gnu: libarchive: Reference libraries absolutely via configure flags.

* gnu/packages/backup.scm (libarchive) [#:configure-flags]: Add 'LIBS' flag. [#:phases] {add--L-in-libarchive-pc}: Delete phase. Change-Id: I85f623043e98b82e46b9afe18c0be53cc7961d4b Signed-off-by: Maxim Cournoyer <maxim@guixotic.coop> Modified-by: Maxim Cournoyer <maxim@guixotic.coop>
gnu: libarchive: Update to 3.8.3.
2025-11-20 14:37:54 +09:00 · 2025-11-20 14:20:03 +09:00 · 2025-11-20 14:00:22 +09:00 · 2025-11-20 11:44:20 +09:00 · 2025-11-19 09:42:50 +09:00 · 2025-11-19 09:42:50 +09:00
546 changed files with 130404 additions and 58380 deletions
@@ -12,6 +12,15 @@ gnu/packages/audio\.scm                            @guix/audio
 gnu/packages/fluidplug\.scm                        @guix/audio
 gnu/packages/xiph\.scm                             @guix/audio

+gnu/packages/elixir(-.+|)\.scm$                    @guix/beam
+guix/build/mix-build-system\.scm                   @guix/beam
+guix/build-system/mix\.scm                         @guix/beam
+gnu/packages/erlang(-.+|)\.scm$                    @guix/beam
+guix/build/rebar-build-system\.scm                 @guix/beam
+guix/build-system/rebar\.scm                       @guix/beam
+guix/import/hexpm\.scm                             @guix/beam
+guix/scripts/import/hexpm\.scm                     @guix/beam
+
 gnu/packages/commencement\.scm                     @guix/bootstrap
 gnu/packages/mes\.scm                              @guix/bootstrap

@@ -45,7 +54,6 @@ guix/diagnostics\.scm                              @guix/core
 guix/discovery\.scm                                @guix/core
 guix/docker\.scm                                   @guix/core
 guix/download\.scm                                 @guix/core
-guix/elf\.scm                                      @guix/core
 guix/ftp-client\.scm                               @guix/core
 guix/gexp\.scm                                     @guix/core
 guix/git-authenticate\.scm                         @guix/core
@@ -118,6 +126,14 @@ guix/build/gnu-build-system\.scm                   @guix/core-packages
 guix/build/utils\.scm                              @guix/core-packages
 guix/build-system/gnu\.scm                         @guix/core-packages

+gnu/packages/crypto\.scm                           @guix/crypto
+gnu/packages/gnupg\.scm                            @guix/crypto
+gnu/packages/nettle\.scm                           @guix/crypto
+gnu/packages/password-utils\.scm                   @guix/crypto
+gnu/packages/security-token\.scm                   @guix/crypto
+gnu/packages/ssh\.scm                              @guix/crypto
+gnu/packages/tls\.scm                              @guix/crypto
+
 gnu/packages/debian\.scm                           @guix/debian

 \.texi$                                            @guix/documentation
@@ -190,6 +206,7 @@ tests/home-import\.scm                             @guix/home
 tests/home-services\.scm                           @guix/home

 gnu/packages/mpi\.scm                              @guix/hpc
+gnu/packages/oneapi\.scm                           @guix/hpc
 gnu/packages/rocm\.scm                             @guix/hpc
 gnu/packages/sycl\.scm                             @guix/hpc
 gnu/packages/tbb\.scm                              @guix/hpc
@@ -346,6 +363,7 @@ gnu/packages/openldap\.scm                         @guix/sysadmin
 gnu/packages/openstack\.scm                        @guix/sysadmin
 gnu/packages/prometheus\.scm                       @guix/sysadmin
 gnu/packages/rdesktop\.scm                         @guix/sysadmin
+gnu/packages/samba\.scm                            @guix/sysadmin
 gnu/packages/selinux\.scm                          @guix/sysadmin
 gnu/packages/storage\.scm                          @guix/sysadmin
 gnu/packages/task-runners\.scm                     @guix/sysadmin
@@ -14,7 +14,7 @@
 # Copyright © 2018 Oleg Pykhalov <go.wigust@gmail.com>
 # Copyright © 2018 Alex Vong <alexvong1995@gmail.com>
 # Copyright © 2019, 2023 Efraim Flashner <efraim@flashner.co.il>
-# Copyright © 2020, 2021, 2023 Maxim Cournoyer <maxim@guixotic.coop>
+# Copyright © 2020, 2021, 2023, 2025 Maxim Cournoyer <maxim@guixotic.coop>
 # Copyright © 2021 Chris Marusich <cmmarusich@gmail.com>
 # Copyright © 2021 Andrew Tropin <andrew@trop.in>
 # Copyright © 2023 Clément Lassieur <clement@lassieur.org>
@@ -170,6 +170,7 @@ MODULES =					\
  guix/build-system/gnu.scm			\
  guix/build-system/go.scm			\
  guix/build-system/guile.scm			\
+  guix/build-system/hare.scm			\
  guix/build-system/haskell.scm		\
  guix/build-system/julia.scm			\
  guix/build-system/linux-module.scm		\
@@ -201,7 +202,6 @@ MODULES =					\
  guix/ftp-client.scm				\
  guix/http-client.scm				\
  guix/gnupg.scm				\
-  guix/elf.scm					\
  guix/profiling.scm				\
  guix/store.scm				\
  guix/cvs-download.scm				\
@@ -240,6 +240,7 @@ MODULES =					\
  guix/build/gnu-build-system.scm		\
  guix/build/gnu-dist.scm			\
  guix/build/guile-build-system.scm		\
+  guix/build/hare-build-system.scm		\
  guix/build/luanti-build-system.scm		\
  guix/build/maven-build-system.scm		\
  guix/build/minetest-build-system.scm		\
@@ -265,6 +266,7 @@ MODULES =					\
  guix/build/kconfig.scm			\
  guix/build/linux-module-build-system.scm	\
  guix/build/store-copy.scm			\
+  guix/build/io.scm				\
  guix/build/json.scm				\
  guix/build/pack.scm				\
  guix/build/utils.scm				\
@@ -450,6 +452,10 @@ AUX_FILES =						\
  gnu/packages/aux-files/findclass.php			\
  gnu/packages/aux-files/guix.vim			\
  gnu/packages/aux-files/guix-nvim.vim			\
+  gnu/packages/aux-files/linux-libre/6.17-arm64.conf	\
+  gnu/packages/aux-files/linux-libre/6.17-i686.conf	\
+  gnu/packages/aux-files/linux-libre/6.17-riscv.conf	\
+  gnu/packages/aux-files/linux-libre/6.17-x86_64.conf	\
  gnu/packages/aux-files/linux-libre/6.16-arm.conf	\
  gnu/packages/aux-files/linux-libre/6.16-arm64.conf	\
  gnu/packages/aux-files/linux-libre/6.16-riscv.conf	\
@@ -586,6 +592,7 @@ SCM_TESTS =					\
  tests/http-client.scm				\
  tests/inferior.scm				\
  tests/ipfs.scm				\
+  tests/ld-wrapper.scm				\
  tests/lint.scm				\
  tests/modules.scm				\
  tests/monads.scm				\
@@ -21,7 +21,7 @@
 AC_PREREQ([2.69])
 AC_INIT([GNU Guix],
  [m4_esyscmd([build-aux/git-version-gen .tarball-version])],
-  [bug-guix@gnu.org], [guix],
+  [https://codeberg.org/guix/guix/issues/], [guix],
  [https://www.gnu.org/software/guix/])
 AC_CONFIG_AUX_DIR([build-aux])

@@ -3344,13 +3344,21 @@ for @b{at least one year}.  For example, @code{go-ipfs} was renamed to
 change to users, the package module provided this definition:

@findex deprecated-package
+@findex define-deprecated-package
@lisp
-(define-public go-ipfs
-  (deprecated-package "go-ipfs" kubo))
+(define-deprecated-package go-ipfs
+  kubo)
@end lisp

 That way, someone running @command{guix install go-ipfs} or similar sees
-a deprecation warning mentioning the new name.
+a deprecation warning mentioning the new package name; likewise, someone
+referring to the @code{go-ipfs} @emph{variable} from their manifest or
+package definition will see a warning.
+
+Under the hood, @code{define-deprecated-package} combines
+@code{define-deprecated/public-alias} to mark the variable as deprecated
+(see below), and the @code{deprecated-package} procedure to mark the
+package name as deprecated.

@cindex package removal policy
@anchor{package-removal-policy}
@@ -3360,8 +3368,8 @@ of life'' or being unmaintained may be removed; likewise, packages that
 have been @b{failing to build for two months or more} may be removed.

 There is no formal deprecation mechanism for this case, unless a
-replacement exists, in which case the @code{deprecated-package}
-procedure mentioned above can be used.
+replacement exists, in which case the @code{define-deprecated-package}
+macro mentioned above can be used.

 If the package being removed is a ``leaf'' (no other packages depend on
 it), it may be removed after a @b{one-month review period} of the patch
@@ -518,7 +518,7 @@ as ``SICP'', this book is a reference.
 You can also install it and read it from your computer:

@example
-guix install sicp info-reader
+guix install book-sicp info-reader
 info sicp
@end example

@@ -5737,9 +5737,9 @@ packages:
 guix shell -C gcc-toolchain cmake coreutils grep sed make -- @dots{}
@end example

-Or perhaps you'll find that you could just as well provide a definition
-for your package---@pxref{Defining Packages,,, guix, GNU Guix Reference
-Manual}, to learn more on how to do that.
+Or perhaps you'll find that you could just as well provide a package
+definition for your code---@pxref{Defining Packages,,, guix, GNU Guix
+Reference Manual}, to learn more on how to do that.

 Eventually, you'll have a list of packages that satisfies your needs.

@@ -145,6 +145,7 @@ Copyright @copyright{} 2025 jgart@*
 Copyright @copyright{} 2025 Artur Wroblewski@*
 Copyright @copyright{} 2025 Edouard Klein@*
 Copyright @copyright{} 2025 Rodion Goritskov@*
+Copyright @copyright{} 2025 dan@*

 Permission is granted to copy, distribute and/or modify this document
 under the terms of the GNU Free Documentation License, Version 1.3 or
@@ -5832,6 +5833,7 @@ Voilà!
@c What follows stems from discussions at
@c <https://debbugs.gnu.org/cgi/bugreport.cgi?bug=22629#134> as well as
@c earlier discussions on guix-devel@gnu.org.
+@c Updated in 2025 to refer to the Deprecation Policy.
@quotation Warning
 Before you publish your channel, we would like to share a few words of
 caution:
@@ -5846,10 +5848,10 @@ process.

@item
 Package modules and package definitions are Scheme code that uses
-various programming interfaces (APIs).  We, Guix developers, never
-change APIs gratuitously, but we do @emph{not} commit to freezing APIs
-either.  When you maintain package definitions outside Guix, we consider
-that @emph{the compatibility burden is on you}.
+various programming interfaces (APIs).  Those may occasionally change,
+in accordance with our deprecation policy (@pxref{Deprecation Policy}),
+and it is your responsibility as a channel author to adjust your code
+accordingly.

@item
 Corollary: if you're using an external channel and that channel breaks, please
@@ -10114,6 +10116,34 @@ directory, the parameter @code{#:javascript-files} can be used to
 specify a list of file names to feed to the minifier.
@end defvar

+@defvar mix-build-system
+This is a variable exported by @code{guix build-system mix}.  It implements
+the standard build procedure used by Elixr programs with
+@url{https://hexdocs.pm/mix/Mix.html,Mix}, which consists
+of running @command{mix compile}, thereby creating bytecode.
+
+The API is similar to the @var{gnu-build-system}, with some specifics for
+Elixir:
+@itemize
+@item
+@code{#:tests?} is a boolean, @code{#true} by default, determining whether tests
+for the current build have to be run or not.
+@item
+@code{#:test-flags} is a list of arguments append to the @command{mix test}
+invocation.  It defaults to @code{'()}.
+@item
+@code{#:mix-exs}, changes the full path to the @code{mix.exs}
+file.  It defaults to @code{"mix.exs"}.  Please refer to
+@url{https://hexdocs.pm/mix/Mix.html#module-environment-variables,upstream}
+documentation for more details.
+@item
+@code{#:mix-path}, appends extra code paths.  It
+defaults to @code{#f}.  Please refer to
+@url{https://hexdocs.pm/mix/Mix.html#module-environment-variables,upstream}
+documentation for more details.
+@end itemize
+@end defvar
+
@defvar mozilla-build-system
 This variable is exported by @code{(guix build-system mozilla)}.  It
 sets the @code{--target} and @code{--host} configuration flags to what
@@ -10489,6 +10519,29 @@ run SCons can be specified by selecting the appropriate SCons package
 with the @code{#:scons} parameter.
@end defvar

+@defvar hare-build-system
+This variable is exported by @code{(guix build-system hare)}.  It implements the
+Makefile build process typically used by Hare packages, removing the
+@code{configure} phase used by @code{gnu-build-system} and modifying existing
+phases to set the Hare architecture tag, module path, and package install
+destinations appropriately.
+
+This relies on the package's Makefile supporting, at minimum, the variables
+@code{HAREFLAGS} and @code{THIRDPARTYDIR}.  Packages may set @code{make-flags}
+to override or supplement these variables.
+
+By default, Hare modules are installed to the @code{lib} output if it exists,
+and all other files to the @code{bin} output. If an output does not exist,
+the default @code{out} output is used instead. This behavior may be overriden
+through the @code{#:binary-output} and @code{#:module-output} keyword arguments.
+
+@code{(guix build-system hare)} also provides utility definitions for creating
+Hare packages.  The variable @code{%hare-supported-systems} is the list of build
+targets currently supported by @code{hare}, for use in @code{supported-systems}
+(@pxref{package Reference}).  The procedure @code{target->hare-arch} may be used
+to get the Hare architecture tag for a given (supported) Guix target or system.
+@end defvar
+
@defvar haskell-build-system
 This variable is exported by @code{(guix build-system haskell)}.  It
 implements the Cabal build procedure used by Haskell packages, which
@@ -15477,10 +15530,34 @@ the updater for @uref{https://www.stackage.org, Stackage} packages.
 the updater for @uref{https://crates.io, Crates} packages.
@item launchpad
 the updater for @uref{https://launchpad.net, Launchpad} packages.
+
@item generic-html
-a generic updater that crawls the HTML page where the source tarball of
-the package is hosted, when applicable, or the HTML page specified by
-the @code{release-monitoring-url} property of the package.
+a generic updater that crawls, by default, the HTML page where the
+source tarball of the package is hosted, when applicable.  Behavior can
+be customized with the following package properties:
+
+@table @code
+@item release-monitoring-url
+an alternate URL to crawl;
+
+@item release-file-regexp
+an regular expression matching release file names, whose first
+subexpression must correspond to the version string.
+@end table
+
+Here is an example package with a custom release monitoring URL and a
+regexp matching an unconventional release file name (it's unconventional
+due to the use of upper case letter and the lack of a hyphen before the
+version string):
+
+@lisp
+(package
+  ;; @dots{}
+  (home-page "http://example.org/software/the-package.html")
+  (properties
+    `((release-monitoring-url . ,home-page)
+      (release-file-regexp . "ThePackage([0-9\\.]+)\\.tgz"))))
+@end lisp

@item generic-git
 a generic updater for packages hosted on Git repositories.  It tries to
@@ -15800,6 +15877,49 @@ Note that changes made by the @code{arguments} rule do not entail a
 rebuild of the affected packages.  Furthermore, if a package definition
 happens to be using G-expressions already, @command{guix style} leaves
 it unchanged.
+
+@item git-source
+If the @code{home-page} is a Git repository (as per
+@code{git-repository-url?}), and the actual Git repository is tagged
+with @code{version} or @code{(string-append ``v'' version)}, change the
+package origin to the @code{git-fetch} method
+(@pxref{origin Reference}).  Consider this example:
+
+@lisp
+(define-public guile-json-4
+  (package
+    (inherit guile-json-3)
+    (name "guile-json")
+    (version "4.7.3")
+    (source (origin
+              (method url-fetch)
+              (uri (string-append "mirror://savannah/guile-json/guile-json-"
+                                  version ".tar.gz"))
+              (sha256
+               (base32
+                "127k2xc07w1gnyqs40z4865l8p3ra5xgpcn569dz04lxsa709fiq"))))))
+@end lisp
+
+@noindent
+Running @command{guix style -S git-source} on this package would rewrite
+its @code{source} field like to:
+
+@lisp
+(define-public guile-json-4
+  (package
+    (inherit guile-json-3)
+    (name "guile-json")
+    (version "4.7.3")
+    (source (origin
+              (method git-fetch)
+              (uri (git-reference (url
+                                   "https://github.com/aconchillo/guile-json")
+                                  (commit version)))
+              (file-name (git-file-name name version))
+              (sha256 (base32
+                       "0akhm8xjv8fl55fyq0w6c9c6hi5j7mifjx01w07np7qg1cjl9f06"))))))
+@end lisp
+
@end table

@item --list-stylings
@@ -18376,7 +18496,7 @@ bits), @code{no-atime} (do not update file access times),
@code{no-diratime} (likewise for directories only),
@code{strict-atime} (update file access time), @code{lazy-time} (only
 update time on the in-memory version of the file inode),
-@code{no-exec} (disallow program execution), and @code{shared} (make the
+@code{no-exec} (disallow program execution), @code{remount} (remount a mounted file system), and @code{shared} (make the
 mount shared).
@xref{Mount-Unmount-Remount,,, libc, The GNU C Library Reference
 Manual}, for more information on these flags.
@@ -24647,8 +24767,8 @@ To ensure that upgrades are actually happening, you can run
 the unattended upgrade log file (see below).

@defvar unattended-upgrade-service-type
-This is the service type for unattended upgrades.  It sets up an mcron
-job (@pxref{Scheduled Job Execution}) that runs @command{guix system
+This is the service type for unattended upgrades.  It sets up a Shepherd
+Timer (@pxref{Scheduled Job Execution}) that runs @command{guix system
 reconfigure} from the latest version of the specified channels.

 Its value must be a @code{unattended-upgrade-configuration} record (see
@@ -26979,6 +27099,37 @@ The value for this service is a @code{<geoclue-configuration>} object.
@c TODO: Document <geoclue-configuration>, preferably by refactoring this to use
@c       define-configuration and generating documentation from it.

+@defvar iio-sensor-proxy-service-type
+Type for the service that runs
+@uref{https://gitlab.freedesktop.org/hadess/iio-sensor-proxy, IIO sensor
+proxy}, a daemon that proxies low-level sensor data from Industrial I/O
+(IIO) devices into a D-Bus interface.  It enables user-space
+applications, such as desktop environments like GNOME and KDE, and
+services like GeoClue, to access data from various sensors commonly
+found in devices like ultrabooks and 2-in-1s.  This allows for:
+
+@itemize @bullet
+@item
+Automatic screen rotation based on accelerometer data.
+@item
+Ambient brightness adjustment using light sensor data.
+@item
+Compass/direction information for location services (via GeoClue).
+@end itemize
+
+The value for this service is a @code{<iio-sensor-proxy-configuration>} object.
+@end defvar
+
+@deftp {Data Type} iio-sensor-proxy-configuration
+Data type representing the configuration for @code{iio-sensor-proxy-service-type}.
+
+@table @asis
+@item @code{iio-sensor-proxy} (default: @code{iio-sensor-proxy}) (type: file-like)
+Package object of iio-sensor-proxy.
+
+@end table
+@end deftp
+
@defvar bluetooth-service-type
 This is the type for the @uref{https://bluez.org/, Linux Bluetooth Protocol
 Stack} (BlueZ) system, which generates the @file{/etc/bluetooth/main.conf}
@@ -29752,6 +29903,7 @@ remote servers.  Run @command{man smtpd.conf} for more information.
@item @code{log-file} (default: @code{"/var/log/mail.log"})
 The file location for the OpenSMTPD log file.  Logging occurs in the
 foreground via the Shepherd, i.e. OpenSMTPD does not detach.
+When set to @code{#f} OpenSMTPD will instead detach and log to the syslog.

@item @code{setgid-commands?} (default: @code{#t})
 Make the following commands setgid to @code{smtpq} so they can be
@@ -31649,6 +31801,50 @@ Owner's group of the broker process.
@end table
@end deftp

+@subsubheading Mollysocket Service
+
+@url{https://github.com/mollyim/mollysocket,Mollysocket} is a UnifiedPush
+provider for the messaging app @url{https://molly.im,Molly}, a fork of Signal.
+
+@defvar mollysocket-service-type
+The Mollysocket service.  Takes @code{mollysocket-configuration} as its value.
+By default, this service listens on port 8020 for any Molly client.
+@end defvar
+
+@deftp {Data Type} mollysocket-configuration
+The configuration for Mollysocket, with the following fields:
+
+@table @asis
+@item @code{package} (default: @code{mollysocket})
+The Mollysocket package to use.
+
+@item @code{host} (default: @code{"0.0.0.0"})
+Address for the webserver to listen on. It is recommended that this be set to
+localhost, and instead configure a TLS-supporting reverse proxy in front of it.
+
+@item @code{port} (default: @code{8020})
+Port for the webserver to listen on.
+
+@item @code{webserver} (default: @code{#t})
+Whether the webserver sould be enabled. If disabled, the server is considered to
+be in airgapped mode, and clients must be configured likewise.
+
+@item @code{allowed-endpoints} (default: @code{'("*")})
+Allowlist of UnifiedPush distributor endpoints, represented as IP addresses or
+domain names. Addresses on the local network must be specified explicitly.
+
+@item @code{allowed-uuids} (default: @code{'("*")})
+Allowlist of Signal account UUIDs.
+
+@item @code{db} (default: @code{"/var/lib/mollysocket/db.sqlite"})
+Path to the Mollysocket database. Will be created if it doesn't exist.
+
+@item @code{vapid-key-file} (default: @code{"/var/lib/mollysocket/vapid.key"})
+Path to the VAPID key used to authorize requests to the UnifiedPush distributor.
+Will be created if it doesn't exist.
+@end table
+@end deftp
+
@node Telephony Services
@subsection Telephony Services

@@ -37590,6 +37786,251 @@ The verbosity level of the daemon.
@end table
@end deftp

+
+
+@subsubheading Autofs Service
+@cindex autofs
+@cindex automount
+
+The autofs service automatically mounts and unmounts filesystems.  It
+can mount both network and local storage, but is most often used to
+manage NFS mounts.
+
+A typical configuration might look like:
+
+@lisp
+(operating-system
+  (services
+   (append
+    (list
+     (service nfs-service-type (nfs-configuration))
+     (service autofs-service-type
+              (autofs-configuration
+               (mounts
+                (list
+                 (autofs-indirect-map
+                  (mount-point "/net/home")
+                  (entries
+                   (list
+                    ;; Accessing /net/home/foo will mount
+                    ;; big.network.server:/home/foo.
+                    (autofs-map-entry
+                     (type "nfs")
+                     (device "big.network.server:/home/&")
+                     (mount-point "*"))))))))))
+    %base-services)))
+@end lisp
+
+@deftp {Data Type} autofs-indirect-map
+Available @code{autofs-indirect-map} fields are:
+
+@table @asis
+@item @code{mount-point} (type: string)
+Where to mount the indirect map.
+
+@item @code{entries} (default: @code{()}) (type: autofs-map-entries)
+Entries in this map.
+
+@end table
+@end deftp
+
+@deftp {Data Type} autofs-map-entry
+Available @code{autofs-map-entry} fields are:
+
+@table @asis
+@item @code{type} (default: @code{"auto"}) (type: string)
+The type of the filesystem.
+
+@item @code{device} (type: string)
+Device or remote host to mount.  May contain special character @code{&},
+which can be referenced in the @var{mount-point} field.
+
+@item @code{mount-point} (type: string)
+Directory to mount this device on.  Map entries come in two flavors:
+direct and indirect.  Direct entries map a single device to a single
+mountpoint, while indirect entries can map multiple devices to multiple
+mountpoints.  A direct entry has a @var{mount-point} beginning with
+@code{/}, representing the absolute path of the directory to mount the
+device on.  For example:
+
+@lisp
+(autofs-map-entry
+ (type "ext4")
+ (device "/dev/sdb1")
+ (mount-point "/mnt/external-disk"))
+@end lisp
+
+An indirect entry has a @var{mount-point} not beginning with @code{/},
+representing the subdirectory within the parent indirect map for this
+entry.  Indirect maps may also use the special character @code{*}, which
+will be replaced with the value of special character @code{&} in the
+@var{device} field of this entry.  For example:
+
+@lisp
+(autofs-indirect-map
+ (mount-point "/devices")
+ (entries
+  (list
+   ;; Automount any block device r/o by ID.
+   (autofs-map-entry
+    (type "auto")
+    (mount-point "ro/uuid/*")
+    (device "/dev/disk/by-id/&")
+    (options '(ro)))
+   ;; Automount any block device by UUID.
+   (autofs-map-entry
+    (type "auto")
+    (mount-point "rw/uuid/*")
+    (device "/dev/disk/by-uuid/&")))))
+@end lisp
+
+@item @code{options} (default: @code{()}) (type: file-system-options)
+List of mount options.  Some options are simple flags, such as ro,
+noexec, nosuid, etc.  These may be expressed as strings or symbols.
+Other options also accept a value.  These are expressed as pairs of
+@code{(option .  value)}.  @code{option} may be a string or symbol, as
+with flags.  @code{value} may be a string, symbol, or number.  Example:
+@code{(ro (errors .  remount-ro) noexec)}
+
+@end table
+@end deftp
+
+@deftp {Data Type} autofs-configuration
+Available @code{autofs-configuration} fields are:
+
+@table @asis
+@item @code{autofs} (default: @code{autofs}) (type: package)
+The autofs package to use.
+
+@item @code{mounts} (default: @code{()}) (type: autofs-mount-maps)
+Mount maps to manage.  This is a list of either direct map entries or
+indirect mount maps.
+
+@item @code{timeout} (default: @code{300}) (type: conf-integer)
+Sets the default mount timeout in seconds.
+
+@item @code{master-wait} (default: @code{10}) (type: conf-integer)
+Sets the default maximum number of retries (actual iterations is half
+this, each is delayed by 2 seconds before retrying) waiting for the
+master map to become available if it cannot be read at program start.
+This can be longer if the map source itself waits for availability (such
+as sss).
+
+@item @code{negative-timeout} (default: @code{60}) (type: conf-integer)
+Set the default timeout for caching failed key lookups.
+
+@item @code{mount-verbose?} (default: @code{#f}) (type: conf-boolean)
+Use the verbose flag when spawning mount(8), and log some process info
+about the requestor and its parent.
+
+@item @code{mount-wait} (default: @code{-1}) (type: conf-integer)
+Set the default time to wait for a response from a spawned mount(8)
+before sending it a SIGTERM.  Note that we still need to wait for the
+RPC layer to timeout before the sub-process exits so this isn't ideal
+but it is the best we can do.  The default is to wait until mount(8)
+returns without intervention.
+
+@item @code{umount-wait} (default: @code{12}) (type: conf-integer)
+Set the default time to wait for a response from a spawned umount(8)
+before sending it a SIGTERM.  Note that we still need to wait for the
+RPC layer to timeout before the sub-process exits so this isn't ideal
+but it is the best we can do.
+
+@item @code{browse-mode?} (default: @code{#t}) (type: conf-boolean)
+Should maps be browsable by default?
+
+@item @code{mount-nfs-default-protocol} (default: @code{3}) (type: conf-integer)
+Set the default protocol that mount.nfs(8) uses when performing a mount.
+Autofs needs to know the default NFS protocol that mount.nfs(8) uses so
+it can do special case handling for its availability probe for different
+NFS protocols.  Since we can't identify this default automatically we
+need to set it in the autofs configuration.
+
+@item @code{append-options?} (default: @code{#t}) (type: conf-boolean)
+When #t, global options are appended to map entry options.  When #f, map
+entry options replace the global options.
+
+@item @code{logging} (type: conf-log-level)
+Default log level.  May be #:none, #:verbose, or #:debug.
+
+@item @code{force-standard-program-map-env?} (default: @code{#f}) (type: conf-boolean)
+Override the use of a prefix with standard environment variables when a
+program map is executed.  Since program maps are run as the privileged
+user setting these standard environment variables opens automount(8) to
+potential user privilege escalation when the program map is written in a
+language that can load components from, for example, a user home
+directory.
+
+@item @code{map-hash-table-size} (default: @code{1024}) (type: conf-integer)
+This configuration option may be used to change the number of hash table
+slots.  This configuration option affects the overhead of searching the
+map entry cache for map entries when there are a large number of
+entries.  It affects the number of entries that must be looked at to
+locate a map entry in the map entry cache.  For example, the default of
+1024 and a direct map with 8000 entries would result in each slot
+containing an average of 8 entries, which should be acceptable.  However,
+if excessive CPU usage is observed during automount lookups increasing
+this option can reduce the CPU overhead considerably because it reduces
+the length of the search chains.  Note that the number of entries in a
+map doesn't necessarily relate to the number of entries used in the map
+entry cache.  There are two distinct cases where the map hash table can
+make a significant difference, direct maps and indirect maps that use
+the "browse" option.  For indirect maps that do not use the "browse"
+option entries are added to the map entry cache at lookup so the number
+of active cache entries, in this case, is usually much less than the
+number of entries in the map.  In this last case it would be unusual for
+the map entry cache to grow large enough to warrant increasing the
+default before an event that cleans stale entries, a map re-read for
+example.
+
+@item @code{use-hostname-for-mounts?} (default: @code{#f}) (type: conf-boolean)
+NFS mounts where the host name resolves to more than one IP address are
+probed for availability and to establish the order in which mounts to
+them should be tried.  To ensure that mount attempts are made only to
+hosts that are responding and are tried in the order of hosts with the
+quickest response the IP address of the host needs to be used for the
+mount.  If it is necessary to use the hostname given in the map entry
+for the mount regardless, then set this option to #t.  Be aware that if
+this is done there is no defense against the host name resolving to one
+that isn't responding and while the number of attempts at a successful
+mount will correspond to the number of addresses the host name resolves
+to the order will also not correspond to fastest responding hosts.
+
+@item @code{disable-not-found-message?} (default: @code{#f}) (type: conf-boolean)
+The original request to add this log message needed it to be
+unconditional.  That produces, IMHO, unnecessary noise in the log so a
+configuration option has been added to provide the ability to turn it
+off.
+
+@item @code{use-ignore-mount-option?} (default: @code{#f}) (type: conf-boolean)
+An option to enable the use of autofs pseudo option "disable".  This
+option is used as a hint to user space that the mount entry should be
+omitted from mount table listings.  The default is #f to avoid
+unexpected changes in behaviour and so is an opt-in setting.
+
+@item @code{sss-master-map-wait} (default: @code{0}) (type: conf-integer)
+Set the time to wait and retry if sssd is unable to read the master map
+at program start.  Default is 0 (don't wait) or 10 if sss supports
+returning EHSTDOWN when the provider isn't available.  If the sss
+library upports returning EHOSTDOWN when the provider is down then this
+value is how long to wait between re‐ tries reading the master map.  When
+reading dependent maps or looking up a map key this value is multiplied
+by the number of retries that would be used when reading the master map.
+
+@item @code{use-mount-request-log-id?} (default: @code{#f}) (type: conf-boolean)
+Set whether to use a mount request log id so that log entries for
+specific mount requests can be easily identified in logs that have
+multiple concurrent requests.
+
+@end table
+
+@end deftp
+
+
+@c %end of fragment
+
+
+
@node Samba Services, Continuous Integration, Network File System, Services
@subsection Samba Services

@@ -38164,6 +38605,9 @@ as its configuration and access token.
@item @code{run-directory} (default: @code{"/var/run/forgejo-runner"})
 Directory where @command{forgejo-runner} stores cached data.

+@item @code{log-file} (default: @code{"/var/log/forgejo-runner.log"})
+Name of the @command{forgejo-runner} log file.
+
@end table
@end deftp

@@ -42711,6 +43155,10 @@ The location of the repositories.  Note that only public repositories will
 be shown by Gitile.  To make a repository public, add an empty
@file{git-daemon-export-ok} file at the root of that repository.

+@item @code{git-owner-validation?} (default: @code{#t})
+Whether to check for the service user's ownership of repositories.
+By default, Git will refuse to process a repository owned by another user.
+
@item @code{base-git-url}
 The base git url that will be used to show clone commands.

@@ -43491,6 +43939,12 @@ The port to bind the server to.
@item @code{host} (default: @code{"127.0.0.1"})
 The host to bind the server to.

+@item @code{control-port} (default: @code{8734})
+The port to bind the control server to.
+
+@item @code{control-host} (default: @code{"127.0.0.1"})
+The host to bind the control server to.
+
@item @code{mirror} (default: @code{#f})
 Optional URL of the other Nar Herder instance which should be mirrored.
 This means that this Nar Herder instance will download it's database,
@@ -47448,8 +47902,13 @@ The @option{--share} and @option{--expose} options can also be passed to
 the generated script to bind-mount additional directories into the
 container.

+The generated script also supports the @option{--pid-file} option to
+write the container process ID to a file. This can be used, along with
+@command{guix container exec} to execute scripts within the container
+(@pxref{Invoking guix container}).
+
@quotation Note
-This option requires Linux-libre 3.19 or newer.
+The @code{container} action requires Linux-libre 3.19 or newer.
@end quotation

@end table
@@ -50312,6 +50771,8 @@ Extend home-shell-profile service only if you really know what you do.
@subsubheading Bash Home Service

@anchor{home-bash-configuration}
+@c %start of fragment
+
@deftp {Data Type} home-bash-configuration
 Available @code{home-bash-configuration} fields are:

@@ -50326,13 +50787,19 @@ use Guix System, is it safe to set this to @code{#f}, as in this case
 this is already taken care of by the globally installed
@file{/etc/bashrc}.

-@item @code{environment-variables} (default: @code{'()}) (type: alist)
-Association list of environment variables to set for the Bash session.  The
-rules for the @code{home-environment-variables-service-type} apply
-here (@pxref{Essential Home Services}).  The contents of this field will be
-added after the contents of the @code{bash-profile} field.
+@item @code{environment-variables} (default: @code{()}) (type: alist)
+Association list of environment variables to set for the Bash session.
+The rules for the @code{home-environment-variables-service-type} apply
+here (@pxref{Essential Home Services}).  The contents of this field will
+be added after the contents of the @code{bash-profile} field.

-@item @code{aliases} (default: @code{%default-bash-aliases}) (type: alist)
+@item @code{variables} (default: @code{()}) (type: alist)
+Bash variables (not to be confused with environment variables) to be set
+in @file{.bashrc} for use by interactive shells.  A typical example of
+such variables is @code{HISTSIZE} and related history variables
+(@pxref{Bash Variables,,, bash,Bash Reference Manual}).
+
+@item @code{aliases} (type: alist)
 Association list of aliases to set for the Bash session.  The aliases
 will be defined after the contents of the @code{bashrc} field has been
 put in the @file{.bashrc} file.  The alias will automatically be quoted,
@@ -50348,27 +50815,31 @@ turns into
 alias ls="ls -alF"
@end example

-@item @code{bash-profile} (default: @code{'()}) (type: text-config)
+@item @code{bash-profile} (default: @code{()}) (type: text-config)
 List of file-like objects, which will be added to @file{.bash_profile}.
 Used for executing user's commands at start of login shell (In most
 cases the shell started on tty just after login).  @file{.bash_login}
 won't be ever read, because @file{.bash_profile} always present.

-@item @code{bashrc} (default: @code{'()}) (type: text-config)
+@item @code{bashrc} (default: @code{()}) (type: text-config)
 List of file-like objects, which will be added to @file{.bashrc}.  Used
 for executing user's commands at start of interactive shell (The shell
 for interactive usage started by typing @code{bash} or by terminal app
 or any other program).

-@item @code{bash-logout} (default: @code{'()}) (type: text-config)
+@item @code{bash-logout} (default: @code{()}) (type: text-config)
 List of file-like objects, which will be added to @file{.bash_logout}.
 Used for executing user's commands at the exit of login shell.  It won't
 be read in some cases (if the shell terminates by exec'ing another
 process for example).

@end table
+
@end deftp

+
+@c %end of fragment
+
 You can extend the Bash service by using the @code{home-bash-extension}
 configuration record, whose fields must mirror that of
@code{home-bash-configuration} (@pxref{home-bash-configuration}).  The
@@ -50378,14 +50849,14 @@ Bash Reference Manual}.

 For example, here is how you would define a service that extends the
 Bash service such that @file{~/.bash_profile} defines an additional
-environment variable, @env{PS1}:
+shell variable, @env{PS1}:

@lisp
 (define bash-fancy-prompt-service
  (simple-service 'bash-fancy-prompt
                  home-bash-service-type
                  (home-bash-extension
-                   (environment-variables
+                   (variables
                    '(("PS1" . "\\u \\wλ "))))))
@end lisp

@@ -50393,34 +50864,43 @@ You would then add @code{bash-fancy-prompt-service} to the list in the
@code{services} field of your @code{home-environment}.  The reference of
@code{home-bash-extension} follows.

+@c %start of fragment
+
@deftp {Data Type} home-bash-extension
 Available @code{home-bash-extension} fields are:

@table @asis
-@item @code{environment-variables} (default: @code{'()}) (type: alist)
-Additional environment variables to set.  These will be combined with the
-environment variables from other extensions and the base service to form one
-coherent block of environment variables.
+@item @code{environment-variables} (default: @code{()}) (type: alist)
+Additional environment variables to set.  These will be combined with
+the environment variables from other extensions and the base service to
+form one coherent block of environment variables.

-@item @code{aliases} (default: @code{'()}) (type: alist)
+@item @code{variables} (default: @code{()}) (type: alist)
+Extra Bash variables (not to be confused with environment variables) to
+be set in @file{.bashrc} for use by interactive shells.
+
+@item @code{aliases} (default: @code{()}) (type: alist)
 Additional aliases to set.  These will be combined with the aliases from
 other extensions and the base service.

-@item @code{bash-profile} (default: @code{'()}) (type: text-config)
-Additional text blocks to add to @file{.bash_profile}, which will be combined
-with text blocks from other extensions and the base service.
+@item @code{bash-profile} (default: @code{()}) (type: text-config)
+Additional text blocks to add to @file{.bash_profile}, which will be
+combined with text blocks from other extensions and the base service.

-@item @code{bashrc} (default: @code{'()}) (type: text-config)
+@item @code{bashrc} (default: @code{()}) (type: text-config)
 Additional text blocks to add to @file{.bashrc}, which will be combined
 with text blocks from other extensions and the base service.

-@item @code{bash-logout} (default: @code{'()}) (type: text-config)
-Additional text blocks to add to @file{.bash_logout}, which will be combined
-with text blocks from other extensions and the base service.
+@item @code{bash-logout} (default: @code{()}) (type: text-config)
+Additional text blocks to add to @file{.bash_logout}, which will be
+combined with text blocks from other extensions and the base service.

@end table
+
@end deftp

+@c %end of fragment
+
@subsubheading Zsh Home Service

@deftp {Data Type} home-zsh-configuration
@@ -13,8 +13,9 @@
            (service home-bash-service-type
                     (home-bash-configuration
                      (guix-defaults? #t)
-                      (bash-profile (list (plain-file "bash-profile" "\
-export HISTFILE=$XDG_CACHE_HOME/.bash_history")))))
+                      (variables
+                       `(("HISTFILE" . "$XDG_CACHE_HOME/.bash_history")
+                         ("HISTSIZE" . "50000")))))

            (simple-service 'test-config
                            home-xdg-configuration-files-service-type
@@ -283,15 +283,20 @@ corresponding to the top-level definition containing the staged changes."
  (define variable-name
    (second old))
  (define version
-    (and=> ((xpath:node-or
+    (match ((xpath:node-or
             (xpath:sxpath '(*any* *any* package version *any*))
             ;; For let binding
             (xpath:sxpath '(*any* *any* (*any*) package version *any*)))
            (cons '*TOP* new))
-           first))
-  (format port
-          "gnu: ~a: Update to ~a.~%~%* ~a (~a): Update to ~a.~%"
-          variable-name version file-name variable-name version)
+      (() #f)
+      ((version . rest) version)))
+  (if version
+      (format port
+              "gnu: ~a: Update to ~a.~%~%* ~a (~a): Update to ~a.~%"
+              variable-name version file-name variable-name version)
+      (format port
+              "gnu: ~a: Update.~%~%* ~a (~a): Update.~%"
+              variable-name file-name variable-name))
  (for-each (lambda (field)
              (let ((old-values (get-values old field))
                    (new-values (get-values new field)))
@@ -326,6 +326,12 @@ PARAMETERS."
       "members" user)
  => 204)

+(define-forgejo-request (remove-team-member team user)
+  "Remove USER (a string) from TEAM, a Forgejo team."
+  (DELETE "teams" (number->string (forgejo-team-id team))
+          "members" user)
+  => 204)
+
 (define-forgejo-request (repository-teams owner repository)
  "Return the list of teams assigned to REPOSITORY of OWNER."
  (GET "repos" owner repository "teams"
@@ -372,7 +378,8 @@ PARAMETERS."
              to-add)
    (for-each (lambda (user)
                (format log-port "removing '~a' from team '~a'~%"
-                        user (forgejo-team-name forgejo-team)))
+                        user (forgejo-team-name forgejo-team))
+                (remove-team-member token forgejo-team user))
              to-remove)))

 (define* (synchronize-team token team
@@ -457,6 +464,21 @@ already exists.  Lookup team IDs among CURRENT-TEAMS."
                      "gnu/packages/fluidplug.scm"
                      "gnu/packages/xiph.scm")))

+(define-team beam
+  (team 'beam
+        #:name "Erlang/Elixir/BEAM team"
+        #:description "The virtual machine at the core of the Erlang Open
+Telecom Platform (OTP), Erlang and Elxir languages and packages, development
+of Rebar and Mix build systems and Hex.pm importer."
+        #:scope (list (make-regexp* "^gnu/packages/elixir(-.+|)\\.scm$")
+                      "guix/build/mix-build-system.scm"
+                      "guix/build-system/mix.scm"
+                      (make-regexp* "^gnu/packages/erlang(-.+|)\\.scm$")
+                      "guix/build/rebar-build-system.scm"
+                      "guix/build-system/rebar.scm"
+                      "guix/import/hexpm.scm"
+                      "guix/scripts/import/hexpm.scm")))
+
 (define-team bootstrap
  (team 'bootstrap
        #:name "Bootstrap"
@@ -503,7 +525,6 @@ already exists.  Lookup team IDs among CURRENT-TEAMS."
              "guix/discovery.scm"
              "guix/docker.scm"
              "guix/download.scm"
-              "guix/elf.scm"
              "guix/ftp-client.scm"
              "guix/gexp.scm"
              "guix/git-authenticate.scm"
@@ -698,9 +719,10 @@ the haskell-build-system."

