

@@ -1,5 +1,5 @@
 ;;; GNU Guix --- Functional package management for GNU
-;;; Copyright © 2014, 2018, 2026 Ludovic Courtès <ludo@gnu.org>
+;;; Copyright © 2014, 2018 Ludovic Courtès <ludo@gnu.org>
 ;;; Copyright © 2014, 2016 Andreas Enge <andreas@enge.fr>
 ;;; Copyright © 2016 Eric Bavier <bavier@member.fsf.org>
 ;;; Copyright © 2016 Roel Janssen <roel@gnu.org>
@@ -41,6 +41,7 @@
   #:use-module (guix build-system cmake)
   #:use-module (guix build-system copy)
   #:use-module (guix build-system perl)
+  #:use-module (guix build-system python)
   #:use-module (guix build-system pyproject)
   #:use-module (guix build-system qt)
   #:use-module (guix deprecation)
@@ -57,7 +58,7 @@
   #:use-module (gnu packages bison)
   #:use-module (gnu packages kde-frameworks)
   #:use-module (gnu packages docbook)
-  #:use-module (gnu packages compiler-tools)
+  #:use-module (gnu packages flex)
   #:use-module (gnu packages ghostscript)
   #:use-module (gnu packages graphviz)
   #:use-module (gnu packages gettext)
@@ -191,20 +192,21 @@ markup) can be customized and extended by the user.")
 
 (define-deprecated asciidoc-py3 asciidoc)
 
-(define-public doxygen-1.16
+(define-public doxygen
   (package
     (name "doxygen")
-    (version "1.16.1")
+    (version "1.14.0")
     (home-page "https://www.doxygen.nl/")
-    (source
+    (source (origin
-     (origin
+              (method url-fetch)
-       (method url-fetch)
+              (uri (list (string-append home-page "files/doxygen-"
-       (uri (list (string-append home-page "files/doxygen-" version
+                                        version ".src.tar.gz")
-                                 ".src.tar.gz")
+                         (string-append "mirror://sourceforge/doxygen/rel-"
-                  (string-append "mirror://sourceforge/doxygen/rel-" version
+                                        version "/doxygen-" version
-                                 "/doxygen-" version ".src.tar.gz")))
+                                        ".src.tar.gz")))
-       (sha256
+              (sha256
-        (base32 "1a33w82ln692qsf3ls0j31f6khljjs1cy3bwd70pra2fa4xy6710"))))
+               (base32
+                "0pbbdvc1zxps6mi58bry16rcrdw6b9gvf9nhv0kp60qkmc8nslyl"))))
     (build-system cmake-build-system)
     (native-inputs
      (list bison
@@ -248,25 +250,6 @@ IDL (Corba, Microsoft, and UNO/OpenOffice flavors), Fortran, VHDL, Tcl,
 and to some extent D.")
     (license license:gpl3+)))
 
-(define-public doxygen-1.14
-  (package
-    (inherit doxygen-1.16)
-    (name "doxygen")
-    (version "1.14.0")
-    (home-page "https://www.doxygen.nl/")
-    (source (origin
-              (method url-fetch)
-              (uri (list (string-append home-page "files/doxygen-"
-                                        version ".src.tar.gz")
-                         (string-append "mirror://sourceforge/doxygen/rel-"
-                                        version "/doxygen-" version
-                                        ".src.tar.gz")))
-              (sha256
-               (base32
-                "0pbbdvc1zxps6mi58bry16rcrdw6b9gvf9nhv0kp60qkmc8nslyl"))))))
-
-(define-public doxygen doxygen-1.14)
-
 (define-public halibut
   (package
     (name "halibut")
@@ -489,8 +472,9 @@ inspired by Dash.")
     (build-system gnu-build-system)
     (arguments
      (list
-      ;; Custom build steps to prevent using pyproject-build-system which
+      ;; Essentially a lighter copy of the former python-build-system.
-      ;; allows to edit the latter without a texlive + haskell world rebuild.
+      ;; Using it rather than pyproject-build-system allows to edit the latter
+      ;; without a texlive + haskell world rebuild.
       #:phases
       #~(modify-phases %standard-phases
           (delete 'bootstrap)

gnu/packages/dotnet.scm

@@ -29,7 +29,7 @@
   #:use-module (gnu packages compression)
   #:use-module (gnu packages curl)
   #:use-module (gnu packages databases)
-  #:use-module (gnu packages compiler-tools)
+  #:use-module (gnu packages flex)
   #:use-module (gnu packages gettext)
   #:use-module (gnu packages pkg-config)
   #:use-module (gnu packages base)
@@ -62,6 +62,7 @@
   #:use-module (guix utils)
   #:use-module (guix build-system cmake)
   #:use-module (guix build-system gnu)
+  #:use-module (guix build-system python)
   #:use-module (ice-9 match))
 
