gnu: r-spatstat-random: Update to 3.5-0.

* gnu/packages/cran.scm (r-spatstat-random): Update to 3.5-0.
[propagated-inputs]: Add r-matrix and r-spatstat-sparse.

Change-Id: I795740f5ca38cd3b4b7f52a0a46965253ed81885

CODEOWNERS

@@ -292,12 +292,12 @@ guix/build-system/julia\.scm                       @guix/julia
 
 gnu/packages/(kde)(-.+|)\.scm$                     @guix/kde
 
-gnu/build/linux-modules\.scm                       @guix/linux-libre
-gnu/packages/aux-files/linux-libre.*$              @guix/linux-libre
-gnu/packages/linux\.scm                            @guix/linux-libre
-gnu/tests/linux-modules\.scm                       @guix/linux-libre
-guix/build/linux-module-build-system\.scm          @guix/linux-libre
-guix/build-system/linux-module\.scm                @guix/linux-libre
+gnu/build/linux-modules\.scm                       @guix/kernel
+gnu/packages/aux-files/linux-libre.*$              @guix/kernel
+gnu/packages/linux\.scm                            @guix/kernel
+gnu/tests/linux-modules\.scm                       @guix/kernel
+guix/build/linux-module-build-system\.scm          @guix/kernel
+guix/build-system/linux-module\.scm                @guix/kernel
 
 gnu/packages/lisp(-.+|)\.scm$                      @guix/lisp
 guix/build/asdf-build-system\.scm                  @guix/lisp

etc/teams.scm

@@ -876,8 +876,8 @@ and the maven-build-system."
         "The plasma desktop environment, and KDE Applications."
         #:scope (list (make-regexp* "^gnu/packages/(kde)(-.+|)\\.scm$"))))
 
-(define-team linux-libre
-  (team 'linux-libre
+(define-team kernel
+  (team 'kernel
         #:name "Linux-libre kernel team"
         #:scope (list "gnu/build/linux-modules.scm"
                       (make-regexp* "^gnu/packages/aux-files/linux-libre.*$")
@@ -1298,7 +1298,7 @@ the \"texlive\" importer."
 (define-member (person "Leo Famulari"
                        "leo@famulari.name"
                        "lfam")
-  linux-libre)
+  kernel)
 
 (define-member (person "Efraim Flashner"
                        "efraim@flashner.co.il"
@@ -1383,7 +1383,7 @@ the \"texlive\" importer."
 (define-member (person "Vagrant Cascadian"
                        "vagrant@debian.org"
                        "vagrantc")
-  debian embedded linux-libre)
+  debian embedded kernel)
 
 (define-member (person "Vagrant Cascadian"        ;XXX: duplicate
                        "vagrant@reproducible-builds.org"
@@ -1537,7 +1537,7 @@ the \"texlive\" importer."
 (define-member (person "Rodion Goritskov"
                        "rodion@goritskov.com"
                        "rodion-goritskov")
-  games java kde linux-libre release)
+  games java kde kernel release)
 
 (define-member (person "Jason Conroy"
                        "jconroy@tscripta.net"
@@ -1622,7 +1622,7 @@ the \"texlive\" importer."
 (define-member (person "Wilko Meyer"
                        "w@wmeyer.eu"
                        "theesm")
-  linux-libre perl)
+  kernel perl)
 
 (define-member (person "Untrusem"
                        "mysticmoksh@riseup.net"

gnu/packages/cran.scm

@@ -746,13 +746,13 @@ distribution).")
 (define-public r-bigassertr
   (package
     (name "r-bigassertr")
-    (version "0.1.7")
+    (version "0.2.0")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "bigassertr" version))
        (sha256
-        (base32 "0py8nr937ddi6c7r2bcqrpvqkh1mhmk5ylnrmqlahawnwmpksm6g"))))
+        (base32 "037shjim8syqfc563i6fs0slkdrmfp3pjfy15kfxr5jdk8yvyka3"))))
     (properties `((upstream-name . "bigassertr")))
     (build-system r-build-system)
     (native-inputs (list r-testthat))
@@ -1452,13 +1452,13 @@ Companion to Applied Regression, Third Edition, Sage.")
 (define-public r-cards
   (package
     (name "r-cards")
-    (version "0.7.1")
+    (version "0.8.0")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "cards" version))
        (sha256
-        (base32 "1fd5g5pvasxfg49fs6khrlaj19z56xsf4m4yjh2vwwm86f87ksff"))))
+        (base32 "06r9n0cf884z22xflbcxrvmfil4xym13fa3kx0sh7jqkk4232vh7"))))
     (properties
      `((upstream-name . "cards")
        ;; Do not create dependency cycle.
@@ -1937,6 +1937,37 @@ data is given, then a Gaussian process is fit to the data and used to create
 the contour plot.")
     (license license:gpl3)))
 
+(define-public r-corrr
+  (package
+    (name "r-corrr")
+    (version "0.4.5")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (cran-uri "corrr" version))
+       (sha256
+        (base32 "06pi4an3a5d66rqxvmk859scpq6m4yrhy9q5icbh95fvhpaqfr1q"))))
+    (properties `((upstream-name . "corrr")))
+    (build-system r-build-system)
+    (propagated-inputs (list r-dplyr
+                             r-ggplot2
+                             r-ggrepel
+                             r-glue
+                             r-purrr
+                             r-rlang
+                             r-seriation
+                             r-tibble))
+    (native-inputs (list r-knitr r-testthat))
+    (home-page "https://github.com/tidymodels/corrr")
+    (synopsis "Correlations in R")
+    (description
+     "This package provides a tool for exploring correlations.  It makes it
+possible to easily perform routine tasks when exploring correlation matrices
+such as ignoring the diagonal, focusing on the correlations of certain
+variables against others, or rearranging and visualizing the matrix in terms
+of the strength of the correlations.")
+    (license license:expat)))
+
 (define-public r-celestial
   (package
     (name "r-celestial")
@@ -5000,14 +5031,14 @@ including:
 (define-public r-gdtools
   (package
     (name "r-gdtools")
-    (version "0.5.0")
+    (version "0.5.1")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "gdtools" version))
        (sha256
         (base32
-         "15gklyln0260q1jbpx5n2kr472dv3ij3qw7298hciflf0q80isdf"))))
+         "1rs18kf34iihiypmdc6w56wqqnm0k056jz9vhvg86ypszha51hcl"))))
     (build-system r-build-system)
     (arguments
      (list
@@ -8405,13 +8436,13 @@ estimation and robust multivariate analysis with high breakdown point.")
 (define-public r-rsqlite
   (package
     (name "r-rsqlite")
-    (version "3.52.0")
+    (version "3.53.1")
     (source (origin
               (method url-fetch)
               (uri (cran-uri "RSQLite" version))
               (sha256
                (base32
-                "02cqx38nayr0qkbbnvmcfaxgz2clr7jb0c8zskd0k7zvsafsqqyz"))))
+                "0ykbl94n1k61kqmdr1dfj1sq4sy8igzq95hrll7yhp4kdl7j8wqg"))))
     (properties
      '((upstream-name . "RSQLite")
        ;; These are not strictly necessary for running tests and adding them
@@ -9961,14 +9992,14 @@ wind-roses and Walter&Lieth climate diagrams are included.")
 (define-public r-clipr
   (package
     (name "r-clipr")
-    (version "0.8.0")
+    (version "0.8.1")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "clipr" version))
        (sha256
         (base32
-         "1s9vvv3cxnz8w11gsi8z9ddv9jzib5qf5qqxnwqrrv7vj8cr7hij"))))
+         "1dpiqga6nl67q39qgx2zkdl29fchq0vx14fyx163z8vx72f7ms06"))))
     (build-system r-build-system)
     (native-inputs
      (list r-knitr r-testthat))
@@ -11519,6 +11550,42 @@ server address by means of rules (@code{Rule} class).  The
 cases and the content.")
     (license license:agpl3)))
 