 (define-team hpc
  (team 'hpc
-        #:name "Hpc team"
-        #:description "High performance computing related packages."
+        #:name "High-performance computing team"
+        #:description "High-performance computing (HPC) related packages."
        #:scope (list "gnu/packages/mpi.scm"
+                      "gnu/packages/oneapi.scm"
                      "gnu/packages/rocm.scm"
                      "gnu/packages/sycl.scm"
                      "gnu/packages/tbb.scm"
@@ -933,6 +955,20 @@ release."
                      "guix/scripts/import/crate.scm"
                      "tests/import/crate.scm")))

+(define-team crypto
+  (team 'crypto
+        #:name "Crypto team"
+        #:description
+        "Secrets, passwords, cryptography and security related packages."
+        #:scope (list
+                 "gnu/packages/crypto.scm"
+                 "gnu/packages/gnupg.scm"
+                 "gnu/packages/nettle.scm"
+                 "gnu/packages/password-utils.scm"
+                 "gnu/packages/security-token.scm"
+                 "gnu/packages/ssh.scm"
+                 "gnu/packages/tls.scm")))
+
 (define-team science
  (team 'science
        #:name "Science team"
@@ -982,6 +1018,7 @@ packages (e.g. Astronomy, Chemistry, Math, Physics etc.)"
                      "gnu/packages/openstack.scm"
                      "gnu/packages/prometheus.scm"
                      "gnu/packages/rdesktop.scm"
+                      "gnu/packages/samba.scm"
                      "gnu/packages/selinux.scm"
                      "gnu/packages/storage.scm"
                      "gnu/packages/task-runners.scm"
@@ -1063,7 +1100,7 @@ the \"texlive\" importer."
 (define-member (person "Andreas Enge"
                       "andreas@enge.fr"
                       "enge")
-  bootstrap core-packages lxqt science tex)
+  bootstrap core-packages crypto lxqt science tex)

 (define-member (person "Tanguy Le Carrour"
                       "tanguy@bioneland.org"
@@ -1146,7 +1183,8 @@ the \"texlive\" importer."
  ocaml)

 (define-member (person "Josselin Poiret"
-                       "dev@jpoiret.xyz")
+                       "dev@jpoiret.xyz"
+                       "jpoiret")
  installer)

 (define-member (person "("
@@ -1154,7 +1192,8 @@ the \"texlive\" importer."
  )

 (define-member (person "Simon Tournier"
-                       "zimon.toutoune@gmail.com")
+                       "zimon.toutoune@gmail.com"
+                       "zimoun")
  julia core mentors r)

 (define-member (person "宋文武"
@@ -1178,7 +1217,8 @@ the \"texlive\" importer."
  core documentation electronics gnome qt telephony)

 (define-member (person "Katherine Cox-Buday"
-                       "cox.katherine.e+guix@gmail.com")
+                       "cox.katherine.e+guix@gmail.com"
+                       "katco")
  emacs go lisp)

 (define-member (person "Munyoki Kilyungi"
@@ -1225,7 +1265,8 @@ the \"texlive\" importer."
  games)

 (define-member (person "Laurent Gatto"
-                       "laurent.gatto@gmail.com")
+                       "laurent.gatto@gmail.com"
+                       "lgatto")
  r)

 (define-member (person "Nicolas Goaziou"
@@ -1266,7 +1307,7 @@ the \"texlive\" importer."
 (define-member (person "Cayetano Santos"
                       "csantosb@inventati.org"
                       "csantosb")
-  ai emacs electronics hpc)
+  ai emacs electronics hpc crypto)

 (define-member (person "Greg Hogan"
                       "code@greghogan.com"
@@ -1305,7 +1346,7 @@ the \"texlive\" importer."
 (define-member (person "Nicolas Graves"
                       "ngraves@ngraves.fr"
                       "nicolas-graves")
-  javascript python ruby)
+  core javascript python ruby)

 (define-member (person "Yelninei"
                       "yelninei@tutamail.com"
@@ -1315,7 +1356,7 @@ the \"texlive\" importer."
 (define-member (person "Giacomo Leidi"
                       "goodoldpaul@autistici.org"
                       "fishinthecalculator")
-  audio)
+  audio beam)

 (define-member (person "Saku Laesvuori"
                       "saku@laesvuori.fi"
@@ -1342,6 +1383,21 @@ the \"texlive\" importer."
                       "daym")
  bootstrap hpc rust science)

+(define-member (person "Andy Tai"
+                       "atai@atai.org"
+                       "atai")
+  ai)
+
+(define-member (person "Pierre-Henry Fröhring"
+                       "contact@phfrohring.com"
+                       "phfrohring")
+  beam)
+
+(define-member (person "Igorj Gorjaĉev"
+                       "igor@goryachev.org"
+                       "delitrem")
+  beam)
+

 (define (find-team name)
  (or (hash-ref %teams (string->symbol name))
@@ -0,0 +1,60 @@
+;;; GNU Guix --- Functional package management for GNU
+;;; Copyright © 2025 Giacomo Leidi <goodoldpaul@autistici.org>
+;;;
+;;; This file is part of GNU Guix.
+;;;
+;;; GNU Guix is free software; you can redistribute it and/or modify it
+;;; under the terms of the GNU General Public License as published by
+;;; the Free Software Foundation; either version 3 of the License, or (at
+;;; your option) any later version.
+;;;
+;;; GNU Guix is distributed in the hope that it will be useful, but
+;;; WITHOUT ANY WARRANTY; without even the implied warranty of
+;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+;;; GNU General Public License for more details.
+;;;
+;;; You should have received a copy of the GNU General Public License
+;;; along with GNU Guix.  If not, see <http://www.gnu.org/licenses/>.
+
+;;; This file returns a manifest of packages built using the mix-build-system.
+;;; It is used to assist continuous integration of the beam-team branch.
+;;;
+;;;
+;;; You can use it to build all covered packages with:
+;;;
+;;;  ./pre-inst-env guix build -m etc/teams/beam/elixir-manifest.scm
+;;;
+;;; or to update them with:
+;;;
+;;;  ./pre-inst-env guix refresh -u -m etc/teams/beam/elixir-manifest.scm
+
+(use-modules (guix packages)
+             (guix profiles)
+             (guix gexp)
+             (guix build-system)
+             (ice-9 match)
+             (srfi srfi-1)
+             (srfi srfi-26))
+
+(define* (has-mix-build-system? build-system #:key modules #:allow-other-keys)
+  (or (eq? (build-system-name build-system) 'mix)
+      (any
+       (match-lambda
+         (('guix 'build 'mix-build-system) #t)
+         ('((guix build mix-build-system) . _) #t)
+         (_ #f))
+       (cond
+        ((gexp? modules) (gexp->approximate-sexp modules))
+        ((pair? modules) modules)
+        (else '())))))
+
+(manifest
+  (map package->manifest-entry
+       (fold-packages
+        (lambda (package lst)
+          (if (apply has-mix-build-system?
+                     (package-build-system package)
+                     (package-arguments package))
+              (cons package lst)
+              lst))
+        (list))))
@@ -0,0 +1,60 @@
+;;; GNU Guix --- Functional package management for GNU
+;;; Copyright © 2025 Giacomo Leidi <goodoldpaul@autistici.org>
+;;;
+;;; This file is part of GNU Guix.
+;;;
+;;; GNU Guix is free software; you can redistribute it and/or modify it
+;;; under the terms of the GNU General Public License as published by
+;;; the Free Software Foundation; either version 3 of the License, or (at
+;;; your option) any later version.
+;;;
+;;; GNU Guix is distributed in the hope that it will be useful, but
+;;; WITHOUT ANY WARRANTY; without even the implied warranty of
+;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+;;; GNU General Public License for more details.
+;;;
+;;; You should have received a copy of the GNU General Public License
+;;; along with GNU Guix.  If not, see <http://www.gnu.org/licenses/>.
+
+;;; This file returns a manifest of packages built using the rebar-build-system.
+;;; It is used to assist continuous integration of the beam-team branch.
+;;;
+;;;
+;;; You can use it to build all covered packages with:
+;;;
+;;;  ./pre-inst-env guix build -m etc/teams/beam/erlang-manifest.scm
+;;;
+;;; or to update them with:
+;;;
+;;;  ./pre-inst-env guix refresh -u -m etc/teams/beam/erlang-manifest.scm
+
+(use-modules (guix packages)
+             (guix profiles)
+             (guix gexp)
+             (guix build-system)
+             (ice-9 match)
+             (srfi srfi-1)
+             (srfi srfi-26))
+
+(define* (has-rebar-build-system? build-system #:key modules #:allow-other-keys)
+  (or (eq? (build-system-name build-system) 'rebar)
+      (any
+       (match-lambda
+         (('guix 'build 'rebar-build-system) #t)
+         ('((guix build rebar-build-system) . _) #t)
+         (_ #f))
+       (cond
+        ((gexp? modules) (gexp->approximate-sexp modules))
+        ((pair? modules) modules)
+        (else '())))))
+
+(manifest
+  (map package->manifest-entry
+       (fold-packages
+        (lambda (package lst)
+          (if (apply has-rebar-build-system?
+                     (package-build-system package)
+                     (package-arguments package))
+              (cons package lst)
+              lst))
+        (list))))
@@ -0,0 +1,48 @@
+;;; GNU Guix --- Functional package management for GNU
+;;; Copyright © 2025 Simon Tournier <zimon.toutoune@gmail.com>
+;;;
+;;; This file is part of GNU Guix.
+;;;
+;;; GNU Guix is free software; you can redistribute it and/or modify it
+;;; under the terms of the GNU General Public License as published by
+;;; the Free Software Foundation; either version 3 of the License, or (at
+;;; your option) any later version.
+;;;
+;;; GNU Guix is distributed in the hope that it will be useful, but
+;;; WITHOUT ANY WARRANTY; without even the implied warranty of
+;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+;;; GNU General Public License for more details.
+;;;
+;;; You should have received a copy of the GNU General Public License
+;;; along with GNU Guix.  If not, see <http://www.gnu.org/licenses/>.
+
+(use-modules (guix packages)
+             (guix profiles)
+             (guix gexp)
+             (guix build-system)
+             (ice-9 match)
+             (srfi srfi-1)
+             (srfi srfi-26))
+
+(define* (has-r-build-system? build-system #:key modules #:allow-other-keys)
+  (or (eq? (build-system-name build-system) 'r)
+      (any
+       (match-lambda
+         (('guix 'build 'r-build-system) #t)
+         ('((guix build r-build-system) . _) #t)
+         (_ #f))
+       (cond
+        ((gexp? modules) (gexp->approximate-sexp modules))
+        ((pair? modules) modules)
+        (else '())))))
+
+(manifest
+  (map package->manifest-entry
+       (fold-packages
+        (lambda (package lst)
+          (if (apply has-r-build-system?
+                     (package-build-system package)
+                     (package-arguments package))
+              (cons package lst)
+              lst))
+        (list))))
@@ -7,6 +7,7 @@
 ;;; Copyright © 2023 Efraim Flashner <efraim@flashner.co.il>
 ;;; Copyright © 2023-2024 Herman Rimm <herman@rimm.ee>
 ;;; Copyright © 2024 Zheng Junjie <873216071@qq.com>
+;;; Copyright © 2025 dan <i@dan.games>
 ;;;
 ;;; This file is part of GNU Guix.
 ;;;
@@ -46,6 +47,7 @@
            u-boot-pine64-lts-bootloader
            u-boot-pinebook-bootloader
            u-boot-pinebook-pro-rk3399-bootloader
+            u-boot-nanopi-r4s-rk3399-bootloader
            u-boot-puma-rk3399-bootloader
            u-boot-rock-4c-plus-rk3399-bootloader
            u-boot-rock64-rk3328-bootloader
@@ -273,6 +275,11 @@ is BLOCK-SIZE * COUNT, or FILE size if COUNT is not given."
   (inherit u-boot-rockchip-bootloader)
   (package u-boot-pinebook-pro-rk3399)))

+(define u-boot-nanopi-r4s-rk3399-bootloader
+  (bootloader
+   (inherit u-boot-rockchip-bootloader)
+   (package u-boot-nanopi-r4s-rk3399)))
+
 (define u-boot-ts7970-q-2g-1000mhz-c-bootloader
  ;; This bootloader doesn't really need to be installed, as it is read from
  ;; an SPI memory chip, not the SD card.  It is copied to /boot/u-boot.imx
@@ -1312,6 +1312,8 @@ corresponds to the symbols listed in FLAGS."
       (logior MS_STRICTATIME (loop rest)))
      (('lazy-time rest ...)
       (logior MS_LAZYTIME (loop rest)))
+      (('remount rest ...)
+       (logior MS_REMOUNT (loop rest)))
      (('shared rest ...)
       (loop rest))
      (()
@@ -190,7 +190,10 @@ for the process."
      (remount-read-only "/"))))

 (define* (initialize-user-namespace pid host-uids
-                                    #:key (guest-uid 0) (guest-gid 0))
+                                    #:key
+                                    (host-uid (getuid))
+                                    (host-gid (getgid))
+                                    (guest-uid 0) (guest-gid 0))
  "Configure the user namespace for PID.  HOST-UIDS specifies the number of
 host user identifiers to map into the user namespace.  GUEST-UID and GUEST-GID
 specify the first UID (respectively GID) that host UIDs (respectively GIDs)
@@ -201,24 +204,21 @@ map to in the namespace."
  (define (scope file)
    (string-append proc-dir file))

-  (let ((uid (getuid))
-        (gid (getgid)))
-
-    ;; Only root can write to the gid map without first disabling the
-    ;; setgroups syscall.
-    (unless (and (zero? uid) (zero? gid))
-      (call-with-output-file (scope "/setgroups")
-        (lambda (port)
-          (display "deny" port))))
-
-    ;; Map the user/group that created the container to the root user
-    ;; within the container.
-    (call-with-output-file (scope "/uid_map")
+  ;; Only root can write to the gid map without first disabling the
+  ;; setgroups syscall.
+  (unless (and (zero? host-uid) (zero? host-gid))
+    (call-with-output-file (scope "/setgroups")
      (lambda (port)
-        (format port "~d ~d ~d" guest-uid uid host-uids)))
-    (call-with-output-file (scope "/gid_map")
-      (lambda (port)
-        (format port "~d ~d ~d" guest-gid gid host-uids)))))
+        (display "deny" port))))
+
+  ;; Map the user/group that created the container to the root user
+  ;; within the container.
+  (call-with-output-file (scope "/uid_map")
+    (lambda (port)
+      (format port "~d ~d ~d" guest-uid host-uid host-uids)))
+  (call-with-output-file (scope "/gid_map")
+    (lambda (port)
+      (format port "~d ~d ~d" guest-gid host-gid host-uids))))

 (define (namespaces->bit-mask namespaces)
  "Return the number suitable for the 'flags' argument of 'clone' that
@@ -239,12 +239,14 @@ corresponds to the symbols in NAMESPACES."
                        #:key (guest-uid 0) (guest-gid 0)
                        (populate-file-system (const #t))
                        (loopback-network? #t)
+                        (lock-mounts? #t)
                        writable-root?)
  "Run THUNK in a new container process and return its PID.  ROOT specifies
 the root directory for the container.  MOUNTS is a list of <file-system>
 objects that specify file systems to mount inside the container.  NAMESPACES
 is a list of symbols that correspond to the possible Linux namespaces: mnt,
-ipc, uts, user, and net.
+ipc, uts, user, and net.  When LOCK-MOUNTS? is true, arrange so that none of
+MOUNTS can be unmounted or remounted individually from within THUNK.

 When LOOPBACK-NETWORK? is true and 'net is amount NAMESPACES, set up the
 loopback device (\"lo\") and a minimal /etc/hosts.
@@ -261,75 +263,93 @@ that host UIDs (respectively GIDs) map to in the namespace."
  ;; child process blocks until the parent writes to it.
  (match (socketpair PF_UNIX (logior SOCK_CLOEXEC SOCK_STREAM) 0)
    ((child . parent)
-     (let ((flags (namespaces->bit-mask namespaces)))
-       (match (clone flags)
-         (0
-          (call-with-clean-exit
-           (lambda ()
-             (close-port parent)
-             ;; Wait for parent to set things up.
-             (match (read child)
-               ('ready
-                (purify-environment)
-                (when (and (memq 'mnt namespaces)
-                           (not (string=? root "/")))
-                  (catch #t
-                    (lambda ()
-                      (mount-file-systems root mounts
-                                          #:mount-/proc? (memq 'pid namespaces)
-                                          #:mount-/sys?  (memq 'net
-                                                               namespaces)
-                                          #:populate-file-system
-                                          (lambda ()
-                                            (populate-file-system)
-                                            (when (and (memq 'net namespaces)
-                                                       loopback-network?)
-                                              (set-network-interface-up "lo")
+     (safe-clone
+      (namespaces->bit-mask namespaces)
+      (lambda ()
+        (call-with-clean-exit
+         (lambda ()
+           (close-port parent)
+           ;; Wait for parent to set things up.
+           (match (read child)
+             ('ready
+              (purify-environment)
+              (when (and (memq 'mnt namespaces)
+                         (not (string=? root "/")))
+                (catch #t
+                  (lambda ()
+                    (mount-file-systems root mounts
+                                        #:mount-/proc? (memq 'pid namespaces)
+                                        #:mount-/sys?  (memq 'net
+                                                             namespaces)
+                                        #:populate-file-system
+                                        (lambda ()
+                                          (populate-file-system)
+                                          (when (and (memq 'net namespaces)
+                                                     loopback-network?)
+                                            (set-network-interface-up "lo")

-                                              ;; When isolated from the
-                                              ;; network, provide a minimal
-                                              ;; /etc/hosts to resolve
-                                              ;; "localhost".
-                                              (mkdir-p "/etc")
-                                              (call-with-output-file "/etc/hosts"
-                                                (lambda (port)
-                                                  (display "127.0.0.1 localhost\n" port)
-                                                  (chmod port #o444)))))
-                                          #:writable-root?
-                                          (or writable-root?
-                                              (not (memq 'mnt namespaces)))))
-                    (lambda args
-                      ;; Forward the exception to the parent process.
-                      ;; FIXME: SRFI-35 conditions and non-trivial objects
-                      ;; cannot be 'read' so they shouldn't be written as is.
-                      (write args child)
-                      (primitive-exit 3))))
-                ;; TODO: Manage capabilities.
-                (write 'ready child)
-                (close-port child)
-                (thunk))
-               (_                                 ;parent died or something
-                (primitive-exit 2))))))
-         (pid
-          (close-port child)
-          (when (memq 'user namespaces)
-            (initialize-user-namespace pid host-uids
-                                       #:guest-uid guest-uid
-                                       #:guest-gid guest-gid))
-          ;; TODO: Initialize cgroups.
-          (write 'ready parent)
-          (newline parent)
+                                            ;; When isolated from the
+                                            ;; network, provide a minimal
+                                            ;; /etc/hosts to resolve
+                                            ;; "localhost".
+                                            (mkdir-p "/etc")
+                                            (call-with-output-file "/etc/hosts"
+                                              (lambda (port)
+                                                (display "127.0.0.1 localhost\n" port)
+                                                (chmod port #o444)))))
+                                        #:writable-root?
+                                        (or writable-root?
+                                            (not (memq 'mnt namespaces)))))
+                  (lambda args
+                    ;; Forward the exception to the parent process.
+                    ;; FIXME: SRFI-35 conditions and non-trivial objects
+                    ;; cannot be 'read' so they shouldn't be written as is.
+                    (write args child)
+                    (primitive-exit 3))))

-          ;; Check whether the child process' setup phase succeeded.
-          (let ((message (read parent)))
-            (close-port parent)
-            (match message
-              ('ready                             ;success
-               pid)
-              (((? symbol? key) args ...)         ;exception
-               (apply throw key args))
-              (_                                  ;unexpected termination
-               #f)))))))))
+              (when (and lock-mounts?
+                         (memq 'mnt namespaces)
+                         (memq 'user namespaces))
+                ;; Create a new mount namespace owned by a new user
+                ;; namespace to "lock" together previous mounts, such that
+                ;; they cannot be unmounted or remounted separately--see
+                ;; mount_namespaces(7).
+                (let ((uid (getuid)) (gid (getgid)))
+                  (unshare (logior CLONE_NEWUSER CLONE_NEWNS))
+                  (when (file-exists? "/proc/self")
+                    (initialize-user-namespace (getpid)
+                                               host-uids
+                                               #:host-uid uid
+                                               #:host-gid gid
+                                               #:guest-uid guest-uid
+                                               #:guest-gid guest-gid))))
+
+              ;; TODO: Manage capabilities.
+              (write 'ready child)
+              (close-port child)
+              (thunk))
+             (_                         ;parent died or something
+              (primitive-exit 2))))))
+      (lambda (pid)
+        (close-port child)
+        (when (memq 'user namespaces)
+          (initialize-user-namespace pid host-uids
+                                     #:guest-uid guest-uid
+                                     #:guest-gid guest-gid))
+        ;; TODO: Initialize cgroups.
+        (write 'ready parent)
+        (newline parent)
+
+        ;; Check whether the child process' setup phase succeeded.
+        (let ((message (read parent)))
+          (close-port parent)
+          (match message
+            ('ready                     ;success
+             pid)
+            (((? symbol? key) args ...) ;exception
+             (apply throw key args))
+            (_                          ;unexpected termination
+             #f))))))))

 ;; FIXME: This is copied from (guix utils), which we cannot use because it
 ;; would pull (guix config) and all.
@@ -376,6 +396,7 @@ if there are no child processes left."

 (define* (call-with-container mounts thunk #:key (namespaces %namespaces)
                              (host-uids 1) (guest-uid 0) (guest-gid 0)
+                              (lock-mounts? #t)
                              (relayed-signals (list SIGINT SIGTERM))
                              (child-is-pid1? #t)
                              (populate-file-system (const #t))
@@ -460,6 +481,7 @@ load path must be adjusted as needed."
  (call-with-temporary-directory
   (lambda (root)
     (let ((pid (run-container root mounts namespaces host-uids thunk*
+                               #:lock-mounts? lock-mounts?
                               #:guest-uid guest-uid
                               #:guest-gid guest-gid
                               #:populate-file-system populate-file-system
@@ -480,24 +502,35 @@ return the exit status, an integer as returned by 'waitpid'."
    (0
     (call-with-clean-exit
      (lambda ()
-        (for-each (lambda (ns)
-                    (let ((source (namespace-file (getpid) ns))
-                          (target (namespace-file pid ns)))
-                      ;; Joining the namespace that the process already
-                      ;; belongs to would throw an error so avoid that.
-                      ;; XXX: This /proc interface leads to TOCTTOU.
-                      (unless (string=? (readlink source) (readlink target))
-                        (call-with-input-file source
-                          (lambda (current-ns-port)
-                            (call-with-input-file target
-                              (lambda (new-ns-port)
-                                (setns (fileno new-ns-port) 0))))))))
-                  ;; It's important that the user namespace is joined first,
-                  ;; so that the user will have the privileges to join the
-                  ;; other namespaces.  Furthermore, it's important that the
-                  ;; mount namespace is joined last, otherwise the /proc mount
-                  ;; point would no longer be accessible.
-                  '("user" "ipc" "uts" "net" "pid" "mnt"))
+        ;; First, determine the user namespace that owns the pid namespace and
+        ;; join that user namespace (the assumption is that it also owns all
+        ;; the other namespaces).  It's important that the user namespace is
+        ;; joined first, so that the user will have the privileges to join the
+        ;; other namespaces.
+        (let* ((pid-ns (open-fdes (namespace-file pid "pid")
+                                  (logior O_CLOEXEC O_RDONLY)))
+               (user-ns (get-user-ns pid-ns)))
+          (close-fdes pid-ns)
+          (unless (equal? (stat user-ns)
+                          (stat (namespace-file (getpid) "user")))
+            (setns user-ns 0))
+          (close-fdes user-ns)
+
+          ;; Then join all the remaining namespaces.
+          (for-each (lambda (ns)
+                      (let ((source (namespace-file (getpid) ns))
+                            (target (namespace-file pid ns)))
+                        ;; Joining the namespace that the process already
+                        ;; belongs to would throw an error so avoid that.
+                        ;; XXX: This /proc interface leads to TOCTTOU.
+                        (unless (string=? (readlink source) (readlink target))
+                          (call-with-input-file target
+                            (lambda (new-ns-port)
+                              (setns (fileno new-ns-port) 0))))))
+                    ;; It's important that the mount namespace is joined last,
+                    ;; otherwise the /proc mount point would no longer be
+                    ;; accessible.
+                    '("ipc" "uts" "net" "pid" "mnt")))
        (purify-environment)
        (chdir "/")

@@ -21,7 +21,6 @@
 ;;; along with GNU Guix.  If not, see <http://www.gnu.org/licenses/>.

 (define-module (gnu build linux-modules)
-  #:use-module (guix elf)
  #:use-module (guix glob)
  #:use-module (guix build syscalls)
  #:use-module ((guix build utils) #:select (find-files invoke))
@@ -39,6 +38,7 @@
  #:use-module (ice-9 match)
  #:use-module (ice-9 rdelim)
  #:autoload   (ice-9 pretty-print) (pretty-print)
+  #:use-module (system vm elf)
  #:export (dot-ko
            ensure-dot-ko
            module-formal-name
@@ -1,7 +1,7 @@
 ;;; GNU Guix --- Functional package management for GNU
 ;;; Copyright © 2021-2023 Andrew Tropin <andrew@trop.in>
 ;;; Copyright © 2021 Xinglu Chen <public@yoctocell.xyz>
-;;; Copyright © 2022-2023 Ludovic Courtès <ludo@gnu.org>
+;;; Copyright © 2022-2023, 2025 Ludovic Courtès <ludo@gnu.org>
 ;;; Copyright © 2023 Carlo Zancanaro <carlo@zancanaro.id.au>
 ;;;
 ;;; This file is part of GNU Guix.
@@ -58,6 +58,7 @@

            with-shell-quotation-bindings
            environment-variable-shell-definitions
+            shell-variable-definitions
            home-files-directory
            xdg-configuration-files-directory
            xdg-data-files-directory
@@ -241,6 +242,27 @@ ensures variable values are properly quoted."
                                  "\n")))
              variables))))

+(define (shell-variable-definitions variables)
+  "Return a gexp that evaluates to a list of POSIX shell statements defining
+VARIABLES, a list of variable name/value pairs, as shell variables (not
+environment variables).  The returned code ensures variable values are
+properly quoted."
+  (with-shell-quotation-bindings
+   #~(string-append
+      #$@(map (match-lambda
+                ((key . (or (? string? value)
+                            (? file-like? value)
+                            (? gexp? value)))
+                 #~(string-append #$key "="
+                                  (shell-double-quote #$value)
+                                  "\n"))
+                ((key . (? literal-string? value))
+                 #~(string-append #$key "="
+                                  (shell-single-quote
+                                   #$(literal-string-value value))
+                                  "\n")))
+              variables))))
+
 (define (environment-variables->setup-environment-script vars)
  "Return a file that can be sourced by a POSIX compliant shell which
 initializes the environment.  The file will source the home
@@ -23,6 +23,7 @@
  #:use-module (gnu packages freedesktop)
  #:use-module (gnu packages glib)
  #:use-module (gnu packages gnome)
+  #:use-module (gnu packages xorg)
  #:use-module (gnu packages wm)
  #:use-module (gnu services)
  #:use-module (gnu services shepherd)
@@ -71,7 +72,8 @@ environment variables set for a Wayland desktop session."
                                     niri
                                     xdg-desktop-portal
                                     xdg-desktop-portal-gnome
-                                     xdg-desktop-portal-gtk)))))
+                                     xdg-desktop-portal-gtk
+                                     xwayland-satellite)))))
   (description "Install and configure Niri, a scrollable tiling Wayland
 compositor.  This service starts Niri as a user-level desktop session with
 proper environment variables set for Wayland compatibility.  It ensures Niri
@@ -2,6 +2,7 @@
 ;;; Copyright © 2021 Andrew Tropin <andrew@trop.in>
 ;;; Copyright © 2021 Xinglu Chen <public@yoctocell.xyz>
 ;;; Copyright © 2023 Efraim Flashner <efraim@flashner.co.il>
+;;; Copyright © 2025 Ludovic Courtès <ludo@gnu.org>
 ;;;
 ;;; This file is part of GNU Guix.
 ;;;
@@ -121,6 +122,9 @@ service type can be extended with a list of file-like objects.")))
 (define (serialize-posix-env-vars field-name val)
  (environment-variable-shell-definitions val))

+(define (serialize-shell-variables field value)
+  (shell-variable-definitions value))
+

 ;;;
 ;;; Zsh.
@@ -347,6 +351,13 @@ rules for the @code{home-environment-variables-service-type} apply
 here (@pxref{Essential Home Services}).  The contents of this field will be
 added after the contents of the @code{bash-profile} field."
   (serializer serialize-posix-env-vars))
+  (variables
+   (alist '())
+   "Bash variables (not to be confused with environment variables) to be set
+in @file{.bashrc} for use by interactive shells.  A typical example of such
+variables is @code{HISTSIZE} and related history variables (@pxref{Bash
+Variables,,, bash, Bash Reference Manual})."
+   (serializer serialize-shell-variables))
  (aliases
   (alist %default-bash-aliases)
   "Association list of aliases to set for the Bash session.  The aliases will be
@@ -425,10 +436,12 @@ if [ -f ~/.bashrc ]; then source ~/.bashrc; fi

     ,@(list (file-if-not-empty
              'bashrc
-              (if (home-bash-configuration-guix-defaults? config)
-                  (list (plain-file-content %default-bashrc) "\n"
-                        (serialize-field 'aliases))
-                  (list (serialize-field 'aliases))))
+              (let ((user-settings (list (serialize-field 'variables) "\n"
+                                         (serialize-field 'aliases))))
+                (if (home-bash-configuration-guix-defaults? config)
+                    (cons* (plain-file-content %default-bashrc) "\n"
+                           user-settings)
+                    user-settings)))
             (file-if-not-empty 'bash-logout)))))

 (define (add-bash-packages config)
@@ -440,6 +453,10 @@ if [ -f ~/.bashrc ]; then source ~/.bashrc; fi
   "Additional environment variables to set.  These will be combined with the
 environment variables from other extensions and the base service to form one
 coherent block of environment variables.")
+  (variables
+   (alist '())
+   "Extra Bash variables (not to be confused with environment variables) to be
+set in @file{.bashrc} for use by interactive shells.")
  (aliases
   (alist '())
   "Additional aliases to set.  These will be combined with the aliases from
@@ -459,13 +476,17 @@ with text blocks from other extensions and the base service."))

 (define (home-bash-extensions original-config extension-configs)
  (match-record original-config <home-bash-configuration>
-    (environment-variables aliases bash-profile bashrc bash-logout)
+    (environment-variables variables aliases bash-profile bashrc bash-logout)
    (home-bash-configuration
     (inherit original-config)
     (environment-variables
      (append environment-variables
              (append-map
               home-bash-extension-environment-variables extension-configs)))
+     (variables
+      (append variables
+              (append-map
+               home-bash-extension-variables extension-configs)))
     (aliases
      (append aliases
              (append-map
@@ -220,6 +220,11 @@ or #f.  Return #t on success and #f on failure."

             (setenv "PATH" "/run/current-system/profile/bin/")

+             (for-each (lambda (line)
+                         (installer-log-line "~a" line))
+                       (with-input-from-file (%installer-configuration-file)
+                         read-lines))
+
             (set! ret (run-command install-command #:tty? #t)))
           (lambda ()
             ;; Stop guix-daemon so that it does no keep the MNT namespace
@@ -168,10 +168,12 @@ Do you want to continue anyway?"))
 (define (check-substitute-availability)
  "Check that at least one of the Guix substitute servers is available."
  (define (substitutes-available?)
-    (common-urls-alive?
-     (list
-      "https://bordeaux.guix.gnu.org/nix-cache-info"
-      "https://ci.guix.gnu.org/nix-cache-info")))
+    (or
+     (file-exists? "/tmp/installer-assume-online")
+     (common-urls-alive?
+      (list
+       "https://bordeaux.guix.gnu.org/nix-cache-info"
+       "https://ci.guix.gnu.org/nix-cache-info"))))

  (let* ((full-value 5))
    (run-scale-page
@@ -5,6 +5,8 @@
 ;;; Copyright © 2021 Tobias Geerinckx-Rice <me@tobias.gr>
 ;;; Copyright © 2021 Leo Famulari <leo@famulari.name>
 ;;; Copyright © 2023 Denys Nykula <vegan@libre.net.ua>
+;;; Copyright © 2025 Florian Pelz <pelzflorian@pelzflorian.de>
+;;; Copyright © 2025 Fredrik Salomonsson <plattfot@posteo.net>
 ;;;
 ;;; This file is part of GNU Guix.
 ;;;
@@ -80,9 +82,12 @@
     (desktop-environment
      (name "MATE")
      (snippet '((service mate-desktop-service-type))))
+     (desktop-environment
+      (name "KDE Plasma")
+      (snippet '((service plasma-desktop-service-type))))
     (desktop-environment
      (name "Icewm")
-      (snippet '((specification->package "icewm"))))
+      (packages '((specification->package "icewm"))))
     (desktop-environment
      (name "Openbox")
      (packages '((specification->package "openbox"))))
@@ -103,6 +108,11 @@
      (packages '((specification->package "emacs")
                  (specification->package "emacs-exwm")
                  (specification->package "emacs-desktop-environment"))))
+     (desktop-environment
+      (name "Sway")
+      (packages (map (lambda (package)
+                       `(specification->package ,package))
+                     '("sway" "wmenu" "foot"))))

     ;; Networking.
     (system-service
@@ -194,8 +204,11 @@
                       (if (target-hurd?)
                           '%base-services/hurd
                           '%base-services)))
-         (native-console-font (match (getenv "LANGUAGE")
-                                ((or "be" "bg" "el" "eo" "kk" "ky"
+         (native-console-font (match (false-if-exception
+                                      (string-take (getenv "LANGUAGE") 2))
+                                ((or "el" ;easier with more complete Greek font
+                                     ;; These need Cyrillic:
+                                     "be" "bg" "kk" "ky"
                                     "mk" "mn" "ru" "sr" "tg" "uk")
                                 "LatGrkCyr-8x16")
                                (_ #f)))
@@ -72,6 +72,7 @@
 # Copyright © 2024 Ashvith Shetty <ashvithshetty10@gmail.com>
 # Copyright © 2024 James Smith <jsubuntuxp@disroot.org>
 # Copyright © 2025 Nigko Yerden <nigko.yerden@gmail.com>
+# Copyright © 2025 Cayetano Santos <csantosb@inventati.org>
 #
 # This file is part of GNU Guix.
 #
@@ -186,7 +187,6 @@ GNU_SYSTEM_MODULES =				\
  %D%/packages/calcurse.scm			\
  %D%/packages/ccache.scm			\
  %D%/packages/cdrom.scm			\
-  %D%/packages/cedille.scm			\
  %D%/packages/certs.scm			\
  %D%/packages/check.scm			\
  %D%/packages/chemistry.scm			\
@@ -253,6 +253,7 @@ GNU_SYSTEM_MODULES =				\
  %D%/packages/docker.scm			\
  %D%/packages/documentation.scm		\
  %D%/packages/dpdk.scm        \
+  %D%/packages/duckdb.scm			\
  %D%/packages/dvtm.scm				\
  %D%/packages/easyrpg.scm			\
  %D%/packages/ebook.scm			\
@@ -298,10 +299,8 @@ GNU_SYSTEM_MODULES =				\
  %D%/packages/fortran-xyz.scm			\
  %D%/packages/freedesktop.scm			\
  %D%/packages/freeipmi.scm			\
-  %D%/packages/fsf.scm				\
  %D%/packages/ftp.scm				\
  %D%/packages/fribidi.scm			\
-  %D%/packages/fvwm.scm				\
  %D%/packages/gambas.scm			\
  %D%/packages/game-development.scm		\
  %D%/packages/games.scm			\
@@ -610,7 +609,6 @@ GNU_SYSTEM_MODULES =				\
  %D%/packages/rust-sources.scm			\
  %D%/packages/samba.scm			\
  %D%/packages/sagemath.scm			\
-  %D%/packages/sawfish.scm			\
  %D%/packages/scanner.scm			\
  %D%/packages/scheme.scm			\
  %D%/packages/spreadsheet.scm			\
@@ -649,6 +647,7 @@ GNU_SYSTEM_MODULES =				\
  %D%/packages/storage.scm			\
  %D%/packages/suckless.scm			\
  %D%/packages/sugar.scm			\
+  %D%/packages/swift.scm			\
  %D%/packages/swig.scm				\
  %D%/packages/sycl.scm				\
  %D%/packages/sync.scm			\
@@ -683,6 +682,7 @@ GNU_SYSTEM_MODULES =				\
  %D%/packages/upnp.scm				\
  %D%/packages/usb-modeswitch.scm		\
  %D%/packages/uucp.scm				\
+  %D%/packages/oneapi.scm			\
  %D%/packages/valgrind.scm			\
  %D%/packages/version-control.scm		\
  %D%/packages/video.scm			\
@@ -955,6 +955,7 @@ MODULES_NOT_COMPILED +=				\