 (define-public treecc

gnu/packages/duckdb.scm

@@ -25,6 +25,7 @@
   #:use-module ((guix licenses) #:prefix license:)
   #:use-module (guix build-system cmake)
   #:use-module (guix build-system pyproject)
+  #:use-module ((guix build-system python) #:select (pypi-uri))
   #:use-module (guix build-system r)
   #:use-module (guix download)
   #:use-module (guix gexp)
@@ -147,13 +148,13 @@ system.")
 (define-public r-duckdb
   (package
     (name "r-duckdb")
-    (version "1.5.2")
+    (version "1.5.1")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "duckdb" version))
        (sha256
-        (base32 "1dldlfwvc33czvlxfmwaj4p9y6sjjj5iqy98yda47a8kclrqmyam"))
+        (base32 "177621m08whqqk4yhj3zrr08l3d9hhlqh3gm9jzhi5cplg47cksq"))
        ;; This package bundles the duckdb sources and builds a custom variant
        ;; of duckdb.  I'd be happy to link it with our duckdb library instead,
        ;; but it does not seem possible to do that.

gnu/packages/ebook.scm

@@ -40,6 +40,7 @@
   #:use-module (guix build-system gnu)
   #:use-module (guix build-system meson)
   #:use-module (guix build-system pyproject)
+  #:use-module (guix build-system python)
   #:use-module (guix build-system qt)
   #:use-module (gnu packages)
   #:use-module (gnu packages autotools)
@@ -206,7 +207,7 @@ with Microsoft Compiled HTML (CHM) files.")
            python-css-parser
            python-cssselect
            python-dateutil
-           python-dnspython
+           python-dnspython-1.16
            python-feedparser
            python-fonttools
            python-html2text
@@ -282,9 +283,7 @@ tags = [\"WS_X11\"]")
                  (string-append "[tool.sip.project]
 sip-include-dirs = [\""
                    #$(this-package-input "python-pyqt")
-                   "/lib/python"
+                   "/lib/python3.11/site-packages/PyQt6/bindings\"]")))
-                   #$(version-major+minor (package-version python))
-                   "/site-packages/PyQt6/bindings\"]")))
               (substitute* "src/calibre/ebooks/pdf/pdftohtml.py"
                 (("PDFTOHTML = 'pdftohtml'")
                  (string-append "PDFTOHTML = \""
@@ -416,43 +415,6 @@ e-books for convenient reading.")
 accessing and converting various ebook file formats.")
     (license license:expat)))
 
-(define-public epub-thumbnailer
-  ;; See: <https://github.com/marianosimone/epub-thumbnailer/issues/46>.
-  (let ((commit "de4b5bf0fcd1817d560f180231f7bd22d330f1be")
-        (revision "0"))
-    (package
-      (name "epub-thumbnailer")
-      (version (git-version "0.0.0" revision commit))
-      (home-page "https://github.com/marianosimone/epub-thumbnailer")
-      (source
-       (origin
-         (method git-fetch)
-         (uri (git-reference
-                (url home-page)
-                (commit commit)))
-         (file-name (git-file-name name version))
-         (sha256
-          (base32 "1bkknrcds67qkgci6kdkv51fz8hzmqg8z1vkkni4jl4vgix7cjxg"))))
-      (build-system pyproject-build-system)
-      (arguments
-       (list
-        #:tests? #f     ;no tests provided
-        #:phases
-        #~(modify-phases %standard-phases
-            (add-after 'strip 'rename-program
-              (lambda _
-                (with-directory-excursion #$output
-                  (rename-file "bin/epub-thumbnailer.py"
-                               "bin/epub-thumbnailer")))))))
-      (propagated-inputs (list python-pillow))
-      (native-inputs (list python-setuptools))
-      (synopsis
-       "Extract the cover of an epub book and create a thumbnail for it")
-      (description
-       "@code{epub-thumbnailer} is a simple script that tries to find a cover
-into an epub file and creates a thumbnail for it.")
-      (license license:gpl3))))
-
 (define-public inkbox
   (package
     (name "inkbox")