+(define-public r-scrutiny
+  (package
+    (name "r-scrutiny")
+    (version "0.6.1")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (cran-uri "scrutiny" version))
+       (sha256
+        (base32 "0wqrbzkm4fw556ds8bzpgimy2xs1v7da54cam5bmcvp0yhglx8h6"))))
+    (properties `((upstream-name . "scrutiny")))
+    (build-system r-build-system)
+    (propagated-inputs (list r-cli
+                             r-corrr
+                             r-dplyr
+                             r-ggplot2
+                             r-ggrepel
+                             r-glue
+                             r-lifecycle
+                             r-magrittr
+                             r-purrr
+                             r-rlang
+                             r-stringr
+                             r-tibble
+                             r-tidyr
+                             r-tidyselect))
+    (native-inputs (list r-knitr r-testthat))
+    (home-page "https://lhdjung.github.io/scrutiny/")
+    (synopsis "Error detection in science")
+    (description
+     "The goal of scrutiny is to test published summary statistics for
+consistency using techniques like GRIM and to check their plausibility.  The
+package makes these methods easy to use in a tidyverse-friendly way.  It hopes
+to help the new field of error detection go mainstream.")
+    (license license:expat)))
+
 (define-public r-sendmailr
   (package
     (name "r-sendmailr")
@@ -12862,13 +12929,13 @@ master-slave parallelisation or a coarse-grain islands approach.")
 (define-public r-gap
   (package
     (name "r-gap")
-    (version "1.14")
+    (version "1.15.2")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "gap" version))
        (sha256
-        (base32 "17ryk3x4286ddws8kr18br1ff5bi7w9v0rd6kpyxxyl3ysgny44v"))))
+        (base32 "1xhpcvljzyd62iqchsh8z4n9vv7pdzh9rr7cz7s3cffl492mbbia"))))
     (properties `((upstream-name . "gap")))
     (build-system r-build-system)
     (propagated-inputs (list r-dplyr r-gap-datasets r-ggplot2 r-plotly
@@ -13511,14 +13578,16 @@ effect (co)variances, and residual variance.")
 (define-public r-mets
   (package
     (name "r-mets")
-    (version "1.3.9")
+    (version "1.3.10")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "mets" version))
        (sha256
-        (base32 "0albfa5njy20iv59s5a90csm2sgrhbjl58mjhmf4c1mr476r9w02"))))
-    (properties `((upstream-name . "mets")))
+        (base32 "1j7zkyik4dlfgvjr5a4hh58vmx77w34g0d77n68isa83j84l3lhb"))))
+    (properties
+     '((upstream-name . "mets")
+       (updater-extra-native-inputs . ("r-prodlim"))))
     (build-system r-build-system)
     (arguments
      (list
@@ -14041,14 +14110,14 @@ Analysis Approach Using R.  Chapman-Hall, 2019,
 (define-public r-vegan
   (package
     (name "r-vegan")
-    (version "2.7-3")
+    (version "2.7-5")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "vegan" version))
        (sha256
         (base32
-         "0wh72b8sa1x94b6m4kwd78274y0laf4ccfhsw4jzp2zkx1s1zk0z"))))
+         "1qiczbgnz96nyvvlnmnci4w280g4khwkpsznxqgb6143da4vzmxx"))))
     (build-system r-build-system)
     (native-inputs
      (list gfortran r-compositions r-knitr))
@@ -20350,13 +20419,13 @@ provides an interactive R manager and worker environment.")
 (define-public r-rmumps
   (package
     (name "r-rmumps")
-    (version "5.2.1-41")
+    (version "5.2.1-42")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "rmumps" version))
        (sha256
-        (base32 "18irfcv23wvqba1ssz5b0y2z2cg0a0yi2n3kvikdibcirg97m1yy"))))
+        (base32 "0rxc43b4xvqzq6hc1rna8c0f8lnvwl0vl05bnbzkps3pfjh529q0"))))
     (properties
      `((upstream-name . "rmumps")
        (updater-extra-inputs . ("zlib"))))
@@ -32817,14 +32886,14 @@ data using:
 (define-public r-bayestestr
   (package
     (name "r-bayestestr")
-    (version "0.18.0")
+    (version "0.18.1")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "bayestestR" version))
        (sha256
         (base32
-         "1zw28k10jawrp1yvvcm89v7qgv86l6xka74dg2lhw1lq3mmrgy0l"))))
+         "1zcbppwlzbibyjv4n4vx8c3k6hqk05bdl46fai3zslv8g5a9asfy"))))
     (properties
      '((upstream-name . "bayestestR")
        (updater-extra-native-inputs . ("r-logspline"))
@@ -34099,14 +34168,14 @@ This package provides an R interface.")
 (define-public r-rcpphnsw
   (package
     (name "r-rcpphnsw")
-    (version "0.6.0")
+    (version "0.7.0")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "RcppHNSW" version))
        (sha256
         (base32
-         "03sqzz1993jsjm5vpyd1n1fpsrdfrky6dpv7m9ialhs1m00fv9m5"))))
+         "0k5czg85sb4wda0l39b7r2nsvsyr0xvhpz1maynzbrzrk5c7hr41"))))
     (properties `((upstream-name . "RcppHNSW")))
     (build-system r-build-system)
     (propagated-inputs (list r-rcpp))
@@ -38016,18 +38085,19 @@ algorithms) can be computed and partitioned matrices can be plotted.")
 (define-public r-upsetr
   (package
     (name "r-upsetr")
-    (version "1.4.0")
+    (version "1.4.1")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "UpSetR" version))
        (sha256
         (base32
-         "007i0njnjjy7vbrxabwav7a1kk2n0hn2mkvqsdzzfk10ckp5y7im"))))
+         "17jliva42j2gyr1ga18flh0kvxs6m19dfngiaygg5jnwnpxzvhci"))))
     (properties `((upstream-name . "UpSetR")))
     (build-system r-build-system)
     (propagated-inputs
      (list r-ggplot2 r-gridextra r-plyr r-scales))
+    (native-inputs (list r-knitr))
     (home-page "https://github.com/hms-dbmi/UpSetR")
     (synopsis "Visualize intersecting sets")
     (description
@@ -44342,14 +44412,14 @@ in pipelines.")
 (define-public r-parameters
   (package
     (name "r-parameters")
-    (version "0.29.0")
+    (version "0.29.1")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "parameters" version))
        (sha256
         (base32
-         "1x9ynip55p6dyp2bsb3gbm4hs8amji7wkzqvr3qws5lk57xkj6s5"))))
+         "0w1lcni0lvdqhg9rms6f3skzwirigylq1353ciffiqsyi1f0qr2z"))))
     (properties `((upstream-name . "parameters")))
     (build-system r-build-system)
     (propagated-inputs
@@ -46270,16 +46340,16 @@ classes into dummy/indicator variables.")
 (define-public r-dunn-test
   (package
     (name "r-dunn-test")
-    (version "1.3.7")
+    (version "1.4.0")
     (source (origin
               (method url-fetch)
               (uri (cran-uri "dunn.test" version))
               (sha256
                (base32
-                "11clwqd6a2p9qc3xd61fylaif5x8w3vnz06z0s4vai50nfxqzxzd"))))
+                "1jqsz4dbmdkqrgxpv5d9l7caj2qsvhpbc41h5l4ggqn8qprs7xvh"))))
     (properties `((upstream-name . "dunn.test")))
     (build-system r-build-system)
-    (propagated-inputs (list r-rlang))
+    (propagated-inputs (list r-rlang r-scrutiny))
     (home-page "https://cran.r-project.org/package=dunn.test")
     (synopsis "Dunn's test of multiple comparisons using rank sums")
     (description
@@ -51972,13 +52042,13 @@ diagonals.  This package allows you to compute the tensor product of arrays.")
 (define-public r-spatstat-explore
   (package
     (name "r-spatstat-explore")
-    (version "3.8-0")
+    (version "3.8-1")
     (source (origin
               (method url-fetch)
               (uri (cran-uri "spatstat.explore" version))
               (sha256
                (base32
-                "1vdicrrjig4shgb2jillyq7dj4a489h3clnxjsrv3zldx9lp8abg"))))
+                "03bxys12wg5gcn7rps2ycb9l0bqrll007r0icvqw1wk309zyr96x"))))
     (properties `((upstream-name . "spatstat.explore")))
     (build-system r-build-system)
     (propagated-inputs
@@ -52149,14 +52219,14 @@ package.")
 (define-public r-spatstat-geom
   (package
     (name "r-spatstat-geom")
-    (version "3.7-3")
+    (version "3.8-1")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "spatstat.geom" version))
        (sha256
         (base32
-         "1gpwxjq4ak205k85g9w614d4k5rclkxya0wxkc53pfrq6v01lfxg"))))
+         "1cs1g3nx5yhp4cgz53ib9n1nki4b2xkpgin4bc1n5ah6r1b5v8r8"))))
     (properties `((upstream-name . "spatstat.geom")))
     (build-system r-build-system)
     (propagated-inputs
@@ -52204,16 +52274,20 @@ for spatial data on a linear network.")
 (define-public r-spatstat-random
   (package
     (name "r-spatstat-random")
-    (version "3.4-5")
+    (version "3.5-0")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "spatstat.random" version))
        (sha256
-        (base32 "0lky2h15n8zbrz5m7m4ik8gkp0fhdgyr17ys4vnn6xa6f3gibr89"))))
+        (base32 "1k8y1pxf2f7h06akyia0my4q4ici4q5rmh89vj1k0n345ca0x0xk"))))
     (properties `((upstream-name . "spatstat.random")))
     (build-system r-build-system)
-    (propagated-inputs (list r-spatstat-data r-spatstat-geom r-spatstat-univar
+    (propagated-inputs (list r-matrix
+                             r-spatstat-data
+                             r-spatstat-geom
+                             r-spatstat-sparse
+                             r-spatstat-univar
                              r-spatstat-utils))
     (home-page "https://spatstat.org/")
     (synopsis "Random Generation Functionality for the 'spatstat' Family")