 patchdir = $(guilemoduledir)/%D%/packages/patches
 dist_patch_DATA =						\
+  %D%/packages/patches/389-ds-base-legacy-version.patch		\
  %D%/packages/patches/8mq-enable-imx_hab_handler.patch		\
  %D%/packages/patches/8mq-move-stack-to-ocram_s.patch		\
  %D%/packages/patches/abcl-fix-build-xml.patch	\
@@ -1077,6 +1078,7 @@ dist_patch_DATA =						\
  %D%/packages/patches/capnproto-fix-test.patch		\
  %D%/packages/patches/capstone-fix-python-constants.patch	\
  %D%/packages/patches/catdoc-CVE-2017-11110.patch		\
+  %D%/packages/patches/chez-irregex-import-cond-expand.patch	\
  %D%/packages/patches/chez-scheme-bin-sh.patch			\
  %D%/packages/patches/circos-remove-findbin.patch		\
  %D%/packages/patches/cdparanoia-fpic.patch			\
@@ -1100,6 +1102,7 @@ dist_patch_DATA =						\
  %D%/packages/patches/clang-16-remove-crypt-interceptors.patch	\
  %D%/packages/patches/clang-17.0-libc-search-path.patch	\
  %D%/packages/patches/clang-17.0-link-dsymutil-latomic.patch	\
+  %D%/packages/patches/clang-17.0-fix-build-with-gcc-14-on-arm.patch    \
  %D%/packages/patches/clang-18.0-libc-search-path.patch	\
  %D%/packages/patches/clang-runtime-esan-build-fixes.patch	\
  %D%/packages/patches/clang-runtime-12-remove-crypt-interceptors.patch \
@@ -1161,7 +1164,6 @@ dist_patch_DATA =						\
  %D%/packages/patches/dbus-helper-search-path.patch		\
  %D%/packages/patches/dbus-c++-gcc-compat.patch		\
  %D%/packages/patches/dbus-c++-threading-mutex.patch		\
-  %D%/packages/patches/dbxfs-remove-sentry-sdk.patch		\
  %D%/packages/patches/ddd-build.patch				\
  %D%/packages/patches/debops-setup-py-avoid-git.patch	\
  %D%/packages/patches/dee-vapi.patch			\
@@ -1244,11 +1246,11 @@ dist_patch_DATA =						\
  %D%/packages/patches/esmtp-add-lesmtp.patch		\
  %D%/packages/patches/esound-c99.patch         		\
  %D%/packages/patches/exercism-disable-self-update.patch	\
-  %D%/packages/patches/extempore-unbundle-external-dependencies.patch	\
  %D%/packages/patches/extundelete-e2fsprogs-1.44.patch		\
  %D%/packages/patches/fail2ban-fix-sshd-filter.patch           \
  %D%/packages/patches/fail2ban-paths-guix-conf.patch		\
  %D%/packages/patches/faiss-tests-CMakeLists-find-googletest.patch	\
+  %D%/packages/patches/falcosecurity-libs-bpf-probes-fix.patch  \
  %D%/packages/patches/falcosecurity-libs-shared-build.patch	\
  %D%/packages/patches/farstream-gupnp.patch                         \
  %D%/packages/patches/farstream-make.patch                          \
@@ -1278,6 +1280,7 @@ dist_patch_DATA =						\
  %D%/packages/patches/ffmpeg-jami-remove-mjpeg-log.patch	\
  %D%/packages/patches/ffmpeg-jami-screen-sharing-x11-fix.patch	\
  %D%/packages/patches/ffmpeg-4-binutils-2.41.patch	\
+  %D%/packages/patches/fgallery-also-look-for-7z.patch		\
  %D%/packages/patches/fifengine-boost-compat.patch		\
  %D%/packages/patches/fifengine-python-3.9-compat.patch	\
  %D%/packages/patches/fifengine-swig-compat.patch		\
@@ -1290,6 +1293,7 @@ dist_patch_DATA =						\
  %D%/packages/patches/flatpak-fix-fonts-icons.patch	\
  %D%/packages/patches/flatpak-fix-icon-validation.patch	\
  %D%/packages/patches/flatpak-unset-gdk-pixbuf-for-sandbox.patch	\
+  %D%/packages/patches/flex-fix-make-dependencies.patch         \
  %D%/packages/patches/fluxbox-1.3.7-no-dynamic-cursor.patch	\
  %D%/packages/patches/fluxbox-1.3.7-gcc.patch			\
  %D%/packages/patches/fmt-9-overspecified-tests.patch	\
@@ -1304,6 +1308,8 @@ dist_patch_DATA =						\
  %D%/packages/patches/fp16-system-libraries.patch		\
  %D%/packages/patches/fpc-reproducibility.patch		\
  %D%/packages/patches/fpc-glibc-2.34-compat.patch		\
+  %D%/packages/patches/fritzing-0.9.6-fix-types.patch		\
+  %D%/packages/patches/freedink-engine-fix-const-char.patch	\
  %D%/packages/patches/freedict-tools-fix-determinism.patch	\
  %D%/packages/patches/freedink-engine-fix-sdl-hints.patch	\
  %D%/packages/patches/freeimage-libtiff-compat.patch		\
@@ -1435,51 +1441,45 @@ dist_patch_DATA =						\
  %D%/packages/patches/glib-appinfo-watch.patch			\
  %D%/packages/patches/glib-skip-failing-test.patch		\
  %D%/packages/patches/glibc-2.33-riscv64-miscompilation.patch	\
+  %D%/packages/patches/glibc-2.35-CVE-2023-4911.patch	\
+  %D%/packages/patches/glibc-2.37-hurd-clock_t_centiseconds.patch	\
+  %D%/packages/patches/glibc-2.37-versioned-locpath.patch	\
+  %D%/packages/patches/glibc-2.38-ldd-x86_64.patch		\
  %D%/packages/patches/glibc-2.39-git-updates.patch	\
  %D%/packages/patches/glibc-2.40-dl-cache.patch		\
-  %D%/packages/patches/glibc-CVE-2019-7309.patch		\
-  %D%/packages/patches/glibc-CVE-2019-9169.patch		\
-  %D%/packages/patches/glibc-CVE-2019-19126.patch		\
-  %D%/packages/patches/glibc-2.35-CVE-2023-4911.patch	\
+  %D%/packages/patches/glibc-2.41-bootstrap-system.patch	\
+  %D%/packages/patches/glibc-2.41-hurd-local-clock_gettime_MONOTONIC.patch	\
+  %D%/packages/patches/glibc-2.41-ldd-x86_64.patch		\
  %D%/packages/patches/glibc-allow-kernel-2.6.32.patch		\
-  %D%/packages/patches/glibc-boot-2.16.0.patch			\
  %D%/packages/patches/glibc-boot-2.2.5.patch			\
+  %D%/packages/patches/glibc-boot-2.16.0.patch			\
  %D%/packages/patches/glibc-bootstrap-system-2.2.5.patch 	\
  %D%/packages/patches/glibc-bootstrap-system-2.16.0.patch 	\
  %D%/packages/patches/glibc-bootstrap-system.patch		\
-  %D%/packages/patches/glibc-2.41-bootstrap-system.patch	\
  %D%/packages/patches/glibc-cross-objcopy.patch		\
  %D%/packages/patches/glibc-cross-objdump.patch		\
  %D%/packages/patches/glibc-dl-cache.patch			\
  %D%/packages/patches/glibc-hidden-visibility-ldconfig.patch	\
  %D%/packages/patches/glibc-hurd-clock_gettime_monotonic.patch	\
-  %D%/packages/patches/glibc-2.31-hurd-clock_gettime_monotonic.patch	\
-  %D%/packages/patches/glibc-2.37-hurd-clock_t_centiseconds.patch	\
-  %D%/packages/patches/glibc-2.41-hurd-local-clock_gettime_MONOTONIC.patch	\
-  %D%/packages/patches/glibc-2.37-versioned-locpath.patch	\
-  %D%/packages/patches/glibc-2.38-ldd-x86_64.patch		\
-  %D%/packages/patches/glibc-2.41-ldd-x86_64.patch		\
  %D%/packages/patches/glibc-hurd-clock_t_centiseconds.patch	\
  %D%/packages/patches/glibc-hurd-getauxval.patch		\
  %D%/packages/patches/glibc-hurd-gettyent.patch		\
  %D%/packages/patches/glibc-hurd-mach-print.patch		\
  %D%/packages/patches/glibc-hurd-pthread_setcancelstate.patch	\
+  %D%/packages/patches/glibc-hurd-signal-fpe-exception.patch 	\
  %D%/packages/patches/glibc-hurd-signal-sa-siginfo.patch	\
  %D%/packages/patches/glibc-hurd-2.41-pthread-once.patch	\
  %D%/packages/patches/glibc-hurd-2.41-pthread-sigmask.patch	\
  %D%/packages/patches/glibc-hurd-2.41-symlink.patch		\
+  %D%/packages/patches/glibc-hurd-xstate.patch  		\
  %D%/packages/patches/glibc-hurd64-gcc-14.2-tls-bug.patch	\
  %D%/packages/patches/glibc-hurd64-intr-msg-clobber.patch	\
  %D%/packages/patches/glibc-ldd-powerpc.patch			\
  %D%/packages/patches/glibc-ldd-x86_64.patch			\
  %D%/packages/patches/glibc-locales.patch			\
-  %D%/packages/patches/glibc-locales-2.28.patch			\
  %D%/packages/patches/glibc-reinstate-prlimit64-fallback.patch	\
-  %D%/packages/patches/glibc-skip-c++.patch			\
-  %D%/packages/patches/glibc-versioned-locpath.patch		\
-  %D%/packages/patches/glibc-2.29-git-updates.patch     	\
-  %D%/packages/patches/glibc-2.29-supported-locales.patch     	\
  %D%/packages/patches/glibc-supported-locales.patch     	\
+  %D%/packages/patches/glibc-versioned-locpath.patch		\
  %D%/packages/patches/gmime-disable-tests.patch		\
  %D%/packages/patches/gmp-arm-asm-nothumb.patch		\
  %D%/packages/patches/gmp-faulty-test.patch			\
@@ -1493,6 +1493,7 @@ dist_patch_DATA =						\
  %D%/packages/patches/gnome-session-support-elogind.patch	\
  %D%/packages/patches/gnome-tweaks-search-paths.patch		\
  %D%/packages/patches/gnulib-bootstrap.patch			\
+  %D%/packages/patches/gnumach-div0.patch			\
  %D%/packages/patches/gnumach-version.patch			\
  %D%/packages/patches/gnupg-default-pinentry.patch		\
  %D%/packages/patches/gnupg-1-build-with-gcc10.patch		\
@@ -1519,7 +1520,6 @@ dist_patch_DATA =						\
  %D%/packages/patches/grantlee-register-metaenumvariable.patch	\
  %D%/packages/patches/grep-timing-sensitive-test.patch		\
  %D%/packages/patches/grfcodec-gcc-compat.patch		\
-  %D%/packages/patches/gromacs-tinyxml2.patch			\
  %D%/packages/patches/groovy-add-exceptionutilsgenerator.patch	\
  %D%/packages/patches/grub-efi-fat-serial-number.patch		\
  %D%/packages/patches/grub-hurd64.patch			\
@@ -1582,16 +1582,15 @@ dist_patch_DATA =						\
  %D%/packages/patches/highlight-gui-data-dir.patch		\
  %D%/packages/patches/hplip-usb-timeout.patch			\
  %D%/packages/patches/http-parser-CVE-2020-8287.patch		\
-  %D%/packages/patches/htslib-for-stringtie.patch		\
  %D%/packages/patches/hubbub-sort-entities.patch		\
  %D%/packages/patches/hueplusplus-mbedtls.patch		\
  %D%/packages/patches/hugs-fix-build.patch			\
  %D%/packages/patches/hurd-refcounts-assert.patch		\
  %D%/packages/patches/hurd-rumpdisk-no-hd.patch		\
-  %D%/packages/patches/hurd-socket-activation.patch		\
  %D%/packages/patches/hurd-startup.patch			\
  %D%/packages/patches/hwloc-1-test-btrfs.patch			\
  %D%/packages/patches/i7z-gcc-10.patch				\
+  %D%/packages/patches/icecat-adjust-mozilla-desktop.patch      \
  %D%/packages/patches/icecat-makeicecat.patch			\
  %D%/packages/patches/icecat-avoid-bundled-libraries.patch	\
  %D%/packages/patches/icecat-compare-paths.patch		\
@@ -1618,7 +1617,6 @@ dist_patch_DATA =						\
  %D%/packages/patches/irrlicht-link-against-needed-libs.patch	\
  %D%/packages/patches/isl-0.11.1-aarch64-support.patch		\
  %D%/packages/patches/ispell-for-linphone-cmake.patch		\
-  %D%/packages/patches/jamesdsp-fix-bulid-on-pipewire-1.4.0.patch\
  %D%/packages/patches/jami-find-package-avutil.patch		\
  %D%/packages/patches/jami-libjami-headers-search.patch	\
  %D%/packages/patches/jami-qwindowkit.patch			\
@@ -1763,6 +1761,13 @@ dist_patch_DATA =						\
  %D%/packages/patches/libmpeg2-global-symbol-test.patch	\
  %D%/packages/patches/liblinphone-jsoncpp.patch		\
  %D%/packages/patches/libphonenumber-reproducible-build.patch	\
+  %D%/packages/patches/plotutils-c23.patch                      \
+  %D%/packages/patches/plotutils-configure-c99.patch            \
+  %D%/packages/patches/plotutils-cxx17-fix.patch                \
+  %D%/packages/patches/plotutils-format-security.patch          \
+  %D%/packages/patches/plotutils-libxmi.patch                   \
+  %D%/packages/patches/plotutils-makefile.patch                 \
+  %D%/packages/patches/plotutils-rangecheck.patch               \
  %D%/packages/patches/libqalculate-3.8.0-libcurl-ssl-fix.patch	\
  %D%/packages/patches/libquicktime-ffmpeg.patch 		\
  %D%/packages/patches/libsecret-fix-test-paths.patch		\
@@ -1778,8 +1783,6 @@ dist_patch_DATA =						\
  %D%/packages/patches/libtiff-CVE-2022-34526.patch		\
  %D%/packages/patches/libtirpc-CVE-2021-46828.patch		\
  %D%/packages/patches/libtirpc-hurd.patch			\
-  %D%/packages/patches/libtool-grep-compat.patch		\
-  %D%/packages/patches/libtool-skip-tests2.patch		\
  %D%/packages/patches/libtree-fix-check-non-x86.patch		\
  %D%/packages/patches/libusb-0.1-disable-tests.patch		\
  %D%/packages/patches/libusb-for-axoloti.patch			\
@@ -1788,6 +1791,8 @@ dist_patch_DATA =						\
  %D%/packages/patches/libvdpau-va-gl-unbundle.patch		\
  %D%/packages/patches/libvpx-CVE-2016-2818.patch		\
  %D%/packages/patches/libxcb-path-max.patch			\
+  %D%/packages/patches/libxmi-gcc15.patch 			\
+  %D%/packages/patches/libxmi-implicit.patch			\
  %D%/packages/patches/libxml2-xpath0-Add-option-xpath0.patch	\
  %D%/packages/patches/libwpd-gcc-compat.patch			\
  %D%/packages/patches/libxt-guix-search-paths.patch		\
@@ -1839,6 +1844,7 @@ dist_patch_DATA =						\
  %D%/packages/patches/maxima-defsystem-mkdir.patch		\
  %D%/packages/patches/maven-generate-component-xml.patch		\
  %D%/packages/patches/maven-generate-javax-inject-named.patch		\
+  %D%/packages/patches/mc2mt-add-packaging-support.patch	\
  %D%/packages/patches/mcrypt-CVE-2012-4409.patch			\
  %D%/packages/patches/mcrypt-CVE-2012-4426.patch			\
  %D%/packages/patches/mcrypt-CVE-2012-4527.patch			\
@@ -1948,6 +1954,7 @@ dist_patch_DATA =						\
  %D%/packages/patches/ocaml-4.09-multiple-definitions.patch	\
  %D%/packages/patches/omake-fix-non-determinism.patch	\
  %D%/packages/patches/oneko-remove-nonfree-characters.patch	\
+  %D%/packages/patches/onetbb-other-arches.patch	\
  %D%/packages/patches/online-judge-tools.patch		\
  %D%/packages/patches/onnx-optimizer-system-library.patch	\
  %D%/packages/patches/onnx-1.13.1-use-system-googletest.patch	\
@@ -2004,14 +2011,10 @@ dist_patch_DATA =						\
  %D%/packages/patches/orpheus-cast-errors-and-includes.patch	\
  %D%/packages/patches/ots-no-include-missing-file.patch	\
  %D%/packages/patches/owncloud-disable-updatecheck.patch	\
-  %D%/packages/patches/p7zip-CVE-2016-9296.patch		\
-  %D%/packages/patches/p7zip-CVE-2017-17969.patch		\
  %D%/packages/patches/pnet-fix-line-number-info.patch		\
  %D%/packages/patches/pnet-fix-off-by-one.patch		\
  %D%/packages/patches/pnet-newer-libgc-fix.patch		\
  %D%/packages/patches/pnet-newer-texinfo-fix.patch		\
-  %D%/packages/patches/p7zip-fix-build-with-gcc-11.patch	\
-  %D%/packages/patches/p7zip-remove-unused-code.patch		\
  %D%/packages/patches/pam-krb5-CVE-2020-10595.patch		\
  %D%/packages/patches/pango-skip-libthai-test.patch		\
  %D%/packages/patches/password-store-tree-compat.patch		\
@@ -2052,6 +2055,7 @@ dist_patch_DATA =						\
  %D%/packages/patches/python-random2-getrandbits-test.patch		\
  %D%/packages/patches/python-pillow-use-zlib-1.3.patch	\
  %D%/packages/patches/python-pydocstyle-add-support-for-pep701.patch	\
+  %D%/packages/patches/python-pypytools-python-3-fixes.patch	\
  %D%/packages/patches/python-pyreadstat-link-libiconv.patch	\
  %D%/packages/patches/python-sip-include-dirs.patch	\
  %D%/packages/patches/python-scikit-build-setuptools-compat.patch	\
@@ -2079,6 +2083,7 @@ dist_patch_DATA =						\
  %D%/packages/patches/smalltalk-multiplication-overflow.patch	\
  %D%/packages/patches/soci-mysql-ddl-types.patch		\
  %D%/packages/patches/sqlite-hurd.patch			\
+  %D%/packages/patches/squeak-vm-gcc-14-fix.patch		\
  %D%/packages/patches/stepmania-ffmpeg-compat.patch			\
  %D%/packages/patches/stk-5.0.1-fix-typo.patch			\
  %D%/packages/patches/strace-readlink-tests.patch		\
@@ -2090,6 +2095,7 @@ dist_patch_DATA =						\
  %D%/packages/patches/perl-5.14-no-sys-dirs.patch		\
  %D%/packages/patches/perl-autosplit-default-time.patch	\
  %D%/packages/patches/perl-class-methodmaker-reproducible.patch \
+  %D%/packages/patches/perl-crypt-des-implicit-func-decl.patch	\
  %D%/packages/patches/perl-image-exiftool-CVE-2021-22204.patch	\
  %D%/packages/patches/perl-net-amazon-s3-moose-warning.patch	\
  %D%/packages/patches/perl-net-dns-resolver-programmable-fix.patch	\
@@ -2134,7 +2140,6 @@ dist_patch_DATA =						\
  %D%/packages/patches/psm-ldflags.patch			\
  %D%/packages/patches/psm-repro.patch				\
  %D%/packages/patches/pstoedit-fix-gcc12.patch			\
-  %D%/packages/patches/pstoedit-fix-plainC.patch		\
  %D%/packages/patches/pstoedit-pkglibdir.patch			\
  %D%/packages/patches/pulseaudio-fix-mult-test.patch		\
  %D%/packages/patches/pulseaudio-longer-test-timeout.patch	\
@@ -2159,7 +2164,6 @@ dist_patch_DATA =						\
  %D%/packages/patches/python-3-reproducible-build.patch	\
  %D%/packages/patches/python-cross-compile.patch		\
  %D%/packages/patches/python-colour-remove-d2to1.patch		\
-  %D%/packages/patches/python-configobj-setuptools.patch	\
  %D%/packages/patches/python-debugpy-unbundle-pydevd.patch	\
  %D%/packages/patches/python-docopt-pytest6-compat.patch	\
  %D%/packages/patches/python-fixtures-remove-monkeypatch-test.patch	\
@@ -2179,6 +2183,7 @@ dist_patch_DATA =						\
  %D%/packages/patches/python-pytorch-fix-codegen.patch		\
  %D%/packages/patches/python-pytorch-for-r-torch-fix-codegen.patch \
  %D%/packages/patches/python-pytorch-for-r-torch-system-libraries.patch \
+  %D%/packages/patches/python-pytorch-for-r-torch-without-kineto.patch \
  %D%/packages/patches/python-pytorch-runpath.patch		\
  %D%/packages/patches/python-pytorch-system-libraries.patch	\
  %D%/packages/patches/python-pytorch-without-kineto.patch	\
@@ -2246,6 +2251,7 @@ dist_patch_DATA =						\
  %D%/packages/patches/rocm-opencl-runtime-4.3-noclinfo.patch 	\
  %D%/packages/patches/rottlog-direntry.patch 			\
  %D%/packages/patches/ruby-actionpack-remove-browser-tests.patch	\
+  %D%/packages/patches/ruby-activesupport-fix-deprecation-warning.patch	\
  %D%/packages/patches/ruby-asciidoctor-pdf-support-prawn-svg-0_36.patch	\
  %D%/packages/patches/ruby-chunky-png-ruby-3-2-support.patch	\
  %D%/packages/patches/ruby-hiredis-use-system-hiredis.patch	\
@@ -2295,6 +2301,7 @@ dist_patch_DATA =						\
  %D%/packages/patches/seq24-rename-mutex.patch			\
  %D%/packages/patches/libsequoia-fix-ffi-Makefile.patch	\
  %D%/packages/patches/libsequoia-remove-store.patch		\
+  %D%/packages/patches/shaderc-for-pcsx2-changes.patch		\
  %D%/packages/patches/shakespeare-spl-fix-grammar.patch		\
  %D%/packages/patches/shared-mime-info-xdgmime-path.patch	\
  %D%/packages/patches/sharutils-CVE-2018-1000097.patch		\
@@ -2324,6 +2331,13 @@ dist_patch_DATA =						\
  %D%/packages/patches/superlu-dist-awpm-grid.patch		\
  %D%/packages/patches/superlu-dist-scotchmetis.patch		\
  %D%/packages/patches/supertux-unbundle-squirrel.patch		\
+  %D%/packages/patches/swift-5.7.3-sdk-path.patch			\
+  %D%/packages/patches/swift-5.7.3-sourcekit-rpath.patch		\
+  %D%/packages/patches/swift-6.2-cplus-include-path.patch		\
+  %D%/packages/patches/swift-6.2-exclude-scan-test.patch		\
+  %D%/packages/patches/swift-corelibs-libdispatch-5.6.3-lock-cpp.patch	\
+  %D%/packages/patches/swift-corelibs-libdispatch-5.7.3-modulemap.patch	\
+  %D%/packages/patches/swift-llvm-5.7.3-linux.patch	\
  %D%/packages/patches/swig-support-gcc-12.patch		\
  %D%/packages/patches/swish-e-search.patch			\
  %D%/packages/patches/swish-e-format-security.patch		\
@@ -2352,6 +2366,7 @@ dist_patch_DATA =						\
  %D%/packages/patches/texi2html-document-encoding.patch	\
  %D%/packages/patches/texi2html-i18n.patch			\
  %D%/packages/patches/texmacs-wayland-hidpi.patch	\
+  %D%/packages/patches/texlive-bin-luaoutputdir-test.patch      \
  %D%/packages/patches/thefuck-test-environ.patch		\
  %D%/packages/patches/thefuck-remove-broken-tests.patch	\
  %D%/packages/patches/tidy-CVE-2015-5522+5523.patch		\
@@ -2471,11 +2486,14 @@ dist_patch_DATA =						\
  %D%/packages/patches/xfce4-settings-defaults.patch		\
  %D%/packages/patches/xgboost-use-system-dmlc-core.patch	\
  %D%/packages/patches/xiphos-glib.patch                        \
+  %D%/packages/patches/xlispstat-fix-compilation-with-modern-gcc.patch \
  %D%/packages/patches/xmonad-dynamic-linking.patch		\
  %D%/packages/patches/xplanet-1.3.1-cxx11-eof.patch		\
  %D%/packages/patches/xplanet-1.3.1-libdisplay_DisplayOutput.cpp.patch	\
  %D%/packages/patches/xplanet-1.3.1-libimage_gif.c.patch	\
  %D%/packages/patches/xplanet-1.3.1-xpUtil-Add2017LeapSecond.cpp.patch	\
+  %D%/packages/patches/xpra-5.0-install_libs.patch              \
+  %D%/packages/patches/xpra-5.0-systemd-run.patch              \
  %D%/packages/patches/xpra-6.0-systemd-run.patch		\
  %D%/packages/patches/xpra-6.1-install_libs.patch		\
  %D%/packages/patches/xterm-370-explicit-xcursor.patch		\
@@ -77,36 +77,43 @@
    (build-system glib-or-gtk-build-system)
    (outputs '("out" "bin"))
    (arguments
-     `(#:tests? #f                      ; Tests require drivers
-       #:configure-flags
-       (list "CFLAGS=-g -O2 -Wno-error=incompatible-pointer-types"
-             "--disable-static"
-             "--enable-fake")
-       #:phases
-       (modify-phases %standard-phases
-         ,@(if (this-package-native-input "config")
-               `((add-after 'unpack 'update-config-scripts
-                   (lambda* (#:key native-inputs inputs #:allow-other-keys)
-                     (for-each
-                       (lambda (dir)
-                         (for-each (lambda (file)
-                                     (install-file
-                                       (search-input-file
-                                         (or native-inputs inputs)
-                                         (string-append "/bin/" file)) dir))
-                                   '("config.guess" "config.sub")))
-                       '("." "libltdl")))))
-               '()))))
+     (list
+      #:tests? #f                       ; Tests require drivers
+      #:configure-flags
+      #~(list "CFLAGS=-g -O2 -Wno-error=incompatible-pointer-types"
+              "--disable-static"
+              "--enable-fake")
+      #:phases
+      #~(modify-phases %standard-phases
+          #$@(if (this-package-native-input "config")
+                 #~((add-after 'unpack 'update-config-scripts
+                      (lambda* (#:key native-inputs inputs #:allow-other-keys)
+                        (for-each
+                         (lambda (dir)
+                           (for-each
+                            (lambda (file)
+                              (install-file
+                               (search-input-file
+                                (or native-inputs inputs)
+                                (string-append "/bin/" file)) dir))
+                            (list "config.guess" "config.sub")))
+                         (list "." "libltdl")))))
+                 (list)))))
    (native-inputs
     (append
-       (if (or (target-aarch64?)
-               (target-ppc64le?)
-               (target-riscv64?))
-           (list config)
-           '())
-       (list latex2html pkg-config python-wrapper swig)))
+      (if (or (target-aarch64?)
+              (target-ppc64le?)
+              (target-riscv64?))
+          (list config)
+          (list))
+      (list latex2html
+            pkg-config
+            python-wrapper
+            swig)))
    (inputs
-     (list glib gtk+-2 libusb-compat))
+     (list glib
+           gtk+-2
+           libusb-compat))
    (synopsis "Portable Braille Library")
    (description "Libbraille is a library to easily access Braille displays and
 terminals.")
@@ -40,7 +40,7 @@
 (define-public acl
  (package
    (name "acl")
-    (version "2.3.1")
+    (version "2.3.2")
    (source
     (origin
      (method url-fetch)
@@ -48,7 +48,7 @@
                          version ".tar.gz"))
      (sha256
       (base32
-        "1bqi7hj0xkpivwg7lx5cv3yvs9ks1i6azvpgbvfpzcq1i736233n"))))
+        "0z1gi82zc2xcbchfagd7apn2s7camaagj8y6hmysl1wpcanxnasz"))))
    (build-system gnu-build-system)
    (arguments
     `(#:modules ((ice-9 ftw)
@@ -583,14 +583,14 @@ interface and is based on GNU Guile.")
 (define-public shepherd-1.0
  (package
    (inherit shepherd-0.10)
-    (version "1.0.7")
+    (version "1.0.8")
    (source (origin
              (method url-fetch)
              (uri (string-append "mirror://gnu/shepherd/shepherd-"
                                  version ".tar.gz"))
              (sha256
               (base32
-                "15vmfbnah4p978zs4j95fl7m3sy98z1brgyz2m8s30zfh5srnnij"))))
+                "1xbzf7vmanb36hfb0kc9a240x7xnkynsfs6hcz2kj0xzf19h1srv"))))
    (arguments
     (substitute-keyword-arguments (package-arguments shepherd-0.10)
       ((#:configure-flags flags #~'())
@@ -603,10 +603,19 @@ interface and is based on GNU Guile.")
                               "/bin/zstd")))))
    (native-inputs
     (modify-inputs (package-native-inputs shepherd-0.10)
-       (replace "guile-fibers" guile-fibers))) ;use latest guile-fibers available
+       (replace "guile-fibers"
+         ;; Work around <https://codeberg.org/guile/fibers/issues/89>.
+         ;; This affects any system without a functional real-time
+         ;; clock (RTC), but in practice these are typically
+         ;; single-board computers.
+         (if (or (target-arm?)
+                 (target-riscv64?))
+             guile-fibers-1.1
+             guile-fibers)))) ;use latest guile-fibers available
    (inputs
     (modify-inputs (package-inputs shepherd-0.10)
-       (replace "guile-fibers" guile-fibers) ;use latest guile-fibers available
+       (replace "guile-fibers"
+                (this-package-native-input "guile-fibers"))
       (append gzip zstd)))))

 (define-public shepherd shepherd-0.10)
@@ -2709,7 +2718,7 @@ command.")
      #:tests? #f ; no tests
      ;; Make sure the (rarely updated) package 'imagemagick/stable'
      ;; does not end up in the closure.
-      #:disallowed-references (list imagemagick/stable)
+      #:disallowed-references (list (this-package-native-input "imagemagick"))
      #:modules '((guix build qt-build-system)
                  ((guix build gnu-build-system) #:prefix gnu:)
                  (guix build utils))
@@ -3775,14 +3784,14 @@ rules is done with the @code{auditctl} utility.")
 (define-public nmap
  (package
    (name "nmap")
-    (version "7.97")
+    (version "7.98")
    (source (origin
              (method url-fetch)
              (uri (string-append "https://nmap.org/dist/nmap-" version
                                  ".tar.bz2"))
              (sha256
               (base32
-                "1h252sz1cqr0r440s7pxn9wwn1jffbrdvacnvmbw4w664mwz565g"))
+                "1rlpv238ixcj62d740w8xghcfmkvmg9453kh46gmr7mfx89p716f"))
              (modules '((guix build utils)))
              (snippet
               '(begin
@@ -4659,7 +4668,7 @@ information tool.")
 (define-public fastfetch-minimal
  (package
    (name "fastfetch-minimal")
-    (version "2.53.0")
+    (version "2.55.0")
    (source
     (origin
       (method git-fetch)
@@ -4668,7 +4677,7 @@ information tool.")
             (commit version)))
       (file-name (git-file-name name version))
       (sha256
-        (base32 "0w260lscjy3rqahhr2637hb3fqsklv2qx59f2v66wy99nnmqvbha"))
+        (base32 "1vqw0r0h8clb302bzbmfxpkz54kx6sd661nm50vvhijham8x7mlb"))
       (modules '((guix build utils)))
       (snippet '(begin
                   (delete-file-recursively "src/3rdparty")))))
@@ -5143,7 +5152,7 @@ cache of unix and unix-like systems.")
 (define-public solaar
  (package
    (name "solaar")
-    (version "1.1.14")
+    (version "1.1.16")
    (source
     (origin
       (method git-fetch)
@@ -5152,7 +5161,7 @@ cache of unix and unix-like systems.")
             (commit version)))
       (file-name (git-file-name name version))
       (sha256
-        (base32 "000700waw4z6ab40naycapjgqz8yvz9ny1px94ni4pwf8f3kh0vh"))))
+        (base32 "1q05pcrl1pr6ls92m5k690qrwqb4nz1lganxvbj9b40w3c6nh5iy"))))
    (build-system pyproject-build-system)
    (native-inputs
     (list python-pytest
@@ -5389,7 +5398,7 @@ elogind's uaccess feature.")
 (define-public jc
  (package
    (name "jc")
-    (version "1.25.5")
+    (version "1.25.6")
    (source
     (origin
       ;; The PyPI tarball lacks the test suite.
@@ -5399,7 +5408,7 @@ elogind's uaccess feature.")
             (commit (string-append "v" version))))
       (file-name (git-file-name name version))
       (sha256
-        (base32 "16agzk47f1g72gni3lazqlcv7fs0nb2dwbagv6kxjbk36pm3mzmn"))))
+        (base32 "0bpna1hfwigv9r3i1xafl96jlj4335hrjq5rkrgh2nzc57453bly"))))
    (build-system pyproject-build-system)
    (arguments
     (list #:phases
@@ -5569,14 +5578,14 @@ Netgear devices.")
 (define-public atop
  (package
    (name "atop")
-    (version "2.12.0")
+    (version "2.12.1")
    (source (origin
              (method url-fetch)
              (uri (string-append "https://www.atoptool.nl/download/atop-"
                                  version ".tar.gz"))
              (sha256
               (base32
-                "11ih6kan3j9kg83pjhy9yffgpr638b0mfg1fq90yzrhl1k4yq28d"))))
+                "1xhjpmaans63g0y4z9gzff09fxxf9sgmj64ycc2r9y7sbmyfdnsg"))))
    (build-system gnu-build-system)
    (arguments
     (list
@@ -14,6 +14,7 @@
 ;;; Copyright © 2020 Vincent Legoll <vincent.legoll@gmail.com>
 ;;; Copyright © 2020, 2021, 2023, 2024, 2025 Vinicius Monego <monego@posteo.net>
 ;;; Copyright © 2021 Lars-Dominik Braun <ldb@leibniz-psychology.org>
+;;; Copyright © 2022 宋文武 <iyzsong@envs.net>
 ;;; Copyright © 2022 Maxim Cournoyer <maxim@guixotic.coop>
 ;;; Copyright © 2023 Mehmet Tekman <mtekman89@gmail.com>
 ;;; Copyright © 2025 Sharlatan Hellseher <sharlatanus@gmail.com>
@@ -45,6 +46,7 @@
  #:use-module (gnu packages boost)
  #:use-module (gnu packages build-tools)
  #:use-module (gnu packages check)
+  #:use-module (gnu packages cmake)
  #:use-module (gnu packages compression)
  #:use-module (gnu packages cpp)
  #:use-module (gnu packages curl)
@@ -237,7 +239,7 @@ the real span of the lattice.")
    (inputs
     (list fplll gmp mpfr pari-gp))
    (propagated-inputs
-     (list python-cysignals python-cython-3 python-flake8 python-numpy))
+     (list python-cysignals python-cython python-flake8 python-numpy))
    (home-page "https://github.com/fplll/fpylll")
    (synopsis "Python interface for fplll")
    (description "fpylll is a Python wrapper for fplll.")
@@ -550,7 +552,7 @@ fast arithmetic.")
    (native-inputs
     (list meson-python
           pkg-config
-           python-cython-3
+           python-cython
           python-pytest))
    (inputs
     (list gmp
@@ -1053,6 +1055,34 @@ Optional thin wrappers allow usage of the library from other languages.")
    (license (list license:expat        ;SymEngine
                   license:bsd-3))))    ;3rd party code

+(define-public python-symengine
+  (package
+    (name "python-symengine")
+    (version "0.14.1")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (pypi-uri "symengine" version))
+       (sha256
+        (base32 "1w7hwavbxgikljy9m3p89k3x2zdhv81h9bh330aw4wb3qm74p7jf"))))
+    (build-system pyproject-build-system)
+    (arguments
+     (list
+      #:test-flags #~(list "--pyargs" "symengine")))
+    (native-inputs
+     (list cmake-minimal
+           python-cython
+           python-pytest
+           python-setuptools))
+    (inputs
+     (list symengine))
+    (home-page "https://github.com/symengine/symengine.py")
+    (synopsis "Python library providing wrappers to SymEngine")
+    (description
+     "This library provides a Python wrapper to SymEngine, a fast C++ symbolic
+manipulation library.")
+    (license license:expat)))
+
 (define-public ginac
  (package
    (name "ginac")
@@ -53,7 +53,9 @@
  #:use-module (gnu packages gcc)
  #:use-module (gnu packages gnupg)
  #:use-module (gnu packages golang-xyz)
+  #:use-module (gnu packages graphviz)
  #:use-module (gnu packages image)
+  #:use-module (gnu packages iso-codes)
  #:use-module (gnu packages java)
  #:use-module (gnu packages linux)
  #:use-module (gnu packages pcre)
@@ -1115,36 +1117,30 @@ safest way, on a file image.")
 (define-public python-androguard
  (package
    (name "python-androguard")
-    (version "3.2.1")
+    (version "3.3.5")    ;TODO: It was released in 2019, there is a fresh version
    (source
-      (origin
-        ;; The pypi release doesn't have the tests, but the tests use
-        ;; packaged binaries, so we skip them.
-        (method url-fetch)
-        (uri (pypi-uri "androguard" version))
-        (sha256
-         (base32
-          "0ndsw00pkyda4i2s3wi5ap8gbk6a9d23xhhxpdbk02padv8sxkfv"))))
-    (build-system python-build-system)
+     (origin
+       (method url-fetch)
+       (uri (pypi-uri "androguard" version))
+       (sha256
+        (base32 "18nd08rbvc4d1p9r70qp76rcbldvpv89prsi15alrmxdlnimqrgh"))))
+    (build-system pyproject-build-system)
+    ;; XXX: The pypi release doesn't have the tests, but the tests use
+    ;; packaged binaries, so we skip them.
    (arguments
-     '(#:phases
-       (modify-phases %standard-phases
-         (replace 'check
-           ;; Adapted from .travis.yml
-           (lambda _
-             (invoke "nosetests" "--with-coverage" "--with-timer"
-                     "--timer-top-n" "50"))))))
+     (list #:tests? #f))
    (native-inputs
-     (list python-codecov python-coverage python-mock python-nose
-           python-nose-timer))
+     (list python-setuptools))
    (propagated-inputs
     (list python-asn1crypto
+           python-click
           python-colorama
           python-future
           python-ipython
           python-lxml
           python-matplotlib
           python-networkx
+           python-pydot
           python-pygments
           python-pyperclip))
    (home-page "https://github.com/androguard/androguard")
@@ -1196,49 +1192,49 @@ for communicating with Xiaomi smart appliances over miIO and MIoT protocols.")
 (define-public fdroidserver
  (package
    (name "fdroidserver")
-    (version "1.1.9")
+    (version "2.4.2")
    (source
     (origin
       (method url-fetch)
       (uri (pypi-uri "fdroidserver" version))
       (sha256
        (base32
-         "0m07f791z45w7r2dzx4yb6s54b3c3wykm3w9hn25p2jcyax082a2"))))
-    (build-system python-build-system)
+         "06xybginrwi5c7bw000wz5s5hzi0aqrxskzwh8qc6wv463w2djax"))))
+    (build-system pyproject-build-system)
    (arguments
-     `(#:phases
-       (modify-phases %standard-phases
-         (add-after 'unpack 'fix-versioning
-           (lambda _
-             (substitute* "setup.py"
-               (("0.2.1") ,(package-version python-pyasn1-modules))
-               ;; The dependency on docker has been removed upstream by
-               ;; a fairly large patch:
-               ;; https://gitlab.com/fdroid/fdroidserver/-/commit/89614851250c79a05db84070feca6dea033af334
-               ;; that is not in a release yet. It appears we can compile with
-               ;; a newer version.
-               (("docker-py >= 1.9, < 2.0") "docker >= 1.9"))
-             #t)))))
+     (list
+      #:tests? #f                       ;requires Android SDK
+      #:phases
+      #~(modify-phases %standard-phases
+          (add-before 'check 'set-env
+            (lambda _
+              (setenv "HOME" "/tmp"))))))
    (propagated-inputs
     (list python-androguard
           python-apache-libcloud
+           python-argcomplete
+           python-asn1crypto
           python-clint
           python-defusedxml
           python-docker
           python-gitpython
           python-mwclient
+           python-oscrypto
           python-paramiko
           python-pillow
+           python-platformdirs
+           python-puremagic
           python-pyasn1
           python-pyasn1-modules
           python-pyyaml
           python-qrcode
-           python-ruamel.yaml
           python-requests
-           python-vagrant))
+           python-ruamel.yaml-0.16
+           python-vagrant
+           python-yamllint
+           sdkmanager))
    (native-inputs
-     (list python-babel python-bcrypt python-docker-pycreds python-pynacl
-           python-websocket-client))
+     (list python-babel python-setuptools))
    (home-page "https://f-droid.org")
    (synopsis "F-Droid server tools")
    (description
@@ -40,13 +40,15 @@
       (origin
         (method git-fetch)
         (uri (git-reference
-               (url "https://github.com/AppImage/type2-runtime")
-               (commit commit)))
+                (url "https://github.com/AppImage/type2-runtime")
+                (commit commit)))
         (file-name (git-file-name name version))
         (sha256
          (base32 "0954crhlbapxis96g1s0vfpf78ybr64zvjalak387ksxj560g44x"))))
+      (build-system gnu-build-system)
      (arguments
       (list
+        #:tests? #f                     ; No tests
        #:make-flags
        #~(list "-Csrc/runtime" "runtime-fuse3"
                (string-append "CC=" #$(cc-for-target))
@@ -60,34 +62,33 @@
        `((guix build gnu-build-system)
          (guix build utils)
          (ice-9 binary-ports))
-        #:phases #~(modify-phases %standard-phases
-                     (delete 'configure)
-                     (delete 'check)    ; No tests.
-                     (replace 'install
-                       (lambda _
-                         (install-file "src/runtime/runtime-fuse3"
-                                       (string-append #$output "/bin"))))
-                     ;; Must be after all elf reliant phases.  Used to identify the
-                     ;; executable as an AppImage as per the specification.
-                     (add-after 'make-dynamic-linker-cache 'set-magic-bytes
-                       (lambda _
-                         (let ((port (open (string-append #$output
-                                            "/bin/runtime-fuse3")
-                                           (logior O_WRONLY))))
-                           (seek port 8 SEEK_SET)
-                           (put-bytevector port #vu8(#x41 #x49 #x02))
-                           (close-port port)))))
-        #:disallowed-references (list squashfuse-for-appimage
-                                      fuse-for-appimage
-                                      (gexp-input zstd "static")
-                                      (gexp-input zlib "static"))))
+        #:phases
+        #~(modify-phases %standard-phases
+            (delete 'configure)
+            (replace 'install
+              (lambda _
+                (install-file "src/runtime/runtime-fuse3"
+                              (string-append #$output "/bin"))))
+            ;; Must be after all elf reliant phases.  Used to identify the
+            ;; executable as an AppImage as per the specification.
+            (add-after 'make-dynamic-linker-cache 'set-magic-bytes
+              (lambda _
+                (let ((port (open (string-append #$output
+                                                 "/bin/runtime-fuse3")
+                                  (logior O_WRONLY))))
+                  (seek port 8 SEEK_SET)
+                  (put-bytevector port #vu8(#x41 #x49 #x02))
+                  (close-port port)))))
+        #:disallowed-references
+        (list (this-package-input "squashfuse-for-appimage")
+              (this-package-input "fuse")
+              (gexp-input (this-package-input "zstd") "static")
+              (gexp-input (this-package-input "zlib") "static"))))
      ;; Only needed at build time.
      (inputs (list squashfuse-for-appimage
                    fuse-for-appimage
                    `(,zstd "static")
                    `(,zlib "static")))
-      (build-system gnu-build-system)
-      (home-page "https://github.com/AppImage/type2-runtime")
      (synopsis "Runtime for executing AppImages")
      (description "The runtime is the executable part of every AppImage.  It mounts
 the payload via @acronym{FUSE} and executes the entrypoint, allowing users to run
@@ -96,4 +97,5 @@ ensures that the AppImage can access its bundled libraries and resources seamles
 providing a consistent environment across different Linux distributions.  In the
 absence of @acronym{FUSE}, the AppImage can still be started using the
@option{--appimage-extract-and-run} flag.")
+      (home-page "https://github.com/AppImage/type2-runtime")
      (license license:expat))))
@@ -84,70 +84,69 @@
                   (delete-file-recursively "external/sqlite")))))
    (build-system cmake-build-system)
    (arguments
-     (list #:configure-flags #~'("-DBUILD_PRESET=everything"
-                                 "-DDISTR_TAG='Guix'")
-           #:phases #~(modify-phases %standard-phases
-                        (add-after 'unpack 'patch-paths
-                          (lambda* (#:key outputs #:allow-other-keys)
-                            (substitute* "src/platform/posix/paths.c"
-                              (("/usr/local")
-                               (assoc-ref outputs "out")))))
-                        ;; Normally, it tries to fetch patched openal with git
-                        ;; but copying files manually in the right place seems
-                        ;; to work too.
-                        (add-after 'unpack 'prepare-static-openal
-                          (lambda* (#:key inputs #:allow-other-keys)
-                            (let ((arcan-openal (assoc-ref inputs
-                                                           "arcan-openal")))
-                              (copy-recursively arcan-openal
-                                                "external/git/openal")) #t))
-                        (add-after 'prepare-static-openal 'generate-man
-                          (lambda _
-                            (with-directory-excursion "doc"
-                              (invoke "ruby" "docgen.rb" "mangen")) #t))
-                        (add-before 'configure 'chdir
-                          (lambda _
-                            (chdir "src") #t)))
+     (list
+      #:configure-flags
+      #~'("-DBUILD_PRESET=everything" "-DDISTR_TAG='Guix'")
+      #:phases
+      #~(modify-phases %standard-phases
+          (add-after 'unpack 'patch-paths
+            (lambda _
+              (substitute* "src/platform/posix/paths.c"
+                (("/usr/local") #$output))))
+          ;; Normally, it tries to fetch patched openal with git
+          ;; but copying files manually in the right place seems
+          ;; to work too.
+          (add-after 'unpack 'prepare-static-openal
+            (lambda* (#:key inputs #:allow-other-keys)
+              (copy-recursively #$(this-package-input "arcan-openal-checkout")
+                                "external/git/openal")))
+          (add-after 'prepare-static-openal 'generate-man
+            (lambda _
+              (with-directory-excursion "doc"
+                (invoke "ruby" "docgen.rb" "mangen"))))
+          (add-before 'configure 'chdir
+            (lambda _
+              (chdir "src"))))
           #:tests? #f))
-    (inputs `(("bash-minimal" ,bash-minimal)
-              ("espeak" ,espeak)
-              ("ffmpeg" ,ffmpeg)
-              ("freetype" ,freetype)
-              ("gumbo-parser" ,gumbo-parser)
-              ("harfbuzz" ,harfbuzz)
-              ("jbig2dec" ,jbig2dec)
-              ("leptonica" ,leptonica)
-              ("libdrm" ,libdrm)
-              ("libjpeg-turbo" ,libjpeg-turbo)
-              ("libseccomp" ,libseccomp)
-              ("libusb" ,libusb)
-              ("libvnc" ,libvnc)
-              ("libxkbcommon" ,libxkbcommon)
-              ("luajit" ,luajit)
-              ("mupdf" ,mupdf)
-              ("openal" ,openal)
-              ("openjpeg" ,openjpeg)
-              ("sdl2" ,sdl2)
-              ("sqlite" ,sqlite)
-              ("tesseract-ocr" ,tesseract-ocr)
-              ("vlc" ,vlc)
-              ("wayland" ,wayland)
-              ("wayland-protocols" ,wayland-protocols)
-              ("xcb-util" ,xcb-util)
-              ("xcb-util-wm" ,xcb-util-wm)
-              ("zlib" ,zlib)
-              ;; To build arcan_lwa, we need a patched version of openal.
-              ;; https://github.com/letoram/arcan/wiki/packaging
-              ("arcan-openal"
-               ,(origin
-                  (method git-fetch)
-                  (file-name "arcan-openal-0.6.2")
-                  (uri (git-reference (url
-                                       "https://github.com/letoram/openal")
-                                      (commit "0.6.2")))
-                  (sha256
-                   (base32
-                    "0vg3fda47q2dk1n43ijcc64q39z044pa8h6scmfyi22g6r6bfw2z"))))))
+    (inputs
+     (list bash-minimal
+           espeak
+           ffmpeg-6
+           freetype
+           gumbo-parser
+           harfbuzz
+           jbig2dec
+           leptonica
+           libdrm
+           libjpeg-turbo
+           libseccomp
+           libusb
+           libvnc
+           libxkbcommon
+           luajit
+           mupdf
+           openal
+           openjpeg
+           sdl2
+           sqlite
+           tesseract-ocr
+           vlc
+           wayland
+           wayland-protocols
+           xcb-util
+           xcb-util-wm
+           zlib
+           ;; To build arcan_lwa, we need a patched version of openal.
+           ;; https://github.com/letoram/arcan/wiki/packaging
+           (origin
+             (method git-fetch)
+             (file-name "arcan-openal-checkout")
+             (uri (git-reference (url
+                                  "https://github.com/letoram/openal")
+                                 (commit "0.6.2")))
+             (sha256
+              (base32
+               "0vg3fda47q2dk1n43ijcc64q39z044pa8h6scmfyi22g6r6bfw2z")))))
    (native-inputs (list pkg-config ruby)) ;For documentation and testing
    (home-page "https://arcan-fe.com")
    (synopsis "Display server, multimedia framework and game engine")
@@ -316,5 +315,5 @@ as a window under Arcan.")
    (license (list license:bsd-3 license:expat))))

 ;; Package was merged into arcan in upstream.
-(define-public arcan-wayland
-  (deprecated-package "arcan-wayland" arcan))
+(define-deprecated-package arcan-wayland
+  arcan)
@@ -57,6 +57,7 @@
 ;;; Copyright © 2025 Kjartan Oli Agustsson <kjartanoli@outlook.com>
 ;;; Copyright © 2024 Janneke Nieuwenhuizen <janneke@gnu.org>
 ;;; Copyright © 2025 Antoine Côté <antoine.cote@posteo.net>
+;;; Copyright © 2025 Isidor Zeuner <guix@quidecco.pl>
 ;;;
 ;;; This file is part of GNU Guix.
 ;;;
@@ -251,7 +252,7 @@ promoting the market for advanced audio.")
 (define-public wildmidi
  (package
    (name "wildmidi")
-    (version "0.4.4")
+    (version "0.4.6")
    (source
     (origin
       (method git-fetch)
@@ -261,7 +262,7 @@ promoting the market for advanced audio.")
         (commit (string-append name "-" version))))
       (file-name (git-file-name name version))
       (sha256
-        (base32 "08fbbsvw6pkwwqarjwcvdp8mq4zn5sgahf025hynwc6rvf4sp167"))))
+        (base32 "0cc8vg2alyzakmm132vljx228arisqcnfqh8xyjnnczr5vryqa5k"))))
    (build-system cmake-build-system)
    (arguments
     `(#:tests? #f ; No target
@@ -871,120 +872,129 @@ purposes developed at Queen Mary, University of London.")
    (license license:gpl2+)))

 (define-public jamesdsp
-  (package
-    (name "jamesdsp")
-    (version "2.7.0")
-    (source
-     (origin
-       (method git-fetch)
-       (uri
-        (git-reference
-          (url "https://github.com/Audio4Linux/JDSP4Linux")
-          (commit version)
-          ;; Recurse GraqhicEQWidget, FlatTabWidget, LiquidEqualizerWidget and
-          ;; EELEditor.
-          (recursive? #t)))
-       (file-name (git-file-name name version))
-       (sha256
-        (base32 "17vx12kbvwxvb69vzrlb82mrgf6sl3plyk71g9f39p49ialdsnbr"))
-       (modules '((guix build utils)))
-       (snippet
-        ;; Unbundle 3rd party libraries.
-        '(begin
-           ;; Delete the bundled 3rd party libraries.
-           (for-each delete-file-recursively
-            (list "3rdparty"
-                  "src/subprojects/EELEditor/3rdparty"
-                  "src/subprojects/EELEditor/QCodeEditor"
-                  "src/subprojects/EELEditor/src/EELEditor-Linker.pri"))
-           (with-directory-excursion "src"
-             (substitute* "src.pro"
-               ;; Do not use bundled 3rd party libraries.
-               ((".*3rdparty.*") "")
-               ;; Link required libraries from system.
-               (("-ldl")
-                (string-join '("-ldl"
-                               "-lasync++"
-                               "-lQCodeEditor"
-                               "-lqcustomplot"
-                               "-lqtadvanceddocking-qt6"
-                               "-lqtcsv"
-                               "-lwaf")
-                               " ")))
-             ;; Fix including WAF headers.
-             (substitute* "MainWindow.cpp"
-                       (("<Animation") "<WAF/Animation"))
-             ;; Do not use resources from the bundled docking-system.
-             (substitute* '("interface/fragment/AppManagerFragment.ui")
-               ((".*location.*3rdparty.*") "")
-               ((" resource=.*>") ">"))
-             (with-directory-excursion "subprojects/EELEditor/src"
-               ;; Do not use bundled QCodeEditor and docking-system.
-               (substitute* "EELEditor.pri"
-                 ((".*(QCodeEditor|docking-system).*") ""))
-               ;; Do not link to bundled docking-system.
+  (let ((commit "53cf0989681ba38755208c8aec063f29ed8586d3")
+        (revision "0"))
+    (package
+      (name "jamesdsp")
+      (version (git-version "2.7.0" revision commit))
+      (source
+       (origin
+         (method git-fetch)
+         (uri
+          (git-reference
+            (url "https://github.com/Audio4Linux/JDSP4Linux")
+            (commit commit)
+            ;; Recurse GraqhicEQWidget, FlatTabWidget, LiquidEqualizerWidget and
+            ;; EELEditor.
+            (recursive? #t)))
+         (file-name (git-file-name name version))
+         (sha256
+          (base32 "1b5612gr2gfmj1h5hdzfa9xxdwixia06a34n2zs04cra94clif9i"))
+         (modules '((guix build utils)))
+         (snippet
+          ;; Unbundle 3rd party libraries.
+          '(begin
+             ;; Delete the bundled 3rd party libraries.
+             (for-each delete-file-recursively
+              (list "3rdparty"
+                    "src/subprojects/EELEditor/3rdparty"
+                    "src/subprojects/EELEditor/QCodeEditor"
+                    "src/subprojects/EELEditor/src/EELEditor-Linker.pri"))
+             (with-directory-excursion "src"
               (substitute* "src.pro"
-                 ((".*EELEditor-Linker.*") ""))
-               ;; Fix including headers from the system.
-               (substitute* (find-files "." "\\.(cpp|h)$")
-                 (("#include <Dock") "#include <qtadvanceddocking-qt6/Dock")
-                 (("#include <FloatingDock")
-                  "#include <qtadvanceddocking-qt6/FloatingDock")
-                 (("#include <QSyntaxStyle")
-                  "#include <QCodeEditor/QSyntaxStyle")
-                 (("#include <QStyleSyntaxHighlighter")
-                  "#include <QCodeEditor/QStyleSyntaxHighlighter")
-                 (("#include <QHighlightRule")
-                  "#include <QCodeEditor/QHighlightRule")
-                 (("#include <QLanguage") "#include <QCodeEditor/QLanguage")
-                 (("#include <QCodeEditor\\.hpp")
-                  "#include <QCodeEditor/QCodeEditor.hpp"))))))
-       (patches (search-patches "jamesdsp-fix-bulid-on-pipewire-1.4.0.patch"))))
-    (build-system qt-build-system)
-    (arguments
-     (list #:qtbase qtbase
-           #:tests? #f ;no tests
-           #:phases
-           #~(modify-phases %standard-phases
-               ;; Configure using qmake.
-               (replace 'configure
-                 (lambda* (#:key inputs #:allow-other-keys)
-                   (invoke "qmake" (string-append "PREFIX=" #$output))))
-               (add-after 'install 'install-icon
-                 (lambda _
-                   (let ((pixmaps (string-append #$output "/share/pixmaps")))
-                     (mkdir-p pixmaps)
-                     (copy-file "resources/icons/icon.png"
-                                (string-append pixmaps "/jamesdsp.png")))))
-               (add-after 'install-icon 'create-desktop-entry-file
-                 (lambda _
-                   (make-desktop-entry-file
-                    (string-append #$output
-                                  "/share/applications/jamesdsp.desktop")
-                    #:name "JamesDSP"
-                    #:comment "Audio effect processor"
-                    #:keywords '("equalizer" "audio" "effect")
-                    #:categories '("AudioVideo" "Audio")
-                    #:exec (string-append #$output "/bin/jamesdsp")
-                    #:icon (string-append #$output "/share/pixmaps/jamesdsp.png")
-                    #:startup-notify #f))))))
-    (native-inputs
-     (list pkg-config))
-    (inputs
-     (list asyncplusplus
-           glibmm-2.66
-           libarchive
-           pipewire
-           qcodeeditor
-           qcustomplot
-           qt-advanced-docking-system
-           qtcsv
-           qtpromise
-           qtsvg
-           qtwidgetanimationframework))
-    (home-page "https://github.com/Audio4Linux/JDSP4Linux")
-    (synopsis "Audio effect processor for PipeWire and PulseAudio clients")
-    (description "JamesDSP is an audio effect processor for PipeWire and
+                 ;; Do not use bundled 3rd party libraries.
+                 ((".*3rdparty.*") "")
+                 ;; Link required libraries from system.
+                 (("-ldl")
+                  (string-join '("-ldl"
+                                 "-lasync++"
+                                 "-lQCodeEditor"
+                                 "-lqcustomplot"
+                                 "-lqtadvanceddocking-qt6"
+                                 "-lqtcsv"
+                                 "-lwaf")
+                                 " ")))
+               ;; Fix including WAF headers.
+               (substitute* "MainWindow.cpp"
+                         (("<Animation") "<WAF/Animation"))
+               ;; Do not use resources from the bundled docking-system.
+               (substitute* '("interface/fragment/AppManagerFragment.ui")
+                 ((".*location.*3rdparty.*") "")
+                 ((" resource=.*>") ">"))
+               (with-directory-excursion "subprojects/EELEditor/src"
+                 ;; Do not use bundled QCodeEditor and docking-system.
+                 (substitute* "EELEditor.pri"
+                   ((".*(QCodeEditor|docking-system).*") ""))
+                 ;; Do not link to bundled docking-system.
+                 (substitute* "src.pro"
+                   ((".*EELEditor-Linker.*") ""))
+                 ;; Fix including headers from the system.
+                 (substitute* (find-files "." "\\.(cpp|h)$")
+                   (("#include <Dock") "#include <qtadvanceddocking-qt6/Dock")
+                   (("#include <FloatingDock")
+                    "#include <qtadvanceddocking-qt6/FloatingDock")
+                   (("#include <QSyntaxStyle")
+                    "#include <QCodeEditor/QSyntaxStyle")
+                   (("#include <QStyleSyntaxHighlighter")
+                    "#include <QCodeEditor/QStyleSyntaxHighlighter")
+                   (("#include <QHighlightRule")
+                    "#include <QCodeEditor/QHighlightRule")
+                   (("#include <QLanguage") "#include <QCodeEditor/QLanguage")
+                   (("#include <QCodeEditor\\.hpp")
+                    "#include <QCodeEditor/QCodeEditor.hpp"))))))))
+      (build-system qt-build-system)
+      (arguments
+       (list #:qtbase qtbase
+             #:tests? #f ;no tests
+             #:parallel-build? #f ;fails on some systems
+             #:modules '((guix build qt-build-system)
+                         ((guix build gnu-build-system) #:prefix gnu:)
+                         (guix build utils))
+             #:phases
+             #~(modify-phases %standard-phases
+                 ;; Configure using qmake.
+                 (replace 'configure
+                   (lambda _
+                     (invoke "qmake" (string-append "PREFIX=" #$output))))
+                 (replace 'build (assoc-ref gnu:%standard-phases 'build))
+                 (replace 'check (assoc-ref gnu:%standard-phases 'check))
+                 (replace 'install (assoc-ref gnu:%standard-phases 'install))
+                 (add-after 'install 'install-icon
+                   (lambda _
+                     (let ((pixmaps (string-append #$output "/share/pixmaps")))
+                       (mkdir-p pixmaps)
+                       (copy-file "resources/icons/icon.png"
+                                  (string-append pixmaps "/jamesdsp.png")))))
+                 (add-after 'install-icon 'create-desktop-entry-file
+                   (lambda _
+                     (make-desktop-entry-file
+                      (string-append #$output
+                                    "/share/applications/jamesdsp.desktop")
+                      #:name "JamesDSP"
+                      #:comment "Audio effect processor"
+                      #:keywords '("equalizer" "audio" "effect")
+                      #:categories '("AudioVideo" "Audio")
+                      #:exec (string-append #$output "/bin/jamesdsp")
+                      #:icon (string-append #$output
+                                            "/share/pixmaps/jamesdsp.png")
+                      #:startup-notify #f))))))
+      (native-inputs
+       (list pkg-config))
+      (inputs
+       (list asyncplusplus
+             glibmm-2.66
+             libarchive
+             pipewire
+             qcodeeditor
+             qcustomplot
+             qt-advanced-docking-system
+             qtcsv
+             qtpromise
+             qtsvg
+             qtwidgetanimationframework))
+      (home-page "https://github.com/Audio4Linux/JDSP4Linux")
+      (synopsis "Audio effect processor for PipeWire and PulseAudio clients")
+      (description "JamesDSP is an audio effect processor for PipeWire and
 PulseAudio clients, featuring:
@itemize
@item Automatic bass boost: Frequency-detecting bass-boost
@@ -1006,7 +1016,7 @@ PulseAudio clients, featuring:
 dynamic code outline window, console output support and detailed error
 messages with inline code highlighting
@end itemize")
-    (license license:gpl3+)))
+      (license license:gpl3+))))