gnu/packages/django.scm

@@ -105,7 +105,7 @@ prefixing to determine WebSocket endpoints versus HTTP endpoints.")
 (define-public python-channels
   (package
     (name "python-channels")
-    (version "4.3.2")
+    (version "4.2.2")
     (source
      (origin
        (method git-fetch) ; no tests in PyPI
@@ -114,14 +114,8 @@ prefixing to determine WebSocket endpoints versus HTTP endpoints.")
              (commit version)))
        (file-name (git-file-name name version))
        (sha256
-        (base32 "0lxq5l0729ms4xzbn1rq968qpi7ipa9aj1wjvzrpdxd3mmlg2618"))))
+        (base32 "0x7w29qpj2acrzf8hcgymsyr5gk3aj2wkbvlwcr01ygd6as8h7hz"))))
     (build-system pyproject-build-system)
-    (arguments
-     '(#:phases
-       (modify-phases %standard-phases
-         (add-before 'check 'delete-selenium-tests
-           (lambda* _
-             (delete-file "tests/sample_project/tests/test_selenium.py"))))))
     (propagated-inputs (list python-asgiref python-django))
     ;; Channels develops and maintains Daphne but any other ASGI server can be
     ;; used, so keep it in native-inputs for tests.
@@ -206,13 +200,13 @@ your project into different processes.")
 (define-public python-django
   (package
     (name "python-django")
-    (version "6.0.5")
+    (version "5.2.13")
     (source
      (origin
        (method url-fetch)
        (uri (pypi-uri "django" version))
        (sha256
-        (base32 "0saj5w1pmfl2bf6smmbx2h8v6b9n9djdsbp46v468a4ax5r6hvdw"))))
+        (base32 "1i1vlffzhwbzp6r6y8ycvwklc45diy4c6i897z379l48a7dqj5d3"))))
     (build-system pyproject-build-system)
     (arguments
      '(#:test-flags
@@ -380,27 +374,28 @@ and adapters that are useful for non-trivial configuration scenarios.")
 (define-public python-django-extensions
   (package
     (name "python-django-extensions")
-    (properties '((commit . "32ddfb0499bec7f39f9fbb44568d2781cecd1f32")
-                  (revision . "0")))
-    (version (git-version "4.1"
-                          (assoc-ref properties 'revision)
-                          (assoc-ref properties 'commit)))
+    (version "4.1")
     (source
      (origin
        (method git-fetch)
        ;; Fetch from the git repository, so that the tests can be run.
        (uri (git-reference
              (url "https://github.com/django-extensions/django-extensions")
-             (commit (assoc-ref properties 'commit))))
+             (commit version)))
        (file-name (string-append name "-" version))
        (sha256
-        (base32 "09gk82rsmqgaz4pqk0xvb4mgfprls8h1wm24p74d0ykdi7li2plg"))))
+        (base32 "1qayan9za7ylvzkwp6p0l0735gavnzd1kdjsfc178smq6xnby0ss"))))
     (build-system pyproject-build-system)
     (arguments
      (list
       ;; The 5 tests in test_dumbscript.py fail (OperationalError).
       #:test-flags
-      #~(list "--ignore" "tests/test_dumpscript.py")))
+      #~(list "--ignore" "tests/test_dumpscript.py"
+              "-k" (string-append
+                    ;; These fail for unknown reasons.
+                    "not test_do_export_emails_format_vcard_start"
+                    " and not test_initialize_runserver_plus"
+                    " and not test_should_highlight_python_syntax_with_name"))))
     (propagated-inputs
      (list python-django))
     (native-inputs
@@ -411,8 +406,6 @@ and adapters that are useful for non-trivial configuration scenarios.")
            python-pytest-django
            python-setuptools
            python-shortuuid
-           python-vobject
-           python-werkzeug
            tzdata-for-tests))
     (home-page "https://github.com/django-extensions/django-extensions")
     (synopsis "Custom management extensions for Django")

gnu/packages/fonts.scm

@@ -4287,7 +4287,7 @@ typographical palette.")
 (define-public font-mona-sans
   (package
     (name "font-mona-sans")
-    (version "2.0.27")
+    (version "2.0.26")
     (source
      (origin
        (method git-fetch)
@@ -4297,7 +4297,7 @@ typographical palette.")
        (file-name (git-file-name name version))
        (sha256
         (base32
-         "10xbs857d21zrfx0cpzcsyyk76j921qq68qpz5r2kl4jr3gz541z"))))
+         "09b6apxq659y4dkkm5swy683q6hviibv1cd48ragm5rd1376hsaz"))))
     (build-system font-build-system)
     (outputs '("out" "ttf" "woff"))
     (home-page "https://github.com/mona-sans")

gnu/packages/golang-check.scm

@@ -2151,57 +2151,6 @@ testing and improve the efficiency of unit test writing.")
 testing of time-sensitive code.")
     (license license:expat)))
 
-(define-public go-github-com-josharian-mapfs
-  (package
-    (name "go-github-com-josharian-mapfs")
-    (version "0.0.0-20210615234106-095c008854e6")
-    (source
-     (origin
-       (method git-fetch)
-       (uri (git-reference
-             (url "https://github.com/josharian/mapfs")
-             (commit (go-version->git-ref version))))
-       (file-name (git-file-name name version))
-       (sha256
-        (base32 "09i6shqwacx8nm6jfyhc1zvry8fcb3ddd98m96skzybv9lckq7h4"))))
-    (build-system go-build-system)
-    (arguments
-     (list
-      #:import-path "github.com/josharian/mapfs"))
-    (home-page "https://github.com/josharian/mapfs")
-    (synopsis "Fork of Go std's testing/fstest.MapFS")
-    (description
-     "This is a fork of the @code{MapFS} component of the Go standard
-library's testing/fstest package.")
-    (license license:bsd-3)))
-
-(define-public go-github-com-josharian-txtarfs
-  (package
-    (name "go-github-com-josharian-txtarfs")
-    (version "0.0.0-20240408113805-5dc76b8fe6bf")
-    (source
-     (origin
-       (method git-fetch)
-       (uri (git-reference
-              (url "https://github.com/josharian/txtarfs")
-              (commit (go-version->git-ref version))))
-       (file-name (git-file-name name version))
-       (sha256
-        (base32 "129rf6hviw46rxcnnkc8jb1k579798rrhnh1k3nn7npi260ia44m"))))
-    (build-system go-build-system)
-    (arguments
-     (list
-      #:import-path "github.com/josharian/txtarfs"))
-    (propagated-inputs
-     (list go-github-com-josharian-mapfs
-           go-golang-org-x-tools))
-    (home-page "https://github.com/josharian/txtarfs")
-    (synopsis "Convert a txtar to an io.FS")
-    (description
-     "This package turns a @url{https://pkg.go.dev/golang.org/x/tools/txtar,
- txtar} into an @url{https://pkg.go.dev/io/fs, fs.FS}.")
-    (license license:expat)))
-
 (define-public go-github-com-joshdk-go-junit
   (package
     (name "go-github-com-joshdk-go-junit")
@@ -2713,56 +2662,6 @@ error messages, preserving the order of @code{have} (actual result) before
 @code{want} (expected result) to minimize confusion.")
     (license license:asl2.0)))
 
-(define-public go-github-com-newmo-oss-go-caller
-  (package
-    (name "go-github-com-newmo-oss-go-caller")
-    (version "0.1.0")
-    (source
-     (origin
-       (method git-fetch)
-       (uri (git-reference
-              (url "https://github.com/newmo-oss/go-caller")
-              (commit (string-append "v" version))))
-       (file-name (git-file-name name version))
-       (sha256
-        (base32 "1hn0wj2v6yvn83lpilbcb9xpa36fmcbv83rk6fhr2rwckp2dxy8p"))))
-    (build-system go-build-system)
-    (arguments
-     (list
-      #:import-path "github.com/newmo-oss/go-caller"))
-    (native-inputs
-     (list go-github-com-google-go-cmp))
-    (home-page "https://github.com/newmo-oss/go-caller")
-    (synopsis "Collect stack traces at runtime")
-    (description
-     "This package provides a library for collecting stack traces at runtime.")
-    (license license:expat)))
-
-(define-public go-github-com-newmo-oss-gotestingmock
-  (package
-    (name "go-github-com-newmo-oss-gotestingmock")
-    (version "0.2.0")
-    (source
-     (origin
-       (method git-fetch)
-       (uri (git-reference
-              (url "https://github.com/newmo-oss/gotestingmock")
-              (commit (string-append "v" version))))
-       (file-name (git-file-name name version))
-       (sha256
-        (base32 "1flgmarj961k4vl6d7i2740snrdfjiv4aigb87v5aznvi8bwa5d3"))))
-    (build-system go-build-system)
-    (arguments
-     (list
-      #:import-path "github.com/newmo-oss/gotestingmock"))
-    (propagated-inputs
-     (list go-github-com-newmo-oss-go-caller))
-    (home-page "https://github.com/newmo-oss/gotestingmock")
-    (synopsis "Mocking utilities for Go")
-    (description
-     "This package provides mocking utilities for unit tests in Go.")
-    (license license:expat)))
-
 (define-public go-github-com-onsi-ginkgo
   (package
     (name "go-github-com-onsi-ginkgo")
@@ -3368,84 +3267,6 @@ and CLI tool.")
 such as readers and writers that fail after N consecutive reads/writes.")
     (license license:expat)))
 
-(define-public go-github-com-tenntenn-golden
-  (package
-    (name "go-github-com-tenntenn-golden")
-    (version "0.5.5")
-    (source
-     (origin
-       (method git-fetch)
-       (uri (git-reference
-              (url "https://github.com/tenntenn/golden")
-              (commit (string-append "v" version))))
-       (file-name (git-file-name name version))
-       (sha256
-        (base32 "09w3h7c4z930z91dg7bfs9m680pw9zgqyyikw88gisv1z86y3qlz"))))
-    (build-system go-build-system)
-    (arguments
-     (list
-      #:import-path "github.com/tenntenn/golden"))
-    (native-inputs
-     (list go-github-com-google-go-cmp))
-    (propagated-inputs
-     (list go-github-com-josharian-txtarfs
-           go-golang-org-x-tools))
-    (home-page "https://github.com/tenntenn/golden")
-    (synopsis "Utilities for golden file tests")
-    (description "This package provides utilities for golden file tests.")
-    (license license:expat)))
-
-(define-public go-github-com-tenntenn-modver
-  (package
-    (name "go-github-com-tenntenn-modver")
-    (version "1.0.1")
-    (source
-     (origin
-       (method git-fetch)
-       (uri (git-reference
-              (url "https://github.com/tenntenn/modver")
-              (commit (string-append "v" version))))
-       (file-name (git-file-name name version))
-       (sha256
-        (base32 "1p4402lizz5ny0l49yxa65ryhx09wm8g13lx4pw0nw0s4r06rw3g"))))
-    (build-system go-build-system)
-    (arguments
-     (list
-      #:import-path "github.com/tenntenn/modver"))
-    (native-inputs
-     (list go-github-com-google-go-cmp))
-    (propagated-inputs
-     (list go-github-com-hashicorp-go-version))
-    (home-page "https://github.com/tenntenn/modver")
-    (synopsis "Utility for Go modules")
-    (description "This package provides utilities for Go modules.")
-    (license license:expat)))
-
-(define-public go-github-com-tenntenn-text-transform
-  (package
-    (name "go-github-com-tenntenn-text-transform")
-    (version "0.0.0-20250402111347-ba836492e880")
-    (source
-     (origin
-       (method git-fetch)
-       (uri (git-reference
-              (url "https://github.com/tenntenn/text")
-              (commit (go-version->git-ref version))))
-       (file-name (git-file-name name version))
-       (sha256
-        (base32 "19f302js8pxyqnl189992zp6pl169b4gpgn6wywpdir77vm56pih"))))
-    (build-system go-build-system)
-    (arguments
-     (list
-      #:import-path "github.com/tenntenn/text/transform"
-      #:unpack-path "github.com/tenntenn/text"))
-    (propagated-inputs
-     (list go-golang-org-x-text))
-    (home-page "https://github.com/tenntenn/text")
-    (synopsis "Text transformation utilities")
-    (description "This package provides text transformation utilities in Go.")
-    (license license:expat)))
-
 (define-public go-github-com-tj-assert
   (package
     (name "go-github-com-tj-assert")
@@ -3728,34 +3549,6 @@ goroutine leaks and understanding goroutine lifecycles.")
 based on Go @code{testing} library procedures.")
     (license license:cc0)))
 