 (define ardour-bundled-media
  (origin
@@ -1157,6 +1167,16 @@ namespace ARDOUR { const char* revision = \"" version "\" ; const char* date = \
           perl
           pkg-config
           unzip))
+    (native-search-paths
+     (list (search-path-specification
+            (variable "LADSPA_PATH")
+            (files '("lib/ladspa")))
+           (search-path-specification
+            (variable "LV2_PATH")
+            (files '("lib/lv2")))
+           (search-path-specification
+            (variable "LXVST_PATH")
+            (files '("lib/lxvst")))))
    (home-page "https://ardour.org")
    (synopsis "Digital audio workstation")
    (description
@@ -1595,7 +1615,7 @@ plugins are provided.")
 (define-public cable
  (package
    (name "cable")
-    (version "0.9.8.1")
+    (version "0.9.21")
    (source (origin
              (method git-fetch)
              (uri (git-reference
@@ -1604,10 +1624,7 @@ plugins are provided.")
              (file-name (git-file-name name version))
              (sha256
               (base32
-                "0pzafiim1cnxrngk6nzmpx9sx1lc6qrqjrrcxg1qpigcrjvrfjs2"))
-              (modules '((guix build utils)))
-              (snippet
-               '(delete-file-recursively "Arch packages"))))
+                "1c7fy92nwp2m96asls460s83xapzcc6pqvplmg5rqds1rddiva2h"))))
    (build-system pyproject-build-system)
    (arguments
     (list
@@ -1628,21 +1645,7 @@ plugins are provided.")
              (install-file "jack-plug.svg"
                            (string-append #$output "/share/icons/hicolor/scalable/apps/"))
              (install-file "com.github.magillos.cable.desktop"
-                            (string-append #$output "/share/applications/"))))
-          (add-after 'install-more 'wrap-executables
-            (lambda* (#:key inputs #:allow-other-keys)
-              (let* ((pyversion
-                      #$(version-major+minor (package-version
-                                              (this-package-input "python"))))
-                     (lib (string-append #$output "/lib/python" pyversion
-                                         "/site-packages"))
-                     (file
-                      (string-append lib "/cables/launch-connection-manager.py")))
-                (chmod file #o555)
-                (wrap-script file
-                  #:guile (search-input-file inputs "bin/guile")
-                  `("GUIX_PYTHONPATH" ":" prefix
-                    (,lib  ,(getenv "GUIX_PYTHONPATH"))))))))))
+                            (string-append #$output "/share/applications/")))))))
    (inputs
     (list python
           python-dbus
@@ -1663,7 +1666,7 @@ connections manager, pw-top wrapper, simple ALSA mixer and jack_delay GUI.")
 (define-public calf
  (package
    (name "calf")
-    (version "0.90.6")
+    (version "0.90.8")
    (source (origin
              (method git-fetch)
              (uri (git-reference
@@ -1672,7 +1675,7 @@ connections manager, pw-top wrapper, simple ALSA mixer and jack_delay GUI.")
              (file-name (git-file-name name version))
              (sha256
               (base32
-                "0p4zqzr7spy3jjsmy6h7n5lsyqqyh23bswk1r3kims50b102xhxd"))))
+                "0wzkshqazw26w73h1lva5wr8v2bq0a20kjd6lfvbi1pj3ql3azk5"))))
    (build-system cmake-build-system)
    (arguments (list #:tests? #false)) ;there is no test target
    (inputs
@@ -1828,7 +1831,7 @@ reel-to-reel tape machines.")
 (define-public iir
  (package
    (name "iir")
-    (version "1.9.4")
+    (version "1.10.0")
    (source
     (origin
       (method git-fetch)
@@ -1837,7 +1840,7 @@ reel-to-reel tape machines.")
             (commit version)))
       (file-name (git-file-name name version))
       (sha256
-        (base32 "1fqxn0qlvykpk9hiliivmkjjcz3g1bp83yd0zfm82r14abkjbj2g"))))
+        (base32 "0p64l0fmr7mfjhfxg6yc4f06aacbr6bb8kjmb5ffm95sq12rzdss"))))
    (build-system cmake-build-system)
    (arguments
     (list
@@ -2368,7 +2371,7 @@ the non-linear circuit elements of their original analog counterparts.")
 (define-public rev-plugins
  (package
    (name "rev-plugins")
-    (version "0.7.1")
+    (version "0.8.1")
    (source (origin
              (method url-fetch)
              (uri (string-append
@@ -2377,23 +2380,24 @@ the non-linear circuit elements of their original analog counterparts.")
                    version ".tar.bz2"))
              (sha256
               (base32
-                "1ikpinxm00pkfi259bnkzhsy3miagrjgdihaaf5x4v7zac29j3g7"))))
+                "1yhnvjgr14qr0ni0n2x8dhlzbx1qfgyrnffbaaq0d5xbzfgrq543"))))
    (build-system gnu-build-system)
    (arguments
-     `(#:tests? #f ; no "check" target
-       #:phases
-       (modify-phases %standard-phases
-         ;; no configure script
-         (delete 'configure)
-         (add-before 'install 'prepare-target-directory
-           (lambda* (#:key outputs #:allow-other-keys)
-             (mkdir-p (string-append (assoc-ref outputs "out") "/lib/ladspa"))
-             #t))
-         (add-after 'unpack 'override-target-directory
-           (lambda* (#:key outputs #:allow-other-keys)
-             (substitute* "Makefile"
-               (("/usr") (assoc-ref outputs "out")))
-             #t)))))
+     (list #:tests? #f ; no "check" target
+           #:phases
+           #~(modify-phases %standard-phases
+               ;; no configure script
+               (delete 'configure)
+               (add-after 'unpack 'change-directory
+                 (lambda _
+                   (chdir "source")))
+               (add-after 'change-directory 'override-target-directory
+                 (lambda _
+                   (substitute* "Makefile"
+                     (("/usr") #$output))))
+               (add-before 'install 'prepare-target-directory
+                 (lambda _
+                   (mkdir-p (string-append #$output "/lib/ladspa")))))))
    (home-page "https://kokkinizita.linuxaudio.org")
    (synopsis "LADSPA reverb plugin")
    (description
@@ -2707,7 +2711,7 @@ also play midifiles using a Soundfont.")
 (define-public faust-2
  (package
    (inherit faust)
-    (version "2.75.7")
+    (version "2.81.10")
    (source (origin
              (method url-fetch)
              (uri (string-append "https://github.com/grame-cncm/faust/"
@@ -2715,7 +2719,7 @@ also play midifiles using a Soundfont.")
                                  "/faust-" version ".tar.gz"))
              (sha256
               (base32
-                "11ww02zmj3vnva1w52hs9wkxvhwwf53agklyzm2c7gysw0jfvkw9"))))
+                "0mj7gn7xp6mzr94nqcyrrkcmzm81chq6qb1n76wspah71lw7g6f6"))))
    (build-system cmake-build-system)
    (arguments
     (list
@@ -3141,7 +3145,7 @@ and testing or configuring the JACK session.  Tools include @code{jack_lsp},
 (define-public jacktrip
  (package
    (name "jacktrip")
-    (version "1.6.8")
+    (version "2.7.1")
    (source (origin
              (method git-fetch)
              (uri (git-reference
@@ -3149,7 +3153,7 @@ and testing or configuring the JACK session.  Tools include @code{jack_lsp},
                    (commit (string-append "v" version))))
              (file-name (git-file-name name version))
              (sha256
-               (base32 "0719ng799kingv0y9yk07bvnmprk25c09ph3yaia5dhapg0jz17m"))))
+               (base32 "1d9cn4nny3kbf3f9x0bcsrqb0ir1h789nv7s72xmhf7r5rfd9xm4"))))
    (build-system gnu-build-system)
    (arguments
     (list
@@ -3168,10 +3172,11 @@ and testing or configuring the JACK session.  Tools include @code{jack_lsp},
           python
           python-jinja2
           python-pyyaml
-           qtbase-5
+           qtbase
+           qtwayland
           rtaudio))
    (native-inputs
-     (list pkg-config qtbase-5)) ;for qmake
+     (list pkg-config))
    (home-page "https://jacktrip.github.io/jacktrip/")
    (synopsis "Multi-machine audio system for network music performance")
    (description
@@ -3253,25 +3258,30 @@ from being able to mix multiple JACK audio streams.")
                "1q8mzjv577vdi64s47gd4pg0ydzxvs32cwrb1d64v90f52qpgbpd"))))
    (build-system meson-build-system)
    (arguments
-     `(#:tests? #f                      ; no check target
-       #:phases
-       (modify-phases %standard-phases
-         (add-before 'configure 'build-PIC
-           ;; The default -fPIE #errors when combined with our Qt packages.
-           ;; Work around the broken meson.build script clobbering c_args.
-           (lambda _
-             (substitute* "meson.build"
-               (("'-DZIX_STATIC'" match)
-                (string-append match ", '-fPIC'"))))))))
+     (list #:tests? #f                      ; no check target
+           #:phases
+           #~(modify-phases %standard-phases
+               (add-before 'configure 'build-PIC
+                 ;; The default -fPIE #errors when combined with our Qt
+                 ;; packages.  Work around the broken meson.build script
+                 ;; clobbering c_args.
+                 (lambda _
+                   (substitute* "meson.build"
+                     (("'-DZIX_STATIC'" match)
+                      (string-append match ", '-fPIC'"))))))))
    (inputs
     (list lv2
           lilv
           suil
           gtk+
-           qtbase-5
-           jack-1))
+           jack-1
+           qtbase-5))
    (native-inputs
     (list pkg-config))
+    (native-search-paths
+     (list (search-path-specification
+            (variable "LV2_PATH")
+            (files '("lib/lv2")))))
    (home-page "https://drobilla.net/software/jalv.html")
    (synopsis "Simple LV2 host for JACK")
    (description
@@ -3535,6 +3545,7 @@ compensation, (de)interleaving, and byte-swapping
    (build-system pyproject-build-system)
    (arguments
     (list
+      #:tests? #f ;no test target
      #:phases
      #~(modify-phases %standard-phases
          (add-after 'unpack 'find-library
@@ -3724,13 +3735,13 @@ CFFI and NumPy.")
 (define-public python-soxr
  (package
    (name "python-soxr")
-    (version "0.5.0.post1")
+    (version "1.0.0")
    (source
     (origin
       (method url-fetch)
       (uri (pypi-uri "soxr" version))
       (sha256
-        (base32 "0wzz7j0z814mm99xr19vfrwp2x904lbwhf513x7085m4x3rvk4kh"))))
+        (base32 "02a5balcm8dvlb938gl2k3kqvfdq1k300j2g0dbnkg2rsv0yczp0"))))
    (build-system pyproject-build-system)
    (arguments
     (list
@@ -3758,7 +3769,6 @@ CFFI and NumPy.")
                         python-scikit-build-core
                         python-setuptools
                         python-setuptools-scm
-                         python-sphinx
                         python-typing-extensions
                         python-wheel))
    (home-page "https://github.com/dofuuz/python-soxr")
@@ -4276,14 +4286,14 @@ different audio devices such as ALSA or PulseAudio.")
 (define-public qjackctl
  (package
    (name "qjackctl")
-    (version "1.0.3")
+    (version "1.0.4")
    (source (origin
              (method url-fetch)
              (uri (string-append "mirror://sourceforge/qjackctl/qjackctl/"
                                  version "/qjackctl-" version ".tar.gz"))
              (sha256
               (base32
-                "0wzimnxb9yjj155l0hqb57smf0158a4bbzi6bj11pp60njld4zqn"))))
+                "1bhlfnlvqgircnlq014whaka01ki6ja44xzynjbwszclknc6zsz3"))))
    (build-system cmake-build-system)
    (arguments
     '(#:tests? #f))                    ; no check target
@@ -4377,6 +4387,7 @@ link REQUIRED)"))))))
       "ide"))                          ;qt ide
    (arguments
     (list
+      #:qtbase qtbase
      #:configure-flags
      #~(list "-DSYSTEM_BOOST=ON"
              "-DSYSTEM_YAMLCPP=ON"
@@ -5623,6 +5634,42 @@ encoder used for an MPEG Layer III (MP3) file, as well as scan any MPEG audio
 file (any layer) and print a lot of useful information.")
    (license license:lgpl2.1+)))

+(define-public mp3cat
+  (package
+    (name "mp3cat")
+    (version "0.5")
+    (source
+     (origin
+       (method git-fetch)
+       (uri (git-reference
+             (url "https://github.com/tomclegg/mp3cat")
+             (commit version)))
+       (file-name (git-file-name name version))
+       (sha256
+        (base32 "0n6hjg2wgd06m561zc3ib5w2m3pwpf74njv2b2w4sqqh5md2ymfr"))))
+    (build-system gnu-build-system)
+    (arguments
+     (list
+      #:tests? #f ;upstream defines no tests
+      #:make-flags
+      #~(list (string-append "PREFIX="
+                             #$output))
+      #:phases
+      #~(modify-phases %standard-phases
+          (delete 'configure)
+          (add-before 'build 'patch-makefile
+            (lambda _args
+              (substitute* "Makefile"
+                (("cc")
+                 #$(cc-for-target))))))))
+    (home-page "http://tomclegg.net/mp3cat")
+    (synopsis "MP3 stream copier and concatenator")
+    (description
+     "Copies a stream, skipping everything except MP3 frames with valid
+headers.  This can be used to copy and concatenate streams, even if
+they contain extra garbage.")
+    (license license:gpl2+)))
+
 (define-public shntool
  (package
    (name "shntool")
@@ -5928,7 +5975,7 @@ kbps at 24 bit/96 kHz.")
 (define-public bluez-alsa
  (package
    (name "bluez-alsa")
-    (version "3.0.0")
+    (version "4.3.1")
    (source (origin
              ;; The tarballs are mere snapshots and don't contain a
              ;; bootstrapped build system.
@@ -5939,7 +5986,7 @@ kbps at 24 bit/96 kHz.")
              (file-name (git-file-name name version))
              (sha256
               (base32
-                "1jlsgxyqfhncfhx1sy3ry0dp6p95kd4agh7g2b7g51h0c4cv74h8"))))
+                "05qzmcsihhd92vpjd45qr0gdzfqiw4jfcdjdg78mzimv9g5g3rjm"))))
    (build-system gnu-build-system)
    (arguments
     `(#:configure-flags
@@ -5951,7 +5998,12 @@ kbps at 24 bit/96 kHz.")
                            (assoc-ref %outputs "out")
                            "/etc/dbus-1/system.d"))))
    (native-inputs
-     (list autoconf automake libtool pkg-config))
+     (list autoconf
+           automake
+           `(,glib "bin")
+           libtool
+           pkg-config
+           python-minimal))
    (inputs
     (list alsa-lib
           bluez
@@ -6039,26 +6091,50 @@ customized and extended using either the s7 Scheme implementation (included in
 the Snd sources), Ruby, or Forth.")
    (license (license:non-copyleft "file://COPYING"))))

+(define-public libspecbleach
+  (package
+    (name "libspecbleach")
+    (version "0.1.6")
+    (source (origin
+              (method git-fetch)
+              (uri (git-reference
+                    (url "https://github.com/lucianodato/libspecbleach")
+                    (commit (string-append "v" version))))
+              (file-name (git-file-name name version))
+              (sha256
+               (base32
+                "0czmzhggg5gl833karfrl2c0pr2k3jf7q7jd3y68hyj0cnn6f3jg"))))
+    (build-system meson-build-system)
+    (native-inputs
+     (list pkg-config))
+    (inputs
+     (list fftwf))
+    (home-page "https://github.com/lucianodato/libspecbleach")
+    (synopsis "C library for audio noise reduction and other spectral effects")
+    (description
+     "This package provides a C library for audio noise reduction and other
+spectral effects.  It is based on the algorithms that were used in
+@code{noise-repellent}.  These were extracted into a this standalone library to
+remove the lv2 dependency.  It uses the concept of a spectral processor which
+itself uses a @acronym{STFT, short time Fourier transform} to process the audio.")
+    (license license:lgpl2.1+)))
+
 (define-public noise-repellent
  (package
    (name "noise-repellent")
-    (version "0.1.5")
+    (version "0.2.3")
    (source (origin
              (method git-fetch)
              (uri (git-reference
                    (url "https://github.com/lucianodato/noise-repellent")
-                    (commit version)))
-              (file-name (string-append name "-" version "-checkout"))
+                    (commit (string-append "v" version))))
+              (file-name (git-file-name name version))
              (sha256
               (base32
-                "0hb89x9i2knzan46q4nwscf5zmnb2nwf4w13xl2c0y1mx1ls1mwl"))))
+                "0dq0rv7mndw0lqacl2nf9dmj4zzq19hfminzk3fzbppk5mh2rivp"))))
    (build-system meson-build-system)
-    (arguments
-     `(#:configure-flags
-       (list (string-append "--prefix=" (assoc-ref %outputs "out")
-                            "/lib/lv2"))))
    (inputs
-     (list lv2 fftwf))
+     (list fftwf libspecbleach lv2))
    (native-inputs
     (list pkg-config))
    (home-page "https://github.com/lucianodato/noise-repellent")
@@ -6182,7 +6258,7 @@ representations.")
 (define-public cava
  (package
    (name "cava")
-    (version "0.10.4")
+    (version "0.10.6")
    (source (origin
              (method git-fetch)
              (uri (git-reference
@@ -6191,7 +6267,7 @@ representations.")
              (file-name (git-file-name name version))
              (sha256
               (base32
-                "09wwzqynfmdzn77vxxmrw2z0yz95p4zg9cgfp9vnpv70visi98d0"))))
+                "12ysxbm1di2m0qac4rgd5f94fvlxv64s7kyy5s0d2bbxyzvdcqvm"))))
    (build-system gnu-build-system)
    (native-inputs (list autoconf automake libtool pkg-config))
    (inputs (list alsa-lib fftw ncurses pipewire pulseaudio iniparser
@@ -6320,16 +6396,16 @@ library supports sample rates up to 96 kHz and up to eight channels (7.1
 (define-public libfreeaptx
  (package
    (name "libfreeaptx")
-    (version "0.1.1")
+    (version "0.2.2")
    (source (origin
              (method git-fetch)
              (uri (git-reference
-                    (url "https://github.com/iamthehorker/libfreeaptx")
+                    (url "https://github.com/regularhunter/libfreeaptx")
                    (commit version)))
              (file-name (git-file-name name version))
              (sha256
               (base32
-                "1fm5041nd08yzg0m9474g0943lb3x54zmn59b53nhvxan8x22ibq"))))
+                "0xk247w2l7jd51rbavqnmqk6sqnifhf46k4wwfj572pz7k9cbmly"))))
    (build-system gnu-build-system)
    (arguments
     (list #:tests? #f ;no tests.
@@ -6341,8 +6417,8 @@ library supports sample rates up to 96 kHz and up to eight channels (7.1
           #:phases
           #~(modify-phases %standard-phases
               (delete 'configure))))
-    (home-page "https://github.com/iamthehorker/libfreeaptx")
-    (synopsis "aptX codec library")
+    (home-page "https://github.com/regularhunter/libfreeaptx")
+    (synopsis "Free implementation of aptX")
    (description "libfreeaptx is an implementation of the Audio Processing
 Technology codecs aptX and aptX HD, mainly intended for use with an A2DP
 bluetooth profile.")
@@ -6442,7 +6518,7 @@ other Gnaural instances, allowing synchronous sessions between many users.")
 (define-public darkice
  (package
    (name "darkice")
-    (version "1.4")
+    (version "1.5")
    (source (origin
              (method url-fetch)
              (uri (string-append "https://github.com/rafael2k/darkice/releases/"
@@ -6450,7 +6526,7 @@ other Gnaural instances, allowing synchronous sessions between many users.")
                                  version ".tar.gz"))
              (sha256
               (base32
-                "05yq7lggxygrkd76yiqby3msrgdn082p0qlvmzzv9xbw8hmyra76"))))
+                "13h58skz5xik75sjv9kf2299haly2nc5gswl22ff1kvw79bw9d0q"))))
    (build-system gnu-build-system)
    (native-inputs (list pkg-config))
    (inputs (list lame
@@ -7200,17 +7276,13 @@ Rate} 3600x2250 bit/s vocoder used in various radio systems.")
    (native-inputs
     (list catch-framework
           python ;for running tests
-           portaudio ;for portaudio examples
-           qtbase-5 ;for Qt examples
-           qtdeclarative-5
-           qttools-5))
+           portaudio)) ;for portaudio examples
    (inputs
-     (list jack-1 ;for JACK examples
-           qtquickcontrols-5)) ;for Qt examples
+     (list jack-1)) ;for JACK examples
    (propagated-inputs
     ;; This is because include/ableton/platforms/asio/AsioWrapper.hpp
     ;; contains '#include <asio.hpp>'.
-     (list asio))
+     (list asio-1.28))
    (arguments
     `(#:configure-flags
       '("-DLINK_BUILD_QT_EXAMPLES=ON"
@@ -7268,14 +7340,14 @@ while still staying in time.")
 (define-public butt
  (package
    (name "butt")
-    (version "0.1.38")
+    (version "1.45.0")
    (source (origin
              (method url-fetch)
-              (uri (string-append "mirror://sourceforge/butt/butt/butt-"
+              (uri (string-append "https://danielnoethen.de/butt/release/"
                                  version "/butt-" version ".tar.gz"))
              (sha256
               (base32
-                "10i3xpxzccdl4pidiyymw9cfavhy50yhn7xi5bd77y91f2903kp9"))
+                "0r43xph6xf02c9zldhyj82mvy82xv0f9wbv653gg2kkcjh88ajc8"))
              (modules '((guix build utils)))
              (snippet
               '(substitute* "src/butt.cpp"
@@ -7286,19 +7358,21 @@ while still staying in time.")
           #~(modify-phases %standard-phases
               (add-after 'install 'install-documentation
                 (lambda _
-                   (let ((doc (string-append #$output "/share/doc/" #$name)))
+                   (let ((doc (string-append #$output:doc "/share/doc/" #$name)))
                     (install-file "README" doc)
                     (copy-file #$(this-package-native-input "manual")
                                (string-append doc "/butt-manual.pdf"))))))))
+    (outputs '("out" "doc"))
    (native-inputs
     `(("pkg-config" ,pkg-config)
       ("manual"
        ,(origin
           (method url-fetch)
-           (uri (string-append "https://danielnoethen.de/butt/butt-"
+           (uri (string-append "https://danielnoethen.de/butt/release/" version
+                               "/butt-"
                               version "_manual.pdf"))
           (sha256
-            (base32 "04aixxqshfj11ja3ifh0zvywl2mqzmymppcd0xj8sv0j7whjibaq"))))))
+            (base32 "07mr25k26xrpns3s7ci27jmp71c49a23r0mi662ir5v35rz4bf4q"))))))
    (inputs
     (list curl
           dbus
@@ -7316,7 +7390,8 @@ while still staying in time.")
           libogg
           openssl
           opus
-           portaudio))
+           portaudio
+           portmidi-2))
    (home-page "https://danielnoethen.de/butt/")
    (synopsis "Audio streaming tool")
    (description "Butt is a tool to stream audio to a ShoutCast or
@@ -7450,7 +7525,7 @@ Home Page}.")
 (define-public python-librosa
  (package
    (name "python-librosa")
-    (version "0.10.2.post1")
+    (version "0.11.0")
    (source
     (origin
       (method git-fetch)
@@ -7460,7 +7535,7 @@ Home Page}.")
             ;; For test files.
             (recursive? #true)))
       (sha256
-        (base32 "1x37148y1rh4sq2nc59iw9jlza3zwawxnlb7bd9w36an05aclmnh"))))
+        (base32 "065x43hx670rjrclxi4hiqxscllb16v9s7myjvg7rd5pd3y0k7sg"))))
    (build-system pyproject-build-system)
    (arguments
     (list
@@ -7589,7 +7664,7 @@ and DSD streams.")
 (define-public qpwgraph
  (package
    (name "qpwgraph")
-    (version "0.8.0")
+    (version "0.9.6")
    (source (origin
              (method git-fetch)
              (uri (git-reference
@@ -7598,7 +7673,7 @@ and DSD streams.")
              (file-name (git-file-name name version))
              (sha256
               (base32
-                "036qzc2sjxa1lvysf7shyjkp1jyjkpalgxf74bgyzm89phqac7cc"))))
+                "17f84qp0vphw0qbgi4yzvws19cw1lppn5r35niy032gw8qr7l6nf"))))
    (build-system cmake-build-system)
    (arguments
     (list #:tests? #f))                ; no tests
@@ -157,7 +157,7 @@ know anything about Autoconf or M4.")
       (base32
        "0niz4852fgyavfh3gr4h4kzalk01nk70v6vfsja6r3ap349mr25s"))))))

-(define-public autoconf autoconf-2.69)
+(define-public autoconf autoconf-2.72)

 (define-public autoconf-2.68
  (package (inherit autoconf)
@@ -438,14 +438,14 @@ Makefile, simplifying the entire process for the developer.")
 (define-public automake
  (package/inherit automake-1.16.5
    (name "automake")
-    (version "1.17")
+    (version "1.18.1")
    (source (origin
              (method url-fetch)
              (uri (string-append "mirror://gnu/automake/automake-"
                                  version ".tar.xz"))
              (sha256
               (base32
-                "146rkdcwri2dkwn3pjrjs9v0wm4xyav9vvq4yw5vj4qy87yc2849"))
+                "11v8ckqx7z8hv4mq9dnhg58cwnssaa7l9136yndbhlc34xis72hn"))
              (patches
               (search-patches "automake-skip-amhello-tests.patch"))))
    (arguments
@@ -483,16 +483,14 @@ Makefile, simplifying the entire process for the developer.")
 (define-public libtool
  (package
    (name "libtool")
-    (version "2.4.7")
+    (version "2.5.4")
    (source (origin
              (method url-fetch)
              (uri (string-append "mirror://gnu/libtool/libtool-"
                                  version ".tar.xz"))
              (sha256
               (base32
-                "0pb3l4x37k6fj1lwnpzws55gi3pxl0hx56jm4bzmbrkw0mzj2zsg"))
-              (patches (search-patches "libtool-skip-tests2.patch"
-                                       "libtool-grep-compat.patch"))))
+                "0xb64rhambx6mhxwr613xgyad7ybs5hgmpmd9gccf2vbcrh5h7zq"))))
    (build-system gnu-build-system)
    (propagated-inputs (list m4))
    (native-inputs
@@ -518,6 +516,12 @@ Makefile, simplifying the entire process for the developer.")

       #:phases
       (modify-phases %standard-phases
+         (add-after 'unpack 'skip-some-tests-on-extra-archs
+           (lambda _
+             (with-directory-excursion "tests"
+               (substitute* '("demo.at" "testsuite")
+                 (("hppa\\*\\|amd64\\*\\|x86_64\\*\\|s390\\*" all)
+                  (string-append all "|arm*|mips*|riscv*"))))))
         (add-before 'check 'pre-check
           (lambda* (#:key inputs native-inputs parallel-tests? #:allow-other-keys)
             ;; Run the test suite in parallel, if possible.
@@ -662,5 +662,5 @@ with some layout changes and added features.

 This package provides the patcher application.")))

-(define-public axoloti-patcher-next
-  (deprecated-package "axoloti-patcher-next" ksoloti-patcher))
+(define-deprecated-package axoloti-patcher-next
+  ksoloti-patcher)
@@ -21,10 +21,10 @@
 ;;; Copyright © 2021 Timothy Sample <samplet@ngyro.com>
 ;;; Copyright © 2021 Brice Waegeneire <brice@waegenei.re>
 ;;; Copyright © 2021 Sarah Morgensen <iskarian@mgsn.dev>
-;;; Copyright © 2022 Maxim Cournoyer <maxim@guixotic.coop>
+;;; Copyright © 2022, 2025 Maxim Cournoyer <maxim@guixotic.coop>
 ;;; Copyright © 2022 Feng Shu <tumashu@163.com>
 ;;; Copyright © 2023 Timo Wilken <guix@twilken.net>
-;;; Copyright © 2024 Nicolas Graves <ngraves@ngraves.fr>
+;;; Copyright © 2023-2024 Nicolas Graves <ngraves@ngraves.fr>
 ;;; Copyright © 2024 jgart <jgart@dismail.de>
 ;;; Copyright © 2025 Kjartan Oli Agustsson <kjartanoli@outlook.com>
 ;;; Copyright © 2025 mstenek <mstenek@disroot.org>
@@ -54,7 +54,6 @@
  #:use-module (guix build-system qt)
  #:use-module (guix download)
  #:use-module (guix gexp)
-  #:use-module (guix gexp)
  #:use-module (guix git-download)
  #:use-module (guix packages)
  #:use-module (guix utils)
@@ -109,7 +108,8 @@
  #:use-module (gnu packages time)
  #:use-module (gnu packages tls)
  #:use-module (gnu packages valgrind)
-  #:use-module (gnu packages xml))
+  #:use-module (gnu packages xml)
+  #:use-module (ice-9 format))

 (define-public duplicity
  (package
@@ -264,7 +264,7 @@ backups (called chunks) to allow easy burning to CD/DVD.")
 (define-public libarchive
  (package
    (name "libarchive")
-    (version "3.7.7")
+    (version "3.8.3")
    (source
     (origin
       (method url-fetch)
@@ -275,7 +275,7 @@ backups (called chunks) to allow easy burning to CD/DVD.")
                                 version ".tar.xz")))
       (sha256
        (base32
-         "1vps57mrpqmrk4zayh5g5amqfq7031s5zzkkxsm7r71rqf1wv6l7"))))
+         "124pp4w6n8xqdwjswc5d4d6kkrgxv67f9xlhgg7934zii4mizqlh"))))
    (build-system gnu-build-system)
    (inputs
     (list bzip2
@@ -287,63 +287,52 @@ backups (called chunks) to allow easy burning to CD/DVD.")
           `(,zstd "lib")))
    (arguments
     (list
+      ;; Embed absolute references to inputs to avoid propagation.
      #:configure-flags
-      #~'("--disable-static"
-          ;; Because of the circular dependency, we cannot use openssl here.
-          ;; Explicitly disable openssl to avoid unnecessary dependencies in the
-          ;; pc file.
-          "--without-openssl")
+      #~(list "--disable-static"
+              (format #f "LIBS=~{-L~a/lib~^ ~}"
+                      '#$(map (lambda (x)
+                                (this-package-input (car x)))
+                              (package-inputs this-package)))
+              ;; Because of the circular dependency, we cannot use openssl here.
+              ;; Explicitly disable openssl to avoid unnecessary dependencies in the
+              ;; pc file.
+              "--without-openssl")
      #:phases
      #~(modify-phases %standard-phases
-          (add-before 'build 'patch-pwd
+          (add-before 'build 'patch-commands
            (lambda _
              (substitute* "Makefile"
-                (("/bin/pwd") (which "pwd")))))
+                (("/bin/pwd") (which "pwd")))
+              (substitute* "test_utils/test_main.c"
+                (("/bin/sh") (which "sh")))))
          (replace 'check
-            (lambda* (#:key tests? #:allow-other-keys)
+            (lambda* (#:key parallel-build? tests? #:allow-other-keys)
              (if tests?
-		  ;; XXX: The test_owner_parse, test_read_disk, and
-		  ;; test_write_disk_lookup tests expect user 'root' to
-		  ;; exist, but the chroot's /etc/passwd doesn't have
-		  ;; it.  Turn off those tests.
                  (begin
-		    ;; The tests allow one to disable tests matching a globbing pattern.
-		    (invoke "make"
+                    ;; These environment variables are taken from
+                    ;; <https://raw.githubusercontent.com/libarchive/libarchive/refs/heads/master/.github/workflows/ci.yml>
+                    (setenv "SKIP_OPEN_FD_ERR_TEST" "1")
+                    (setenv "IGNORE_TRAVERSALS_TEST4" "1")
+
+		    ;; XXX: The test_owner_parse, test_read_disk, and
+		    ;; test_write_disk_lookup tests expect user 'root' to
+		    ;; exist, but the chroot's /etc/passwd doesn't have it
+		    ;; (see:
+		    ;; <https://github.com/libarchive/libarchive/issues/2794>).
+		    (invoke "make" "-j" (number->string
+                                         (if parallel-build?
+                                             (parallel-job-count)
+                                             1))
 			    "libarchive_test"
 			    "bsdcpio_test"
 			    "bsdtar_test")
-
 		    ;; XXX: This glob disables too much.
 		    (invoke "./libarchive_test" "^test_*_disk*")
 		    (invoke "./bsdcpio_test" "^test_owner_parse")
 		    (invoke "./bsdtar_test"))
                  ;; Tests may be disabled if cross-compiling.
-                  (format #t "Test suite not run.~%"))))
-          (add-after 'install 'add--L-in-libarchive-pc
-            (lambda* (#:key inputs outputs #:allow-other-keys)
-              (let* ((out     #$output)
-                     (lib     (string-append out "/lib"))
-                     (nettle  (assoc-ref inputs "nettle"))
-                     (libxml2 (assoc-ref inputs "libxml2"))
-                     (xz      (assoc-ref inputs "xz"))
-                     (zlib    (assoc-ref inputs "zlib"))
-                     (zstd    (assoc-ref inputs "zstd"))
-                     (bzip2   (assoc-ref inputs "bzip2")))
-                ;; Embed absolute references to these inputs to avoid propagation.
-                (substitute* (list (string-append lib "/pkgconfig/libarchive.pc")
-                                   (string-append lib "/libarchive.la"))
-                  (("-lnettle")
-                   (string-append "-L" nettle "/lib -lnettle"))
-                  (("-lxml2")
-                   (string-append "-L" libxml2 "/lib -lxml2"))
-                  (("-llzma")
-                   (string-append "-L" xz "/lib -llzma"))
-                  (("-lz")
-                   (string-append "-L" zlib "/lib -lz"))
-                  (("-lzstd")
-                   (string-append "-L" zstd "/lib -lzstd"))
-                  (("-lbz2")
-                   (string-append "-L" bzip2 "/lib -lbz2")))))))))
+                  (format #t "Test suite not run.~%")))))))
    (home-page "https://libarchive.org/")
    (synopsis "Multi-format archive and compression library")
    (description
@@ -107,6 +107,7 @@
              (sha256
               (base32
                "1aqq1379syjckf0wdn9vs6wfbapnj9zfikhiykf29k4jq9nrk6js"))))
+    (outputs (list "out" "debug"))
    (build-system gnu-build-system)
    (synopsis "Example GNU package")
    (description
@@ -133,15 +134,6 @@ command-line arguments, multiple languages, and so on.")
   (inputs (list pcre2))
   (arguments
    (list #:configure-flags #~(list "--enable-perl-regexp")
-
-          ;; XXX: On 32-bit Hurd platforms, 'time_t' is defined as a 32-bit
-          ;; integer in 'hurd_types.defs', so this Gnulib test always fails.
-          #:make-flags
-          #~#$(if (and (not (%current-target-system))
-                       (string=? (%current-system) "i586-gnu"))
-                  #~'("XFAIL_TESTS=test-year2038")
-                  #~'())
-
          #:phases
          #~(modify-phases %standard-phases
              (add-after 'install 'fix-egrep-and-fgrep
@@ -161,6 +153,17 @@ command-line arguments, multiple languages, and so on.")
                            (substitute* "lib/sigsegv.in.h"
                              (("__GNU__") "__XGNU__")))))
                     #~())
+              ;; XXX: On 32-bit Hurd platforms, 'time_t' is defined as a 32-bit
+              ;; integer in 'hurd_types.defs', so this Gnulib test always fails.
+              ;; Use a phase instead of XFAIL_TESTS to not override
+              ;; xfailing tests in grep
+              #$@(if (target-hurd32?)
+                     #~((add-after 'unpack 'skip-year2038-test
+                          (lambda _
+                            (substitute* "gnulib-tests/test-year2038.c"
+                              (("(^| )main *\\(.*" all)
+                               (string-append all "{\n  return 77;//"))))))
+                     #~())
              #$@(if (system-hurd?)
                     #~((add-before 'check 'skip-test
                          (lambda _
@@ -269,8 +272,7 @@ implementation offers several extensions over the standard utility.")
           '(#:make-flags (list "TESTSUITEFLAGS= -k '!tricky time stamps'")))
          (else '()))
      ;; XXX: 32-bit Hurd platforms don't support 64bit time_t
-      ,@(if (and (target-hurd?)
-                 (not (target-64bit?)))
+      ,@(if (target-hurd32?)
            (list #:configure-flags ''("--disable-year2038"))
            '())
      #:phases (modify-phases %standard-phases
@@ -346,7 +348,7 @@ differences.")
    (arguments
     (substitute-keyword-arguments (package-arguments patch/pinned)
       ((#:configure-flags flags #~'())
-        (if (and (target-hurd?) (not (target-64bit?)))
+        (if (target-hurd32?)
            #~(cons* "--disable-year2038"
                     #$flags)
            flags))))
@@ -370,7 +372,7 @@ differences.")
     ;; integer in 'hurd_types.defs', so this Gnulib test always fails.
     #:make-flags
     #~#$(cond ((and (not (%current-target-system))
-                     (string=? (%current-system) "i586-gnu"))
+                     (target-hurd32?))
                #~'("XFAIL_TESTS=test-year2038"))
               ;; TODO: Figure out why these gnulib tests are failing.
               ((and (not (%current-target-system))
@@ -428,8 +430,7 @@ interactive means to merge two files.")
   (arguments
    `(#:configure-flags (list
                         ;; XXX: 32-bit Hurd platforms don't support 64bit time_t
-                         ,@(if (and (target-hurd?)
-                                    (not (target-64bit?)))
+                         ,@(if (target-hurd32?)
                               '("--disable-year2038")
                               '())
                         ;; Tell 'updatedb' to write to /var.
@@ -527,6 +528,7 @@ used to apply commands with arbitrarily long arguments.")
                                   ;; These tests error
                                   "tests/dd/nocache.sh"
                                   ;; These tests fail
+                                   "tests/cp/parent-perm-race.sh"
                                   "tests/cp/sparse.sh"
                                   "tests/cp/special-f.sh"
                                   "tests/dd/bytes.sh"
@@ -693,62 +695,75 @@ change.  GNU make offers many powerful extensions over the standard utility.")