-(define-public go-gitlab-com-bosi-decorder
-  (package
-    (name "go-gitlab-com-bosi-decorder")
-    (version "0.4.2")
-    (source
-     (origin
-       (method git-fetch)
-       (uri (git-reference
-              (url "https://gitlab.com/bosi/decorder")
-              (commit (string-append "v" version))))
-       (file-name (git-file-name name version))
-       (sha256
-        (base32 "0g9x5f7mhvdzwki57902qgb4ih2gipkg255nf9hjv30flfnl2294"))))
-    (build-system go-build-system)
-    (arguments
-     (list
-      #:import-path "gitlab.com/bosi/decorder"
-      #:test-flags #~(list "-vet=off")))
-    (propagated-inputs
-     (list go-golang-org-x-tools))
-    (home-page "https://gitlab.com/bosi/decorder")
-    (synopsis "Declaration order and number linter for golang")
-    (description
-     "This package provides a declaration order linter for Go.  In case of
-this tool declarations are @code{type}, @code{const}, @code{var} and
-@code{func}.")
-    (license license:expat)))
-
 (define-public go-go-abhg-dev-requiredfield
   (package
     (name "go-go-abhg-dev-requiredfield")
@@ -3864,60 +3657,6 @@ and restore them afterwards.")
 of @url{https://github.com/wadey/gocovmerge}.")
     (license license:bsd-2)))
 
-(define-public go-go-simpler-org-assert
-  (package
-    (name "go-go-simpler-org-assert")
-    (version "0.9.0")
-    (source
-     (origin
-       (method git-fetch)
-       (uri (git-reference
-              (url "https://github.com/go-simpler/assert")
-              (commit (string-append "v" version))))
-       (file-name (git-file-name name version))
-       (sha256
-        (base32 "0pg3yhicggby978n8war9n5zzigr95mvnsipnk6zgsjn6gyvjdm5"))))
-    (build-system go-build-system)
-    (arguments
-     (list
-      #:import-path "go-simpler.org/assert"))
-    (home-page "https://go-simpler.org/assert")
-    (synopsis "Assertions for the standard testing package")
-    (description
-     "This package implements assertions for the standard @code{testing}
-package, and is a minimalistic replacement for the @code{stretchr/testify}
-package.")
-    (license license:mpl2.0)))
-
-(define-public go-go-simpler-org-musttag
-  (package
-    (name "go-go-simpler-org-musttag")
-    (version "0.14.0")
-    (source
-     (origin
-       (method git-fetch)
-       (uri (git-reference
-              (url "https://github.com/go-simpler/musttag")
-              (commit (string-append "v" version))))
-       (file-name (git-file-name name version))
-       (sha256
-        (base32 "15kvnppc2q8ay1m8lhag0bmdx08kc68lzv78699qkyi6bcw68ajf"))))
-    (build-system go-build-system)
-    (arguments
-     (list
-      #:import-path "go-simpler.org/musttag"
-      #:test-flags #~(list "-skip" "TestAnalyzer")))
-    (native-inputs
-     (list go-go-simpler-org-assert))
-    (propagated-inputs
-     (list go-golang-org-x-tools))
-    (home-page "https://go-simpler.org/musttag")
-    (synopsis "Enforce field tags in (un)marshaled structs")
-    (description
-     "This package checks that exported fields of a struct passed to a
-@code{Marshal}-like function are annotated with the relevant tag.")
-    (license license:mpl2.0)))
-
 (define-public go-go-simpler-org-sloglint
   (package
     (name "go-go-simpler-org-sloglint")

gnu/packages/golang-xyz.scm

@@ -4683,7 +4683,7 @@ contexts (e.g. testing).")
 (define-public go-github-com-charlievieth-fastwalk
   (package
     (name "go-github-com-charlievieth-fastwalk")
-    (version "1.0.14")
+    (version "1.0.8")
     (source
      (origin
        (method git-fetch)
@@ -4692,7 +4692,7 @@ contexts (e.g. testing).")
              (commit (string-append "v" version))))
        (file-name (git-file-name name version))
        (sha256
-        (base32 "0ab90pdqgnd0a6ylmq35zca0imj2pp4pxz2bcmg2zx0szv3910im"))))
+        (base32 "17zy17q31p8b93bf703rr0xqafp02bb0slkrgpxb8r0aaxz3zg4y"))))
     (build-system go-build-system)
     (arguments
      (list

gnu/packages/ibus.scm

@@ -36,7 +36,6 @@
   #:use-module (guix licenses)
   #:use-module (guix packages)
   #:use-module (guix gexp)
-  #:use-module (guix deprecation)
   #:use-module (guix download)
   #:use-module (guix git-download)
   #:use-module (guix build-system cmake)
@@ -947,42 +946,37 @@ traditional Chinese output.")
 hanja dictionary and small hangul character classification.")
     (license lgpl2.1+)))
 
-(define-public ibus-hangul
+(define-public ibus-libhangul
   (package
-    (name "ibus-hangul")
-    (version "1.5.5")
+    (name "ibus-libhangul")
+    (version "1.5.3")
     (source
      (origin
-       (method git-fetch)
-       (uri (git-reference
-             (url "https://github.com/libhangul/ibus-hangul")
-             (commit version)))
-       (file-name (git-file-name name version))
+       (method url-fetch)
+       (uri (string-append "https://github.com/libhangul/ibus-hangul/"
+                           "releases/download/" version
+                           "/ibus-hangul-" version ".tar.gz"))
        (sha256
-        (base32 "0wsbh6ii223wdai2qwcwy6sj5jr9zzma7511fhkfq4m2qxdhwsn7"))))
+        (base32
+         "1400ba2p34vr9q285lqvjm73f6m677cgfdymmjpiwyrjgbbiqrjy"))))
     (build-system gnu-build-system)
     (arguments
-     (list
-      #:make-flags
-      #~'("DISABLE_GUI_TESTS=ibus-hangul")
-      #:phases
-      #~(modify-phases %standard-phases
-          (add-after 'install 'wrap
-            (lambda* (#:key inputs #:allow-other-keys)
-              (wrap-program (string-append #$output
-                                           "/libexec/ibus-setup-hangul")
-                `("GUIX_PYTHONPATH" ":" prefix (,(getenv "GUIX_PYTHONPATH")))
-                `("LD_LIBRARY_PATH" ":" prefix
-                  (,(dirname (search-input-file inputs "lib/libhangul.so"))))
-                `("GI_TYPELIB_PATH" ":" prefix
-                  (,(getenv "GI_TYPELIB_PATH")))))))))
+     `(#:phases
+       (modify-phases %standard-phases
+         (add-after 'install 'wrap
+           (lambda* (#:key inputs outputs #:allow-other-keys)
+             (wrap-program (string-append (assoc-ref outputs "out")
+                                          "/libexec/ibus-setup-hangul")
+               `("GUIX_PYTHONPATH" ":" prefix (,(getenv "GUIX_PYTHONPATH")))
+               `("LD_LIBRARY_PATH" ":" prefix
+                 (,(string-append (assoc-ref inputs "libhangul") "/lib")))
+               `("GI_TYPELIB_PATH" ":" prefix
+                 (,(getenv "GI_TYPELIB_PATH"))))
+             #t)))))
     (native-inputs
-     (list autoconf
-           automake
-           gettext-minimal
-           `(,glib "bin")
-           libtool
-           pkg-config))
+     `(("pkg-config" ,pkg-config)
+       ("gettext" ,gettext-minimal)
+       ("glib:bin" ,glib "bin")))
     (inputs
      (list bash-minimal
            ibus
@@ -997,9 +991,6 @@ hanja dictionary and small hangul character classification.")
      "ibus-hangul is a Korean input method engine for IBus.")
     (license gpl2+)))
 
-;; XXX: Deprecated on 2026-05-26.
-(define-deprecated-package ibus-libhangul ibus-hangul)
-
 (define-public ibus-table
   (package
     (name "ibus-table")

gnu/packages/image-viewers.scm

@@ -39,7 +39,6 @@
 ;;; Copyright © 2025 Vinicius Monego <monego@posteo.net>
 ;;; Copyright © 2025 Igorj Gorjaĉev <igor@goryachev.org>
 ;;; Copyright © 2026 Daniel Littlewood <dan@danielittlewood.xyz>
-;;; Copyright © 2026 Luis Guilherme Coelho <lgcoelho@disroot.org>
 ;;;
 ;;; This file is part of GNU Guix.
 ;;;
@@ -95,16 +94,13 @@
   #:use-module (gnu packages gnome)
   #:use-module (gnu packages golang-build)
   #:use-module (gnu packages golang-xyz)
-  #:use-module (gnu packages gstreamer)
   #:use-module (gnu packages gtk)
   #:use-module (gnu packages graphics)
   #:use-module (gnu packages haskell-xyz)
   #:use-module (gnu packages image)
   #:use-module (gnu packages image-processing)
   #:use-module (gnu packages imagemagick)
-  #:use-module (gnu packages kde-frameworks)
   #:use-module (gnu packages linux)
-  #:use-module (gnu packages logging)
   #:use-module (gnu packages maths)
   #:use-module (gnu packages ncurses)
   #:use-module (gnu packages pdf)
@@ -112,7 +108,6 @@
   #:use-module (gnu packages perl-check)
   #:use-module (gnu packages photo)
   #:use-module (gnu packages pkg-config)
-  #:use-module (gnu packages pretty-print)
   #:use-module (gnu packages profiling)
   #:use-module (gnu packages python)
   #:use-module (gnu packages python-build)
@@ -125,8 +120,6 @@
   #:use-module (gnu packages sqlite)
   #:use-module (gnu packages suckless)
   #:use-module (gnu packages stb)
-  #:use-module (gnu packages tbb)
-  #:use-module (gnu packages tls)
   #:use-module (gnu packages terminals)
   #:use-module (gnu packages upnp)
   #:use-module (gnu packages version-control)
@@ -1293,84 +1286,6 @@ workspaces.
 (define-deprecated-package python-ueberzug
   ueberzug)
 
-(define-public ueberzugpp
-  (package
-    (name "ueberzugpp")
-    (version "2.9.10")
-    (source
-      (origin
-        (method git-fetch)
-        (uri (git-reference
-              (url "https://github.com/jstkdng/ueberzugpp")
-              (commit (string-append "v" version))))
-        (file-name (git-file-name name version))
-        (sha256
-         (base32 "1jac2sca4pmcxp8xcvaxhf6j15phyc85gb5n9ymajbahnd4hbcv2"))))
-    (build-system cmake-build-system)
-    (arguments
-     (list #:tests? #f    ; no tests
-           #:configure-flags
-           #~(list "-DENABLE_OPENCV=ON"
-                   "-DENABLE_X11=ON"
-                   "-DENABLE_WAYLAND=ON")))
-    (native-inputs
-     (list extra-cmake-modules
-           gobject-introspection
-           pkg-config))
-    (inputs
-     (list cairo
-           chafa
-           cli11
-           expat
-           fftw
-           fmt
-           imagemagick
-           imath
-           lcms
-           libexif
-           libgsf
-           librsvg
-           libsixel
-           libwebp
-           libxcb
-           matio
-           nlohmann-json
-           opencv
-           openexr
-           openssl
-           orc
-           pango
-           poppler
-           range-v3
-           spdlog
-           tbb
-           vips
-           wayland
-           wayland-protocols
-           xcb-util-image))
-    (home-page "https://github.com/jstkdng/ueberzugpp")
-    (synopsis "Drop in replacement for ueberzug written in C++")
-    (description "Überzug++ is a command line utility written in C++ which
-allows to draw images on terminals by using X11/Wayland child windows, sixels,
- kitty and iterm2.
-
-Advantages over @command{w3mimgdisplay}:
-@itemize
-@item Support for Wayland: Sway, Hyprland, niri and Wayfire
-@item No race conditions as a new window is created to display images
-@item Expose events will be processed, so images will be redrawn on switch
-workspaces
-@item Tmux support on X11, Sway and Hyprland
-@item Terminals without the @env{WINDOWID} environment variable are supported
-@item Chars are used as position - and size unit
-@item No memory leak (usage of smart pointers)
-@item A lot of image formats supported (through OpenCV and libvips).
-@item GIF and animated WEBP support on X11, Sixel, Sway and hyprland
-@item Fast image downscaling (through OpenCV and OpenCL)
-@item Cache resized images for faster viewing
-@end itemize")
-    (license license:gpl3)))
-
 (define-public vv
   (package
     (name "vv")

gnu/packages/prolog.scm

@@ -237,7 +237,7 @@ it.")
 (define-public trealla
   (package
     (name "trealla")
-    (version "2.100.24")
+    (version "2.100.15")
     (source
      (origin
        (method git-fetch)
@@ -246,7 +246,7 @@ it.")
           (url "https://github.com/trealla-prolog/trealla")
           (commit (string-append "v" version))))
        (sha256
-        (base32 "09jm5hs2lv481yzf76p646jx6467zx98bbbsg24xh3glk1f9gaaq"))
+        (base32 "1fr3h0hqk5bbzr8n415pd24n2nvxhyaxi03hn5s78q1yklynw13f"))
        (file-name (git-file-name name version))))
     (build-system gnu-build-system)
     (inputs

gnu/packages/python-check.scm

@@ -2246,21 +2246,18 @@ attachments).
 (define-public python-pyflakes
   (package
     (name "python-pyflakes")
-    (version "3.4.0")
+    (version "3.2.0")
     (source
      (origin
-       (method git-fetch)
-       (uri (git-reference
-              (url "https://github.com/PyCQA/pyflakes")
-              (commit version)))
-       (file-name (git-file-name name version))
+       (method url-fetch)
+       (uri (pypi-uri "pyflakes" version))
        (sha256
-        (base32 "0ag6j4flayslbxcqipmfy5njawzy66py71p63mpjsys4gy70jhg1"))))
+        (base32 "0gxgz0kg008pgmjk1dn8z3g00dfa9pc3f80pm6r1yqjly4zn0q8w"))))
     (build-system pyproject-build-system)
-    (arguments
-     (list #:test-backend #~'unittest))
     (native-inputs
-     (list python-setuptools))
+     (list python-pytest
+           python-setuptools
+           python-wheel))
     (home-page "https://github.com/PyCQA/pyflakes")
     (synopsis "Passive checker of Python programs")
     (description

gnu/packages/python-web.scm

@@ -2378,7 +2378,7 @@ for adding, removing and dropping callbacks.")
     (build-system pyproject-build-system)
     (arguments
      (list
-      ;; tests: 3046 passed, 31 skipped, 29 xfailed, 2 subtests passed
+      ;; tests: 3045 passed, 32 skipped, 29 xfailed, 2 subtests passed
       #:test-flags
       '(list
         "-o" "addopts=''"               ; Avoid -p pytest_cov.
@@ -2449,6 +2449,7 @@ for adding, removing and dropping callbacks.")
      (list gunicorn-bootstrap
            python-cython
            python-freezegun
+           python-isal
            python-pytest
            python-pytest-mock
            python-pytest-xdist
@@ -2760,12 +2761,12 @@ stream is an enhanced asynchronous iterable.")
 (define-public python-asgiref
   (package
     (name "python-asgiref")
-    (version "3.11.1")
+    (version "3.8.1")
     (source (origin
               (method url-fetch)
               (uri (pypi-uri "asgiref" version))
               (sha256
-               (base32 "1km4xlaa21z2h0gz8x84gfgrq8k2mhg48rc0hkz3wxky7g24s62z"))))
+               (base32 "146mhkn3zp2bqf7j6r3chdlvfzgs5x1lrnqahsllgjdyl20bshy3"))))
     (build-system pyproject-build-system)
     (native-inputs
      (list python-pytest