 (define-public binutils
  (package
-   (name "binutils")
-   (version "2.44")
-   (source
-    (origin
-      (method url-fetch)
-      (uri (string-append "mirror://gnu/binutils/binutils-"
-                          version ".tar.bz2"))
-      (sha256
-       (base32 "0fnwaasfglbphqzvz5n25js9gl695p7pjbmb1z81g8gsc6k90qzn"))
-      (patches (search-patches
-                "binutils-2.41-fix-cross.patch"
-                "binutils-loongson-workaround.patch"))))
-   (build-system gnu-build-system)
-   (arguments
-    (list #:out-of-source? #t ;recommended in the README
-          #:configure-flags #~'(;; Add `-static-libgcc' to not retain a dependency
-                                ;; on GCC when bootstrapping.
-                                "LDFLAGS=-static-libgcc"
+    (name "binutils")
+    (version "2.44")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (string-append "mirror://gnu/binutils/binutils-"
+                           version ".tar.bz2"))
+       (sha256
+        (base32 "0fnwaasfglbphqzvz5n25js9gl695p7pjbmb1z81g8gsc6k90qzn"))
+       (patches (search-patches
+                 "binutils-2.41-fix-cross.patch"
+                 "binutils-loongson-workaround.patch"))))
+    (build-system gnu-build-system)
+    (arguments
+     (list #:out-of-source? #t          ;recommended in the README
+           #:configure-flags
+           #~'( ;; Add `-static-libgcc' to not retain a dependency
+               ;; on GCC when bootstrapping.
+               "LDFLAGS=-static-libgcc"

-                                ;; Turn on --enable-new-dtags by default to make the
-                                ;; linker set RUNPATH instead of RPATH on binaries.
-                                ;; This is important because RUNPATH can be overriden
-                                ;; using LD_LIBRARY_PATH at runtime.
-                                "--enable-new-dtags"
+               ;; Turn on --enable-new-dtags by default to make the
+               ;; linker set RUNPATH instead of RPATH on binaries.
+               ;; This is important because RUNPATH can be overriden
+               ;; using LD_LIBRARY_PATH at runtime.
+               "--enable-new-dtags"

-                                ;; Don't search under /usr/lib & co.
-                                "--with-lib-path=/no-ld-lib-path"
+               ;; Don't search under /usr/lib & co.
+               "--with-lib-path=/no-ld-lib-path"

-                                ;; Install BFD.  It ends up in a hidden directory,
-                                ;; but it's here.
-                                "--enable-install-libbfd"
+               ;; Install BFD.  It ends up in a hidden directory,
+               ;; but it's here.
+               "--enable-install-libbfd"

-                                ;; Make sure 'ar' and 'ranlib' produce archives in a
-                                ;; deterministic fashion.
-                                "--enable-deterministic-archives"
+               ;; Make sure 'ar' and 'ranlib' produce archives in a
+               ;; deterministic fashion.
+               "--enable-deterministic-archives"

-                                "--enable-64-bit-bfd"
-                                "--enable-compressed-debug-sections=all"
-                                "--enable-lto"
-                                "--enable-separate-code"
-                                "--enable-threads")
+               "--enable-64-bit-bfd"
+               ;; Note: Do not enable compression here, as dwz cannot process
+               ;; compressed debug sections.
+               "--enable-lto"
+               "--enable-separate-code"
+               "--enable-threads")
+           #:phases
+           #~(modify-phases %standard-phases
+               (add-after 'unpack 'use-zstd-compression-level-19
+                 (lambda _
+                   ;; The default level (3) is hard-coded.  Use a higher level to
+                   ;; compact debug sections as much as possible.
+                   (substitute* "bfd/compress.c"
+                     (("ZSTD_CLEVEL_DEFAULT") "19")))))

-          ;; For some reason, the build machinery insists on rebuilding .info
-          ;; files, even though they're already provided by the tarball.
-          #:make-flags #~'("MAKEINFO=true")))
-   (native-inputs (list bison))                   ;needed to build 'gprofng'
-   (synopsis "Binary utilities: bfd gas gprof ld")
-   (description
-    "GNU Binutils is a collection of tools for working with binary files.
+           ;; For some reason, the build machinery insists on rebuilding .info
+           ;; files, even though they're already provided by the tarball.
+           #:make-flags #~'("MAKEINFO=true")))
+    (native-inputs
+     (list bison                        ;needed to build 'gprofng'
+           pkg-config))
+    (inputs (list `(,zstd "lib")))
+    (synopsis "Binary utilities: bfd gas gprof ld")
+    (description
+     "GNU Binutils is a collection of tools for working with binary files.
 Perhaps the most notable are \"ld\", a linker, and \"as\", an assembler.
 Other tools include programs to display binary profiling information, list
 the strings in a binary file, and utilities for working with archives.  The
 \"bfd\" library for working with executable and object formats is also
 included.")
-   (license gpl3+)
-   (home-page "https://www.gnu.org/software/binutils/")))
+    (license gpl3+)
+    (home-page "https://www.gnu.org/software/binutils/")))

 ;; FIXME: ath9k-firmware-htc-binutils.patch do not apply on 2.34 because of a
 ;; big refactoring of xtensa-modules.c (commit 567607c11fbf7105 upstream).
@@ -790,10 +805,22 @@ included.")
                 (delete "LDFLAGS=-static-libgcc" #$flags)))
       ((#:phases phases '%standard-phases)
        #~(modify-phases #$phases
+            (add-after 'unpack 'use-zstd-compression-level-19-for-gold
+              (lambda _
+                ;; The default level (3) is hard-coded.  Use a higher level to
+                ;; compact debug sections as much as possible.
+                (substitute* "gold/compressed_output.cc"
+                  (("ZSTD_CLEVEL_DEFAULT") "19"))))
           (add-after 'patch-source-shebangs 'patch-more-shebangs
             (lambda _
               (substitute* "gold/Makefile.in"
                 (("/bin/sh") (which "sh")))))
+           (add-before 'check 'set-LD_LIBRARY_PATH
+             (lambda* (#:key inputs #:allow-other-keys)
+               ;; Some test binaries are linked with gold, which lack RUNPATH
+               ;; info due to not being linked with our ld-wrapper script.
+               (setenv "LD_LIBRARY_PATH"
+                       (dirname (search-input-file inputs "lib/libzstd.so")))))
           ;; Multiple failing tests on some architectures in the gold testsuite.
           #$@(if (or (target-arm?)
                      (target-ppc32?))
@@ -1354,145 +1381,6 @@ with the Linux kernel.")
           ;; This phase fails trying to create /etc/ld.so.cache
           (delete 'install-utf8-c-locale)))))))

-(define-public glibc-2.32
-  (package
-    (inherit glibc-2.35)
-    (version "2.32")
-    (source (origin
-              (inherit (package-source glibc))
-              (uri (string-append "mirror://gnu/glibc/glibc-" version ".tar.xz"))
-              (sha256
-               (base32
-                "0di848ibffrnwq7g2dvgqrnn4xqhj3h96csn69q4da51ymafl9qn"))
-              (patches (search-patches
-                        "glibc-skip-c++.patch"
-                        "glibc-ldd-powerpc.patch"
-                        "glibc-ldd-x86_64.patch"
-                        "glibc-dl-cache.patch"
-                        "glibc-hidden-visibility-ldconfig.patch"
-                        "glibc-versioned-locpath.patch"
-                        "glibc-allow-kernel-2.6.32.patch"
-                        "glibc-reinstate-prlimit64-fallback.patch"
-                        "glibc-supported-locales.patch"
-                        "glibc-hurd-clock_t_centiseconds.patch"
-                        "glibc-2.31-hurd-clock_gettime_monotonic.patch"
-                        "glibc-hurd-signal-sa-siginfo.patch"
-                        "glibc-hurd-mach-print.patch"
-                        "glibc-hurd-gettyent.patch"))
-              #;
-              (patches (search-patches "glibc-ldd-x86_64.patch"
-                                       "glibc-hidden-visibility-ldconfig.patch"
-                                       "glibc-versioned-locpath.patch"
-                                       "glibc-allow-kernel-2.6.32.patch"
-                                       "glibc-reinstate-prlimit64-fallback.patch"
-                                       "glibc-supported-locales.patch"
-                                       "glibc-hurd-clock_t_centiseconds.patch"
-                                       "glibc-hurd-clock_gettime_monotonic.patch"
-                                       "glibc-hurd-signal-sa-siginfo.patch"))))
-
-    (arguments
-     (substitute-keyword-arguments (package-arguments glibc)
-       ((#:make-flags flags '())
-        ;; Arrange so that /etc/rpc & co. go to $out/etc.
-        `(list (string-append "sysconfdir="
-                              (assoc-ref %outputs "out")
-                              "/etc")))
-       ((#:phases phases)
-        `(modify-phases ,phases
-           (add-before 'configure 'set-etc-rpc-installation-directory
-             (lambda* (#:key outputs #:allow-other-keys)
-               ;; Install the rpc data base file under `$out/etc/rpc'.
-               (let ((out (assoc-ref outputs "out")))
-                 (substitute* "sunrpc/Makefile"
-                   (("^\\$\\(inst_sysconfdir\\)/rpc(.*)$" _ suffix)
-                    (string-append out "/etc/rpc" suffix "\n"))
-                   (("^install-others =.*$")
-                    (string-append "install-others = " out "/etc/rpc\n"))))))))))))
-
-(define-public glibc-2.31
-  (package
-    (inherit glibc-2.35)
-    (version "2.31")
-    (source (origin
-              (inherit (package-source glibc))
-              (uri (string-append "mirror://gnu/glibc/glibc-" version ".tar.xz"))
-              (sha256
-               (base32
-                "05zxkyz9bv3j9h0xyid1rhvh3klhsmrpkf3bcs6frvlgyr2gwilj"))
-              (patches (search-patches
-                        "glibc-skip-c++.patch"
-                        "glibc-ldd-powerpc.patch"
-                        "glibc-ldd-x86_64.patch"
-                        "glibc-dl-cache.patch"
-                        "glibc-hidden-visibility-ldconfig.patch"
-                        "glibc-versioned-locpath.patch"
-                        "glibc-allow-kernel-2.6.32.patch"
-                        "glibc-reinstate-prlimit64-fallback.patch"
-                        "glibc-supported-locales.patch"
-                        "glibc-hurd-clock_t_centiseconds.patch"
-                        "glibc-2.31-hurd-clock_gettime_monotonic.patch"
-                        "glibc-hurd-signal-sa-siginfo.patch"
-                        "glibc-hurd-mach-print.patch"
-                        "glibc-hurd-gettyent.patch"))))
-    (arguments
-     (substitute-keyword-arguments (package-arguments glibc)
-       ((#:phases phases)
-        `(modify-phases ,phases
-           (add-before 'configure 'set-etc-rpc-installation-directory
-             (lambda* (#:key outputs #:allow-other-keys)
-               ;; Install the rpc data base file under `$out/etc/rpc'.
-               (let ((out (assoc-ref outputs "out")))
-                 (substitute* "sunrpc/Makefile"
-                   (("^\\$\\(inst_sysconfdir\\)/rpc(.*)$" _ suffix)
-                    (string-append out "/etc/rpc" suffix "\n"))
-                   (("^install-others =.*$")
-                    (string-append "install-others = " out "/etc/rpc\n"))))))))))))
-
-(define-public glibc-2.30
-  (package
-    (inherit glibc-2.31)
-    (version "2.30")
-    (native-inputs
-     ;; This fails with a build error in libc-tls.c when using GCC 10.  Use an
-     ;; older compiler.
-     (modify-inputs (package-native-inputs glibc)
-       (prepend gcc-8)))
-    (source (origin
-              (inherit (package-source glibc))
-              (uri (string-append "mirror://gnu/glibc/glibc-" version ".tar.xz"))
-              (sha256
-               (base32
-                "1bxqpg91d02qnaz837a5kamm0f43pr1il4r9pknygywsar713i72"))
-              (patches (search-patches "glibc-skip-c++.patch"
-                                       "glibc-ldd-x86_64.patch"
-                                       "glibc-CVE-2019-19126.patch"
-                                       "glibc-hidden-visibility-ldconfig.patch"
-                                       "glibc-versioned-locpath.patch"
-                                       "glibc-allow-kernel-2.6.32.patch"
-                                       "glibc-reinstate-prlimit64-fallback.patch"
-                                       "glibc-2.29-supported-locales.patch"))))))
-
-(define-public glibc-2.29
-  (package
-    (inherit glibc-2.30)
-    (version "2.29")
-    (source (origin
-              (inherit (package-source glibc))
-              (uri (string-append "mirror://gnu/glibc/glibc-" version ".tar.xz"))
-              (sha256
-               (base32
-                "0jzh58728flfh939a8k9pi1zdyalfzlxmwra7k0rzji5gvavivpk"))
-              (patches (search-patches "glibc-skip-c++.patch"
-                                       "glibc-ldd-x86_64.patch"
-                                       "glibc-CVE-2019-7309.patch"
-                                       "glibc-CVE-2019-9169.patch"
-                                       "glibc-2.29-git-updates.patch"
-                                       "glibc-hidden-visibility-ldconfig.patch"
-                                       "glibc-versioned-locpath.patch"
-                                       "glibc-allow-kernel-2.6.32.patch"
-                                       "glibc-reinstate-prlimit64-fallback.patch"
-                                       "glibc-2.29-supported-locales.patch"))))))
-
 (define-public (make-gcc-libc base-gcc libc)
  "Return a GCC that targets LIBC."
  (package (inherit base-gcc)
@@ -1513,14 +1401,7 @@ with the Linux kernel.")
    (inherit glibc)
    (name "glibc-locales")
    (source (origin (inherit (package-source glibc))
-                    ;; The patch for glibc 2.28 and earlier replaces the same
-                    ;; content, but the context in the patch is different
-                    ;; enough to fail to merge.
-                    (patches (cons (search-patch
-                                    (if (version>=? (package-version glibc)
-                                                    "2.29")
-                                        "glibc-locales.patch"
-                                        "glibc-locales-2.28.patch"))
+                    (patches (cons (search-patch "glibc-locales.patch")
                                   (origin-patches (package-source glibc))))))
    (synopsis "All the locales supported by the GNU C Library")
    (description
@@ -1674,21 +1555,6 @@ test environments.")
 (define-public glibc-locales-2.33
  (package (inherit (make-glibc-locales glibc-2.33))
           (name "glibc-locales-2.33")))
-(define-public glibc-locales-2.32
-  (package (inherit (make-glibc-locales glibc-2.32))
-           (name "glibc-locales-2.32")))
-(define-public glibc-locales-2.31
-  (package (inherit (make-glibc-locales glibc-2.31))
-           (name "glibc-locales-2.31")))
-(define-public glibc-locales-2.30
-  (package (inherit (make-glibc-locales glibc-2.30))
-           (name "glibc-locales-2.30")))
-(define-public glibc-locales-2.29
-  (package (inherit (make-glibc-locales glibc-2.29))
-           (name "glibc-locales-2.29")))
-(define-public glibc-utf8-locales-2.29
-  (package (inherit (make-glibc-utf8-locales glibc-2.29))
-           (name "glibc-utf8-locales-2.29")))

 (define-public which
  (package
@@ -1710,7 +1576,18 @@ variety of options.  It is an alternative to the shell \"type\" built-in
 command.")
    (license gpl3+))) ; some files are under GPLv2+

-(define-public glibc/hurd glibc)
+(define-public glibc/hurd
+  (hidden-package
+   (package/inherit glibc
+     (source
+      (origin
+        (inherit (package-source glibc))
+        (patches
+         (append (map search-patch
+                      (delete "glibc-hurd64-intr-msg-clobber.patch" %glibc-patches))
+                 (search-patches
+		  "glibc-hurd-signal-fpe-exception.patch"
+		  "glibc-hurd-xstate.patch"))))))))

 (define-public glibc/hurd-headers
  (package/inherit glibc/hurd
@@ -1789,15 +1666,15 @@ command.")
    (name "tzdata")
    ;; This package should be kept in sync with python-pytz and python-tzdata
    ;; in (gnu packages time).
-    (version "2025a")
+    (version "2025b")
    (source (origin
-             (method url-fetch)
-             (uri (string-append
-                   "https://data.iana.org/time-zones/releases/tzdata"
-                   version ".tar.gz"))
-             (sha256
-              (base32
-               "1l7hnlgc4wgy2gmaj5zmswpzbyq23h7vsndnw2zhwibw5k3wnpsd"))))
+              (method url-fetch)
+              (uri (string-append
+                    "https://data.iana.org/time-zones/releases/tzdata"
+                    version ".tar.gz"))
+              (sha256
+               (base32
+                "0x0lswl5v3q3ml8ig4djc76p9zc593xajzp22x881isz6h9h908i"))))
    (build-system gnu-build-system)
    (arguments
     (list #:tests? #f
@@ -1856,7 +1733,9 @@ command.")
                     (copy-recursively (string-append out "/share/zoneinfo-leaps")
                                       (string-append out "/share/zoneinfo/right"))
                     (delete-file-recursively
-                      (string-append out "/share/zoneinfo-leaps")))))
+                      (string-append out "/share/zoneinfo-leaps"))
+                     (install-file "leap-seconds.list"
+                                   (string-append out "/share/zoneinfo")))))
               (delete 'configure))))
    (inputs (list (origin
                    (method url-fetch)
@@ -1865,7 +1744,7 @@ command.")
                          version ".tar.gz"))
                    (sha256
                     (base32
-                      "0qahpwp1zlyvi7qrlm4r74pmj3c7sx3jlg9xw2siwj3nkzapk5hi")))))
+                      "1v1mw6599afdcmf5dal7zvjbl3caibkzmlw7kka71vi56pdzxy05")))))
    (home-page "https://www.iana.org/time-zones")
    (synopsis "Database of current and historical time zones")
    (description "The Time Zone Database (often called tz or zoneinfo)
@@ -1885,20 +1764,6 @@ and daylight-saving rules.")
 ;;; package.
 (define-public tzdata-for-tests tzdata)

-;;; TODO: Move the 'install-leap-seconds' phase into the main package's
-;;; 'post-install' phase on the next rebuild cycle.
-(define-public tzdata/leap-seconds
-  (hidden-package
-    (package/inherit tzdata
-      (arguments
-        (substitute-keyword-arguments (package-arguments tzdata)
-          ((#:phases phases)
-           #~(modify-phases #$phases
-               (add-after 'post-install 'install-leap-seconds
-                 (lambda _
-                   (install-file "leap-seconds.list"
-                     (string-append #$output "/share/zoneinfo")))))))))))
-
 (define-public libiconv
  (package
    (name "libiconv")
@@ -66,7 +66,7 @@

 (define (patch-url seqno)
  "Return the URL of Bash patch number SEQNO."
-  (format #f "mirror://gnu/bash/bash-5.2-patches/bash52-~3,'0d" seqno))
+  (format #f "mirror://gnu/bash/bash-5.3-patches/bash53-~3,'0d" seqno))

 (define (bash-patch seqno sha256-bv)
  "Return the origin of Bash patch SEQNO, with expected hash SHA256-BV."
@@ -79,47 +79,13 @@
  (list (bash-patch seqno (base32 hash))
        ...))

-(define %patch-series-5.2
-  ;; This is the current patches series for 5.2, generated using
+(define %patch-series-5.3
+  ;; This is the current patches series for 5.3, generated using
  ;; 'download-patches' below.
  (patch-series
-   (1 "02iibpd3jq8p1bhdzgik8ps6gi1145vr463a82gj1hivjbp2ybzl")
-   (2 "1f6p1z85qh1lavdp3xikgp0bfv0vqhvgpgwmdzlywl35hwdmxk25")
-   (3 "1zxsi869jd90hksx3nyypgyqwrxhw2ws3r6hmk76yc1lsgdhq2ba")
-   (4 "04i5liw5cg6dqkdxfgazqc2jrw40bmclx3dx45bwy259pcj7g0iq")
-   (5 "0mykflv9qnbx3jz71l4f7isadiw9knm4qimqkwsv9cv88dafpq7c")
-   (6 "13265akl8w6zyrg0l7f0x6arjgqjhllcwl6lk46rl53x4mm5dq6i")
-   (7 "146lrwkn5wgxzs6vx34wl47g69zsxdy032k40qzi626b47ya6015")
-   (8 "1s5i8hcayrv25lc8fxcr431v634yx5sii53b8fmip789s0pxjjvb")
-   (9 "1kfk25151ka9wkmk1myf12irgcmvhsd8b0nfifvhrszah9w82npr")
-   (10 "1kf1jrwm30js0v3d1r2rk4x09s1pyjp70wnd1qqhf9bmkw15ww67")
-   (11 "1x5nkvbj6hci7gx42q7qa72hg2a9wwxh85dk79gn521ypwjmy6w3")
-   (12 "0b6lcwzm7v5bzjiwaz2c8n5aj77w8ckhp2vwk4v3zsdq3z70gc9g")
-   (13 "1rkwpibd6j2ghppfhqsva2jm4kdni6b7jpdsxdps52643gc4yjq9")
-   (14 "09766vqqw4ffnmysm725v35qkhp1g9j4qgqag941xvq655pj9y9y")
-   (15 "12im449abnq5gaqjmdxr5i38kmp02fa8l8wffad3jryvd58r0wzg")
-   (16 "05arb0hzmng03cr357lf6p8af0x2a1pznsd3psll03nibfy56n0m")
-   (17 "129cvx4gfz8n23iw1lhbknbw86fyw6vh60jqj1wj3d5pr75wwj0w")
-   (18 "105am94qxjc27gga4a8asvsi01090xwjfim3s16lafwjvm4xsha6")
-   (19 "10njgv5mrc5rhsp5lvxcbm0pnzn59a8spi2nhdasifyl1a32cp1j")
-   (20 "07f0wlmqjdfarp44w3gj9gdqbqm5x20rvlhpn34ngklmxcm2bz5n")
-   (21 "1kahfqqalcwi4m73pg3ssz6lh0kcqsqax09myac7a15d2y0vhd43")
-   (22 "0w74aym0g1fh48864a3qxh89f26iaq7wsbg7244c6kjr94527dbq")
-   (23 "1lywjqbc36j5pdzfcvnz1zy30j76aqmsm190p888av0hw815b45g")
-   (24 "1hq23djqbr7s9y2324jq9mxr5bwdkmgizn3zgpchbsqp054k85cp")
-   (25 "0x9hc4silzl4d3zw4p43i5dm7w86k50j47f87lracwfgwy3z8f2i")
-   (26 "1b1fhm1dsi67r8ip17s0xvx2qq31fsxc1g9n3r931dd0k9a1zvln")
-   (27 "0fdbhvs9dkf4knncifh98a76q4gylhyvfrffq5p9q3ag5q58jap1")
-   (28 "1hdacd6sssjshmry1sscdnxxfb2r51bvdyghlfjaqgc9l85phhk0")
-   (29 "11wrlb20w6v89b96krg0gwxipwhvrda6rq1y9f972m32gsrsqp0j")
-   (30 "13v9fqgim082dmvkslsr0hs793yzhsij2s91mjswsfhj1qip7zy3")
-   (31 "15d7rddj6spwc1fy997lxx6zvzq0zbxgf2h20mhi4wgp5nzbglf2")
-   (32 "05ia6yf32hjprmyyxqawhgckxs3684ikfx8xg08zfgx9xkd7g73v")
-   (33 "1qm2aad9mf2xah6xwchga7s5pk3v308mrv9lgh50d65d236ccgh1")
-   (34 "0bi38dhkkwpm2qrzp8zpykglq6gibvv2n9f8m59gwj406cxvp7w9")
-   (35 "1r8k34y82v02yfkgws17j7i53ybb74dqnwl2jjiv0av9z93hl6l2")
-   (36 "0mwhr9hfbh2czf8klbxg6nbd2g9xl9kygvgk061vird56r4kzj8m")
-   (37 "156sbi3srzkyxajkmhb7iigq0j4nvwnpsbw88xdsxn95a4xiqb4a")))
+   (1 "0zr8wgg1gb67vxn7ws971n1znrdinczymc688ndnpy2a6qs88q0z")
+   (2 "009051z55plsy4jmmjdb3ys7li2jraynz99qg7n6a1qk025591g3")
+   (3 "1vb0gnrkmz49rcfpxjcxy0v0k5278wrlkljk9gc20nizvk3xjigj")))

 (define (download-patches store count)
  "Download COUNT Bash patches into store.  Return a list of
@@ -157,7 +123,7 @@ number/base32-hash tuples, directly usable in the 'patch-series' form."
               " -Wl,-rpath -Wl,"
               (assoc-ref %build-inputs "ncurses")
               "/lib")))
-         (version "5.2"))
+         (version "5.3"))
    (package
     (name "bash")
     (source (origin
@@ -166,11 +132,11 @@ number/base32-hash tuples, directly usable in the 'patch-series' form."
                    "mirror://gnu/bash/bash-" version ".tar.gz"))
              (sha256
               (base32
-                "1yrjmf0mqg2q8pqphjlark0mcmgf88b0acq7bqf4gx3zvxkc2fd1"))
+                "1fii1xaxbng9x0klxmxkm0xhmycngfz72jsgyrna4sgqcmlxhp0d"))
              (patch-flags '("-p0"))
              (patches (cons (search-patch "bash-linux-pgrp-pipe.patch")
-                             %patch-series-5.2))))
-     (version (string-append version "." (number->string (length %patch-series-5.2))))
+                             %patch-series-5.3))))
+     (version (string-append version "." (number->string (length %patch-series-5.3))))
     (build-system gnu-build-system)

      (outputs '("out"
@@ -13,6 +13,7 @@
 ;;; Copyright © 2021 Arun Isaac <arunisaac@systemreboot.net>
 ;;; Copyright © 2022 Tomasz Jeneralczyk <tj@schwi.pl>
 ;;; Copyright © 2024 Nicolas Graves <ngraves@ngraves.fr>
+;;; Copyright © 2025 Artyom V. Poptsov <poptsov.artyom@gmail.com>
 ;;;
 ;;; This file is part of GNU Guix.
 ;;;
@@ -47,6 +48,7 @@
  #:use-module (gnu packages base)
  #:use-module (gnu packages bash)
  #:use-module (gnu packages c)
+  #:use-module (gnu packages gcc)
  #:use-module (gnu packages nss)
  #:use-module (gnu packages check)
  #:use-module (gnu packages compression)
@@ -264,17 +266,17 @@ tests.")
 (define-public bonnie++
  (package
    (name "bonnie++")
-    (version "1.98")
+    (version "2.00a")
    (source (origin
              (method url-fetch)
              (uri (string-append "https://www.coker.com.au/bonnie++/bonnie++-"
                                  version ".tgz"))
              (sha256
               (base32
-                "010bmlmi0nrlp3aq7p624sfaj5a65lswnyyxk3cnz1bqig0cn2vf"))))
+                "03lg8rz2a9wgwn9axd6gkjiswgxmp62fbxjvrrcvazmwh6ykplx8"))))
    (build-system gnu-build-system)
    (native-inputs
-     (list perl))
+     (list gcc-10 perl))
    (arguments '(#:tests? #f)) ; there are no tests
    (home-page "https://doc.coker.com.au/projects/bonnie/")
    (synopsis "Hard drive and file system benchmark suite")
@@ -902,3 +904,31 @@ user-provided Lua scripts.
 aspects of Vulkan performance.  The way in which each scene is rendered is
 configurable through a set of options.")
      (license license:lgpl2.1+))))
+
+(define-public osu-micro-benchmarks
+  (package
+    (name "osu-micro-benchmarks")
+    (version "7.5.1")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (string-append
+             "https://mvapich.cse.ohio-state.edu/download/mvapich/" name "-"
+             version ".tar.gz"))
+       (sha256
+        (base32 "08ifql3q8kv22xncvp6asfqp62dvfnc7w96b1r925c1w7ig0s38n"))))
+    (build-system gnu-build-system)
+    (inputs (list openmpi))
+    (arguments
+     (list
+      #:configure-flags
+      #~(list (string-append
+               "CC=" #$(this-package-input "openmpi") "/bin/mpicc")
+              (string-append
+               "CXX=" #$(this-package-input "openmpi") "/bin/mpicxx"))))
+    (home-page "https://mvapich.cse.ohio-state.edu/benchmarks/")
+    (synopsis "Benchmarking suite from the MVAPICH project")
+    (description
+     "Microbenchmarks suite to evaluate MPI and PGAS (OpenSHMEM, UPC, and
+UPC++) libraries for CPUs and GPUs.")
+    (license license:bsd-3)))
@@ -5,7 +5,7 @@
 ;;; Copyright © 2016 Ben Woodcroft <donttrustben@gmail.com>
 ;;; Copyright © 2017, 2022, 2024 Efraim Flashner <efraim@flashner.co.il>
 ;;; Copyright © 2017, 2018, 2019, 2020, 2021 Tobias Geerinckx-Rice <me@tobias.gr>
-;;; Copyright © 2019, 2020, 2021, 2022, 2023 Simon Tournier <zimon.toutoune@gmail.com>
+;;; Copyright © 2019-2023, 2025 Simon Tournier <zimon.toutoune@gmail.com>
 ;;; Copyright © 2020 Peter Lo <peterloleungyau@gmail.com>
 ;;; Copyright © 2020-2023 Mădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de>
 ;;; Copyright © 2020 Jakub Kądziołka <kuba@kadziolka.net>
@@ -4992,6 +4992,23 @@ create an alternative mapping from sequences.")
               (base32
                "0zx0brvcyi9id7xli9h5nk9an7j46p7zgjj3qmwr3jm4b95qahpl"))))
    (build-system r-build-system)
+    (arguments
+     (list
+      #:phases
+      #~(modify-phases %standard-phases
+          (add-before 'install 'fix-r-4.5.0
+            ;; Changes in R 4.5.0: C-Level Facilities.
+            ;; Strict R headers are now the default. This removes the legacy
+            ;; definitions of PI, Calloc, Realloc and Free: use M_PI,
+            ;; R_Calloc, R_Realloc or R_Free instead.
+            ;; https://cran.r-project.org/doc/manuals/r-release/NEWS.html
+            (lambda _
+              (substitute* '("src/densities.cpp"
+                             "src/loghmm.cpp"
+                             "src/scalehmm.cpp"
+                             "src/utility.cpp")
+                (("Calloc\\(") "R_Calloc(")
+                (("Free\\(") "R_Free(")))))))
    (native-inputs
     (list r-bsgenome-hsapiens-ucsc-hg19 r-knitr r-testthat))
    (propagated-inputs
@@ -10190,6 +10207,22 @@ at @url{https://github.com/kharchenkolab/hahmmr/}.")
                "1jm0ia06ls1m7dsbzp1hk68qi5wbqzhcf6x66534bj1kxdll17k7"))))
    (properties `((upstream-name . "Harshlight")))
    (build-system r-build-system)
+    (arguments
+     (list
+      #:phases
+      #~(modify-phases %standard-phases
+          (add-before 'install 'relax-c-standard
+            (lambda _
+              ;; XXX FIXME: $HOME/.R/Makevars seems to be the only way to
+              ;; set custom CFLAGS for R?
+              (setenv "HOME" (getcwd))
+              (mkdir-p ".R")
+              (with-directory-excursion ".R"
+                (with-output-to-file "Makevars"
+                  (lambda _
+                    (display (string-append
+                              "CFLAGS=-g -O2"
+                              " -std=gnu11"))))))))))
    (propagated-inputs
     (list r-affy
           r-altcdfenvs
@@ -11624,6 +11657,13 @@ containers.")
      '(modify-phases %standard-phases
         (add-after 'unpack 'set-HOME
           (lambda _ (setenv "HOME" "/tmp")))
+         ;; For unknown reasons, the libxml2 features are misreported without
+         ;; this call prior to running BiocGenerics:::testPackage("mzR").
+         (add-after 'unpack 'ensure-libxml2-works
+           (lambda _
+             (substitute* "tests/testthat.R"
+               (("library\\(\"MSnbase\"\\)" m)
+                (string-append "XML::libxmlFeatures()\n" m)))))
         (add-after 'unpack 'delete-bad-tests
           (lambda _
             ;; Needs r-prolocdata
@@ -11805,6 +11845,13 @@ specific parser.")
    (arguments
     `(#:phases
       (modify-phases %standard-phases
+         ;; For unknown reasons, the libxml2 features are misreported without
+         ;; this call prior to running BiocGenerics:::testPackage("mzR").
+         (add-after 'unpack 'ensure-libxml2-works
+           (lambda _
+             (substitute* "tests/runTests.R"
+               (("library\\(\"mzR\"\\)" m)
+                (string-append "XML::libxmlFeatures()\n" m)))))
         (add-after 'unpack 'use-system-boost
           (lambda _
             (substitute* "src/Makevars"
@@ -15391,7 +15438,10 @@ posterior for individual coefficients.")
          r-rsamtools
          r-rtracklayer
          r-summarizedexperiment))
-   (native-inputs (list r-biocgenerics r-bsgenome-hsapiens-ucsc-hg19 r-runit))
+   (native-inputs (list r-biocgenerics
+                        r-biocstyle
+                        r-bsgenome-hsapiens-ucsc-hg19
+                        r-runit))
   (home-page "https://bioconductor.org/packages/GreyListChIP")
   (synopsis "Greylist artefact regions based on ChIP inputs")
   (description "This package identifies regions of ChIP experiments with high
@@ -17400,7 +17450,7 @@ to install interface to SYMPHONY.")
    (propagated-inputs
     (list r-biocgenerics r-fdrtool r-lpsymphony r-slam))
    (native-inputs
-     (list r-knitr r-testthat))
+     (list r-knitr r-ggplot2 r-testthat r-scales))
    (home-page "https://bioconductor.org/packages/IHW")
    (synopsis "Independent hypothesis weighting")
    (description
@@ -19922,7 +19972,9 @@ footprints.")
           r-rcpp
           r-vioplot))
    (native-inputs
-     (list r-knitr r-testthat))
+     (list r-knitr
+           r-homo-sapiens
+           r-testthat))
    (home-page "https://bioconductor.org/packages/GOfuncR/")
    (synopsis "Gene ontology enrichment using FUNC")
    (description
@@ -20347,6 +20399,22 @@ gene-specific binding is expected.")
        (base32
         "04a11dsqd5y4b39nny94acnh0qhdazjc6d1803izza4vrgmw2csb"))))
    (build-system r-build-system)
+    (arguments
+     (list
+      #:phases
+      #~(modify-phases %standard-phases
+          (add-before 'install 'relax-gcc-14-strictness
+            (lambda _
+              ;; XXX FIXME: $HOME/.R/Makevars seems to be the only way to
+              ;; set custom CFLAGS for R?
+              (setenv "HOME" (getcwd))
+              (mkdir-p ".R")
+              (with-directory-excursion ".R"
+                (with-output-to-file "Makevars"
+                  (lambda _
+                    (display (string-append
+                              "CFLAGS=-g -O2"
+                              " -Wno-error=incompatible-pointer-types\n"))))))))))
    (propagated-inputs
     (list r-affy r-biobase r-biocgenerics r-gcrma r-genefilter))
    (home-page "https://bioconductor.org/packages/simpleaffy/")
@@ -20974,7 +21042,7 @@ Gaussian distributions.")
               (add-after 'unpack 'patch-sources
                 (lambda _
                   (setenv "POPCNT_CAPABILITY" "0")))))))
-    (inputs (list))
+    (inputs (list zlib))
    (native-inputs
     (list r-knitr r-testthat))
    (home-page "https://bioconductor.org/packages/Rbowtie/")
@@ -25477,7 +25545,19 @@ decompression of raw bead-level data from the Illumina BeadArray platform.")
             (delete-file "tests/testthat/test_Axt.R")
             (substitute* "tests/testthat/test_CNE.R"
               ((".*test_CNE.*" m)
-                (string-append m "skip('guix')\n"))))))))
+                (string-append m "skip('guix')\n")))))
+         (add-before 'install 'fix-gcc-14-strictness
+           (lambda _
+              ;; XXX FIXME: $HOME/.R/Makevars seems to be the only way to
+              ;; set custom CFLAGS for R?
+              (setenv "HOME" (getcwd))
+              (mkdir-p ".R")
+              (with-directory-excursion ".R"
+                (with-output-to-file "Makevars"
+                  (lambda _
+                    (display (string-append
+                              "CFLAGS=-g -O2"
+                              " -std=gnu11 \n"))))))))))
    (build-system r-build-system)
    (inputs (list zlib))
    (propagated-inputs
@@ -26934,6 +27014,23 @@ the earlier snpMatrix package, allowing for uncertainty in genotypes.")
         "071aipwk1awr71hvzflps49dzp83p12zm1pbyx4l8d2v3wbj0dlz"))))
    (properties `((upstream-name . "chromstaR")))
    (build-system r-build-system)
+    (arguments
+     (list
+      #:phases
+      #~(modify-phases %standard-phases
+          (add-before 'install 'fix-r-4.5.0
+            ;; Changes in R 4.5.0: C-Level Facilities.
+            ;; Strict R headers are now the default. This removes the legacy
+            ;; definitions of PI, Calloc, Realloc and Free: use M_PI,
+            ;; R_Calloc, R_Realloc or R_Free instead.
+            ;; https://cran.r-project.org/doc/manuals/r-release/NEWS.html
+            (lambda _
+              (substitute* '("src/densities.cpp"
+                             "src/scalehmm.cpp"
+                             "src/utility.cpp")
+                (("Calloc\\(") "R_Calloc(")
+                (("Free\\(") "R_Free(")
+                (("Realloc\\(") "R_Realloc(")))))))
    (propagated-inputs
     (list r-bamsignals
           r-biocgenerics
@@ -28177,6 +28274,16 @@ visualizing bisulfite sequencing data.")
                "0lxva0lvh3xcpkrjalkg2ps8jlzaypnsy3ibd9mk4lnjpbn5hiii"))))
    (properties `((upstream-name . "dada2")))
    (build-system r-build-system)
+    (arguments
+     (list
+      #:phases
+      #~(modify-phases %standard-phases
+          (add-before 'install 'relax-gcc-14-strictness
+            (lambda _
+              (substitute* "src/Makevars"
+                (("CXX_STD = CXX11")
+                 "CXX_STD = CXX11
+PKG_CXXFLAGS=-g -O2 -Wno-error=changes-meaning")))))))
    (propagated-inputs
     (list r-biocgenerics
           r-biostrings
@@ -23,6 +23,7 @@
 ;;; Copyright © 2025 Tomas Volf <~@wolfsden.cz>
 ;;; Copyright © 2025 Janneke Nieuwenhuizen <janneke@gnu.org>
 ;;; Copyright © 2025 Vinicius Monego <monego@posteo.net>
+;;; Copyright © 2025 Junker <dk@junkeria.club>
 ;;;
 ;;; This file is part of GNU Guix.
 ;;;
@@ -221,21 +222,62 @@ of the Transmission BitTorrent client, using its HTTP RPC protocol.")
    (home-page "https://github.com/transmission-remote-gtk/transmission-remote-gtk")
    (license l:gpl2+)))

+(define-public stig
+  (package
+    (name "stig")
+    (version "0.14.0a0")
+    (source
+     (origin
+       (method git-fetch)
+       (uri (git-reference
+              (url "https://github.com/rndusr/stig")
+              (commit (string-append "v" version))))
+       (file-name (git-file-name name version))
+       (sha256
+        (base32 "1jfcgncva94pyzjifar1l6wlmb7aylg0l4fxljc83rkbj1a2aan0"))))
+    (propagated-inputs
+     (list python-urwid
+           python-urwidtrees
+           python-aiohttp
+           python-aiohttp-socks
+           python-pyxdg
+           python-blinker
+           python-natsort
+           python-async-timeout
+           python-setproctitle))
+    (arguments
+     (list
+      #:tests? #f ;tests require network access
+      #:phases #~(modify-phases %standard-phases
+                   (add-after 'unpack 'loosen-version-restrictions
+                     (lambda _
+                       (substitute* "setup.py"
+                         (("urwidtrees==1.0.3") "urwidtrees>=1.0.3")))))))
+    (inputs (list python))
+    (build-system python-build-system)
+    (synopsis "TUI and CLI for the BitTorrent client Transmission")
+    (description
+     "Stig is a @acronym{TUI, Text User Interface} and @acronym{CLI, Command Line
+Interface} client for the BitTorrent client Transmission.")
+    (home-page "https://github.com/rndusr/stig")
+    (license l:gpl3)))
+
 (define-public libtorrent
  (package
    (name "libtorrent")
-    (version "0.13.8")
+    (version "0.16.1")
    (source (origin
-              (method url-fetch)
-              (uri (string-append
-                    "http://rtorrent.net/downloads/libtorrent-"
-                    version ".tar.gz"))
+              (method git-fetch)
+              (uri (git-reference
+                    (url "https://github.com/rakshasa/libtorrent/")
+                    (commit (string-append "v" version))))
+              (file-name (git-file-name name version))
              (sha256
               (base32
-                "10z9i1rc41cmmi7nx8k7k1agsx6afv09g9cl7g9zr35fyhl5l4gd"))))
+                "1rk5y27r2v3x2v1gngxfw8kj1i8n93dpkvda6idbid6yxvv9slkm"))))
    (build-system gnu-build-system)
-    (inputs (list openssl zlib))
-    (native-inputs (list pkg-config cppunit))
+    (inputs (list curl openssl zlib))
+    (native-inputs (list autoconf automake cppunit libtool pkg-config))
    (synopsis "BitTorrent library of rtorrent")
    (description
     "LibTorrent is a BitTorrent library used by and developed in parallel
@@ -247,15 +289,16 @@ speed and efficiency.")
 (define-public rtorrent
  (package
    (name "rtorrent")
-    (version "0.9.8")
+    (version "0.16.1")
    (source (origin
-              (method url-fetch)
-              (uri (string-append
-                    "http://rtorrent.net/downloads/rtorrent-"
-                    version ".tar.gz"))
+              (method git-fetch)
+              (uri (git-reference
+                    (url "https://github.com/rakshasa/rtorrent/")
+                    (commit (string-append "v" version))))
+              (file-name (git-file-name name version))
              (sha256
               (base32
-                "1bs2fnf4q7mlhkhzp3i1v052v9xn8qa7g845pk9ia8hlpw207pwy"))))
+                "0azpqclksczh1j7kpkwqh68xp3p9rayf9dym1c2iif56fm960mgh"))))
    (build-system gnu-build-system)
    (inputs (list libtorrent
                  ncurses
@@ -263,7 +306,7 @@ speed and efficiency.")
                  cyrus-sasl
                  openssl
                  zlib))
-    (native-inputs (list pkg-config cppunit))
+    (native-inputs (list autoconf automake cppunit libtool pkg-config))
    (synopsis "BitTorrent client with ncurses interface")
    (description
     "rTorrent is a BitTorrent client with an ncurses interface.  It supports
@@ -564,8 +607,8 @@ features.")
       (modify-inputs (package-inputs base)
         (delete "qtsvg"))))))

-(define-public qbittorrent-nox
-  (deprecated-package "qbittorrent-nox" qbittorrent-no-x))
+(define-deprecated-package qbittorrent-nox
+  qbittorrent-no-x)

 (define-public qbittorrent-enhanced
  (package
@@ -602,8 +645,8 @@ the following features:
    (arguments (package-arguments qbittorrent-no-x))
    (inputs (package-inputs qbittorrent-no-x))))

-(define-public qbittorrent-enhanced-nox
-  (deprecated-package "qbittorrent-enhanced-nox" qbittorrent-enhanced-no-x))
+(define-deprecated-package qbittorrent-enhanced-nox
+  qbittorrent-enhanced-no-x)

 (define-public deluge
  (package
@@ -1,7 +1,17 @@
 ;;; GNU Guix --- Functional package management for GNU
-;;; Copyright © 2023, 2024, 2025 Artyom V. Poptsov <poptsov.artyom@gmail.com>
+;;; Copyright © 2016 Jan Nieuwenhuizen <janneke@gnu.org>
+;;; Copyright © 2017 Clément Lassieur <clement@lassieur.org>
+;;; Copyright © 2017 Tobias Geerinckx-Rice <me@tobias.gr>
+;;; Copyright © 2018 Mark H Weaver <mhw@netris.org>
+;;; Copyright © 2020 Ludovic Courtès <ludo@gnu.org>
+;;; Copyright © 2020 Marius Bakke <marius@gnu.org>
+;;; Copyright © 2022 jgart <jgart@dismail.de>
 ;;; Copyright © 2023 Adam Faiz <adam.faiz@disroot.org>
+;;; Copyright © 2023 Maxim Cournoyer <maxim@guixotic.coop>
+;;; Copyright © 2023 宋文武 <iyzsong@envs.net>
+;;; Copyright © 2023-2025 Artyom V. Poptsov <poptsov.artyom@gmail.com>
 ;;; Copyright © 2025 Gabriel Santos <gabrielsantosdesouza@disroot.org>
+;;; Copyright © 2025 Sharlatan Hellseher <sharlatanus@gmail.com>
 ;;;
 ;;; This file is part of GNU Guix.
 ;;;
@@ -21,7 +31,9 @@
 (define-module (gnu packages books)
  #:use-module ((guix licenses) #:prefix license:)
  #:use-module (guix build-system cmake)
+  #:use-module (guix build-system copy)
  #:use-module (guix build-system gnu)
+  #:use-module (guix deprecation)
  #:use-module (guix download)
  #:use-module (guix gexp)
  #:use-module (guix git-download)
@@ -50,11 +62,105 @@
  #:use-module (gnu packages python)
  #:use-module (gnu packages python-xyz)
  #:use-module (gnu packages tex)
+  #:use-module (gnu packages texinfo)
  #:use-module (gnu packages texlive)
  #:use-module (gnu packages version-control)
  #:use-module (gnu packages webkit)
  #:use-module (gnu packages xml))

+(define-public book-faif
+  (package
+    (name "book-faif")
+    (version "2.0")
+    (source (origin
+              (method url-fetch)
+              (uri (string-append "https://www.fsf.org/faif/faif-" version
+                                  ".tar.bz2"))
+              (sha256
+               (base32
+                "0qf14d0n6k1dn9z0fdnx9qkhn4iq685xd443w7l7w54bm931p7dw"))))
+    (build-system copy-build-system)
+    (native-inputs
+     (list (texlive-local-tree
+            (list texlive-caption
+                  texlive-endnotes
+                  texlive-etoolbox
+                  texlive-fncychap
+                  texlive-helvetic
+                  texlive-times
+                  texlive-ucs))))
+    (arguments
+     (list
+      #:install-plan #~'(("faif-2.0.pdf" "share/doc/faif/"))
+      #:phases
+      #~(modify-phases %standard-phases
+          (add-after 'unpack 'writable-texmfvar
+            ;; Generating font shapes require a writable TEXMFVAR directory.
+            (lambda _ (setenv "TEXMFVAR" "/tmp")))
+          (add-before 'install 'build
+            (lambda _
+              (invoke "pdflatex" "faif-2.0.tex"))))))
+    (home-page "https://www.fsf.org/faif")
+    (synopsis "Free as in Freedom (2.0)")
+    (description
+     "In 2002, Sam Williams wrote Free as in Freedom, a biography of Richard
+M. Stallman.  In its epilogue, Williams expressed hope that choosing to
+distribute his book under the GNU Free Documentation License would enable and
+encourage others to share corrections and their own perspectives through
+modifications to his work.  Free as in Freedom (2.0) is Stallman's revision of
+the original biography.  While preserving Williams's viewpoint, it includes
+factual corrections and extensive new commentary by Stallman, as well as new
+prefaces by both authors written for the occasion.  It is a rare kind of
+biography, where the reader has the benefit of both the biographer's original
+words and the subject's response.")
+    (license license:fdl1.3+)))
+
+(define-public book-sicp
+  (let ((commit "bda03f79d6e2e8899ac2b5ca6a3732210e290a79")
+        (revision "3"))
+    (package
+      (name "book-sicp")
+      (version (git-version "20180718" revision commit))
+      (source (origin
+                (method git-fetch)
+                (uri (git-reference
+                      (url "https://github.com/sarabander/sicp")
+                      (commit commit)))
+                (sha256
+                 (base32
+                  "0mng7qrj2dvssyffr9ycnf4a5k0kadp4dslq7mc5bhzq1qxyjs2w"))
+                (file-name (git-file-name name version))))
+      (build-system copy-build-system)
+      (native-inputs (list gzip texinfo))
+      (arguments
+       (list #:install-plan ''(("html" "share/doc/sicp/")
+                               ("sicp.info" "share/info/"))
+             #:phases #~(modify-phases %standard-phases
+                          (add-after 'unpack 'remove-obsolete-commands
+                            (lambda _
+                              ;; Reported upstream:
+                              ;; https://github.com/sarabander/sicp/issues/46.
+                              (substitute* "sicp-pocket.texi"
+                                (("@setshortcontentsaftertitlepage")
+                                 ""))))
+                          (add-before 'install 'build
+                            (lambda _
+                              (invoke "makeinfo" "--no-split"
+                                      "--output=sicp.info"
+                                      "sicp-pocket.texi"))))))
+      (home-page "https://sarabander.github.io/sicp")
+      (synopsis "Structure and Interpretation of Computer Programs")
+      (description "Structure and Interpretation of Computer Programs (SICP) is
+a textbook aiming to teach the principles of computer programming.
+
+Using Scheme, a dialect of the Lisp programming language, the book explains
+core computer science concepts such as abstraction in programming,
+metalinguistic abstraction, recursion, interpreters, and modular programming.")
+      (license license:cc-by-sa4.0))))
+
+;; It may be removed after 2025-12-19.
+(define-deprecated/public-alias sicp book-sicp)
+
 (define-public book-sparc
  (package
    (name "book-sparc")
@@ -226,8 +226,8 @@ across a broad spectrum of applications.")
               (base32
                "13iviiwk1srpw9dmiwabkxv56v0pl0zggjp8zxy1419k5zzfsy34")))))))

-(define-public boost-with-python3
-  (deprecated-package "boost-with-python3" boost))
+(define-deprecated-package boost-with-python3
+  boost)

 (define-public boost-static
  (package
@@ -23,6 +23,7 @@
 ;;; Copyright © 2024 Zheng Junjie <873216071@qq.com>
 ;;; Copyright © 2025 Esther Flashner <esther@flashner.co.il>
 ;;; Copyright © 2025 André Batista <nandre@riseup.net>
+;;; Copyright © 2025 dan <i@dan.games>
 ;;;
 ;;; This file is part of GNU Guix.
 ;;;
@@ -906,7 +907,7 @@ also initializes the boards (RAM etc).")
                     (lambda* (#:key make-flags #:allow-other-keys)
                       (let* ((info-dir (string-append #$output "/share/info"))
                              (info (string-append info-dir
-                                                   "/DasUBoot.info.gz")))
+                                                   "/DasUBoot.info.zst")))
                         (with-directory-excursion "doc/output"
                           (apply invoke "make" "-C" "texinfo" "install-info"
                                  (string-append "infodir=" info-dir)
@@ -927,12 +928,16 @@ Info manual.")))
    (inherit u-boot)
    (name "u-boot-tools")
    (native-inputs
-     (modify-inputs (package-native-inputs u-boot)
-       (prepend python-coverage
-                python-filelock
-                python-pycryptodomex
-                python-pytest
-                python-pytest-xdist)))
+     (if (string-match "^x86_64-linux" (%current-system))
+         (modify-inputs (package-native-inputs u-boot)
+                          (prepend python-filelock
+                                   python-pycryptodomex
+                                   python-coverage
+                                   python-pytest
+                                   python-pytest-xdist))
+           (modify-inputs (package-native-inputs u-boot)
+                          (prepend python-filelock
+                                   python-pycryptodomex))))
    (arguments
     `(#:make-flags '("HOSTCC=gcc")
       #:test-target "tcheck"
@@ -1033,9 +1038,7 @@ CONFIG_TOOLS_KWBIMAGE=n")
               (invoke "test/image/test-imagetools.sh"))))
         ;; Only run full test suite on x86_64 systems, as many tests
         ;; assume x86_64.
-         ,@(if (string-match "^x86_64-linux"
-                             (or (%current-target-system)
-                                 (%current-system)))
+         ,@(if (string-match "^x86_64-linux" (%current-system))
               '((add-after 'check 'check-x86
                   (lambda* (#:key make-flags test-target tests? #:allow-other-keys)
                     (when tests?
@@ -1548,6 +1551,9 @@ Documentation} for more information (for example by running @samp{info
 (define-public u-boot-pinebook-pro-rk3399
  (make-u-boot-rockchip-package "pinebook-pro" 'rk3399))