gnu/packages/python-xyz.scm

@@ -3732,31 +3732,23 @@ libraries to make them compatible with the Array API standard")
 (define-public python-array-api-strict
   (package
     (name "python-array-api-strict")
-    (version "2.5")
+    (version "2.4.1")
     (source
      (origin
        (method url-fetch)
        (uri (pypi-uri "array_api_strict" version))
        (sha256
-        (base32 "1ig116ld5k8wx82ahld4l7qcb0d4s5s4f4a0nrflrh3hzabyarvp"))))
+        (base32 "0k1v3h54y1yny8mhgwjk6p51zf87farfk1xn9842g5lcrfhxqxvc"))))
     (build-system pyproject-build-system)
     (arguments
      (list
-      ;; tests: 585 passed, 2 deselected
+      ;; tests: 584 passed, 1 skipped, 2 deselected
       #:test-flags
-      ;; hypothesis.errors.InvalidArgument:
-      ;; xp.__array_api_version__='2025.12', but it must be a valid version
-      ;; string ('2021.12', '2022.12', '2023.12', '2024.12'). If the standard
-      ;; version you want is not available, please ensure you're using the
-      ;; latest version of Hypothesis, then open an issue if one doesn't
-      ;; already exist.
-      #~(list "--ignore=array_api_strict/tests/test_set_functions.py"
-              ;; ModuleNotFoundError: No module named 'numpy', not sure why?
-              "-k" (string-append "not test_disabled_extensions"
+      ;; ModuleNotFoundError: No module named 'numpy', not sure why?
+      #~(list "-k" (string-append "not test_disabled_extensions"
                                   " and not test_environment_variables"))))
     (native-inputs
-     (list python-hypothesis
-           python-pytest
+     (list python-pytest
            python-setuptools
            python-setuptools-scm))
     (propagated-inputs
@@ -8952,20 +8944,16 @@ and convert DDL to BigQuery JSON schema.")
 (define-public python-jsonschema
   (package
     (name "python-jsonschema")
-    (version "4.26.0")
+    (version "4.23.0")
     (source
      (origin
-       (method git-fetch)
-       (uri (git-reference
-              (url "https://github.com/Julian/jsonschema")
-              (commit (string-append "v" version))))
-       (file-name (git-file-name name version))
+       (method url-fetch)
+       (uri (pypi-uri "jsonschema" version))
        (sha256
-        (base32 "0p89jy7s1agi2zqrsdm56p843k847n9cixjsc12hnzscll37kysk"))))
+        (base32 "1i3b4sckkc3v8vckqa11xbrj695qzrzsfzrkclra6lb3ybz9f56p"))))
     (build-system pyproject-build-system)
     (arguments
      (list
-      ;; tests: 7744 passed, 71 skipped
       #:phases
       #~(modify-phases %standard-phases
           (add-before 'check 'pre-check
@@ -8975,20 +8963,21 @@ and convert DDL to BigQuery JSON schema.")
      (list python-hatchling
            python-hatch-fancy-pypi-readme
            python-hatch-vcs
-           python-jsonpath-ng
+           ;; For <tests/test_cli.py::TestCLIIntegration::test_license>.
+           python-pip
            python-pytest))
     (propagated-inputs
      (list python-attrs
-           python-jsonschema-specifications
-           python-referencing-bootstrap
-           python-rpds-py
-           ;; [optional]
            python-fqdn
            python-idna
+           python-importlib-resources
            python-isoduration
            python-jsonpointer
+           python-jsonschema-specifications
            python-rfc3339-validator
            python-rfc3986-validator
+           python-referencing-bootstrap
+           python-rpds-py
            python-uri-template
            python-webcolors))
     (home-page "https://github.com/Julian/jsonschema")
@@ -9326,8 +9315,7 @@ JavaScript-like message boxes.  Types of dialog boxes include:
            ;; See <https://github.com/pympler/pympler/issues/134>.
            "--deselect=test/muppy/test_summary.py::SummaryTest::test_repr_function"
            ;; This test times out.
-           "--deselect=test/gui/test_web.py::WebGuiTest::test_traceback"
-           "--deselect=test/muppy/test_tracker.py::TrackerTest::test_otracker_diff")))
+           "--deselect=test/gui/test_web.py::WebGuiTest::test_traceback")))
       (native-inputs
        (list python-pytest python-setuptools))
       (home-page "https://pythonhosted.org/Pympler/")
@@ -10056,13 +10044,13 @@ Google and Numpydoc format.")
 (define-public python-docutils
   (package
     (name "python-docutils")
-    (version "0.22.4")
+    (version "0.21.2")
     (source
      (origin
        (method url-fetch)
        (uri (pypi-uri "docutils" version))
        (sha256
-        (base32 "0s4ryafs954ivgb7bifzpbv98vb2mcr0s8wi9nvwpglsvqgkpdad"))))
+        (base32 "0vwqzbmzdvwx23myx4cg8s8mdkrqnfxpa9yi7jm2s66z5rrihsrs"))))
     (build-system pyproject-build-system)
     (arguments
      (list
@@ -11494,16 +11482,13 @@ For some datatypes the overhead can be reduced by using khash by factor 4-8.")
   ;; TODO: Move to python-build.
   (package
     (name "python-cython")
-    (version "3.2.5")
+    (version "3.1.7")
     (source
      (origin
-       (method git-fetch)
-       (uri (git-reference
-              (url "https://github.com/cython/cython")
-              (commit version)))
-       (file-name (git-file-name name version))
+       (method url-fetch)
+       (uri (pypi-uri "cython" version))
        (sha256
-        (base32 "07n0x4z0ifkhl8hi47amqhqfjc6jlh5dra9r54nlsnwnai83psy1"))))
+        (base32 "0gaslzb3virk4v6yh5a7dp6ka1lm267v994g8r25lck1702vjy3g"))))
     (build-system pyproject-build-system)
     (arguments
      (list
@@ -11511,16 +11496,17 @@ For some datatypes the overhead can be reduced by using khash by factor 4-8.")
       #:test-flags
       #~(list "runtests.py"
               "-vv"
-              ;; Some tests fail when number of cores are 24, keep on save
-              ;; minimal count.
-              "-j" (number->string (min 8 (parallel-job-count)))
+              "-j" (number->string (parallel-job-count))
               "-x" (string-join
                     (list "annotate_html"
                           "Debugger"
+                          ;; It introduces cycle.
+                          "numpy_test"
                           ;; It fails with AssertionError: Failed doctest test
                           ;; for complex_numbers_cpp.double_abs.
-                          ;; See: <https://github.com/cython/cython/issues/6528>.
                           "complex_numbers_cpp"
+                          ;; This test fails when running on 24 cores.
+                          "cpp_stl_conversion"
                           #$@(if (target-32bit?)
                                  ;; XXX: On 32-bit architectures, running the
                                  ;; parallel tests fails on many-core systems.
@@ -11547,7 +11533,8 @@ For some datatypes the overhead can be reduced by using khash by factor 4-8.")
               (setenv "HOME" "/tmp"))))))
     (native-inputs
      (list libxcrypt
-           python-setuptools))
+           python-setuptools
+           python-wheel))
     ;; we need the full python package and not just the python-wrapper
     ;; because we need libpython3.3m.so
     (inputs
@@ -11622,8 +11609,16 @@ def load_dynamic(name, path):
               ;; time of the test suite.
               (setenv "CFLAGS" "-O0"))))))))
 
-;; XXX: Deprecated on <2026-05-28>.
-(define-public python-cython-next python-cython)
+(define-public python-cython-next
+  (package
+    (inherit python-cython)
+    (version "3.2.2")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (pypi-uri "cython" version))
+       (sha256
+        (base32 "0d0n0yyicr7icd4f5kn1wwbjqyad6j4m640xlqlk3ixchgad7bf3"))))))
 
 ;; NOTE: when upgrading numpy please make sure that python-numba,
 ;; python-pandas and python-scipy still build, as these three packages are
@@ -11631,41 +11626,49 @@ def load_dynamic(name, path):
 (define-public python-numpy
   (package
     (name "python-numpy")
-    (version "2.4.6")
+    (version "2.3.1")
     (source
      (origin
-       ;; XXX: When switching to Git it fails to find Numpy's fork of Meson
-       ;; git submodule -- <https://github.com/numpy/meson>.
        (method url-fetch)
        (uri (string-append
              "https://github.com/numpy/numpy/releases/download/v"
              version "/numpy-" version ".tar.gz"))
        (sha256
-        (base32 "1nkx73blw298dzdk6blhrsann60cgdy7q6n3q9m785ia9865g8zk"))))
+        (base32 "0aqx8hsw54wfp7iv0h0ljlpsygvmrmi3rjic6rsa6v92lhhaxj8y"))))
     (build-system pyproject-build-system)
     (arguments
      (list
-      ;; tests: 47255 passed, 1079 skipped, 32 xfailed, 2 xpassed, 318 warnings
+      ;; tests: 47513 passed, 1740 skipped, 33 xfailed, 5 xpassed, 341 warnings
       #:modules '((guix build utils)
                   (guix build pyproject-build-system)
                   (ice-9 format))
       #:test-flags
       #~(list "-m" "not slow"
-              "--numprocesses" (number->string (min 8 (parallel-job-count))))
+              "--numprocesses" (number->string (min 8 (parallel-job-count)))
+              ;; See: <https://github.com/numpy/numpy/issues/27531>,
+              ;;      <https://github.com/numpy/numpy/issues/17685>,
+              ;;      <https://github.com/numpy/numpy/issues/17635>.
+              "-k" "not test_api_importable")
       #:phases
       #~(modify-phases %standard-phases
           (add-after 'unpack 'fix-executable-paths
-            (lambda* (#:key inputs #:allow-other-keys)
+            (lambda _
               (substitute* "numpy/distutils/exec_command.py"
                 (("'/bin/sh'")
                  (format #f "~s" (which "bash"))))
               (substitute* "numpy/meson.build"
                 ;; Relay on python from the PATH instead of full reference
                 ;; stored in built wheel.
-                (("'py.full_path\\(\\)'") "'python'"))
-              (substitute* "numpy/_core/tests/test_cpu_features.py"
-                (("/bin/true")
-                 (search-input-file inputs "bin/true")))))
+                (("'py.full_path\\(\\)'") "'python'"))))
+          ;; This isn't architecture specific.
+          ;; TODO: Remove this conditional and apply for all builds.
+          #$@(if (target-ppc64le?)
+                 #~((add-after 'unpack 'patch-bin-true
+                      (lambda* (#:key inputs #:allow-other-keys)
+                        (substitute* "numpy/_core/tests/test_cpu_features.py"
+                          (("/bin/true")
+                           (search-input-file inputs "bin/true"))))))
+                 #~())
           (add-before 'build 'parallelize-build
             (lambda _
               (setenv "OMP_NUM_THREAD"
@@ -11685,7 +11688,7 @@ def load_dynamic(name, path):
                                  (string-split (getenv "CPLUS_INCLUDE_PATH") #\:))
                          ":")))))
           (add-before 'build 'configure-blas
-            (lambda _
+            (lambda* (#:key inputs #:allow-other-keys)
               (call-with-output-file "site.cfg"
                 (lambda (port)
                   (format port
@@ -11697,11 +11700,7 @@ include_dirs = ~:*~a/include~%" #$(this-package-input "openblas"))))))
             (lambda* (#:key tests? test-flags #:allow-other-keys)
               (when tests?
                 (with-directory-excursion #$output
-                  (apply invoke "pytest" test-flags)
-                  (let ((pytest-cache (string-append #$output
-                                                     "/.pytest_cache")))
-                    (when (access? pytest-cache X_OK)
-                      (delete-file-recursively pytest-cache)))))))
+                  (apply invoke "pytest" test-flags)))))
           ;; The executables provided by this package ('f2py' and 'numpy-config')
           ;; only depend on Python.  By customizing the wrap phase we can ensure
           ;; that we don't add all Python packages listed in native-inputs to
@@ -11718,14 +11717,12 @@ include_dirs = ~:*~a/include~%" #$(this-package-input "openblas"))))))
                        (find-files (in-vicinity #$output "/bin"))))))))
     (native-inputs
      (list gfortran
-           python-cython
            python-hypothesis
            python-meson
            python-pytest
-           python-pytest-xdist))
-    (inputs
-     (list bash
-           openblas))
+           python-pytest-xdist
+           python-setuptools
+           python-typing-extensions))
     (home-page "https://numpy.org")
     (synopsis "Fundamental package for scientific computing with Python")
     (description "NumPy is the fundamental package for scientific computing
@@ -13496,7 +13493,7 @@ Python list with elements of type @code{PIL.Image} (from the
 (define-public python-pillow
   (package
     (name "python-pillow")
-    (version "12.2.0")
+    (version "12.1.1")
     (source
      (origin
        (method git-fetch)
@@ -13505,7 +13502,7 @@ Python list with elements of type @code{PIL.Image} (from the
               (commit version)))
        (file-name (git-file-name name version))
        (sha256
-        (base32 "140ynzxpazq6gq041bhkzx314z4kkzv3wlmvph68a0nkj9nqa3pg"))))
+        (base32 "1g374rklljx0941j6d1gib9pgcq3scmqw9psqaj2c7m8pilqsn9n"))))
     (build-system pyproject-build-system)
     (arguments
      (list
@@ -13546,7 +13543,7 @@ stored in a few basic pixel formats.  It should provide a solid foundation for
 a general image processing tool.")
     (properties `((cpe-name . "pillow")))
     (license (license:x11-style
-              "https://github.com/python-pillow/Pillow/blob/12.2.0/LICENSE"
+              "https://github.com/python-pillow/Pillow/blob/12.1.1/LICENSE"
               "MIT-CMU License"))))
 