+(define-public u-boot-nanopi-r4s-rk3399
+  (make-u-boot-rockchip-package "nanopi-r4s" 'rk3399))
+
 (define*-public (make-u-boot-bin-package u-boot-package
                                         #:key
                                         (u-boot-bin "u-boot.bin"))
@@ -193,15 +193,15 @@ ungoogled-chromium.")
 (define-public passff-host
  (package
    (name "passff-host")
-    (version "1.2.4")
-    (home-page "https://github.com/passff/passff-host")
+    (version "1.2.5")
+    (home-page "https://codeberg.org/PassFF/passff-host")
    (source (origin
              (method git-fetch)
              (uri (git-reference (url home-page) (commit version)))
              (file-name (git-file-name name version))
              (sha256
               (base32
-                "1lcwa1qzfxlifmj33qndp1wgi6yx6vj21ir0az79vhm5k03p961z"))))
+                "01kw5w6ihm4d6l5va7c0mb7539rnmqfn16c9w543xf5s0n5f2i7h"))))
    (build-system copy-build-system)
    (arguments
     (let ((native-manifests "lib/icecat/native-messaging-hosts"))
@@ -231,15 +231,15 @@ properly.")
 (define passff
  (package
    (name "passff")
-    (version "1.16")
-    (home-page "https://github.com/passff/passff")
+    (version "1.23")
+    (home-page "https://codeberg.org/passff/passff")
    (source (origin
              (method git-fetch)
              (uri (git-reference (url home-page) (commit version)))
              (file-name (git-file-name name version))
              (sha256
               (base32
-                "0y3cbgy89lgvq6lfabp7mi1zhphdvihcccn3yw5mmaql9yrdm5kc"))))
+                "0y6ji3mqmp9dadj1rm712n1bjpl021a4yssv7m1ydllmw10gs009"))))
    (propagated-inputs (list passff-host))
    (build-system copy-build-system)
    (properties '((addon-id . "passff@invicem.pro")))
@@ -328,7 +328,7 @@ with the @uref{https://keepassxc.org, KeePassXC} password manager.")
 (define noscript
  (package
    (name "noscript")
-    (version "13.0.9")
+    (version "13.2.1")
    (source (origin
              (method url-fetch/zipbomb)
              (uri (string-append
@@ -336,7 +336,7 @@ with the @uref{https://keepassxc.org, KeePassXC} password manager.")
                    ".xpi"))
              (sha256
               (base32
-                "1xbisx3xqak9aj7nb2lh94an6yfldsl6a2g2qc87vxi1zwdbcnjj"))))
+                "16p63kg7zwnfss9sb3j2kn9m7dx9prh09h4vbz3b0pg5s7rrf0hr"))))
    (build-system copy-build-system)
    (properties '((addon-id . "{73a6fe31-595d-460b-a920-fcc0f8843232}")))
    (arguments
@@ -371,7 +371,7 @@ resembles Python.")
     (list meson
           ninja/pinned
           python-colorama
-           python-cython-3
+           python-cython
           python-pyproject-metadata
           python-tomli
           python-typing-extensions
@@ -381,7 +381,7 @@ resembles Python.")
           git-minimal/pinned
           patchelf
           pkg-config
-           python-cython-3
+           python-cython
           python-gitpython
           python-pytest
           python-pytest-cov
@@ -1117,7 +1117,7 @@ maintenance-related files, for convenience.")
 (define-public maak
  (package
    (name "maak")
-    (version "0.2.3")
+    (version "0.2.9")
    (source
     (origin
       (method git-fetch)
@@ -1126,7 +1126,7 @@ maintenance-related files, for convenience.")
             (commit (string-append "v" version))))
       (file-name (git-file-name name version))
       (sha256
-        (base32 "15s6khifk7k002hr9mqgl45r3ipmvsc56z9z8skwclxsj6w1cddl"))))
+        (base32 "0108sj9rdqwprcx2ihlsfhbqiig08kah3k2yxc5w0yxzxdh8hzwv"))))
    (build-system guile-build-system)
    (arguments
     (list
@@ -1298,5 +1298,5 @@ The Waf Book and in the API docs

 ;; waf is the final program no need to prefix it with "python-", the same way
 ;; as meson or ninja which are written in Python as well.
-(define-public python-waf
-  (deprecated-package "python-waf" waf))
+(define-deprecated-package python-waf
+  waf)
@@ -14,7 +14,7 @@
 ;;; Copyright © 2021 David Dashyan <mail@davie.li>
 ;;; Copyright © 2021 Foo Chuan Wei <chuanwei.foo@hotmail.com>
 ;;; Copyright © 2022 (unmatched parenthesis <paren@disroot.org>
-;;; Copyright © 2022 Artyom V. Poptsov <poptsov.artyom@gmail.com>
+;;; Copyright © 2022, 2025 Artyom V. Poptsov <poptsov.artyom@gmail.com>
 ;;; Copyright © 2022 Ekaitz Zarraga <ekaitz@elenq.tech>
 ;;; Copyright © 2022 ( <paren@disroot.org>
 ;;; Copyright © 2022 Antero Mejr <antero@mailbox.org>
@@ -149,8 +149,8 @@ slicing.")
     (license license:boost1.0))))

 (define-public cproc
-  (let ((commit "70fe9ef1810cc6c05bde9eb0970363c35fa7e802")
-        (revision "2"))
+  (let ((commit "14a8916e23bc6daebcb54f1384fa0eb2455072e3")
+        (revision "3"))
    (package
      (name "cproc")
      (version (git-version "0.0" revision commit))
@@ -162,7 +162,7 @@ slicing.")
               (commit commit)))
         (file-name (git-file-name name version))
         (sha256
-          (base32 "1qmgzll7z7mn587azkj4cizyyd8ii6iznfxpc66ja08140sbn9yx"))
+          (base32 "1yrs1ccsjypfsjsmxxjspaggn0bjwifs2slalnpvsrgzxw5559bx"))
         (patches (search-patches "cproc-extra-linkflags.patch"))))
      (build-system gnu-build-system)
      (arguments
@@ -958,17 +958,17 @@ replacement for the syslog() call, but retains its ease of use.")
 (define-public liblognorm
  (package
    (name "liblognorm")
-    (version "2.0.6")
+    (version "2.0.7")
    (source
     (origin
       (method git-fetch)
       (uri (git-reference
-             (url "https://github.com/rsyslog/liblognorm.git")
+             (url "https://github.com/rsyslog/liblognorm")
             (commit (string-append "v" version))))
       (file-name (git-file-name name version))
       (sha256
        (base32
-         "1pyy1swvq6jj12aqma42jimv71z8m66zy6ydd5v19cp2azm4krml"))))
+         "1syh3lx58q6izzgmpq8pj4j5aw6qr5nzplnmk42f2alrw38sprd5"))))
    (build-system gnu-build-system)
    (arguments
     (list
@@ -1437,7 +1437,7 @@ Telemetry Transport (MQTT) publish-subscribe messaging protocol.")
 (define-public mimalloc
  (package
    (name "mimalloc")
-    (version "2.1.2")
+    (version "3.0.9")
    (source (origin
              (method git-fetch)
              (uri (git-reference
@@ -1446,7 +1446,7 @@ Telemetry Transport (MQTT) publish-subscribe messaging protocol.")
              (file-name (git-file-name name version))
              (sha256
               (base32
-                "1pyf05snc1ib7zjjm9kspvbmynd8lmxqw72qcpz8lcyzyywmz24i"))))
+                "0y249bmzx6rmc1m8a29d0x2cd52nik2dwqpzg9hd1xkvl9b8z7jc"))))
    (build-system cmake-build-system)
    (arguments
     `(#:build-type "Release"
@@ -1572,9 +1572,9 @@ Telemetry Transport (MQTT) publish-subscribe messaging protocol.")
                       ,(string-append "--prefix=" #$output)
                       ,(string-append "--mandir=" #$output "/share/man")
                       ,(string-append "--cores="
-                                       (if parallel-build?
-                                           (number->string (parallel-job-count))
-                                           "1")))))))))
+                                       ;; Tests require parallelism, and set upper limit as test
+                                       ;; runtime scales superliniearly in the number of cores.
+                                       (number->string (max 2 (min 8 (parallel-job-count))))))))))))
    (home-page "https://github.com/concurrencykit/ck")
    (synopsis "C library for concurrent systems")
    (description "Concurrency Kit (@code{ck}) provides concurrency primitives,
@@ -1,124 +0,0 @@
-;;; GNU Guix --- Functional package management for GNU
-;;; Copyright © 2019 John Soo <jsoo1@asu.edu>
-;;;
-;;; This file is part of GNU Guix.
-;;;
-;;; GNU Guix is free software; you can redistribute it and/or modify it
-;;; under the terms of the GNU General Public License as published by
-;;; the Free Software Foundation; either version 3 of the License, or (at
-;;; your option) any later version.
-;;;
-;;; GNU Guix is distributed in the hope that it will be useful, but
-;;; WITHOUT ANY WARRANTY; without even the implied warranty of
-;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
-;;; GNU General Public License for more details.
-;;;
-;;; You should have received a copy of the GNU General Public License
-;;; along with GNU Guix.  If not, see <http://www.gnu.org/licenses/>.
-
-(define-module (gnu packages cedille)
-  #:use-module (gnu packages)
-  #:use-module (gnu packages agda)
-  #:use-module (gnu packages emacs-xyz)
-  #:use-module (gnu packages haskell)
-  #:use-module (gnu packages haskell-xyz)
-  #:use-module (guix build-system emacs)
-  #:use-module (guix git-download)
-  #:use-module ((guix licenses) #:prefix license:)
-  #:use-module (guix packages))
-
-(define-public cedille
-  (package
-    (name "cedille")
-    (version "1.1.2")
-    (source
-     (origin
-       (method git-fetch)
-       (uri (git-reference
-             (url "https://github.com/cedille/cedille")
-             (commit (string-append "v" version))))
-       (file-name (git-file-name name version))
-       (sha256
-        (base32
-         "1h5s6ayh3s76z184jai3jidcs4cjk8s4nvkkv2am8dg4gfsybq22"))))
-    (inputs
-     (list agda agda-ial ghc ghc-alex ghc-happy))
-    (build-system emacs-build-system)
-    (arguments
-     `(#:phases
-       (modify-phases %standard-phases
-         (add-after 'unpack 'patch-cedille-paths
-           (lambda* (#:key outputs #:allow-other-keys)
-             (let ((out (assoc-ref outputs "out")))
-               (substitute* "cedille-mode.el"
-                 (("/usr/share/emacs/site-lisp/cedille-mode")
-                  (string-append
-                   out "/share/emacs/site-lisp/cedille")))
-               (substitute* "cedille-mode/cedille-mode-info.el"
-                 (("\\(concat cedille-path-el \"cedille-info-main.info\"\\)")
-                  (string-append
-                   "\"" out "/share/info/cedille-info-main.info.gz\"")))
-               #t)))
-         (add-after 'patch-cedille-paths 'copy-cedille-mode
-           (lambda* (#:key outputs #:allow-other-keys)
-             (let* ((out (assoc-ref outputs "out"))
-                    (lisp
-                     (string-append
-                      out "/share/emacs/site-lisp/cedille/")))
-               (mkdir-p (string-append lisp "cedille-mode"))
-               (copy-recursively
-                "cedille-mode"
-                (string-append lisp "cedille-mode"))
-               (mkdir-p (string-append lisp "se-mode"))
-               (copy-recursively
-                "se-mode"
-                (string-append lisp "se-mode"))
-               #t)))
-         ;; FIXME: Byte compilation fails
-         (delete 'build)
-         (replace 'check
-           (lambda _
-             (with-directory-excursion "cedille-tests"
-               (invoke "sh" "run-tests.sh"))))
-         (add-after 'unpack 'patch-libraries
-           (lambda _ (patch-shebang "create-libraries.sh") #t))
-         (add-after 'unpack 'copy-ial
-           (lambda* (#:key inputs #:allow-other-keys)
-             (copy-recursively
-              (search-input-directory inputs "/include/agda/ial")
-              "ial")
-             ;; Ambiguous module if main is included from ial
-             (delete-file "ial/main.agda")
-             #t))
-         (add-after 'check 'build-cedille
-           ;; Agda has a hard time with parallel compilation
-           (lambda _
-             (invoke "touch" "src/Templates.hs")
-             (make-file-writable  "src/Templates.hs")
-             (invoke "touch" "src/templates.agda")
-             (make-file-writable  "src/templates.agda")
-             (invoke "make" "--jobs=1")))
-         (add-after 'install 'install-cedille
-           (lambda* (#:key outputs #:allow-other-keys)
-             (let ((out (assoc-ref outputs "out")))
-               (copy-recursively
-                "lib" (string-append out "/lib/cedille"))
-               (install-file "cedille" (string-append out "/bin"))
-               (install-file "core/cedille-core"
-                             (string-append out "/bin"))
-               (install-file "docs/info/cedille-info-main.info"
-                             (string-append out "/share/info"))
-               #t))))))
-    (home-page "https://cedille.github.io/")
-    (synopsis
-     "Language based on Calculus of Dependent Lambda Eliminations")
-    (description
-     "Cedille is an interactive theorem-prover and dependently typed
-programming language, based on extrinsic (aka Curry-style) type theory.  This
-makes it rather different from type theories like Coq and Agda, which are
-intrinsic (aka Church-style).  In Cedille, terms are nothing more than
-annotated versions of terms of pure untyped lambda calculus.  In contrast, in
-Coq or Agda, the typing annotations are intrinsic parts of terms.  The typing
-annotations can only be erased as an optimization under certain conditions,
-not by virtue of the definition of the type theory.")
-    (license license:expat)))
@@ -819,7 +819,7 @@ format.")
 (define-public cppcheck
  (package
    (name "cppcheck")
-    (version "2.17.1")
+    (version "2.18.0")
    (source (origin
      (method git-fetch)
      (uri (git-reference
@@ -827,11 +827,12 @@ format.")
             (commit version)))
      (file-name (git-file-name name version))
      (sha256
-       (base32 "19ap9ai9s4vsygyqfa215mrmpz4vki63d5b4qdb89zvbldaf3hlf"))
+       (base32 "1551pbbvx43j5jl5jz725km7gd65fizf9y7j66anjmdmqzccpdmn"))
       (patches (search-patches "cppcheck-fix-basedir-test.patch"))))
    (build-system cmake-build-system)
    (arguments
-     '(#:configure-flags '("-DBUILD_TESTS=ON")))
+     '(#:parallel-tests? #f
+       #:configure-flags '("-DBUILD_TESTS=ON")))
    (home-page "https://cppcheck.sourceforge.io")
    (synopsis "Static C/C++ code analyzer")
    (description "Cppcheck is a static code analyzer for C and C++.  Unlike
@@ -1100,6 +1101,21 @@ generation.")
       (sha256
        (base32 "1zn701fgmbk29y45p49sajaswm01i2bv89ds2kkbiq8i0p2cr08w"))))))

+(define-public googletest-1.13
+  (package
+    (inherit googletest)
+    (name "googletest")
+    (version "1.13.0")
+    (source
+     (origin
+       (method git-fetch)
+       (uri (git-reference
+              (url "https://github.com/google/googletest")
+              (commit (string-append "v" version))))
+       (file-name (git-file-name name version))
+       (sha256
+        (base32 "1x5lr1k4kgw3i8d7c12vp759p0w8c8r2y8lwvqswswxvwygw8lid"))))))
+
 (define-public googletest-1.8
  (package
    (inherit googletest)
@@ -2378,14 +2394,14 @@ since the last commit or what tests are currently failing.")
 (define-public python-coverage
  (package
    (name "python-coverage")
-    (version "7.9.2")
+    (version "7.11.0")
    (source
     (origin
       (method url-fetch)
       (uri (pypi-uri "coverage" version))
       (sha256
        (base32
-         "12qcm2j4bnc2gp6sci9brly2k406gp4jwjfpzxj04ag3a7x28w4r"))))
+         "0l403f6d59q8rik9vvzb6982qad0zrfj87dqydzsz8hwmh2dayqn"))))
    (build-system pyproject-build-system)
    (arguments
     (list
@@ -2401,6 +2417,7 @@ since the last commit or what tests are currently failing.")
         "--ignore=tests/test_venv.py"
         "--ignore=tests/test_plugins.py"
         "--ignore=tests/test_debug.py"
+         "--ignore=tests/test_core.py"
         ;; XXX: Unclear why these fail.
         "--ignore=tests/test_python.py"
         "--deselect=tests/test_concurrency.py\
@@ -2429,7 +2446,12 @@ since the last commit or what tests are currently failing.")
         #$@(if (equal? (%current-system) "riscv64-linux")
                '("--deselect=tests/test_numbits.py::NumbitsOpTest::test_union"
                  "--deselect=tests/test_numbits.py::NumbitsOpTest::test_any_intersection")
-                '()))
+                '())
+         ;; Fails some "'p1c' not in 'Name" assertions (see:
+         ;; <https://github.com/nedbat/coveragepy/issues/2050#issuecomment-3489704251>).
+         "--ignore=tests/test_api.py"
+         ;; This tests fails due to missing file tests/actual/testing/getty.
+         "-k" "not test_good_needs_scrubs")
      #:phases
      #~(modify-phases %standard-phases
          (add-after 'unpack 'patch-pyproject
@@ -3078,30 +3100,29 @@ backported from Python 2.7 for Python 2.4+.")
 (define-public behave
  (package
    (name "behave")
-    ;; The 1.2.6 release from 2018 has several problems with newer Python
-    ;; versions, so we package a recent snapshot.
-    (version "1.2.7.dev5")
-    (source (origin
-              (method git-fetch)
-              (uri (git-reference
-                    (url "https://github.com/behave/behave")
-                    (commit (string-append "v" version))))
-              (file-name (git-file-name name version))
-              (sha256
-               (base32
-                "14162pclfvy4wy2az4v9gkgb3v0b338zxrb2ikqcqifckrmk8nhv"))))
+    (version "1.3.3")
+    (source
+     (origin
+       (method git-fetch)
+       (uri (git-reference
+              (url "https://github.com/behave/behave")
+              (commit (string-append "v" version))))
+       (file-name (git-file-name name version))
+       (sha256
+        (base32 "1fxj51kailsdakqi7qbw700k258n7r3lv75mgxs45ld5xh2jfyxh"))))
    (build-system pyproject-build-system)
    (native-inputs
-     (list python-mock
-           python-assertpy
-           python-pathpy
+     (list python-assertpy
+           python-chardet
+           python-mock
+           python-path
           python-pyhamcrest
           python-pytest
           python-pytest-html
-           python-setuptools
-           python-wheel))
+           python-setuptools))
    (propagated-inputs
     (list python-colorama
+           python-cucumber-expressions
           python-cucumber-tag-expressions
           python-parse
           python-parse-type))
@@ -60,6 +60,7 @@
  #:use-module (gnu packages lisp)
  #:use-module (gnu packages maths)
  #:use-module (gnu packages mpi)
+  #:use-module (gnu packages onc-rpc)
  #:use-module (gnu packages perl)
  #:use-module (gnu packages pkg-config)
  #:use-module (gnu packages python)
@@ -493,23 +494,47 @@ stored with user-specified precision.")
 (define-public gromacs
  (package
    (name "gromacs")
-    (version "2022.4")
-    (source (origin
-              (method url-fetch)
-              (uri (string-append "http://ftp.gromacs.org/pub/gromacs/gromacs-"
-                                  version ".tar.gz"))
-              (sha256
-               (base32
-                "15vjwasxjq0h18dmzacjkdim51zrvr0ni42hbc30557j5xhbw4f5"))
-              ;; Our version of tinyxml2 is far newer than the bundled one and
-              ;; require fixing `testutils' code. See patch header for more info
-              (patches (search-patches "gromacs-tinyxml2.patch"))))
+    (version "2025.3")
+    (source
+     (origin
+       (method git-fetch)
+       (uri (git-reference
+              (url "https://gitlab.com/gromacs/gromacs")
+              (commit (string-append "v" version))))
+       (file-name (git-file-name name version))
+       (sha256
+        (base32
+         "1p9vvlbrysh8lwnbgy845pgx664k6mkw8p66f8bx468f7z2rp900"))
+       (modules '((guix build utils)))
+       (snippet
+        '(begin
+           ;; Still bundled: part of gromacs, source behind registration
+           ;; but free software anyways
+           ;;(delete-file-recursively "src/external/vmd_molfile")
+           ;; Still bundled: threads-based OpenMPI-compatible fallback
+           ;; designed to be bundled like that
+           ;;(delete-file-recursively "src/external/thread_mpi")
+           ;; Still bundled: Colvars is intended to be built as part of a
+           ;; molecular simulation program.
+           ;;(delete-file-recursively "src/external/colvars")
+           ;; Unbundling
+           (delete-file-recursively "src/external/lmfit")
+           (delete-file-recursively "src/external/clFFT")
+           (delete-file-recursively "src/external/fftpack")
+           (delete-file-recursively "src/external/build-fftw")
+           (delete-file-recursively "src/external/tng_io")
+           (delete-file-recursively "src/external/tinyxml2")
+           (delete-file-recursively "src/external/googletest")
+           (delete-file-recursively "src/external/muparser")
+           (delete-file-recursively "src/external/rpc_xdr")
+           (delete-file-recursively "src/external/vkfft")))))
    (build-system cmake-build-system)
    (arguments
     (list #:configure-flags
           #~(list "-DGMX_DEVELOPER_BUILD=on"     ; Needed to run tests
                   ;; Unbundling
                   "-DGMX_USE_LMFIT=EXTERNAL"
+                   "-DGMX_USE_MUPARSER=EXTERNAL"
                   "-DGMX_BUILD_OWN_FFTW=off"
                   "-DGMX_EXTERNAL_BLAS=on"
                   "-DGMX_EXTERNAL_LAPACK=on"
@@ -521,31 +546,29 @@ stored with user-specified precision.")
                   ;; Workaround for cmake/FindSphinx.cmake version parsing that does
                   ;; not understand the guix-wrapped `sphinx-build --version' answer
                   (string-append "-DSPHINX_EXECUTABLE_VERSION="
-                                  #$(package-version python-sphinx)))
+                                  #$(package-version python-sphinx))
+                   (string-append
+                    "-DCMAKE_CXX_FLAGS=-I"
+                    (search-input-directory %build-inputs "/include/tirpc")))
           #:phases
           #~(modify-phases %standard-phases
               (add-after 'unpack 'fixes
-                 (lambda* (#:key inputs #:allow-other-keys)
-                   ;; Still bundled: part of gromacs, source behind registration
-                   ;; but free software anyways
-                   ;;(delete-file-recursively "src/external/vmd_molfile")
-                   ;; Still bundled: threads-based OpenMPI-compatible fallback
-                   ;; designed to be bundled like that
-                   ;;(delete-file-recursively "src/external/thread_mpi")
-                   ;; Unbundling
-                   (delete-file-recursively "src/external/lmfit")
-                   (delete-file-recursively "src/external/clFFT")
-                   (delete-file-recursively "src/external/fftpack")
-                   (delete-file-recursively "src/external/build-fftw")
-                   (delete-file-recursively "src/external/tng_io")
-                   (delete-file-recursively "src/external/tinyxml2")
-                   (delete-file-recursively "src/external/googletest")
-                   (copy-recursively #$(package-source googletest)
+                 (lambda _
+                   (copy-recursively #$(package-source googletest-1.13)
                                     "src/external/googletest")
                   ;; This test warns about the build host hardware, disable
                   (substitute* "src/gromacs/hardware/tests/hardwaretopology.cpp"
                     (("TEST\\(HardwareTopologyTest, HwlocExecute\\)")
-                      "void __guix_disabled()")))))))
+                      "void __guix_disabled()"))
+                   (substitute* "cmake/gmxTestXDR.cmake"
+                     (("TestXDR\\.cpp\"" orig)
+                      (string-append orig " LINK_LIBRARIES -ltirpc")))
+                   (substitute* "CMakeLists.txt"
+                     (("set\\(GMX_EXTRA_LIBRARIES.*" orig)
+                      (string-append
+                       orig "\nlist(APPEND GMX_EXTRA_LIBRARIES \"-ltirpc\")\n")))
+                   (substitute* "src/external/CMakeLists.txt"
+                     (("add_subdirectory\\(rpc_xdr\\)") "")))))))
    (native-inputs
     (list doxygen
           graphviz
@@ -556,7 +579,9 @@ stored with user-specified precision.")
    (inputs
     (list fftwf
           `(,hwloc-2 "lib")
+           libtirpc
           lmfit
+           muparser
           openblas
           perl
           tinyxml2
@@ -1185,16 +1185,19 @@ Chez Scheme.")
 (define-public chez-irregex
  (package
    (name "chez-irregex")
-    (version "0.9.4")
-    (source
-     (origin
-       (method git-fetch)
-       (uri (git-reference
-             (url "https://github.com/fedeinthemix/chez-irregex")
-             (commit (string-append "v" version))))
-       (sha256
-        (base32 "0jh6piylw545j81llay9wfivgpv6lcnwd81gm4w17lkasslir50q"))
-       (file-name (git-file-name name version))))
+    (version "0.9.11")
+    (source (origin
+              (method url-fetch)
+              (uri (string-append
+                    "http://synthcode.com/scheme/irregex/irregex-"
+                    version ".tar.gz"))
+              (sha256
+               (base32
+                "026kzl96pmwbjqdc7kh8rdh8ng813sjvdsik0dag5acza20sjm19"))
+              (patches
+               ;; TODO: Remove this patch if upstream release a new version.
+               ;; See https://github.com/ashinn/irregex/issues/49
+               (search-patches "chez-irregex-import-cond-expand.patch"))))
    (build-system gnu-build-system)
    (inputs
     (list chez-matchable)) ; for tests
@@ -1204,11 +1207,21 @@ Chez Scheme.")
     (list chez-scheme))
    (arguments
     (list #:make-flags (chez-make-flags name version)
-           #:test-target "test"
+           #:tests? #f                  ; no test available for Chez Scheme
           #:phases #~(modify-phases %standard-phases
                        (replace 'configure
-                          #$configure-chezschemelibdirs))))
-    (home-page "https://github.com/fedeinthemix/chez-irregex")
+                          #$configure-chezschemelibdirs)
+                        (replace 'build
+                          (lambda* (#:key make-flags #:allow-other-keys)
+                            (apply invoke `("make" "chez-build"
+                                            ,@make-flags))))
+                        (replace 'install
+                          (lambda* (#:key make-flags #:allow-other-keys)
+                            (apply invoke `("make" "chez-install"
+                                            ,@make-flags))
+                            (apply invoke `("make" "chez-install-src"
+                                            ,@make-flags)))))))
+    (home-page "https://synthcode.com/scheme/irregex")
    (synopsis "Portable regular expression library for Scheme")
    (description "This package provides a portable and efficient
 R[4567]RS implementation of regular expressions, supporting both POSIX
@@ -1373,3 +1386,40 @@ required to port the program @code{Scmutils} to Chez Scheme.")
 Scmutils program to Chez Scheme.  The port consists of a set of
 libraries providing most of the functionality of the original.")
    (license license:gpl3+)))
+
+(define-public schemesh
+  (package
+    (name "schemesh")
+    (version "0.9.2")
+    (source
+     (origin
+       (method git-fetch)
+       (uri (git-reference
+              (url "https://github.com/cosmos72/schemesh")
+              (commit (string-append "v" version))))
+       (file-name (git-file-name name version))
+       (sha256 (base32 "0rnd2mz3vnsxdac5q7i625mkmfc1znp865wxdqqx1c6dqb26bqrv"))))
+    (build-system gnu-build-system)
+    (arguments
+     (list #:tests? #f
+           #:phases
+           #~(modify-phases %standard-phases
+               (add-after 'unpack 'patch-Makefile
+                 (lambda _
+                   (substitute* "Makefile"
+                     (("CC=cc")
+                      (string-append "CC=" #$(cc-for-target)))
+                     (("^(prefix[^/]*)/.*" all prefix)
+                      (string-append prefix #$output "\n")))))
+               (delete 'configure))))
+    (inputs (list chez-scheme
+                  lz4
+                  zlib
+                  ncurses
+                  `(,util-linux "lib")))
+    (home-page "https://github.com/cosmos72/schemesh")
+    (synopsis "Unix shell and Lisp REPL, fused together")
+    (description "Schemesh is an interactive shell scriptable in Lisp.  It
+supports interactive line editing, autocompletion, history and the familiar Unix
+shell syntax.")
+    (license license:gpl2)))
@@ -72,7 +72,7 @@
 (define-public cuirass
  (package
    (name "cuirass")
-    (version "1.3.2")
+    (version "1.3.3")
    (source
     (origin
       (method git-fetch)
@@ -82,7 +82,7 @@
       (file-name (git-file-name name version))
       (sha256
        (base32
-         "0d6ngj51q3pixi2qakc6asvaigqg0cw1qvbwvpkx285zm9csx1vd"))))
+         "0zq56wdjyxnmhr93358db95cc9i7qkffk98vscjr26pb4ab3ym21"))))
    (build-system gnu-build-system)
    (arguments
     (list #:modules `((guix build utils)
@@ -156,15 +156,12 @@ using the CMake build system.")
 (define %common-disabled-tests/hurd
  '("CTestTestTimeout"
    "CTestTestRerunFailed"
-    "RunCMake.CompilerChange"
    "RunCMake.ctest_test"
-    "RunCMake.file"
-    "RunCMake.BundleUtilities"
-    "RunCMake.configure_file"
    "RunCMake.CTestTimeout"
    "RunCMake.CTestTimeoutAfterMatch"
-    "RunCMake.CommandLine"
-    "RunCMake.CTestCommandLine"))
+    "RunCMake.CTestCommandLine"
+    ;; Fixed in v4.0.0
+    "RunCMake.RuntimePath"))

 (define %preserved-third-party-files
  '(;; 'Source/cm_getdate.c' includes archive_getdate.c wholesale, so it must
@@ -247,15 +244,7 @@ using the CMake build system.")
          ;; CMake uses its own configure script.
          (replace 'configure
            (lambda* (#:key (configure-flags '()) #:allow-other-keys)
-              (apply invoke "./configure" configure-flags)))
-          #$@(if (target-hurd?)
-                 #~((add-after 'unpack 'patch-hurd
-                      (lambda _
-                        ;; Version 3.25.0 has a similar fix.
-                        (substitute* "Utilities/cmlibuv/src/unix/udp.c"
-                          (("!defined\\(__QNX__\\)")
-                           "!defined(__GNU__)")))))
-                 #~()))))
+              (apply invoke "./configure" configure-flags))))))
    (inputs
     (list bzip2
           curl
@@ -424,7 +424,7 @@ COCOMO model or user-provided parameters.")
 (define-public cloc
  (package
    (name "cloc")
-    (version "2.02")
+    (version "2.06")
    (source
     (origin
       (method git-fetch)
@@ -433,7 +433,7 @@ COCOMO model or user-provided parameters.")
             (commit (string-append "v" version))))
       (file-name (git-file-name name version))
       (sha256
-        (base32 "1syh1gppjr3p2m9mq0zm3n47bhaksxcn5bx1nwqc29xn404c2fm9"))))
+        (base32 "02l56ks3p3344nf6lz9s3aym9f0xslkns8q8d8zm1i3whf98iymv"))))
    (build-system gnu-build-system)
    (inputs
     (list bash-minimal
@@ -627,6 +627,21 @@ functionality such as HTML output.")
       (sha256
        (base32 "13xmr249c6qygm14gilb0icrsgb35ghsrr14a1zvppmxy9jf5a7g"))))
    (build-system pyproject-build-system)
+    (arguments
+     (list
+      #:phases
+      #~(modify-phases %standard-phases
+          (add-after 'unpack 'patch-source
+            (lambda _
+              ;; Prevent setuptools.errors.InvalidConfigError:
+              ;; License classifiers have been superseded by license expressions
+              ;; (see https://peps.python.org/pep-0639/). Please remove:
+              ;; License :: OSI Approved :: Apache Software License
+              ;; Reported upstream:
+              ;; https://github.com/eriwen/lcov-to-cobertura-xml/pull/65
+              (substitute* "setup.cfg"
+                (("\tLicense :: OSI Approved :: Apache Software License\n")
+                 "")))))))
    (native-inputs
     (list python-pytest
           python-setuptools
@@ -1042,17 +1057,17 @@ in a project.")
 (define-public universal-ctags
  (package
    (name "universal-ctags")
-    (version "6.1.20250525.0")
+    (version "6.2.1")
    (source
     (origin
       (method git-fetch)
       (uri (git-reference
             (url "https://github.com/universal-ctags/ctags")
-             (commit (string-append "p" version))))
+             (commit (string-append "v" version))))
       (file-name (git-file-name name version))
       (sha256
        (base32
-         "0nxhmpzkxixb303bsihd5j7n0d29ak2lgnqff920q3dm33y965sy"))
+         "04i9fhhifs82d39z2dskscp7v2885g7isjn9r9zm4wsl6dcnb5n7"))
       (modules '((guix build utils)))
       (snippet
        '(begin
@@ -1134,5 +1149,5 @@ requirements is not met.")
    (properties '((lint-hidden-cpe-vendors . ("vmware"))))
    (license license:expat)))

-(define-public python-xenon
-  (deprecated-package "python-xenon" xenon))
+(define-deprecated-package python-xenon
+  xenon)
@@ -9,7 +9,7 @@
 ;;; Copyright © 2019-2022 Marius Bakke <marius@gnu.org>
 ;;; Copyright © 2020, 2022 Timothy Sample <samplet@ngyro.com>
 ;;; Copyright © 2020 Guy Fleury Iteriteka <gfleury@disroot.org>
-;;; Copyright © 2021 Maxim Cournoyer <maxim@guixotic.coop>
+;;; Copyright © 2021, 2025 Maxim Cournoyer <maxim@guixotic.coop>
 ;;; Copyright © 2021 Chris Marusich <cmmarusich@gmail.com>
 ;;; Copyright © 2021 Julien Lepiller <julien@lepiller.eu>
 ;;; Copyright © 2021 Pierre Langlois <pierre.langlois@gmx.com>
@@ -38,6 +38,8 @@
  #:use-module (gnu packages base)
  #:use-module (gnu packages bash)
  #:use-module (gnu packages c)
+  #:use-module (gnu packages digest)
+  #:use-module (gnu packages elf)
  #:use-module (gnu packages gcc)
  #:use-module (gnu packages m4)
  #:use-module (gnu packages gawk)
@@ -1239,7 +1241,8 @@ ac_cv_c_float_format='IEEE (little-endian)'
              "--build=i686-unknown-linux-gnu"
              "--host=i686-unknown-linux-gnu"
              "--with-sysroot=/"
-              ,(string-append "--prefix=" out))))))))
+              ,(string-append "--prefix=" out))))))
+    (properties '((max-silent-time . 7200)))))

 (define gnu-make-mesboot
  (package
@@ -1837,7 +1840,8 @@ exec " gcc "/bin/" program
                      (format (current-error-port) "C_INCLUDE_PATH=~a\n" (getenv "C_INCLUDE_PATH"))
                      (format (current-error-port) "CPLUS_INCLUDE_PATH=~a\n" (getenv "CPLUS_INCLUDE_PATH"))
                      (format (current-error-port) "LIBRARY_PATH=~a\n"
-                              (getenv "LIBRARY_PATH"))))))))))))
+                              (getenv "LIBRARY_PATH"))))))))))
+    (properties '((timeout . 72000)))))    ;20 hours

 (define gcc-mesboot-wrapper
  ;; We need this so gcc-mesboot can be used to create shared binaries that
@@ -2248,40 +2252,40 @@ exec " gcc "/bin/" program
    (source (bootstrap-origin (package-source binutils)))
    (name "binutils-cross-boot0")
    (arguments
-     (append (list #:guile %bootstrap-guile
-                   #:implicit-inputs? #f
+     (ensure-keyword-arguments
+      (substitute-keyword-arguments (package-arguments binutils)
+        ((#:modules modules '((guix build gnu-build-system)
+                              (guix build utils)))
+         (cons '(ice-9 ftw) modules))
+        ((#:configure-flags cf ''())
+         #~(append (list #$(string-append "--target="
+                                          (boot-triplet))
+                         "--disable-gprofng") ;requires Bison
+                   #$cf))
+        ((#:phases phases '%standard-phases)
+         #~(modify-phases #$phases
+             (add-after 'install 'add-symlinks
+               (lambda* (#:key outputs #:allow-other-keys)
+                 ;; The cross-gcc invokes 'as', 'ld', etc, without the
+                 ;; triplet prefix, so add symlinks.
+                 (let ((out (assoc-ref outputs "out"))
+                       (triplet-prefix (string-append #$(boot-triplet)
+                                                      "-")))
+                   (define (has-triplet-prefix? name)
+                     (string-prefix? triplet-prefix name))
+                   (define (remove-triplet-prefix name)
+                     (substring name
+                                (string-length triplet-prefix)))

-                   #:modules '((guix build gnu-build-system)
-                               (guix build utils)
-                               (ice-9 ftw)) ; for 'scandir'
-                   #:phases
-                   #~(modify-phases %standard-phases
-                       (add-after 'install 'add-symlinks
-                         (lambda* (#:key outputs #:allow-other-keys)
-                           ;; The cross-gcc invokes 'as', 'ld', etc, without the
-                           ;; triplet prefix, so add symlinks.
-                           (let ((out (assoc-ref outputs "out"))
-                                 (triplet-prefix (string-append #$(boot-triplet)
-                                                                "-")))
-                             (define (has-triplet-prefix? name)
-                               (string-prefix? triplet-prefix name))
-                             (define (remove-triplet-prefix name)
-                               (substring name
-                                          (string-length triplet-prefix)))
-
-                             (with-directory-excursion (string-append out "/bin")
-                               (for-each (lambda (name)
-                                           (symlink name
-                                                    (remove-triplet-prefix name)))
-                                         (scandir "."
-                                                  has-triplet-prefix?))))))))
-             (substitute-keyword-arguments (package-arguments binutils)
-               ((#:configure-flags cf)
-                #~(append (list #$(string-append "--target="
-                                                 (boot-triplet))
-                                "--disable-gprofng") ;requires Bison
-                          #$cf)))))
-    (native-inputs '())                           ;no Bison
+                   (with-directory-excursion (string-append out "/bin")
+                     (for-each (lambda (name)
+                                 (symlink name
+                                          (remove-triplet-prefix name)))
+                               (scandir "."
+                                        has-triplet-prefix?)))))))))
+      (list #:guile %bootstrap-guile
+            #:implicit-inputs? #f)))
+    (native-inputs '())                 ;no Bison
    (inputs (%boot0-inputs))))

 (define libstdc++-boot0
@@ -2723,7 +2727,7 @@ memoized as a function of '%current-system'."
   (package
     (inherit gnumach-headers)
     (name "gnumach-headers-boot0")
-     (version "1.8+git20250304")
+     (version "1.8+git20250731")
     (source
      (origin
        (inherit (package-source gnumach-headers))
@@ -2737,7 +2741,7 @@ memoized as a function of '%current-system'."
                  "gnumach-" version ".tar.gz"))
            (sha256
             (base32
-              "1mmjlcbzk1fs64q6vz2p2irp7vgbmyvm5inj3bf522gx50b3v67q")))))))
+              "1dc40cf2s8jr6xhhbmy6khmig5zz1gpb4vc9c40aagccxf72jkpv")))))))
     (native-inputs (list autoconf-boot0 automake-boot0 texinfo-boot0))
     (arguments
      (substitute-keyword-arguments (package-arguments gnumach-headers)
@@ -2787,7 +2791,7 @@ memoized as a function of '%current-system'."
   (package
     (inherit hurd-headers)
     (name "hurd-headers-boot0")
-     (version "0.9.git20250420")
+     (version "0.9.git20251029")
     (source
      (origin
        (inherit (package-source hurd-headers))
@@ -2797,10 +2801,10 @@ memoized as a function of '%current-system'."
            (method url-fetch)
            (uri (string-append
                  "https://git.savannah.gnu.org/cgit/hurd/hurd.git/snapshot/"
-                  "hurd-v" version ".tar.gz"))
+                  "hurd-" version ".tar.gz"))
            (sha256
             (base32
-              "14ldrijzgqkvnii873vjlsmrjr3kvs1aksyc5b4ha8anlnnvdkg1")))))))
+              "0pjxh4qln8m7jznqlzsz81vi38chjv64jj9824dj7wkm36gxbn3a")))))))
     (native-inputs
      (list autoconf-boot0 automake-boot0 mig-boot0))
     (inputs '()))))
@@ -3241,7 +3245,8 @@ exec ~a/bin/~a-~a -B~a/lib -Wl,-dynamic-linker -Wl,~a/~a \"$@\"~%"
                                            "libstdc++")
                                          ,@(if (target-powerpc? (%current-system))
                                                (list static-bash-for-glibc)
-                                                '())))
+                                                '())
+                                          ,(gexp-input zstd-final "lib")))
             (substitute-keyword-arguments (package-arguments binutils)
               ((#:configure-flags flags #~'())
                ;; For gprofng, tell the build system where to look for libstdc++.
@@ -3251,13 +3256,58 @@ exec ~a/bin/~a-~a -B~a/lib -Wl,-dynamic-linker -Wl,~a/~a \"$@\"~%"
                                                  "libstdc++")
                                               "/lib")))))))
    (native-inputs (list bison-boot0
+                         pkg-config-final ;to detect zstd
                         libstdc++))              ;for gprofng
    (inputs
-     (match (%current-system)
-       ((? target-powerpc?)
-        `(("bash" ,static-bash-for-glibc)
-          ,@(%boot2-inputs)))
-       (_ (%boot2-inputs))))))
+     (modify-inputs (match (%current-system)
+                      ((? target-powerpc?)
+                       `(("bash" ,static-bash-for-glibc)
+                         ,@(%boot2-inputs)))
+                      (_ (%boot2-inputs)))
+       (append `(,zstd-final "lib"))))))
+
+(define dwz-final
+  (package
+    (inherit dwz)
+    (source (bootstrap-origin (package-source dwz)))
+    (arguments
+     (ensure-keyword-arguments
+      (package-arguments dwz)
+      (list #:guile %bootstrap-guile
+            #:implicit-inputs? #f
+            #:tests? #f
+            #:allowed-references (list "out" glibc-final
+                                       elfutils-final
+                                       (gexp-input gcc-final "lib")
+                                       xxhash-final
+                                       xz-final
+                                       zlib-final))))
+    (native-inputs (list pkg-config-final)) ;without test inputs
+    (inputs (modify-inputs (%boot6-inputs)
+              (append elfutils-final
+                      xxhash-final)))))
+
+(define elfutils-final
+  (package
+    (inherit elfutils)
+    (source (bootstrap-origin (package-source elfutils)))
+    (arguments
+     (ensure-keyword-arguments
+      (package-arguments elfutils)
+      (list #:guile %bootstrap-guile
+            #:implicit-inputs? #f
+            ;; There is no bunzip2 in the Hurd bootstrap binaries.
+            #:tests? (not (target-hurd?))
+            #:allowed-references (list "out" "bin"
+                                       bash-final
+                                       (gexp-input gcc-final "lib")
+                                       glibc-final
+                                       xz-final
+                                       zlib-final))))
+    (native-inputs (list m4-boot0))
+    (inputs (modify-inputs (%boot6-inputs)
+              (append xz-final
+                      zlib-final)))))

 (define zlib-final
  ;; Zlib used by GCC-FINAL.
@@ -3271,6 +3321,32 @@ exec ~a/bin/~a-~a -B~a/lib -Wl,-dynamic-linker -Wl,~a/~a \"$@\"~%"
       ,@(package-arguments zlib)))
    (inputs (%boot2-inputs))))

+(define zstd-final
+  ;; Zstd used by BINUTILS-FINAL.
+  (package
+    (inherit zstd)
+    (source (bootstrap-origin (package-source zstd)))
+    (arguments
+     (substitute-keyword-arguments
+         (ensure-keyword-arguments
+          (package-arguments zstd)
+          (list #:guile %bootstrap-guile
+                #:implicit-inputs? #f
+                #:allowed-references (list "out" "lib" glibc-final)))
+       ((#:phases phases '%standard-phases)
+        #~(modify-phases #$phases
+            ;; Avoid retaining references to bash & grep in the zstdless
+            ;; script.
+            (delete 'patch-command-file-names)
+            (add-after 'install 'unpatch-bash-shebangs
+              (lambda _
+                (with-directory-excursion (string-append #$output "/bin")
+                  (substitute* '("zstdgrep" "zstdless")
+                    (("#!/gnu/store/.*/bin/sh")
+                     "#!/bin/sh")))))
+            (delete 'patch-shebangs)))))
+    (inputs (%boot2-inputs))))
+
 (define/system-dependent ld-wrapper-boot3
  ;; A linker wrapper that uses the bootstrap Guile.
  (make-ld-wrapper "ld-wrapper-boot3"
@@ -3485,24 +3561,26 @@ exec ~a/bin/~a-~a -B~a/lib -Wl,-dynamic-linker -Wl,~a/~a \"$@\"~%"
 (define %boot5-inputs %boot4-inputs)
 (define with-boot5 with-boot4)

+(define pkg-config-final
+  (package
+    (inherit %pkg-config)               ;the native pkg-config
+    (arguments
+     (ensure-keyword-arguments
+      (package-arguments %pkg-config)
+      (list #:implicit-inputs? #f
+            #:guile %bootstrap-guile)))
+    (inputs (%boot2-inputs))))
+
 (define (make-gnu-make-final)
  "Compute the final GNU Make, which uses the final Guile."
-  (let ((pkg-config (package
-                      (inherit %pkg-config)       ;the native pkg-config
-                      (inputs `(("guile" ,guile-final)
-                                ,@(%boot5-inputs)))
-                      (arguments
-                       `(#:implicit-inputs? #f
-                         ,@(package-arguments %pkg-config))))))
-    (package
-      (inherit (package-with-bootstrap-guile gnu-make))
-      (inputs `(("guile" ,guile-final)
-                ,@(%boot5-inputs)))
-      (native-inputs `(("pkg-config" ,pkg-config)))
-      (arguments
-       `(#:implicit-inputs? #f
-         ,@(package-arguments gnu-make))))))
-
+  (package
+    (inherit (package-with-bootstrap-guile gnu-make))
+    (inputs `(("guile" ,guile-final)
+              ,@(%boot5-inputs)))
+    (native-inputs `(("pkg-config" ,pkg-config-final)))
+    (arguments
+     `(#:implicit-inputs? #f
+       ,@(package-arguments gnu-make)))))

 (define coreutils-final
  ;; The final Coreutils.  Treat them specially because some packages, such as
@@ -3549,6 +3627,9 @@ exec ~a/bin/~a-~a -B~a/lib -Wl,-dynamic-linker -Wl,~a/~a \"$@\"~%"
  (let ((sed (with-boot6 (package-with-bootstrap-guile sed))))
    (package/inherit sed (native-inputs `(("perl" ,perl-boot0))))))

+(define xxhash-final
+  ((compose with-boot6 package-with-bootstrap-guile) xxhash))
+
 (define-public %final-inputs
  ;; The 'glibc-final' package is not the same depending on what system is
  ;; targeted, so this whole list must be parameterized.
@@ -3574,19 +3655,20 @@ exec ~a/bin/~a-~a -B~a/lib -Wl,-dynamic-linker -Wl,~a/~a \"$@\"~%"
                              (native-inputs
                               (list (if (target-hurd?)
                                         glibc-utf8-locales-final/hurd
-                                         glibc-utf8-locales-final)))))
-                   ("zstd" ,zstd)))
+                                         glibc-utf8-locales-final)))))))
          ("sed" ,sed-final)
          ("grep" ,grep-final)
          ("xz" ,xz-final)
          ("coreutils" ,coreutils-final)
+          ("dwz" ,dwz-final)
          ("make" ,(make-gnu-make-final))
          ("bash" ,bash-final)
          ("ld-wrapper" ,ld-wrapper)
          ("binutils" ,binutils-final)
          ("gcc" ,gcc-final)
          ("libc" ,glibc-final)
-          ("libc:static" ,glibc-final "static"))))))
+          ("libc:static" ,glibc-final "static")
+          ("zstd" ,zstd-final))))))

 (define-public canonical-package
  (let ((name->package (mlambda (system)
@@ -4,7 +4,7 @@
 ;;; Copyright © 2014, 2015, 2018 Mark H Weaver <mhw@netris.org>
 ;;; Copyright © 2015 Taylan Ulrich Bayırlı/Kammer <taylanbayirli@gmail.com>
 ;;; Copyright © 2015, 2016 Eric Bavier <bavier@member.fsf.org>
-;;; Copyright © 2015, 2016, 2017, 2018, 2020, 2021, 2022, 2024 Ricardo Wurmus <rekado@elephly.net>
+;;; Copyright © 2015, 2016, 2017, 2018, 2020, 2021, 2022, 2024, 2025 Ricardo Wurmus <rekado@elephly.net>
 ;;; Copyright © 2015, 2017, 2018 Leo Famulari <leo@famulari.name>
 ;;; Copyright © 2015 Jeff Mickey <j@codemac.net>
 ;;; Copyright © 2015-2024 Efraim Flashner <efraim@flashner.co.il>
@@ -67,6 +67,7 @@
  #:use-module (guix git-download)
  #:use-module (guix build-system ant)
  #:use-module (guix build-system cmake)
+  #:use-module (guix build-system copy)
  #:use-module (guix build-system glib-or-gtk)
  #:use-module (guix build-system gnu)
  #:use-module (guix build-system go)
@@ -530,7 +531,14 @@ compressed with pbzip2 can be decompressed with bzip2).")
     (list
      #:configure-flags
      '(list "-DSHRINKWRAP_PREFER_STATIC=OFF"
-             "-DBUILD_TESTS=ON")))
+             "-DBUILD_TESTS=ON")
+      #:phases
+      '(modify-phases %standard-phases
+         (add-after 'unpack 'add-missing-header
+           (lambda _
+             (substitute* "include/shrinkwrap/xz.hpp"
+               (("#include <cstring>")
+                "#include <cstring>\n#include <cstdint>")))))))
    (propagated-inputs (list bzip2 xz zlib `(,zstd "lib")))
    (native-inputs (list pkg-config))
    (home-page "https://github.com/jonathonl/shrinkwrap")
@@ -543,7 +551,7 @@ formats, including zstd, xz, gzip, and bgzf.")
 (define-public xz
  (package
   (name "xz")
-   (version "5.4.5")
+   (version "5.8.1")
   (source (origin
            (method url-fetch)
            (uri (list (string-append "http://tukaani.org/xz/xz-" version
@@ -552,7 +560,7 @@ formats, including zstd, xz, gzip, and bgzf.")
                                      version ".tar.gz")))
            (sha256
             (base32
-              "1mmpwl4kg1vs6n653gkaldyn43dpbjh8gpk7sk0gps5f6jwr0p0k"))))
+              "0hsmg58a27jd1vq0lc6yp405978c1nfhqwndl7f10v1mk6sjay2h"))))
   (build-system gnu-build-system)
   (arguments
    `(#:phases
@@ -1460,74 +1468,87 @@ for most inputs, but the resulting compressed files are anywhere from 20% to
    (license license:asl2.0)
    (properties '((cpe-vendor . "google")))))

-(define-public p7zip
+(define-public 7zip
  (package
-    (name "p7zip")
-    (version "16.02")
-    (source (origin
-              (method url-fetch)
-              (uri (string-append "mirror://sourceforge/" name "/" name "/"
-                                  version "/" name "_" version
-                                  "_src_all.tar.bz2"))
-              (sha256
-               (base32
-                "07rlwbbgszq8i7m8jh3x6j2w2hc9a72dc7fmqawnqkwlwb00mcjy"))
-              (modules '((guix build utils)))
-              (snippet
-               '(begin
-                  ;; Remove non-free source files
-                  (for-each delete-file
-                            (append
-                             (find-files "CPP/7zip/Compress" "Rar.*")
-                             (find-files "CPP/7zip/Crypto" "Rar.*")
-                             (find-files "DOC/unRarLicense.txt")
-                             (find-files  "Utils/file_Codecs_Rar_so.py")))
-                  (delete-file-recursively "CPP/7zip/Archive/Rar")
-                  (delete-file-recursively "CPP/7zip/Compress/Rar")
-                  ;; Fix FTBFS with gcc-10.
-                  (substitute* "CPP/Windows/ErrorMsg.cpp"
-                    (("switch\\(errorCode\\) \\{")
-                     "switch(static_cast<HRESULT>(errorCode)) {"))))
-              (patches (search-patches "p7zip-CVE-2016-9296.patch"
-                                       "p7zip-CVE-2017-17969.patch"
-                                       "p7zip-fix-build-with-gcc-11.patch"
-                                       "p7zip-remove-unused-code.patch"))))
-    (build-system gnu-build-system)
+    (name "7zip")
+    (version "25.01")
+    (source
+     (origin
+       (method git-fetch)
+       (uri (git-reference
+              (url "https://github.com/ip7z/7zip")
+              (commit version)))
+       (sha256
+        (base32 "01jg1fkc2zsdngv3ag3pwq4x8i5x01hjxsk30n78ffwiv2ps4rmq"))
+       (file-name (git-file-name name version))
+       (modules '((guix build utils)
+                  (ice-9 regex)))
+       (snippet #~(begin
+                    (for-each
+                     delete-file
+                     (append (find-files "CPP/7zip/Compress" "^Rar.*")
+                             (find-files "DOC/unRarLicense.txt")))))))
+    (build-system copy-build-system)
    (arguments
-     `(#:make-flags
-       (list (string-append "DEST_HOME=" (assoc-ref %outputs "out")) "all3")
-       #:phases
-       (modify-phases %standard-phases
-         (replace 'configure
-           (lambda _
-             (copy-file
-               ,(cond ((target-x86-64?)
-                       "makefile.linux_amd64_asm")
-                      ((target-x86-32?)
-                       "makefile.linux_x86_asm_gcc_4.X")
-                      (else
-                        "makefile.linux_any_cpu_gcc_4.X"))
-               "makefile.machine")))
-         (replace 'check
-           (lambda* (#:key tests? #:allow-other-keys)
-             (when tests?
-               (invoke "make" "test")
-               (invoke "make" "test_7z")
-               (invoke "make" "test_7zr")))))))
-    (native-inputs
-      (cond ((target-x86-64?)
-             (list yasm))
-            ((target-x86-32?)
-             (list nasm))
-            (else '())))
-    (home-page "https://p7zip.sourceforge.net/")
-    (synopsis "Command-line file archiver with high compression ratio")
-    (description "p7zip is a command-line port of 7-Zip, a file archiver that
-handles the 7z format which features very high compression ratios.")
+     (list
+      #:install-plan
+      #~'(("DOC/" "share/doc/7zip")
+          ("CPP/7zip/UI/Console/_o/7z" "bin/")
+          ("CPP/7zip/Bundles/Format7zF/_o/7z.so" "lib/")
+          ("CPP/7zip/Bundles/SFXCon/_o/7zCon" "lib/7zCon.sfx"))
+      #:phases
+      #~(modify-phases %standard-phases
+          (delete 'configure)
+          (delete 'check)
+          (add-after 'unpack 'patch-sources
+            (lambda* (#:key outputs #:allow-other-keys)
+              (let* ((out (assoc-ref outputs "out"))
+                     (lib (string-append out "/lib")))
+                (substitute* "CPP/7zip/UI/Client7z/Client7z.cpp"
+                  (("if \\(!lib\\.Load\\(dllPrefix + FTEXT\\(kDllName\\)\\)\\)")
+                   (string-append "if (!lib.Load(FTEXT(\"" lib
+                                  "\") + FTEXT(kDllName)) || "
+                                  "!lib.Load(dllPrefix + FTEXT(kDllName)))")))
+                (substitute* "CPP/7zip/UI/Common/ArchiveCommandLine.cpp"
+                  (("s = FTEXT\\(\"\\.\"\\)")
+                   (string-append "s = FTEXT(\"" lib "\")"))
+                  (("s = fas2fs\\(g_ModuleDirPrefix\\)")
+                   (string-append "s = FTEXT(\"" lib "\") "
+                                  "FSTRING_PATH_SEPARATOR"))))))
+          (add-before 'install 'build
+            (lambda* _
+              (define make-flags
+                '#$(list "DISABLE_RAR=1"
+                         (string-append "CC=" (cc-for-target))
+                         (string-append "CXX=" (cxx-for-target))
+                         (string-append "PLATFORM="
+                                        (cond
+                                         ((target-x86-64?) "x64")
+                                         ((target-x86-32?) "x86")
+                                         ((target-arm32?) "arm")
+                                         ((target-aarch64?) "arm64")
+                                         (#t "")))))
+              (with-directory-excursion "CPP/7zip/"
+                (for-each
+                 (lambda (dir)
+                   (with-directory-excursion dir
+                     (apply invoke "make" "-f" "makefile.gcc" make-flags)))
+                 '("UI/Console"
+                   "Bundles/Format7zF"
+                   "Bundles/SFXCon"))))))))
+    (home-page "https://7-zip.org")
+    (synopsis "7-zip file archiver")
+    (description
+     "7-zip is a command-line file compressor that supports a number
+of archive formats and features self-extracting archives.")
    (license (list license:lgpl2.1+
-                   license:gpl2+
+                   license:bsd-2
+                   license:bsd-3
                   license:public-domain))))

+(define-public p7zip
+  (deprecated-package "p7zip" 7zip))
+
 (define-public gzstream
  (package
    (name "gzstream")
@@ -1755,14 +1776,14 @@ or junctions, and always follows hard links.")
 (define-public zstd
  (package
    (name "zstd")
-    (version "1.5.6")
+    (version "1.5.7")
    (source
     (origin
       (method url-fetch)
       (uri (string-append "https://github.com/facebook/zstd/releases/download/"
                           "v" version "/zstd-" version ".tar.gz"))
       (sha256
-        (base32 "1h83si7s70jy7mcy0mv1c9mbkz66qqpawxs0zkmc3b1ayinf0acc"))))
+	(base32 "18vgkvh7w6zw4jn2aj1mp0yv98m4fk52ay6da0wh4pm194gyaczb"))))
    (build-system gnu-build-system)
    (outputs '("out"                    ;1.5MiB executables and documentation
               "lib"                    ;1.2MiB shared library and headers
@@ -1829,6 +1850,10 @@ or junctions, and always follows hard links.")
                            ;; This isn't picked up correctly in the Makefiles.
                            "EXT=.exe")
                          '())
+                   #$@(if (target-hurd?)
+                          ;; Uses symbols from pthread.
+                          `("PCMTLIB=-pthread")
+                          '())
                   ;; Auto-detection is over-engineered and buggy.
                   "PCLIBDIR=lib"
                   "PCINCDIR=include"
@@ -1856,22 +1881,8 @@ speed.")
                   license:public-domain ; zlibWrapper/examples/fitblk*
                   license:zlib))))      ; zlibWrapper/{gz*.c,gzguts.h}

-(define-public zstd-1.5.7
-  (package
-    (inherit zstd)
-    ;; Don't hide this package from the UI.
-    (properties '())
-    (version "1.5.7")
-    (source
-     (origin
-       (method url-fetch)
-       (uri (string-append "https://github.com/facebook/zstd/releases/download/"
-                           "v" version "/zstd-" version ".tar.gz"))
-       (sha256
-        (base32 "18vgkvh7w6zw4jn2aj1mp0yv98m4fk52ay6da0wh4pm194gyaczb"))))))
-
 (define-public pzstd
-  (package/inherit zstd-1.5.7
+  (package/inherit zstd
    (name "pzstd")
    (outputs '("out"))
    (inputs
@@ -2423,8 +2434,8 @@ with @code{deflate} but offers more dense compression.
 The specification of the Brotli Compressed Data Format is defined in RFC 7932.")
    (license license:expat)))

-(define-public google-brotli
-  (deprecated-package "google-brotli" brotli))
+(define-deprecated-package google-brotli
+  brotli)

 (define-public java-brotli
  (package
@@ -169,7 +169,7 @@ runtime (like runc or crun) for a single container.")
 (define-public distrobox
  (package
    (name "distrobox")
-    (version "1.8.1.2")
+    (version "1.8.2.1")
    (source
     (origin
       (method git-fetch)
@@ -177,7 +177,7 @@ runtime (like runc or crun) for a single container.")
             (url "https://github.com/89luca89/distrobox")
             (commit version)))
       (sha256
-        (base32 "168hjzifdvmlr4rplgp2jh4sg1dwjfmbrwj8589zys8r4kqvwfy1"))
+        (base32 "1la9qkhmj9277r6b2vfadb3fnvrwa435x6la5bwvm8ch0js2dfx0"))
       (file-name (git-file-name name version))))
    (build-system copy-build-system)
    (arguments
@@ -395,54 +395,46 @@ Layer-4 sockets.")
  (package
    (name "cni-plugins")
    (version "1.8.0")
-    ;; TODO: Unvendor.
    (source
     (origin
       (method git-fetch)
       (uri (git-reference
-             (url "https://github.com/containernetworking/plugins")
-             (commit (string-append "v" version))))
+              (url "https://github.com/containernetworking/plugins")
+              (commit (string-append "v" version))))
+       (file-name (git-file-name name version))
       (sha256
        (base32 "0bwczkf4kbrx47sa6mnp5kyn65dbg52qnlfyjyydrwshal8rz3gw"))
-       (file-name (git-file-name name version))))
+       (snippet
+        #~(begin (use-modules (guix build utils))
+                 (delete-file-recursively "vendor")))))
    (build-system go-build-system)
    (arguments
-     `(#:unpack-path "github.com/containernetworking/plugins"
-       #:tests? #f ; XXX: see stat /var/run below
-       #:phases (modify-phases %standard-phases
-                  (replace 'build
-                    (lambda _
-                      (with-directory-excursion
-                          "src/github.com/containernetworking/plugins"
-                        (invoke "./build_linux.sh"))))
-                  (replace 'check
-                    (lambda* (#:key tests? #:allow-other-keys)
-                      ;; Only pkg/ns tests run without root.
-                      (when tests?
-                        (with-directory-excursion
-                            "src/github.com/containernetworking/plugins/pkg/ns"
-                          (invoke "stat" "/var/run") ; XXX: test tries to stat this directory
-                          (invoke "unshare" "-rmn" "go" "test")))))
-                  (add-before 'check 'set-test-environment
-                    (lambda _
-                      (setenv "XDG_RUNTIME_DIR" "/tmp/cni-rootless")))
-                  (replace 'install
-                    (lambda* (#:key outputs #:allow-other-keys)
-                      (copy-recursively
-                       "src/github.com/containernetworking/plugins/bin"
-                       (string-append (assoc-ref outputs "out") "/bin")))))))
-    ;; XXX: Prepare for unvendor.
+     (list
+      #:install-source? #f
+      #:tests? #f ; TODO: Figure out how to run tests.
+      #:import-path "github.com/containernetworking/plugins"
+      #:phases
+      #~(modify-phases %standard-phases
+          (replace 'build
+            (lambda* (#:key import-path #:allow-other-keys)
+              (with-directory-excursion (string-append "src/" import-path)
+                ;; XXX: Migrate to go-build-system logic.
+                (invoke "./build_linux.sh"))))
+          (replace 'install
+            (lambda* (#:key import-path #:allow-other-keys)
+              (copy-recursively (string-append "src/"import-path "/bin")
+                                (string-append #$output "/bin")))))))
    (native-inputs
-     (list ;; go-github-com-alexflint-go-filemutex
-           ;; go-github-com-buger-jsonparser
-           ;; go-github-com-containernetworking-cni
-           ;; go-github-com-coreos-go-iptables
+     (list go-github-com-alexflint-go-filemutex
+           go-github-com-buger-jsonparser
+           go-github-com-containernetworking-cni
+           go-github-com-coreos-go-iptables
           go-github-com-coreos-go-systemd-v22
           go-github-com-godbus-dbus-v5
           go-github-com-insomniacslk-dhcp
-           ;; o-github-com-mattn-go-shellwords
+           go-github-com-mattn-go-shellwords
           ;; go-github-com-microsoft-hcsshim
-           ;; go-github-com-networkplumbing-go-nft
+           go-github-com-networkplumbing-go-nft
           go-github-com-onsi-ginkgo-v2
           go-github-com-onsi-gomega
           go-github-com-opencontainers-selinux
@@ -451,7 +443,7 @@ Layer-4 sockets.")
           go-github-com-vishvananda-netlink
           go-github-com-vishvananda-netns
           go-golang-org-x-sys
-           ;; go-sigs-k8s-io-knftables
+           go-sigs-k8s-io-knftables
           util-linux))
    (home-page "https://github.com/containernetworking/plugins")
    (synopsis "Container Network Interface (CNI) network plugins")
@@ -34,7 +34,7 @@
 ;;; Copyright © 2022, 2023, 2024 Maxim Cournoyer <maxim@guixotic.coop>
 ;;; Copyright © 2022 Antero Mejr <antero@mailbox.org>
 ;;; Copyright © 2023, 2025 Sughosha <Sughosha@disroot.org>
-;;; Copyright © 2023, 2024 Artyom V. Poptsov <poptsov.artyom@gmail.com>
+;;; Copyright © 2023, 2024, 2025 Artyom V. Poptsov <poptsov.artyom@gmail.com>
 ;;; Copyright © 2023 Liliana Marie Prikler <liliana.prikler@gmail.com>
 ;;; Copyright © 2023 Denis 'GNUtoo' Carikli <GNUtoo@cyberdimension.org>
 ;;; Copyright © 2023 Foundation Devices, Inc. <hello@foundationdevices.com>
@@ -49,6 +49,7 @@
 ;;; Copyright © 2025 Romain Garbage <romain.garbage@inria.fr>
 ;;; Copyright © 2024, 2025 Janneke Nieuwenhuizen <janneke@gnu.org>
 ;;; Copyright © 2025 Andreas Enge <andreas@enge.fr>
+;;; Copyright © 2025 Philippe Swartvagher <phil.swart@gmx.fr>
 ;;;
 ;;; This file is part of GNU Guix.
 ;;;
@@ -587,7 +588,7 @@ operating system functions.")
 (define-public lunasvg
  (package
    (name "lunasvg")
-    (version "3.2.1")
+    (version "3.5.0")
    (source
     (origin
       (method git-fetch)
@@ -596,11 +597,11 @@ operating system functions.")
             (commit (string-append "v" version))))
       (file-name (git-file-name name version))
       (sha256
-        (base32 "14ppk3k6sdbf3lwhv2gjqy32vwa7ck9jcj9xfk0fxwfqbvbp6608"))))
+        (base32 "1scmm1q35j3r87117p401fg3c1bx2nkiyvc2f3svvr2m2y9ihabr"))))
    (build-system cmake-build-system)
    (inputs (list plutovg))
    (arguments
-     '(#:configure-flags '("-DBUILD_SHARED_LIBS=ON")
+     '(#:configure-flags '("-DBUILD_SHARED_LIBS=ON -DUSE_SYSTEM_PLUTOVG=ON")
       #:tests? #f)) ;No tests.
    (home-page "https://github.com/sammycage/lunasvg")
    (synopsis "SVG rendering and manipulation library in C++")
@@ -625,18 +626,20 @@ Scalable Vector Graphics (SVG) files.")
       (file-name (git-file-name name version))))
    (build-system cmake-build-system)
    (arguments
-     '(;; No check target. Setting test-target to "unit_test" runs it twice.
-       #:tests? #f
-       #:configure-flags
-       '("-DBUILD_DOCUMENTATION=OFF" "-DBUILD_EXAMPLES=OFF")
+     (list
+      ;; No check target. Setting test-target to "unit_test" runs it twice.
+      #:tests? #f
+      #:configure-flags
+      #~(list "-DBUILD_DOCUMENTATION=OFF"
+              "-DBUILD_EXAMPLES=OFF"
+              "-DBUILD_UNIT_TESTS=OFF")
       #:phases
-       (modify-phases %standard-phases
+       #~(modify-phases %standard-phases
         ;; library_test fails in chroot.
         (add-after 'unpack 'skip-library-test
           (lambda _
             (substitute* "src/unit_tests/unit_tests.cmake"
-               (("misc/library_test.cpp") ""))
-             #t)))))
+               (("misc/library_test.cpp") "")))))))
    (native-inputs (list pkg-config))
    (home-page "https://github.com/rttrorg/rttr/")
    (synopsis "C++ Reflection Library")
@@ -681,7 +684,7 @@ the name of the library itself, which is written in C++.")
 (define-public plutovg
  (package
    (name "plutovg")
-    (version "0.0.13")
+    (version "1.3.1")
    (source
     (origin
       (method git-fetch)
@@ -690,7 +693,7 @@ the name of the library itself, which is written in C++.")
             (commit (string-append "v" version))))
       (file-name (git-file-name name version))
       (sha256
-        (base32 "0y2w0qhs89bnh440z1xj65vg4c71rlwinxgs3p8bvh2fmbi7lqff"))))
+        (base32 "1pkil2g9vvnhn7xycha5lwya0kp9h1ndg0lszgh8nkbilnavwig9"))))
    (build-system cmake-build-system)
    (arguments
     '(#:configure-flags '("-DBUILD_SHARED_LIBS=ON")
@@ -700,6 +703,33 @@ the name of the library itself, which is written in C++.")
    (description "PlutoVG is a standalone 2D vector graphics library in C.")
    (license license:expat)))

+(define-public plutosvg
+  (package
+    (name "plutosvg")
+    (version "0.0.7")
+    (source
+     (origin
+       (method git-fetch)
+       (uri (git-reference
+              (url "https://github.com/sammycage/plutosvg")
+              (commit (string-append "v" version))))
+       (file-name (git-file-name name version))
+       (sha256
+        (base32 "0vj21y4sr98mb337sr2yrgzs8ipgrnhd23qk3c1gykdxwgiy94p0"))))
+    (build-system cmake-build-system)
+    (native-inputs (list plutovg))
+    (arguments
+     '(#:configure-flags '("-DBUILD_SHARED_LIBS=ON")
+       #:tests? #f)) ;No tests.
+    (home-page "https://github.com/sammycage/plutovg")
+    (synopsis "Tiny SVG rendering library in C")
+    (description
+     "PlutoSVG is a compact and efficient SVG rendering library written in C.
+It is specifically designed for parsing and rendering SVG documents embedded
+in OpenType fonts, providing an optimal balance between speed and minimal
+memory usage. It is also suitable for rendering scalable icons.")
+    (license license:expat)))
+
 (define-public pystring
  (package
    (name "pystring")
@@ -1263,8 +1293,8 @@ data transfer object.")
 intuitive syntax and trivial integration.")
    (license license:expat)))

-(define-public json-modern-cxx
-  (deprecated-package "json-modern-cxx" nlohmann-json))
+(define-deprecated-package json-modern-cxx
+  nlohmann-json)

 (define-public jthread
  (let ((commit "0fa8d394254886c555d6faccd0a3de819b7d47f8")
@@ -1462,7 +1492,7 @@ tools (containers, algorithms) used by other QuantStack packages.")
 (define-public ccls
  (package
    (name "ccls")
-    (version "0.20241108")
+    (version "0.20250815")
    (source
     (origin
       (method git-fetch)
@@ -1470,7 +1500,7 @@ tools (containers, algorithms) used by other QuantStack packages.")
             (url "https://github.com/MaskRay/ccls")
             (commit version)))
       (sha256
-        (base32 "0474ldkkw1m46lkasdk8mn6z3q51vs4g1fbwml0sd70wgdb7h5nj"))
+        (base32 "1qpshqj08rc2ws5capyv8kl9rndh3sp2bbzambnx2l9b98pnkvj7"))
       (file-name (git-file-name name version))))
    (build-system cmake-build-system)
    (arguments
@@ -1696,16 +1726,16 @@ library.")
 (define-public rapidfuzz-cpp
  (package
    (name "rapidfuzz-cpp")
-    (version "3.3.2")
-    (source (origin
-              (method git-fetch)
-              (uri (git-reference
-                    (url "https://github.com/rapidfuzz/rapidfuzz-cpp")
-                    (commit (string-append "v" version))))
-              (file-name (git-file-name name version))
-              (sha256
-               (base32
-                "1im0k0pjg1fnzsixl5k7j706kwwdhkw15a9hpkyr8yqbmmbg9q82"))))
+    (version "3.3.3")
+    (source
+     (origin
+       (method git-fetch)
+       (uri (git-reference
+              (url "https://github.com/rapidfuzz/rapidfuzz-cpp")
+              (commit (string-append "v" version))))
+       (file-name (git-file-name name version))
+       (sha256
+        (base32 "1ma2hpp4c53fwjb8yi7rpkgivhsw7bkd8agw3sw5zwdlwsks88xv"))))
    (build-system cmake-build-system)
    (arguments
     (list
@@ -1713,8 +1743,9 @@ library.")
    (native-inputs (list catch2))
    (home-page "https://github.com/rapidfuzz/rapidfuzz-cpp")
    (synopsis "Rapid fuzzy string matching using the Levenshtein Distance")
-    (description "RapidFuzz is a fast string matching library for Python and
-C++, which is using the string similarity calculations from FuzzyWuzzy.")
+    (description
+     "RapidFuzz is a fast string matching library for Python and C++, which is
+using the string similarity calculations from FuzzyWuzzy.")
    (license license:expat)))

 (define-public cpplint
@@ -4735,6 +4766,58 @@ written in C99.")
    (home-page "https://github.com/aklomp/base64")
    (license license:bsd-2)))

+(define-public unordered-dense
+  (package
+    (name "unordered-dense")
+    (version "4.8.1")
+    (source
+     (origin
+       (method git-fetch)
+       (uri (git-reference
+             (url "https://github.com/martinus/unordered_dense")
+             (commit (string-append "v" version))))
+       (file-name (git-file-name name version))
+       (sha256
+        (base32 "02a86p2abrjkjw6kxd2gcxhknn50mcb1shrch8fhg72n534yblr5"))))
+    ;; This library uses CMake as build system to distribute the package, but
+    ;; uses Meson to build and launch tests. Hence, the phase 'check is replaced
+    ;; to mimic what is defined for meson-build-system.
+    (build-system cmake-build-system)
+    (arguments
+     (list
+      #:phases
+      #~(modify-phases %standard-phases
+          (replace 'check
+            (lambda* (#:key tests? #:allow-other-keys)
+              (when tests?
+                (substitute* "../source/test/app/doctest.h"
+                  (("#include <doctest\\.h>")
+                   "#include <doctest/doctest.h>"))
+                (setenv "FUZZ_CORPUS_BASE_DIR"
+                        (string-append (getcwd) "/../source/data/fuzz/"))
+                (invoke "meson" "setup" "../source/")
+                (invoke "ninja" "--verbose" "-j"
+                        (number->string (parallel-job-count)))
+                (setenv "MESON_TESTTHREADS"
+                        (number->string (parallel-job-count)))
+                (invoke "meson" "test")))))))
+    (native-inputs (list meson pkg-config))
+    (inputs (list doctest fmt boost))
+    (home-page "https://github.com/martinus/unordered_dense")
+    (synopsis "C++17 fast and densely stored hashmap and hashset library")
+    (description
+     "A fast & densely stored hashmap and hashset based on robin-hood backward
+shift deletion for C++17 and later.
+
+The classes @code{ankerl::unordered_dense::map} and
+@code{ankerl::unordered_dense::set} are (almost) drop-in replacements of
+@code{std::unordered_map} and @code{std::unordered_set.} While they don't have
+as strong iterator / reference stability guarantees, they are typically much
+faster.  Additionally, there are @code{ankerl::unordered_dense::segmented_map}
+and @code{ankerl::unordered_dense::segmented_set} with lower peak memory usage,
+and stable references (iterators are NOT stable) on insert.")
+    (license license:expat)))
+
 (define-public zpp-serializer
  (package
    (name "zpp-serializer")
@@ -41,6 +41,7 @@
 ;;; Copyright © 2024 Marco Baggio <guix@mawumag.com>
 ;;; Copyright © 2024, 2025 Spencer King <spencer.king@wustl.edu>
 ;;; Copyright © 2024-2025 Tor-björn Claesson <tclaesson@gmail.com>
+;;; Copyright © 2025 Jonas Freimuth <jonas.freimuth@posteo.de>
 ;;;
 ;;; This file is part of GNU Guix.
 ;;;
@@ -78,6 +79,7 @@
  #:use-module (gnu packages crypto)
  #:use-module (gnu packages curl)
  #:use-module (gnu packages databases)
+  #:use-module (gnu packages duckdb)
  #:use-module (gnu packages fontutils)
  #:use-module (gnu packages fribidi)
  #:use-module (gnu packages gawk)
@@ -1822,7 +1824,7 @@ code for possible problems.")
 (define-public r-colorout
  (package
    (name "r-colorout")
-    (version "1.2-2")
+    (version "1.3-3")
    (source
     (origin
       (method git-fetch)
@@ -1831,8 +1833,24 @@ code for possible problems.")
             (commit (string-append "v" version))))
       (file-name (git-file-name name version))
       (sha256
-        (base32 "1rsx69wjpa73c6x2hacvvvbzdzxn7wg06gizf97kasjdlb7azmp3"))))
+        (base32 "101mkdfk8w520vxqb5cl3spi8brgs5nrc6ciqidpxydmynp879fm"))))
    (build-system r-build-system)
+    (arguments
+     (list
+      #:phases
+      #~(modify-phases %standard-phases
+          (add-before 'install 'relax-c-standard
+            (lambda _
+              ;; XXX FIXME: $HOME/.R/Makevars seems to be the only way to
+              ;; set custom CFLAGS for R?
+              (setenv "HOME" (getcwd))
+              (mkdir-p ".R")
+              (with-directory-excursion ".R"
+                (with-output-to-file "Makevars"
+                  (lambda _
+                    (display (string-append
+                              "CFLAGS=-g -O2"
+                              " -std=gnu17"))))))))))
    (home-page "https://github.com/jalvesaq/colorout")
    (synopsis "Colorize output in the R REPL")
    (description "@code{colorout} is an R package that colorizes R output when
@@ -9163,6 +9181,16 @@ statistical analyses or create publication-ready tables and plots.")
        (base32 "01ly4hxwa64a0ya5gla8rvv72s9mcknsfznivjkh937pbjwb7iih"))))
    (properties `((upstream-name . "parallelDist")))
    (build-system r-build-system)
+    (arguments
+     (list
+      #:phases
+      #~(modify-phases %standard-phases
+          (add-before 'install 'relax-gcc-14-strictness
+            (lambda _
+              (substitute* "src/Makevars"
+                (("CXX_STD = CXX11")
+                 "CXX_STD = CXX11
+PKG_CXXFLAGS=-g -O2 -Wno-error=changes-meaning")))))))
    (propagated-inputs (list r-rcpp r-rcpparmadillo r-rcppparallel))
    (native-inputs (list r-dtw r-ggplot2 r-proxy r-rcppxptrutils r-testthat))
    (home-page "https://github.com/alexeckert/parallelDist")
@@ -11060,13 +11088,13 @@ matrix) for the double-truncated multinormal case.")
 (define-public r-rvest
  (package
    (name "r-rvest")
-    (version "1.0.4")
+    (version "1.0.5")
    (source
     (origin
       (method url-fetch)
       (uri (cran-uri "rvest" version))
       (sha256
-        (base32 "19lw0jk8d8x88z247hz761gwbx9f5n3yqnv63mn7pkwl55mpqw3x"))))
+        (base32 "005wadzdhxf6hgr8vl4nl0nfi2crj6467mhwbccqfy26njh38z0y"))))
    (build-system r-build-system)
    (arguments
     (list
@@ -12774,6 +12802,18 @@ weights.")
     (list
      #:phases
      '(modify-phases %standard-phases
+         ;; write_file_attachments copies files from the store but does not
+         ;; check their permissions. The files end up with read-only
+         ;; permissions.  As a result, they cannot be overwritten in
+         ;; subsequent passes.  This is especially problematic in downstream
+         ;; packages like r-bslib.
+         (add-after 'unpack 'fix-file-permissions
+           (lambda _
+             (substitute* "R/layers.R"
+               (("recursive = TRUE")
+                "recursive = TRUE, copy.mode = FALSE")
+               (("fs::file_copy\\(src, dest, overwrite = TRUE\\)")
+                "file.copy(src, dest, overwrite = TRUE, copy.mode = FALSE)"))))
         ;; One test fails when the current locale is the C locale.
         (add-before 'check 'set-test-locale
           (lambda _ (setenv "LC_ALL" "en_US.UTF-8"))))))
@@ -12869,12 +12909,11 @@ Markdown documents.  More generally, icons can be inserted in any
                     "inst/lib/bs5/dist/js/bootstrap.bundle.min.js")))))
    (properties
     `((upstream-name . "bslib")
-       (updater-ignored-native-inputs . ("r-rmarkdown" "r-shiny"))))
+       (updater-ignored-native-inputs . ("r-rmarkdown" "r-shiny"))
+       (updater-extra-native-inputs . ("r-testthat" "r-yaml"))))
    (build-system r-build-system)
    (arguments
     (list
-      ;; Some tests require shiny, leading to a dependency cycle.
-      #:tests? #false
      #:modules '((guix build r-build-system)
                  (guix build minify-build-system)
                  (guix build utils)
@@ -12883,6 +12922,19 @@ Markdown documents.  More generally, icons can be inserted in any
                           (guix build minify-build-system))
      #:phases
      #~(modify-phases (@ (guix build r-build-system) %standard-phases)
+          ;; When using themes, bslib copies theme dependencies, such as
+          ;; bootstrap.bundle.min.js or selectize.min.js, into a temporary
+          ;; directory.  Since these files are copied from the read-only
+          ;; store, they end up with read-only permissions.  As a result,
+          ;; bslib cannot overwrite these files as needed, because it has no
+          ;; permission to write to the files.
+          (add-after 'unpack 'fix-file-permissions
+            (lambda _
+              (substitute* "R/bs-dependencies.R"
+                (("overwrite = TRUE")
+                 (string-append "overwrite = TRUE, copy.mode = FALSE"))
+                (("file.copy\\(precompiled_css, out_file\\)")
+                 "file.copy(precompiled_css, out_file, copy.mode = FALSE)"))))
          (add-after 'unpack 'process-javascript
            (lambda* (#:key inputs #:allow-other-keys)
              (with-directory-excursion "inst/"
@@ -12900,7 +12952,37 @@ Markdown documents.  More generally, icons can be inserted in any
                            (,(assoc-ref inputs "js-bootstrap4-bundle")
                             . "lib/bs4/dist/js/bootstrap.bundle.min.js")
                            (,(assoc-ref inputs "js-bootstrap5-bundle")
-                             . "lib/bs5/dist/js/bootstrap.bundle.min.js")))))))))
+                             . "lib/bs5/dist/js/bootstrap.bundle.min.js"))))))
+          ;; Some tests require shiny, leading to a dependency cycle.
+          (add-after 'unpack 'disable-bad-tests
+            (lambda _
+              (with-directory-excursion "tests/testthat/"
+                (substitute* "test-layout.R"
+                  ((".*layout_columns\\(\\) with col_widths.*" m)
+                   (string-append m "skip('skip');\n")))
+                (substitute* "test-navs-legacy.R"
+                  ((".*navset_bar\\(\\) warns if using deprecated args.*" m)
+                   (string-append m "skip('skip');\n"))
+                  ((".*navset_bar\\(\\) warns if `navbar_options\\(\\)` collide with direct deprecated options.*" m)
+                   (string-append m "skip('skip');\n"))
+                  ((".*shiny:navbarPage\\(\\) is unaffected.*" m)
+                   (string-append m "skip('skip');\n"))
+                  ((".*navbar markup snapshots.*" m)
+                   (string-append m "skip('skip');\n")))
+                (substitute* "test-page.R"
+                  ((".*page_sidebar\\(\\).*" m)
+                   (string-append m "skip('skip');\n"))
+                  ((".*save_html\\(\\) works on components and pages with a custom theme.*" m)
+                   (string-append m "skip('skip');\n"))
+                  ((".*functions can handle trailing commas.*" m)
+                   (string-append m "skip('skip');\n")))
+                (substitute* "test-sidebar.R"
+                  ((".*sidebar\\(\\) - assigns a random `id` if collapsible and `id` not provided.*" m)
+                   (string-append m "skip('skip');\n"))
+                  ((".*sidebar\\(\\) - sets `aria-expanded` correctly on collapse toggle.*" m)
+                   (string-append m "skip('skip');\n"))
+                  ((".*sidebar\\(\\) - warns if `max_height_mobile` used with `open != 'always'.*" m)
+                   (string-append m "skip('skip');\n")))))))))
    (propagated-inputs
     (list r-base64enc
           r-cachem
@@ -12928,7 +13010,9 @@ Markdown documents.  More generally, icons can be inserted in any
           (uri "https://raw.githubusercontent.com/twbs/bootstrap/v5.3.1/dist/js/bootstrap.bundle.js")
           (sha256
            (base32
-             "1bp0a2fin80hwxvd260r1jk57snsgz74vahid64yb2sgj0rlmj8a"))))))
+             "1bp0a2fin80hwxvd260r1jk57snsgz74vahid64yb2sgj0rlmj8a"))))
+       ("r-testthat" ,r-testthat)
+       ("r-yaml" ,r-yaml)))
    (home-page "https://rstudio.github.io/bslib/")
    (synopsis "Custom Bootstrap Sass themes for shiny and rmarkdown")
    (description
@@ -19558,6 +19642,22 @@ phylogenies and ancestral character states.")
        (base32 "0by01x4qpf1pin5l61wmm600bmsnlnns9knwb0qmjlj72pmwfkqh"))))
    (properties `((upstream-name . "dtwclust")))
    (build-system r-build-system)
+    (arguments
+     (list
+      #:phases
+      #~(modify-phases %standard-phases
+          (add-before 'install 'relax-gcc-14-strictness
+            (lambda _
+              ;; XXX FIXME: $HOME/.R/Makevars seems to be the only way to
+              ;; set custom CFLAGS for R?
+              (setenv "HOME" (getcwd))
+              (mkdir-p ".R")
+              (with-directory-excursion ".R"
+                (with-output-to-file "Makevars"
+                  (lambda _
+                    (display (string-append
+                              "CXXFLAGS=-g -O2"
+                              " -Wno-error=changes-meaning\n"))))))))))
    (propagated-inputs
     (list r-clue
           r-cluster
@@ -19631,6 +19731,22 @@ normalizations, minimum variance matching, and so on.")
         "1xvcd97ikqsfdpk2fddy3k0z1ajqga7nv9bgac9c1wnjk1gqrpgh"))))
    (properties `((upstream-name . "SDMTools")))
    (build-system r-build-system)
+    (arguments
+     (list
+      #:phases
+      '(modify-phases %standard-phases
+         (add-after 'unpack 'patch-constants
+           (lambda _
+             ;; Older versions of R used to define PI.  As of R 4.5.0 the
+             ;; definition from the default math headers is supposed to be
+             ;; used instead.
+             (substitute* "src/pointinpolygon.c"
+               (("double TWOPI = " m)
+                (string-append "#define PI M_PI\n" m)))
+             (with-fluids ((%default-port-encoding "ISO-8859-1"))
+               (substitute* "src/vincenty.geodesics.c"
+                 (("#include <math.h>" m)
+                  (string-append m "\n#define PI M_PI")))))))))
    (propagated-inputs (list r-r-utils))
    (home-page "https://www.rforge.net/SDMTools/")
    (synopsis "Species distribution modelling tools")
@@ -21281,7 +21397,18 @@ provides some missing S-PLUS functionality in R.")
 #define ERROR	),error(R_problem_buf);}
 #define WARNING(x)		),warning(R_problem_buf);}
 #define WARN			WARNING(NULL)
-" m))))))))
+" m)))))
+         (add-before 'install 'fix-r-4.5.0
+            ;; Changes in R 4.5.0: C-Level Facilities.
+            ;; Strict R headers are now the default. This removes the legacy
+            ;; definitions of PI, Calloc, Realloc and Free: use M_PI,
+            ;; R_Calloc, R_Realloc or R_Free instead.
+            ;; https://cran.r-project.org/doc/manuals/r-release/NEWS.html
+            (lambda _
+              (substitute* "src/ut_alloc.c"
+                (("Calloc") "R_Calloc")
+                (("Free") "R_Free")
+                (("Realloc") "R_Realloc")))))))
    (propagated-inputs
     (list r-mass r-splus2r))
    (home-page "https://cran.r-project.org/web/packages/ifultools/")
@@ -22037,18 +22164,18 @@ posterior predictive checking, and quantifying uncertainty.")
 (define-public r-import
  (package
    (name "r-import")
-    (version "1.3.2")
+    (version "1.3.4")
    (source
     (origin
       (method url-fetch)
       (uri (cran-uri "import" version))
       (sha256
        (base32
-         "0ngakg8jqn76c05hrglp4hmmwvm5a9ldc9s1i83a9rc8lni6nb1j"))))
+         "0i87mlhjig7hzk8fgk3yij1shfwbwa4r05jagibqlv7rabls260g"))))
    (build-system r-build-system)
    (native-inputs
     (list r-knitr r-rmarkdown r-testthat))
-    (home-page "https://github.com/smbache/import")
+    (home-page "https://rticulate.github.io/import/")
    (synopsis "Import mechanism for R")
    (description
     "This is an alternative mechanism for importing objects from packages.
@@ -25714,6 +25841,17 @@ cross-validation.")
        (base32 "00pxi5zj68796b3qkil3w66z446ib61xl2l5v1qia1mc9fznlzri"))))
    (properties `((upstream-name . "blavaan")))
    (build-system r-build-system)
+    (arguments
+     (list
+      #:phases
+      #~(modify-phases %standard-phases
+          (add-after 'unpack 'relax-gcc-14-strictness
+            (lambda _
+              (substitute* "configure"
+                ;; Modifying src/Makevars directly is overruled.
+                (("config\\(\\)\"")
+                 "config()\"
+echo \"PKG_CXXFLAGS+=-g -O2 -Wno-error=changes-meaning\" >> src/Makevars")))))))
    (propagated-inputs (list r-bayesplot
                             r-bh
                             r-coda
@@ -29683,14 +29821,14 @@ package provides a minimal R interface by relying on the Rcpp package.")
 (define-public r-rcppparallel
  (package
    (name "r-rcppparallel")
-    (version "5.1.10")
+    (version "5.1.11-1")
    (source
     (origin
       (method url-fetch)
       (uri (cran-uri "RcppParallel" version))
       (sha256
        (base32
-         "0kgkjbiprfw90rdwq352z4jbnwb98s3dsv2xyzkzi413rq2709gb"))
+         "0qk3gaia5g1da5yqd9a3jcwp1f4jldj1a4r9cqpxbjqjh9a87371"))
       (modules '((guix build utils)))
       (snippet
        '(delete-file-recursively "src/tbb/"))))
@@ -29716,7 +29854,15 @@ package provides a minimal R interface by relying on the Rcpp package.")
                  (lambda _
                    (display (string-append
                              "CXXFLAGS=-g -O2"
-                              " -Wno-error=changes-meaning\n"))))))))))
+                              " -Wno-error=changes-meaning\n")))))))
+          ;; This change lets us use GCC 13+.  We need to patch things here so
+          ;; that packages using RcppParallel to generate code can be compiled
+          ;; without errors.
+          (add-after 'install 'gcc-compatibility
+            (lambda _
+              (substitute* (string-append #$output "/site-library/RcppParallel/include/tbb/task.h")
+                (("task\\* next_offloaded")
+                 "tbb::task* next_offloaded")))))))
    (inputs (list tbb-2020))
    (native-inputs (list r-rcpp r-runit))
    (home-page "https://rcppcore.github.io/RcppParallel/")
@@ -32353,32 +32499,6 @@ the properties of models.  This is mainly for use by other package developers
 who want to include run-time testing features in their own packages.")
    (license license:gpl3+)))

-(define-public r-assertive-reflection
-  (package
-    (name "r-assertive-reflection")
-    (version "0.0-5")
-    (source
-     (origin
-       (method url-fetch)
-       (uri (cran-uri "assertive.reflection" version))
-       (sha256
-        (base32
-         "1g9lpwzy6r2xmyi2mlbcccnfgyzhzbmx5bsicf3vkffxrlkrpjn2"))))
-    (properties
-     `((upstream-name . "assertive.reflection")))
-    (build-system r-build-system)
-    (propagated-inputs
-     (list r-assertive-base))
-    (native-inputs (list r-testthat))
-    (home-page "https://bitbucket.org/richierocks/assertive.reflection")
-    (synopsis "Assertions for checking the state of R")
-    (description
-     "This package provides a set of predicates and assertions for checking
-the state and capabilities of R, the operating system it is running on, and
-the IDE being used.  This is mainly for use by other package developers who
-want to include run-time testing features in their own packages.")
-    (license license:gpl3+)))
-
 (define-public r-assertive-types
  (package
    (name "r-assertive-types")
@@ -32592,45 +32712,6 @@ for use by other package developers who want to include run-time testing
 features in their own packages.")
    (license license:gpl3+)))