 (define-public python-pillow-avif-plugin
@@ -15534,21 +15531,20 @@ to Python code.")
 (define-public python-asttokens
   (package
     (name "python-asttokens")
-    (version "3.0.1")
+    (version "3.0.0")
     (source
      (origin
-       (method git-fetch)
-       (uri (git-reference
-             (url "https://github.com/gristlabs/asttokens")
-             (commit (string-append "v" version))))
-       (file-name (git-file-name name version))
-       (sha256 (base32 "1qqi7dygcv58czrsafc4gf41prfb6shd0crx33kd9wypk0v29afn"))))
+       (method url-fetch)
+       (uri (pypi-uri "asttokens" version))
+       (sha256
+        (base32 "1ixv6n8cg08n9h6rwyhd3lkzyjiwpbfv56dk338w3c32inm8pk8d"))))
     (build-system pyproject-build-system)
     (native-inputs
      (list python-astroid
            python-pytest
            python-setuptools
-           python-setuptools-scm))
+           python-setuptools-scm
+           python-wheel))
     (home-page "https://github.com/gristlabs/asttokens")
     (synopsis "Python library to annotate abstract syntax trees")
     (description "The @code{asttokens} module annotates Python abstract syntax
@@ -18126,16 +18122,14 @@ primary use case is APIs defined before keyword-only parameters existed.")
 (define-public python-pyasn1
   (package
     (name "python-pyasn1")
-    (version "0.6.3")
+    (version "0.6.1")
     (source
      (origin
-       (method git-fetch)
-       (uri (git-reference
-              (url "https://github.com/pyasn1/pyasn1")
-              (commit (string-append "v" version))))
-       (file-name (git-file-name name version))
+       (method url-fetch)
+       (uri (pypi-uri "pyasn1" version))
        (sha256
-        (base32 "0b22m94j163nikfkl031hgrfasb6wgqp3374b8dbr84jalkl0ykw"))))
+        (base32
+         "0d5h500ig8sp72pabd1wcyglc4951xalbkqahf056dl4vlmhsn3g"))))
     (build-system pyproject-build-system)
     (arguments
      (list #:test-backend #~'unittest
@@ -22753,22 +22747,20 @@ times.
 (define-public python-lazy-object-proxy
   (package
     (name "python-lazy-object-proxy")
-    (version "1.12.0")
+    (version "1.11.0")
     (source
      (origin
-       (method git-fetch)
-       (uri (git-reference
-              (url "https://github.com/ionelmc/python-lazy-object-proxy")
-              (commit (string-append "v" version))))
-       (file-name (git-file-name name version))
+       (method url-fetch)
+       (uri (pypi-uri "lazy_object_proxy" version))
        (sha256
-        (base32 "1qig879igkjmj4mir26b0n40w3vn5jqn293172s6npxnb4k90kzk"))))
+        (base32 "174fswfrsqr7yj72f8fyry34qxgagbfw37vzljxbp7schq8l91qq"))))
     (build-system pyproject-build-system)
     (native-inputs
      (list python-pytest
            python-pytest-benchmark
            python-setuptools
-           python-setuptools-scm))
+           python-setuptools-scm
+           python-wheel))
     (home-page "https://github.com/ionelmc/python-lazy-object-proxy")
     (synopsis "Lazy object proxy for Python")
     (description
@@ -24796,7 +24788,7 @@ instead of servers and network commands.")
 (define-public python-astroid
   (package
     (name "python-astroid")
-    (version "4.1.2")
+    (version "3.3.11")
     (source
      (origin
        (method git-fetch)
@@ -24805,12 +24797,24 @@ instead of servers and network commands.")
              (commit (string-append "v" version))))
        (file-name (git-file-name name version))
        (sha256
-        (base32 "04x82slqxyyv0pikz680sw5aj2vbid1s7zdnzgqj7dlbz68c0ch0"))))
+        (base32 "1x5903kmi47pc87r949lym2cwl0xg885xyy730adxv0g6r083zwn"))))
     (build-system pyproject-build-system)
+    (arguments
+     ;; UserWarning: pkg_resources is deprecated as an API. See
+     ;; https://setuptools.pypa.io/en/latest/pkg_resources.html. The
+     ;; pkg_resources package is slated for removal as early as
+     ;; 2025-11-30. Refrain from using this package or pin to Setuptools<81.
+     (list #:test-flags
+           #~(list "-k" "not test_identify_old_namespace_package_protocol")))
     (native-inputs
      (list python-mypy-minimal
            python-pytest
-           python-setuptools))
+           python-setuptools
+           python-wheel))
+    (propagated-inputs
+     (list python-lazy-object-proxy
+           python-typing-extensions
+           python-wrapt))
     (home-page "https://github.com/PyCQA/astroid")
     (synopsis "Python source code base representation")
     (description "@code{python-astroid} provides a common base representation
@@ -27926,23 +27930,26 @@ codecs for use in data storage and communication applications.")
 (define-public python-dill
   (package
     (name "python-dill")
-    (version "0.4.1")
+    (version "0.4.0")
     (source
      (origin
-       (method git-fetch)
-       (uri (git-reference
-              (url "https://github.com/uqfoundation/dill")
-              (commit version)))
-       (file-name (git-file-name name version))
+       (method url-fetch)
+       (uri (pypi-uri "dill" version))
        (sha256
-        (base32 "09ig6820sd68cjixl5vkwkwvvgdii8qhaikc1rxhabhwxfymc7v2"))))
+        (base32 "1w5w5hlijw7ahqji45ssyvdip5pv074h4nw97bsj8ws7vz9g2cq6"))))
     (build-system pyproject-build-system)
     (arguments
-     (list #:test-backend #~'custom
-           #:test-flags #~(list "dill/tests/__main__.py")))
+     (list
+      #:phases #~(modify-phases %standard-phases
+                   (replace 'check
+                     (lambda* (#:key tests? #:allow-other-keys)
+                       (if tests?
+                           ;; Extracted from tox.ini
+                           (invoke "python" "dill/tests/__main__.py")
+                           (format #t "test suite not run~%")))))))
     (native-inputs
-     (list python-setuptools))
-    (home-page "http://dill.rtfd.io/")
+     (list python-setuptools python-wheel))
+    (home-page "https://pypi.org/project/dill/")
     (synopsis "Serialize all of Python")
     (description "Dill extends Python's @code{pickle} module for serializing
 and de-serializing Python objects to the majority of the built-in Python
@@ -30904,20 +30911,14 @@ positioning, and keyboard input.")
 (define-public python-readme-renderer
   (package
     (name "python-readme-renderer")
-    (properties '((commit . "e603eb17fcabd6bd20706d278fc24a7e9a663190")
-                  (revision . "0")))
-    (version (git-version "44.0"
-                          (assoc-ref properties 'revision)
-                          (assoc-ref properties 'commit)))
+    (version "44.0")
     (source
      (origin
-       (method git-fetch)
-       (uri (git-reference
-              (url "https://github.com/pypa/readme_renderer")
-              (commit (assoc-ref properties 'commit))))
-       (file-name (git-file-name name version))
+       (method url-fetch)
+       (uri (pypi-uri "readme_renderer" version))
        (sha256
-        (base32 "15w3lzgg8gcq22saqy2cpnv3hvkrixhyn57fcg1p1bm2njh1hr61"))))
+        (base32
+         "1qfiqm3w1ydpbipns5nifa7h4wraxd72nh7imif819mzmd7064l7"))))
     (build-system pyproject-build-system)
     (arguments
      (list
@@ -33513,22 +33514,18 @@ systems in Python.")
 (define-public python-dotenv
   (package
     (name "python-dotenv")
-    (version "1.2.2")
+    (version "1.1.1")
     (source
      (origin
        (method url-fetch)
        (uri (pypi-uri "python_dotenv" version))
        (sha256
-        (base32 "1wwwg7gasqmnv5y2hb3w1155c8nai6zzih8x5hn0ifnpzf8ildrc"))))
+        (base32 "1aw9c5gw2gfjf7n3s7k6lb6ybz090hh60wq0daz4azr52sbkk9m8"))))
     (build-system pyproject-build-system)
-    (arguments
-     (list
-      #:test-flags
-      ;; .dotenv-real instead of dotenv
-      #~(list "-k not test_run_with_dotenv_and_command_flags")))
     (native-inputs
      (list python-pytest
-           python-setuptools))
+           python-setuptools
+           python-sh))
     (propagated-inputs
      (list python-click))
     (home-page "https://saurabh-kumar.com/python-dotenv/")
@@ -34617,22 +34614,19 @@ for styling strings in the terminal.")
 (define-public python-multipart
   (package
     (name "python-multipart")
-    (version "0.0.29")
-    (source
-     (origin
-       (method git-fetch)
-       (uri (git-reference
-              (url "https://github.com/Kludex/python-multipart")
-              (commit version)))
-       (file-name (git-file-name name version))
-       (sha256
-        (base32 "06rxa2xymdqri8zydy7xw2cnpsnzlv2jzdy9g86m5fpfca0pp9fm"))))
+    (version "0.0.20")
+    (source (origin
+              (method url-fetch)
+              (uri (pypi-uri "python_multipart" version))
+              (sha256
+               (base32
+                "04wxzakk3hs4z4xf3ldhym3gm46hjicn4iwiw150c8wfbfscml4d"))))
     (build-system pyproject-build-system)
     (native-inputs
      (list python-hatchling
            python-pytest
            python-pyyaml))
-    (home-page "https://github.com/Kludex/python-multipart")
+    (home-page "https://github.com/andrew-d/python-multipart")
     (synopsis "Streaming multipart parser for Python")
     (description
      "This package provides a streaming multipart parser for Python.")
@@ -35893,13 +35887,13 @@ line by line or column by column or a combination of both.")
 (define-public python-rpds-py
   (package
     (name "python-rpds-py")
-    (version "0.30.0")
+    (version "0.10.6")
     (source (origin
               (method url-fetch)
               (uri (pypi-uri "rpds_py" version))
               (sha256
                (base32
-                "110y8k62b9xb3slny7gf89943xpbji3s7vl7yz0g0jh1j37zg3yx"))))
+                "0l5slkvhq2vf64mapimmj6ginsv01mc4niyj90vvz3assq4agrac"))))
     (build-system cargo-build-system)
     (arguments
      (list
@@ -38399,32 +38393,18 @@ and @code{tokens_to_src} to roundtrip.")
 (define-public python-tomlkit
   (package
     (name "python-tomlkit")
-    (version "0.15.0")
+    (version "0.13.3")
     (source
      (origin
-       (method git-fetch)
-       (uri (git-reference
-              (url "https://github.com/sdispater/tomlkit")
-              (commit version)))
-       (file-name (git-file-name name version))
+       (method url-fetch)
+       (uri (pypi-uri "tomlkit" version))
        (sha256
-        (base32 "00sv5x8j78zkirzh9rl89lkpwfwhkhrq4mql2p4rqws1j37zx88g"))))
+        (base32 "18fjmmhiv5jkkg1dwidmxd0sjqnkf675igizxsa2ppspxr3z4323"))))
     (build-system pyproject-build-system)
-    (arguments
-     (list
-      #:phases
-      #~(modify-phases %standard-phases
-          ;; toml-test is submodule to
-          ;; <https://github.com/toml-lang/toml-test>.
-          (add-after 'unpack 'copy-toml-test-source
-            (lambda _
-              (copy-recursively
-               #$(package-source (this-package-native-input "toml-test"))
-               "tests/toml-test"))))))
     (native-inputs
      (list python-poetry-core
            python-pytest
-           toml-test))
+           python-pyyaml))
     (home-page "https://github.com/sdispater/tomlkit")
     (synopsis "Style-preserving TOML library")
     (description

gnu/packages/rust-crates.scm

@@ -747,10 +747,6 @@
   (crate-source "archery" "1.2.1"
                 "0sdqlmybcvd0rzv22ac3k3xxm5anr1gpm03sf02iy0jmrlhyvqpa"))
 
-(define rust-archery-1.2.2
-  (crate-source "archery" "1.2.2"
-                "07a4wn09ad1q7qi1bfdv03hl4668jaxm63rd6jxqgfzykpwsbq3h"))
-
 (define rust-archspec-0.1.3
   (crate-source "archspec" "0.1.3"
                 "1is6yjyk38hlijhp8yyk3xq3dgg5aass7rms5h6s2mjgrzcprdlx"))
@@ -3803,10 +3799,6 @@
   (crate-source "cc" "1.2.46"
                 "0diynsnlmw8fr032dxci5a79il5br2ws1l2a730v3cac0vhn6x5r"))
 
-(define rust-cc-1.2.48
-  (crate-source "cc" "1.2.48"
-                "0fk37741p34v904a49zcli9b65fmmir7sa06z3v95f6k1szvv0f4"))
-
 (define rust-cc-1.2.49
   (crate-source "cc" "1.2.49"
                 "05929ra8a2q81w45f932nr4blifnxkpr8i7lmcba28bm0c4k0n4h"))
@@ -24621,10 +24613,6 @@
   (crate-source "rpds" "1.1.0"
                 "194hjbsicmgqi3dyllqrz09mmhh597m2j9l49lr16cyfscambqd0"))
 
-(define rust-rpds-1.2.0
-  (crate-source "rpds" "1.2.0"
-                "0d7vpyignq837rh9wgcrq53xplsg5b85a3bcbq0x7m0rx22z8xcy"))
-
 (define rust-rpm-pkg-count-0.2.1
   (crate-source "rpm-pkg-count" "0.2.1"
                 "1jzh63l7k30l37s5gd2m2hvh8slzjaxw54s4xpcjnaqb8xfsq0sa"))
@@ -73522,32 +73510,42 @@
                                             rust-zerovec-0.10.4
                                             rust-zerovec-derive-0.10.3))
                      (python-rpds-py =>
-                                     (list rust-archery-1.2.2
-                                      rust-autocfg-1.5.0
-                                      rust-cc-1.2.48
-                                      rust-find-msvc-tools-0.1.5
-                                      rust-heck-0.5.0
-                                      rust-indoc-2.0.7
-                                      rust-libc-0.2.177
+                                     (list rust-archery-1.2.1
+                                      rust-autocfg-1.4.0
+                                      rust-bitflags-2.9.0
+                                      rust-cfg-if-1.0.0
+                                      rust-indoc-1.0.9
+                                      rust-libc-0.2.171
+                                      rust-lock-api-0.4.12
                                       rust-memoffset-0.9.1
                                       rust-once-cell-1.21.3
-                                      rust-portable-atomic-1.11.1
-                                      rust-proc-macro2-1.0.103
-                                      rust-pyo3-0.27.2
-                                      rust-pyo3-build-config-0.27.2
-                                      rust-pyo3-ffi-0.27.2
-                                      rust-pyo3-macros-0.27.2
-                                      rust-pyo3-macros-backend-0.27.2
-                                      rust-python3-dll-a-0.2.14
-                                      rust-quote-1.0.42
-                                      rust-rpds-1.2.0
-                                      rust-rustversion-1.0.22
-                                      rust-shlex-1.3.0
-                                      rust-syn-2.0.111
-                                      rust-target-lexicon-0.13.3
-                                      rust-triomphe-0.1.15
-                                      rust-unicode-ident-1.0.22
-                                      rust-unindent-0.2.4))
+                                      rust-parking-lot-0.12.3
+                                      rust-parking-lot-core-0.9.10
+                                      rust-proc-macro2-1.0.94
+                                      rust-pyo3-0.19.2
+                                      rust-pyo3-build-config-0.19.2
+                                      rust-pyo3-ffi-0.19.2
+                                      rust-pyo3-macros-0.19.2
+                                      rust-pyo3-macros-backend-0.19.2
+                                      rust-quote-1.0.40
+                                      rust-redox-syscall-0.5.10
+                                      rust-rpds-1.1.0
+                                      rust-scopeguard-1.2.0
+                                      rust-smallvec-1.15.0
+                                      rust-syn-1.0.109
+                                      rust-target-lexicon-0.12.16
+                                      rust-triomphe-0.1.14
+                                      rust-unicode-ident-1.0.18
+                                      rust-unindent-0.1.11
+                                      rust-windows-targets-0.52.6
+                                      rust-windows-aarch64-gnullvm-0.52.6
+                                      rust-windows-aarch64-msvc-0.52.6
+                                      rust-windows-i686-gnu-0.52.6
+                                      rust-windows-i686-gnullvm-0.52.6
+                                      rust-windows-i686-msvc-0.52.6
+                                      rust-windows-x86-64-gnu-0.52.6
+                                      rust-windows-x86-64-gnullvm-0.52.6
+                                      rust-windows-x86-64-msvc-0.52.6))
                      (python-rustworkx =>
                                        (list rust-adler2-2.0.1
                                         rust-aho-corasick-1.1.4

gnu/packages/shells.scm

@@ -924,7 +924,7 @@ and aims to be maximally portable across operating systems and C compilers.")
 (define-public loksh
   (package
     (name "loksh")
-    (version "7.9")
+    (version "7.8")
     (source (origin
               (method git-fetch)
               (uri (git-reference
@@ -936,7 +936,7 @@ and aims to be maximally portable across operating systems and C compilers.")
               (file-name (git-file-name name version))
               (sha256
                (base32
-                "0nwssdxcqs3fypfg884cwcmp21kmwsqrr5rvm1cck1qx5240hyjb"))))
+                "1x5kg01r0k7g825ia71f8an6585azba8x5khwdvq4dmnib11vakm"))))
     (build-system meson-build-system)
     (inputs (list ncurses))
     (native-inputs (list pkg-config))

gnu/packages/terminals.scm

@@ -1094,7 +1094,7 @@ minimalistic.")
 (define-public fzf
   (package
     (name "fzf")
-    (version "0.73.1")
+    (version "0.73.0")
     (source
      (origin
        (method git-fetch)
@@ -1103,7 +1103,7 @@ minimalistic.")
              (commit (string-append "v" version))))
        (file-name (git-file-name name version))
        (sha256
-        (base32 "1wyaggd00jgr519pxvik6hszgnp6dq71rn7xa20kf2qyi5p6bn65"))))
+        (base32 "1p6xda7ncpi38c5jyyi7ybsjmyj07axmax68iag0ccszm42hnq60"))))
     (build-system go-build-system)
     (arguments
      (list

gnu/packages/text-editors.scm

@@ -1413,9 +1413,7 @@ interface with CI pipeline UIs.")
             (lambda _
               (substitute* "packages/linux/icons.sh"
                 (("/usr/share")
-                 (string-append #$output "/share")))
-              (substitute* "TeXmacs/misc/mime/texmacs.desktop"
-                (("Icon=.*$") "Icon=TeXmacs\n"))))
+                 (string-append #$output "/share")))))
           (add-before 'configure 'gzip-flags
             (lambda _
               (substitute* "Makefile.in"