-(define-public r-assertive
-  (package
-    (name "r-assertive")
-    (version "0.3-6")
-    (source
-     (origin
-       (method url-fetch)
-       (uri (cran-uri "assertive" version))
-       (sha256
-        (base32
-         "02palil82idqhhshcdjsfsja9qkqnd0dczqzj5gbccy4hfg1c0y4"))))
-    (build-system r-build-system)
-    (propagated-inputs
-     (list r-assertive-base
-           r-assertive-code
-           r-assertive-data
-           r-assertive-data-uk
-           r-assertive-data-us
-           r-assertive-datetimes
-           r-assertive-files
-           r-assertive-matrices
-           r-assertive-models
-           r-assertive-numbers
-           r-assertive-properties
-           r-assertive-reflection
-           r-assertive-sets
-           r-assertive-strings
-           r-assertive-types
-           r-knitr))
-    (native-inputs
-     (list r-knitr r-testthat))
-    (home-page "https://bitbucket.org/richierocks/assertive")
-    (synopsis "Readable check functions to ensure code integrity")
-    (description
-     "This package provides lots of predicates (@code{is_*} functions) to
-check the state of your variables, and assertions (@code{assert_*} functions)
-to throw errors if they aren't in the right form.")
-    (license license:gpl3+)))
-
 (define-public r-dotcall64
  (package
    (name "r-dotcall64")
@@ -33017,7 +33098,21 @@ putative directions).")
    (build-system r-build-system)
    ;; FIXME: Error in genomePartition(reader, ref) : pCoords: begin must be
    ;; <= end!
-    (arguments (list #:tests? #false))
+    (arguments
+     (list
+      #:tests? #false
+      #:phases
+      #~(modify-phases %standard-phases
+          (add-before 'install 'fix-r-4.5.0
+            ;; Changes in R 4.5.0: C-Level Facilities.
+            ;; Strict R headers are now the default. This removes the legacy
+            ;; definitions of PI, Calloc, Realloc and Free: use M_PI,
+            ;; R_Calloc, R_Realloc or R_Free instead.
+            ;; https://cran.r-project.org/doc/manuals/r-release/NEWS.html
+            (lambda _
+              (substitute* '("src/gapSiteList.h" "src/gapSiteListList.h")
+                (("Calloc") "R_Calloc")
+                (("Free") "R_Free")))))))
    (inputs (list zlib))
    (propagated-inputs
     (list r-refgenome))
@@ -35833,6 +35928,20 @@ lines.  It includes maximum likelihood and Bayesian tools.")
        (base32
         "0c4svyfd7xjx9k6pl40l7y9rc67zschs0nz1l386xi1m7arsp44n"))))
    (build-system r-build-system)
+    (arguments
+     (list
+      #:phases
+      #~(modify-phases %standard-phases
+          (add-before 'install 'fix-r-4.5.0
+            ;; Changes in R 4.5.0: C-Level Facilities.
+            ;; Strict R headers are now the default. This removes the legacy
+            ;; definitions of PI, Calloc, Realloc and Free: use M_PI,
+            ;; R_Calloc, R_Realloc or R_Free instead.
+            ;; https://cran.r-project.org/doc/manuals/r-release/NEWS.html
+            (lambda _
+              (substitute* "src/lsConstrain.c"
+                (("Calloc") "R_Calloc")
+                (("Free") "R_Free")))))))
    (home-page "https://www.mayo.edu/research/labs/\
 statistical-genetics-genetic-epidemiology/software")
    (synopsis "Regression methods for IBD linkage with covariates")
@@ -38068,7 +38177,7 @@ provided.")
     `((upstream-name . "XML")))
    (build-system r-build-system)
    (inputs
-     (list libxml2 zlib))
+     (list libxml2-with-zlib zlib))
    (native-inputs
     (list pkg-config))
    (home-page "https://www.omegahat.net/RSXML")
@@ -39633,8 +39742,8 @@ integrative non-negative matrix factorization to identify shared and
 dataset-specific factors.")
    (license license:gpl3)))

-(define-public r-liger
-  (deprecated-package "r-liger" r-rliger))
+(define-deprecated-package r-liger
+  r-rliger)

 (define-public r-harmony
  (package
@@ -41856,53 +41965,6 @@ floating point chromosomes.")
 forest) is fit on the kernel matrix of a subset of the training data.")
    (license license:gpl2+)))

-(define-public r-duckdb
-  (package
-    (name "r-duckdb")
-    (version "1.2.2")
-    (source
-     (origin
-       (method url-fetch)
-       (uri (cran-uri "duckdb" version))
-       (sha256
-        (base32 "161zxianyssvsrd2345v4bi1m2z7wj614z8343jb73vhlk6s9yyi"))
-       ;; This package bundles the duckdb sources and builds a custom variant
-       ;; of duckdb.  I'd be happy to link it with our duckdb library instead,
-       ;; but it does not seem possible to do that.
-       #;
-       (snippet
-        '(delete-file "src/duckdb.tar.xz"))))
-    (properties
-     '((upstream-name . "duckdb")
-       (updater-extra-native-inputs . ("tzdata-for-tests"))
-       ;; We don't seem to need this and I don't want to package it now.
-       (updater-ignored-native-inputs . ("r-dblog"))))
-    (build-system r-build-system)
-    (arguments (list #:tests? #false)) ;tests can time out on the build farm
-    (propagated-inputs (list r-dbi))
-    (native-inputs (list r-adbcdrivermanager
-                         r-arrow
-                         r-bit64
-                         r-callr
-                         r-clock
-                         r-dbitest
-                         r-dbplyr
-                         r-dplyr
-                         r-remotes
-                         r-rlang
-                         r-testthat
-                         r-tibble
-                         r-vctrs
-                         r-withr
-                         tzdata-for-tests))
-    (home-page "https://r.duckdb.org/")
-    (synopsis "DBI package for the DuckDB database management system")
-    (description
-     "The DuckDB project is an embedded analytical data management system with
-support for the Structured Query Language (SQL).  This package includes all of
-DuckDB and an R Database Interface (DBI) connector.")
-    (license license:expat)))
-
 (define-public r-dummies
  (package
    (name "r-dummies")
@@ -43039,13 +43101,13 @@ It also provides a small number of bug fixes to the original code.")
 (define-public r-torch
  (package
    (name "r-torch")
-    (version "0.14.2")
+    (version "0.16.3")
    (source
     (origin
       (method url-fetch)
       (uri (cran-uri "torch" version))
       (sha256
-        (base32 "1j0wgxr25h91c7x48svmgd0pbjl2ljn8rv6rsgw5a56vdgr992nb"))))
+        (base32 "0gqjg9qhsrwh5cvdlk6lyqp2j1d3kr49im3m2ja4c3wkjpk9swhv"))))
    (properties
     '((upstream-name . "torch")
       (updater-ignored-native-inputs . ("r-aten"))
@@ -43072,8 +43134,7 @@ It also provides a small number of bug fixes to the original code.")
                    inputs "/lib/liblantern.so")
                   (string-append deps "/liblantern.so")))))))))
    (inputs
-     (list python-pytorch-for-r-torch
-           liblantern))
+     (list liblantern python-pytorch-for-r-torch))
    (propagated-inputs
     (list r-bit64
           r-callr
@@ -45565,7 +45626,13 @@ techniques to average Bayesian predictive distributions.")
             (setenv "TZ" "UTC+1")
             (setenv "TZDIR"
                     (search-input-directory inputs
-                                             "share/zoneinfo")))))))
+                                             "share/zoneinfo"))))
+         (add-before 'install 'relax-gcc-14-strictness
+            (lambda _
+              (substitute* "src/Makevars"
+                (("CXX_STD = CXX17")
+                 "CXX_STD = CXX17
+PKG_CXXFLAGS+=-g -O2 -Wno-error=changes-meaning")))))))
    (native-inputs
     (list r-knitr
           r-matrix
@@ -46472,6 +46539,19 @@ download images.")
    (arguments
     `(#:phases
       (modify-phases %standard-phases
+         (add-after 'unpack 'relax-gcc-14-strictness
+            (lambda _
+              ;; XXX FIXME: $HOME/.R/Makevars seems to be the only way to
+              ;; set custom CFLAGS for R?
+              (setenv "HOME" (getcwd))
+              (mkdir-p ".R")
+              (with-directory-excursion ".R"
+                (with-output-to-file "Makevars"
+                  (lambda _
+                    (display (string-append
+                              "CFLAGS=-g -O2"
+                              " -std=gnu11"
+                              " -Wno-error=implicit-function-declaration\n")))))))
         (add-before 'install 'install-server-binary
           ;; Makevars tries to install to R's store directory.
           (lambda* (#:key outputs #:allow-other-keys)
@@ -47742,40 +47822,6 @@ user-level code from spatstat which performs geometrical operations, except
 for the geometry of linear networks.")
    (license license:gpl2+)))

-(define-public r-spatstat-core
-  (package
-    (name "r-spatstat-core")
-    (version "2.4-4")
-    (source
-     (origin
-       (method url-fetch)
-       (uri (cran-uri "spatstat.core" version))
-       (sha256
-        (base32
-         "0fyi8y1z919nzn47kaviln7gflhcp5qdi3gfvf7nwkdix3pkk373"))))
-    (properties `((upstream-name . "spatstat.core")))
-    (build-system r-build-system)
-    (propagated-inputs
-     (list r-abind
-           r-goftest
-           r-matrix
-           r-mgcv
-           r-nlme
-           r-rpart
-           r-spatstat-data
-           r-spatstat-geom
-           r-spatstat-random
-           r-spatstat-sparse
-           r-spatstat-utils
-           r-tensor))
-    (native-inputs (list r-spatstat-model))
-    (home-page "https://spatstat.org/")
-    (synopsis "Core functionality of the spatstat package")
-    (description
-     "This is a subset of the original spatstat package, containing all of the
-user-level code from spatstat, except for the code for linear networks.")
-    (license license:gpl2+)))
-
 (define-public r-spatstat-linnet
  (package
    (name "r-spatstat-linnet")
@@ -48048,6 +48094,22 @@ importance measure as introduced in Kursa (2014)
             (base32
              "05x9wgzsmx4vb12lmcspymgmpb2xw8bwryb8ysg7vzg2nkh0ma3g"))))
   (build-system r-build-system)
+   (arguments
+    (list
+     #:phases
+     '(modify-phases %standard-phases
+        (add-before 'install 'fix-r-4.5.0
+          ;; Changes in R 4.5.0: C-Level Facilities.
+          ;; Strict R headers are now the default. This removes the legacy
+          ;; definitions of PI, Calloc, Realloc and Free: use M_PI,
+          ;; R_Calloc, R_Realloc or R_Free instead.
+          ;; https://cran.r-project.org/doc/manuals/r-release/NEWS.html
+          (lambda _
+            (substitute* '("src/featContrib.c"
+                           "src/featContribClass.c"
+                           "src/forest.c")
+              (("Calloc") "R_Calloc")
+              (("Free") "R_Free")))))))
   (propagated-inputs
    (list r-randomforest))
   (home-page "https://r-forge.r-project.org/projects/rffc/")
@@ -50195,8 +50257,8 @@ other R users.")
    (license license:gpl3)))

 ;; This is for r-seurat5
-(define-public r-seurat5object
-  (deprecated-package "r-seurat5object" r-seuratobject))
+(define-deprecated-package r-seurat5object
+  r-seuratobject)

 (define-public r-seurat
  (package
@@ -50276,8 +50338,8 @@ discovery of differentially expressed genes and markers.")

 ;; Seurat5 is only available via the seurat5 branch.  It will replace r-seurat
 ;; eventually once it has been released to CRAN.
-(define-public r-seurat5
-  (deprecated-package "r-seurat5" r-seurat))
+(define-deprecated-package r-seurat5
+  r-seurat)

 (define-public r-seuratdisk
  (let ((commit "877d4e18ab38c686f5db54f8cd290274ccdbe295")
@@ -50482,6 +50544,20 @@ parabolic or user defined by custom scale factors.")
            "036cv56wf42q2p3d5h15hbrp5rc29xxy20qwv4k1qzhkq6hmw0qs"))))
    (properties `((upstream-name . "decon")))
    (build-system r-build-system)
+    (arguments
+     (list
+      #:phases
+      #~(modify-phases %standard-phases
+          (add-before 'install 'fix-r-4.5.0
+            ;; Changes in R 4.5.0: C-Level Facilities.
+            ;; Strict R headers are now the default. This removes the legacy
+            ;; definitions of PI, Calloc, Realloc and Free: use M_PI,
+            ;; R_Calloc, R_Realloc or R_Free instead.
+            ;; https://cran.r-project.org/doc/manuals/r-release/NEWS.html
+            (lambda _
+              (substitute* "src/Ckernel.c"
+                (("pow\\(PI") "pow(M_PI")
+                (("fint/PI") "fint/M_PI")))))))
    (native-inputs
     (list gfortran))
    (home-page
@@ -50518,6 +50594,17 @@ Journal of Statistical Software, 39(10), 1-24.")
        (base32 "0ydnjyprv8fz037nkfvjd8w6hg4a19lbnq4kl7yankxksjfdyqc3"))))
    (properties `((upstream-name . "densEstBayes")))
    (build-system r-build-system)
+    (arguments
+     (list
+      #:phases
+      #~(modify-phases %standard-phases
+          (add-after 'unpack 'relax-gcc-14-strictness
+            (lambda _
+              (substitute* "configure"
+                ;; Modifying src/Makevars directly is overruled.
+                (("src/Makevars")
+                 "src/Makevars
+echo \"PKG_CXXFLAGS+=-g -O2 -Wno-error=changes-meaning\" >> src/Makevars")))))))
    (propagated-inputs
     (list r-bh
           r-mass
@@ -51536,18 +51623,16 @@ avoid system fonts to make sure your outputs are reproducible.")
                    "--without-harfbuzz")))))
       ("static-harfbuzz"
        ,(package
-           (inherit (static-package harfbuzz))
+           (inherit harfbuzz)
           (arguments
            `(#:tests? #false ; fail because shared library is disabled
              #:configure-flags
-              (list "--enable-static=yes"
-		    "--enable-shared=no"
-		    "--with-pic=yes"
-		    "--with-freetype=yes"
-		    "--without-icu"
-		    "--without-cairo"
-		    "--without-fontconfig"
-		    "--without-glib")))))))
+              (list "--default-library=static"
+                   "--default-both-libraries=static"
+                   "-Dfreetype=enabled"
+                   "-Dicu=disabled"
+                   "-Dcairo=disabled"
+                   "-Dglib=disabled")))))))
    (inputs
     (list zlib))
    (home-page "https://cran.r-project.org/package=freetypeharfbuzz")
@@ -1367,13 +1367,13 @@ API.")
    (home-page "https://matrix.org/docs/projects/other/olm/")
    (license license:asl2.0)))

-(define-public libolm
-  (deprecated-package "libolm" olm))
+(define-deprecated-package libolm
+  olm)

 (define-public python-olm
  (package
-    ;; python-olm is part of libolm and must be updated at the same time.
-    (inherit libolm)
+    ;; python-olm is part of olm and must be updated at the same time.
+    (inherit olm)
    (name "python-olm")
    (build-system python-build-system)
    (arguments
@@ -1390,7 +1390,7 @@ API.")
             (when tests?
               (add-installed-pythonpath inputs outputs)
               (invoke "pytest")))))))
-    (inputs (list libolm))
+    (inputs (list olm))
    (propagated-inputs
     (list python-cffi python-future))
    (native-inputs
@@ -179,7 +179,8 @@ tunneling, and so on.")
    (license (license:non-copyleft "file://COPYING"
                                   "See COPYING in the distribution."))))

-(define-public gnurl (deprecated-package "gnurl" curl))
+(define-deprecated-package gnurl
+  curl)

 (define-public curl-ssh
  (package/inherit curl
@@ -432,7 +433,7 @@ sugar and output formatting inspired from @code{httpie}.")
 (define-public trurl
  (package
    (name "trurl")
-    (version "0.9")
+    (version "0.16.1")
    (source
     (origin
       (method git-fetch)
@@ -441,7 +442,7 @@ sugar and output formatting inspired from @code{httpie}.")
             (commit (string-append name "-" version))))
       (file-name (git-file-name name version))
       (sha256
-        (base32 "10gsl0fdpybfcffmgf3qww7cpw3ifczl601042a2mqmwwrlx5zj7"))))
+        (base32 "1zdq81smm9ddqcmvwpcm01nf812fr8p4g6i2raxv3s0rd3hi68sl"))))
    (build-system gnu-build-system)
    (arguments
     (list
@@ -451,7 +452,7 @@ sugar and output formatting inspired from @code{httpie}.")
      #:phases
      #~(modify-phases %standard-phases
          (delete 'configure))))
-    (native-inputs (list python))
+    (native-inputs (list python-minimal perl))
    (inputs (list curl))
    (home-page "https://curl.se/trurl/")
    (synopsis "Command line tool for URL parsing and manipulation")
@@ -110,7 +110,7 @@ Refresh}in-DRAM mitigations effectively and as such can trigger bit flips.")
 (define-public gallia
  (package
    (name "gallia")
-    (version "1.9.0")
+    (version "2.0.0b2")
    (source
     (origin
       (method git-fetch)
@@ -119,10 +119,11 @@ Refresh}in-DRAM mitigations effectively and as such can trigger bit flips.")
              (commit (string-append "v" version))))
       (file-name (git-file-name name version))
       (sha256
-        (base32 "11pyq2jn0py6n4xi5yxbsazybbdn9m8fgllqmfrsiqg9k96i6cwb"))))
+        (base32 "0bf9zq89dcnnm8ir322l69assrhxrspa97m7yk153q0vv9vib6q9"))))
    (build-system pyproject-build-system)
    (arguments
     (list
+      #:build-backend "poetry.core.masonry.api" ;XXX: python-uv-build is required
      ;; NOTE: Test steps are sourced from GitHub Actions attached to the
      ;; project. This is a minimal test suite, more precise tests require
      ;; setting up local service with Bats (Bash Automated Testing System)
@@ -128,6 +128,7 @@
  #:use-module (gnu packages language)
  #:use-module (gnu packages libedit)
  #:use-module (gnu packages libevent)
+  #:use-module (gnu packages libffi)
  #:use-module (gnu packages linux)
  #:use-module (gnu packages lisp)
  #:use-module (gnu packages lisp-xyz)
@@ -205,39 +206,6 @@
  #:use-module (srfi srfi-26)
  #:use-module (ice-9 match))

-(define-public duckdb
-  (package
-    (name "duckdb")
-    (version "1.3.2")
-    (source
-     (origin
-       (method git-fetch)
-       (uri (git-reference
-             (url "https://github.com/duckdb/duckdb")
-             (commit (string-append "v" version))))
-       (file-name (git-file-name name version))
-       (sha256
-        (base32 "1dg3g66az17z4snxxw7cslqdkrvbx2nnyry73yi77yp0vpri1lz8"))))
-    (arguments
-     (list
-      #:tests? #f
-      #:configure-flags
-      #~(list "-DBUILD_EXTENSIONS=autocomplete;icu;json;parquet;tpch;"
-              ;; There is no git checkout from which to read the version tag.
-              (string-append "-DOVERRIDE_GIT_DESCRIBE="
-                             "v" #$version "-0-g0123456789"))))
-    (build-system cmake-build-system)
-    (home-page "https://duckdb.org")
-    (synopsis "In-process SQL OLAP database management system")
-    (description "CLI and C/C++ source libraries for DuckDB, a relational
-(table-oriented) @acronym{DBMS, Database Management System} that supports
-@acronym{SQL, Structured Query Language}, contains a columnar-vectorized query
-execution engine, and provides transactional @acronym{ACID, Atomicity
-Consistency Isolation and Durability} guarantees via bulk-optimized
-@acronym{MVCC, Multi-Version Concurrency Control}.  Data can be stored in
-persistent, single-file databases with support for secondary indexes.")
-    (license license:expat)))
-
 (define-public ephemeralpg
  (package
    (name "ephemeralpg")
@@ -828,7 +796,7 @@ the API, and provides features such as:
      #:tests? #f
      #:build-backend "setuptools.build_meta"))
    (native-inputs
-     (list python-cython-3
+     (list python-cython
           python-setuptools
           python-wheel))
    (propagated-inputs
@@ -877,6 +845,30 @@ they exist.")
 client.")
    (license license:asl2.0)))

+(define-public python-psycopg2cffi
+  (package
+    (name "python-psycopg2cffi")
+    (version "2.9.0")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (pypi-uri "psycopg2cffi" version))
+       (sha256
+        (base32 "0ljwsglgjm0c28dzlqlyvbz1jnn4hpmqa8dn28fkmpipv3f2w9vy"))))
+    (build-system pyproject-build-system)
+    ;; TODO: Fix tests: ImportError: cannot import name 'psycopg2_tests' from
+    ;; partially initialized module 'psycopg2cffi.tests' (most likely due to a
+    ;; circular import)
+    (arguments '(#:tests? #f))
+    (propagated-inputs (list python-cffi
+                             python-six)) ;; hard dependency
+    (native-inputs (list python-setuptools postgresql))
+    (home-page "https://github.com/chtd/psycopg2cffi")
+    (synopsis "Port of psycopg2 to CFFI")
+    (description
+     "This package is an implementation of @code{psycopg2} using CFFI.")
+    (license license:lgpl3)))
+
 (define-public python-pylibmc
  (package
    (name "python-pylibmc")
@@ -1042,25 +1034,32 @@ autocompletion and syntax highlighting.")
 (define-public mycli
  (package
    (name "mycli")
-    (version "1.25.0")
+    (version "1.37.1")
    (source
     (origin
       (method url-fetch)
       (uri (pypi-uri "mycli" version))
       (sha256
-        (base32 "0231v7f6q84mjmi1h0ni3s55m2g8p5d7x5q49bgkxlaz2bc2xwgy"))))
-    (build-system python-build-system)
+        (base32 "03kvw0n6s3f06whr7prjfwp1arl66mahlxizv27i9dkm5ibv1qrz"))))
+    (build-system pyproject-build-system)
    (arguments
     '(#:tests? #f))                    ; tests expect a running MySQL
+    (native-inputs
+     (list python-setuptools
+           python-setuptools-scm))
    (propagated-inputs
     (list python-cli-helpers
-           python-click
+           python-click-7
           python-configobj
+           python-cryptography
           python-prompt-toolkit
           python-pyaes
+           python-pyfzf
           python-pygments
           python-pymysql
           python-pyperclip
+           python-sqlglot
+           python-sqlglotrs
           python-sqlparse))
    (home-page "https://www.mycli.net")
    (synopsis
@@ -2085,8 +2084,8 @@ supports editing, navigation, and querying of recutils database files
 including field and record folding.")
    (license license:gpl3+)))

-(define-public emacs-recutils
-  (deprecated-package "emacs-recutils" emacs-rec-mode))
+(define-deprecated-package emacs-recutils
+  emacs-rec-mode)

 (define-public rocksdb
  (package
@@ -3711,25 +3710,6 @@ streamlined for its use in the context of tortoise-orm.  It removes support
 for many database kinds that tortoise-orm doesn't need, for example.")
    (license license:asl2.0)))

-(define-public python-sphinxcontrib-asyncio
-  (package
-    (name "python-sphinxcontrib-asyncio")
-    (version "0.3.0")
-    (source
-      (origin
-        (method url-fetch)
-        (uri (pypi-uri "sphinxcontrib-asyncio" version))
-        (sha256
-          (base32 "0bkj010ygsr7m769llf2aq4bbjfhdwqrrabi98j8gpvyzvh2dzcr"))))
-    (build-system python-build-system)
-    (arguments '(#:tests? #f))          ;no test suite
-    (propagated-inputs (list python-sphinx))
-    (home-page "https://github.com/aio-libs/sphinxcontrib-asyncio")
-    (synopsis "Sphinx extension to support coroutines in markup")
-    (description "This package is a Sphinx extension providing additional
-coroutine-specific markup.")
-    (license license:asl2.0)))
-
 (define-public python-asyncpg
  (package
    (name "python-asyncpg")
@@ -4772,7 +4752,7 @@ with the @code{psycopg} PostgreSQL driver.")
 	          (invoke "psql" "-h" dbdir "-d" "postgres"
                          "-c" "CREATE DATABASE nixbld;"))))))))
    (native-inputs
-     (list python-cython-3
+     (list python-cython
           python-mypy
           python-psycopg-pool
           python-pytest
@@ -5038,8 +5018,8 @@ reasonable substitute.")
     "This package provides a Python interface to the Redis key-value store.")
    (license license:expat)))

-(define-public python-aioredis
-  (deprecated-package "python-aioredis" python-redis))
+(define-deprecated-package python-aioredis
+  python-redis)

 (define-public python-rq
  (package
@@ -5582,7 +5562,7 @@ __version_tuple__ = version_tuple = (~a)~%" version version-tuple))))))
    (native-inputs
     (list cmake ;needs 3.25
           pkg-config
-           python-cython-3
+           python-cython
           python-pytest
           python-pytest-runner
           python-setuptools-scm))
@@ -5955,7 +5935,7 @@ a Gtk.Grid Widget.")
                   "-DFORCE_INTERNAL_QHEXEDIT=OFF"
                   "-DENABLE_TESTING=ON")))
    (inputs
-     (list qcustomplot
+     (list qcustomplot-qt5
           qhexedit
           qscintilla
           qtbase-5
@@ -6149,16 +6129,16 @@ mechanism of @code{dogpile}.")
 (define-public datasette
  (package
    (name "datasette")
-    (version "1.0a16")
-    (source (origin
-              (method git-fetch)        ;for tests
-              (uri (git-reference
-                    (url "https://github.com/simonw/datasette")
-                    (commit version)))
-              (file-name (git-file-name name version))
-              (sha256
-               (base32
-                "10c754idn9ka5hhai1qwjwlxw4dajdlrh162k71i5gwn4cgq6wr5"))))
+    (version "1.0a19")
+    (source
+     (origin
+       (method git-fetch)
+       (uri (git-reference
+              (url "https://github.com/simonw/datasette")
+              (commit version)))
+       (file-name (git-file-name name version))
+       (sha256
+        (base32 "0wb73iksrc5vg2lnq3q4vr7yhlzxwr711jfmjdndd0s77996zsfh"))))
    (build-system pyproject-build-system)
    (arguments
     (list
@@ -6168,7 +6148,14 @@ mechanism of @code{dogpile}.")
                    ;; These contain two unexpected extra items.
                    "not test_searchable"
                    " and not test_searchmode")
-              "-n" (number->string (parallel-job-count)))))
+              "--ignore=tests/test_black.py"
+              "-n" (number->string (parallel-job-count)))
+      #:phases
+      #~(modify-phases %standard-phases
+          (add-after 'unpack 'relax-requirements
+            (lambda _
+              (substitute* "setup.py"
+                (("\"pip\",") "")))))))
    (propagated-inputs
     (list python-aiofiles
           python-asgi-csrf
@@ -6190,17 +6177,14 @@ mechanism of @code{dogpile}.")
    (native-inputs
     (list nss-certs-for-test
           python-beautifulsoup4
-           python-black
           python-cogapp
-           python-pip
           python-pytest
-           python-pytest-asyncio
+           python-pytest-asyncio-0.26
           python-pytest-runner
           python-pytest-timeout
           python-pytest-xdist
           python-setuptools
-           python-trustme
-           python-wheel))
+           python-trustme))
    (home-page "https://datasette.io/")
    (synopsis "Multi-tool for exploring and publishing data")
    (description "Datasette is a tool for exploring and publishing data.
@@ -148,7 +148,7 @@
                     (("rm (.*) configure") "")
                     (("chmod (.*) config.guess(.*)$") ""))
                   (invoke "sh" "s_config"))))))
-    (native-inputs (list autoconf automake-1.16.5 libtool))
+    (native-inputs (list autoconf-2.69 automake-1.16.5 libtool))
    (synopsis "Berkeley database")
    (description
     "Berkeley DB is an embeddable database allowing developers the choice of
@@ -533,7 +533,7 @@ server and embedded PowerPC, and S390 guests.")
  (package
    (inherit american-fuzzy-lop)
    (name "aflplusplus")
-    (version "4.33c")
+    (version "4.34c")
    (source (origin
              (method git-fetch)
              (uri (git-reference
@@ -542,7 +542,7 @@ server and embedded PowerPC, and S390 guests.")
              (file-name (git-file-name name version))
              (sha256
               (base32
-                "1h4ya82s1wd11c04r0g0wsq56asl1np3nmsf6yk4vyic9nm0hsq0"))))
+                "14pllv986zwzbqarbsif02k618yns4fvqd3br6irzfcwivpysqfa"))))
    (arguments
     (substitute-keyword-arguments (package-arguments american-fuzzy-lop)
       ((#:make-flags _ ''())
@@ -686,6 +686,7 @@ conditions.")
        (base32
         "1mpzjaksc2qg2hzqflf39pl06p53qam2dn3hkhkcv6p00d2n4kx3"))))
    (build-system gnu-build-system)
+    (native-inputs (list gcc-13))
    (home-page "https://github.com/samhocevar/zzuf")
    (synopsis "Transparent application input fuzzer")
    (description "Zzuf is a transparent application input fuzzer.  It works by
@@ -35,14 +35,14 @@
 (define-public dezyne
  (package
    (name "dezyne")
-    (version "2.19.1")
+    (version "2.19.2")
    (source
     (origin
       (method url-fetch)
       (uri (string-append "https://dezyne.org/download/dezyne/"
                           name "-" version ".tar.gz"))
       (sha256
-        (base32 "17gpzmkafql2d3kj2yx293hgrh3l6zhjk63wcirqr7xsxjhava5n"))))
+        (base32 "142ng6aq7lcp0jk16yajf2bpm03db9q1wbxs5igwnvszy6aqq243"))))
    (inputs (list bash-minimal
                  boost
                  guile-3.0
@@ -14,6 +14,7 @@
 ;;; Copyright © 2022 Maxim Cournoyer <maxim@guixotic.coop>
 ;;; Copyright © 2025 Artyom V. Poptsov <poptsov.artyom@gmail.com>
 ;;; Copyright © 2025 Zhu Zihao <all_but_last@163.com>
+;;; Copyright © 2025 Nigko Yerden <nigko.yerden@gmail.com>
 ;;;
 ;;; This file is part of GNU Guix.
 ;;;
@@ -36,20 +37,24 @@
  #:use-module (guix gexp)
  #:use-module (guix download)
  #:use-module (guix git-download)
-  #:use-module (guix build-system gnu)
-  #:use-module (guix build-system python)
-  #:use-module (guix build-system trivial)
-  #:use-module (guix build-system copy)
  #:use-module (guix build-system cmake)
+  #:use-module (guix build-system copy)
+  #:use-module (guix build-system gnu)
+  #:use-module (guix build-system pyproject)
+  #:use-module (guix build-system python)
+  #:use-module (guix build-system qt)
+  #:use-module (guix build-system trivial)
  #:use-module (gnu packages)
  #:use-module (gnu packages autotools)
  #:use-module (gnu packages base)
  #:use-module (gnu packages bash)
  #:use-module (gnu packages bison)
+  #:use-module (gnu packages check)
  #:use-module (gnu packages compression)
-  #:use-module (gnu packages compression)
+  #:use-module (gnu packages cpp)
  #:use-module (gnu packages crypto)
  #:use-module (gnu packages curl)
+  #:use-module (gnu packages education)
  #:use-module (gnu packages emacs)
  #:use-module (gnu packages flex)
  #:use-module (gnu packages fribidi)
@@ -58,6 +63,7 @@
  #:use-module (gnu packages groff)
  #:use-module (gnu packages gsasl)
  #:use-module (gnu packages guile)
+  #:use-module (gnu packages hunspell)
  #:use-module (gnu packages icu4c)
  #:use-module (gnu packages linux)
  #:use-module (gnu packages m4)
@@ -65,15 +71,55 @@
  #:use-module (gnu packages pcre)
  #:use-module (gnu packages perl)
  #:use-module (gnu packages pkg-config)
+  #:use-module (gnu packages pretty-print)
  #:use-module (gnu packages python)
+  #:use-module (gnu packages python-build)
+  #:use-module (gnu packages qt)
  #:use-module (gnu packages readline)
+  #:use-module (gnu packages search)
  #:use-module (gnu packages speech)
  #:use-module (gnu packages tcl)
  #:use-module (gnu packages texinfo)
  #:use-module (gnu packages textutils)
+  #:use-module (gnu packages video)
  #:use-module (gnu packages web)
  #:use-module (gnu packages wordnet)
-  #:use-module (gnu packages xml))
+  #:use-module (gnu packages xiph)
+  #:use-module (gnu packages xml)
+  #:use-module (gnu packages xorg))
+
+(define-public cmudict
+  (package
+    (name "cmudict")
+    (properties '((commit . "0f8072f814306c5ee4fbf992ed853601b12c01f9")
+                  (revision . "0")))
+    (version (git-version "0"
+                          (assoc-ref properties 'revision)
+                          (assoc-ref properties 'commit)))
+    (source
+     (origin
+       (method git-fetch)
+       (uri (git-reference
+              (url "https://github.com/cmusphinx/cmudict")
+              (commit (assoc-ref properties 'commit))))
+       (file-name (git-file-name name version))
+       (sha256
+        (base32 "0ri9r9ljbwv282lmv9cp3gmbwlanf99nhzvw83fjf12bc4nxl0qd"))))
+    (build-system copy-build-system)
+    (arguments
+     (list
+      #:phases
+      #~(modify-phases %standard-phases
+          (delete 'install-license-files))))
+    (home-page "https://github.com/cmusphinx/cmudict")
+    (synopsis "Pronouncing English dictionary")
+    (description
+     "CMUdict (the Carnegie Mellon Pronouncing Dictionary) is a free
+pronouncing dictionary of English, suitable for uses in speech technology and
+is maintained by the Speech Group in the School of Computer Science at
+Carnegie Mellon University.")
+    (license (license:fsdg-compatible
+              "https://github.com/cmusphinx/cmudict/blob/master/LICENSE"))))

 (define-public dico
  (package
@@ -746,3 +792,112 @@ Guix package is installed.")
 and export them to any format and application.")
      (home-page "https://freedict.org")
      (license license:gpl2+))))
+
+(define-public python-cmudict
+  (package
+    (name "python-cmudict")
+    (version "1.1.1")
+    (source
+     (origin
+       (method git-fetch)
+       (uri (git-reference
+              (url "https://github.com/prosegrinder/python-cmudict")
+              (commit (string-append "v" version))))
+       (file-name (git-file-name name version))
+       (sha256
+        (base32 "0ia9flqchgr975zjc9l1p379sglg9b56q9m09n05sag8368409k4"))))
+    (build-system pyproject-build-system)
+    (arguments
+     (list
+      #:phases
+      #~(modify-phases %standard-phases
+          (add-after 'unpack 'relax-requirements
+            (lambda _
+              (substitute* "pyproject.toml"
+                ((".*importlib-resources.*")
+                 ""))))
+          (add-after 'ensure-no-mtimes-pre-1980 'inject-data
+            (lambda* (#:key inputs #:allow-other-keys)
+              (let ((cmudict (search-input-file inputs "cmudict.dict")))
+                (rmdir "src/cmudict/data")
+                (copy-recursively (dirname cmudict) "src/cmudict/data"))))
+          (add-after 'install 'replace-by-symlink
+            (lambda* (#:key inputs outputs #:allow-other-keys)
+              (let ((cmudict (search-input-file inputs "cmudict.dict"))
+                    (target (string-append (site-packages inputs outputs)
+                                           "/cmudict/data")))
+                (delete-file-recursively target)
+                (symlink (dirname cmudict) target)))))))
+    (native-inputs (list python-poetry-core python-pytest python-setuptools))
+    (inputs (list cmudict))
+    (home-page "https://github.com/prosegrinder/python-cmudict")
+    (synopsis "Python wrapper for The CMU Pronouncing Dictionary data files")
+    (description
+     "This package provides a versioned python wrapper package for The CMU
+Pronouncing Dictionary data files.")
+    (license license:gpl3+)))
+
+(define-public goldendict-ng
+  (let ((commit "2cfc27361d061103a164705e7f85dbdf6cd6056f")
+        (revision "0"))
+    (package
+      (name "goldendict-ng")
+      (version (git-version "25.10.0" revision commit))
+      (source
+       (origin
+         (method git-fetch)
+         (uri (git-reference
+                (url "https://github.com/xiaoyifang/goldendict-ng")
+                (commit commit)))
+         (file-name (git-file-name name version))
+         (sha256
+          (base32 "0r3aykiwg1jxam72mn1yrgmndnbf0r6nz5l1brqyqbr4wq3ir0p2"))
+         (modules '((guix build utils)))
+         (snippet #~(for-each delete-file-recursively
+                              (list "thirdparty/eb"
+                                    "thirdparty/fmt"
+                                    "thirdparty/tomlplusplus")))))
+      (build-system qt-build-system)
+      (arguments
+       (list #:qtbase qtbase
+             #:configure-flags
+             #~(list
+                ;; use system fmt and toml++ instead of the bundled ones
+                "-DUSE_SYSTEM_FMT=ON"
+                "-DUSE_SYSTEM_TOML=ON")
+             ;; no tests
+             #:tests? #f))
+      (native-inputs (list pkg-config qttools))
+      (inputs (list `(,zstd "lib")
+                    bzip2
+                    ffmpeg
+                    fmt
+                    hunspell
+                    icu4c
+                    libeb
+                    libvorbis
+                    libx11
+                    libxtst
+                    libzim
+                    lzo
+                    opencc
+                    qt5compat
+                    qtmultimedia
+                    qtsvg
+                    qtwebchannel
+                    qtwebengine
+                    tomlplusplus
+                    xapian
+                    xz
+                    zlib))
+      (synopsis "Advanced dictionary lookup program")
+      (description "GoldenDict-ng is an advanced dictionary lookup program
+that supports many dictionary formats, such as MDX, DSL, StarDict, Zim, etc.,
+as well as special types of \"dictionaries\", such as external program,
+website, audio files.  Among ather features are full text search,
+Anki integration, transliteration for some languages, word stemming and
+spelling correction via Hunspell's morphology analysis, unicode case,
+diacritics, punctuation and whitespace folding.  It is forked from the
+original GoldenDict which was developed at http://goldendict.org/.")
+      (home-page "https://xiaoyifang.github.io/goldendict-ng/")
+      (license license:gpl3+))))
@@ -35,6 +35,7 @@
  #:use-module (gnu packages compression)
  #:use-module (gnu packages cpio)
  #:use-module (gnu packages dbm)
+  #:use-module (gnu packages firmware)
  #:use-module (gnu packages gettext)
  #:use-module (gnu packages ghostscript)
  #:use-module (gnu packages gnome)
@@ -78,7 +79,7 @@
 (define-public diffoscope
  (package
    (name "diffoscope")
-    (version "306")
+    (version "308")
    (source
     (origin
       (method git-fetch)
@@ -87,7 +88,7 @@
             (commit version)))
       (file-name (git-file-name name version))
       (sha256
-        (base32 "1cakqyf6sg4g3y3ykagnk4p0wzk285cb6b864mrafbwjkdv6m32w"))))
+        (base32 "0g4kac0r2plhcl3drpihp2z99yfqlz36xvvfr4v6sn49zj103kny"))))
    (build-system pyproject-build-system)
    (arguments
     (list
@@ -267,7 +268,7 @@ install.")
 (define-public reprotest
  (package
    (name "reprotest")
-    (version "0.7.30")
+    (version "0.7.32")
    (source
     (origin
       (method git-fetch)
@@ -276,7 +277,7 @@ install.")
             (commit version)))
       (file-name (git-file-name name version))
       (sha256
-        (base32 "013mqbbh6dcia2i4qdi4270lcgzr0k879phsaydf9b5ng9fkdajl"))))
+        (base32 "0z67291rv9ii3llv2hwz9ak99818fwkxcqibb5zk8qkamh4y2bww"))))
    (build-system pyproject-build-system)
    (arguments
     (list
@@ -471,14 +471,14 @@ output without any plausibility checks.")
 (define-public gptfdisk
  (package
    (name "gptfdisk")
-    (version "1.0.9")
+    (version "1.0.10")
    (source
     (origin
      (method url-fetch)
      (uri (string-append "mirror://sourceforge/gptfdisk/gptfdisk/"
                          version "/gptfdisk-" version ".tar.gz"))
      (sha256
-       (base32 "1hjh5m77fmfq5m44yy61kchv7mbfgx026aw3jy5qxszsjckavzns"))))
+       (base32 "10m2jgb2m6r0m6snjh0lsxr7ljw0ic5l9h3ki54yrffjqqdxdgia"))))
    (build-system gnu-build-system)
    (arguments
     `(#:test-target "test"
@@ -1052,8 +1052,8 @@ a card with a smaller capacity than stated.")
    (description "This package provides @code{parted} bindings for Python.")
    (license license:gpl2+)))

-(define-public python-parted
-  (deprecated-package "python-parted" python-pyparted))
+(define-deprecated-package python-parted
+  python-pyparted)

 (define-public duperemove
  (package
@@ -203,13 +203,13 @@ your project into different processes.")
 (define-public python-django
  (package
    (name "python-django")
-    (version "5.2.6")
+    (version "5.2.8")
    (source
     (origin
       (method url-fetch)
       (uri (pypi-uri "django" version))
       (sha256
-        (base32 "0yx82k8iilz8l6wkdvjcrz75i144lf211xybrrrks6b34wvh0pns"))))
+        (base32 "0zvc8p4brwbj4yy8jxcannjfnik2xh4vis04c3x2r6mvlmk4h993"))))
    (build-system pyproject-build-system)
    (arguments
     '(#:test-flags
@@ -302,13 +302,13 @@ to the @dfn{don't repeat yourself} (DRY) principle.")
  (package
    (inherit python-django)
    (name "python-django-4")
-    (version "4.2.23")
+    (version "4.2.26")
    (source
      (origin
        (method url-fetch)
        (uri (pypi-uri "django" version))
        (sha256
-         (base32 "1r7sbhllc6d903di0ydqy737s28m223lgpk69y6xhjb4dsxfmza2"))))
+         (base32 "0ylxdpkiwdh8yhqxqzm90fxiagm8v7xijvdm5ha3ypmmpj3y964k"))))
    (arguments
     (substitute-keyword-arguments (package-arguments python-django)
       ((#:phases phases)
@@ -854,29 +854,6 @@ information about the current request and response as a toolbar on the
 rendered page.")
    (license license:bsd-3)))

-(define-public python-django-debug-toolbar-alchemy
-  (package
-    (name "python-django-debug-toolbar-alchemy")
-    (version "0.1.5")
-    (home-page "https://github.com/miki725/django-debug-toolbar-alchemy")
-    (source (origin
-              (method url-fetch)
-              (uri (pypi-uri "django-debug-toolbar-alchemy" version))
-              (sha256
-               (base32
-                "1kmpzghnsc247bc1dl22s4y62k9ijgy1pjms227018h5a4frsa5b"))))
-    (build-system python-build-system)
-    (arguments '(#:tests? #f))          ;XXX: 'make check' does "echo TODO"
-    (propagated-inputs
-     (list python-django python-django-debug-toolbar python-jsonplus
-           python-six python-sqlalchemy))
-    (synopsis "Django Debug Toolbar panel for SQLAlchemy")
-    (description
-     "This package completely mimics the default Django Debug Toolbar SQL
-panel (internally it is actually subclassed), but instead of displaying
-queries done via the Django ORM, SQLAlchemy generated queries are displayed.")
-    (license license:expat)))
-
 (define-public python-django-gravatar2
  (package
    (name "python-django-gravatar2")
@@ -1047,29 +1024,6 @@ applications with a @var{SEARCH_URL} variable.")
    (description "Pickled object field for Django")
    (license license:expat)))

-(define-public python-django-bulk-update
-  (package
-    (name "python-django-bulk-update")
-    (version "2.2.0")
-    (source (origin
-              (method url-fetch)
-              (uri (pypi-uri "django-bulk-update" version))
-              (sha256
-               (base32
-                "0dxkmrm3skyw82i0qa8vklxw1ma1y308kh9w2hcnvhpacn5cxdss"))))
-    (build-system python-build-system)
-    (arguments
-     ;; XXX: Tests require a Postgres database.
-     `(#:tests? #f))
-    (propagated-inputs
-     (list python-django))
-    (home-page "https://github.com/aykut/django-bulk-update")
-    (synopsis "Simple bulk update over Django ORM or with helper function")
-    (description
-      "Simple bulk update over Django ORM or with helper function.  This
-project aims to bulk update given objects using one query over Django ORM.")
-    (license license:expat)))
-
 (define-public python-django-contact-form
  (package
    (name "python-django-contact-form")
@@ -1655,8 +1609,8 @@ Django projects, which allows association of a number of tags with any
 provides features like a Web-browsable API and authentication policies.")
    (license license:bsd-2)))

-(define-public python-djangorestframework
-  (deprecated-package "python-djangorestframework" python-django-rest-framework))
+(define-deprecated-package python-djangorestframework
+  python-django-rest-framework)

 (define-public python-django-sekizai
  (package
@@ -23,6 +23,7 @@
 ;;; Copyright © 2023 Hilton Chain <hako@ultrarare.space>
 ;;; Copyright © 2024 John Kehayias <john.kehayias@protonmail.com>
 ;;; Copyright © 2024, 2025 Ashish SHUKLA <ashish.is@lostca.se>
+;;; Copyright © 2025 Artyom V. Poptsov <poptsov.artyom@gmail.com>
 ;;;
 ;;; This file is part of GNU Guix.
 ;;;
@@ -642,18 +643,18 @@ BIND and djbdns---whilst using relatively little memory.")
 (define-public unbound
  (package
    (name "unbound")
-    (version "1.24.0")
+    (version "1.24.1")
    (source
     (origin
       (method url-fetch)
       (uri (string-append "https://www.unbound.net/downloads/unbound-"
                           version ".tar.gz"))
       (sha256
-        (base32 "11jh8qkjxgry4mlv5lyjzycziz2vhjrm3qh722i8l0677jc24yql"))))
+        (base32 "1azfl6dkab043jjs7r8fxkh3mwxhg1wgc9q5mqcrch1rw8ricavz"))))
    (build-system gnu-build-system)
    (outputs '("out" "python"))
    (native-inputs
-     (list flex swig python-wrapper))
+     (list flex pkg-config swig python-wrapper))
    (inputs
     (list expat
           libevent
@@ -720,7 +721,7 @@ struct protoent *getprotobyname(const char *name) {
    p->p_name = \"udp\";
    p->p_proto = 17;
    p->p_aliases[0] = \"UDP\";
-  } else 
+  } else
    p = NULL;
  return p;
 }
@@ -756,7 +757,7 @@ struct servent *getservbyname(const char *name, const char *proto) {
    s->s_name = \"domain\";
    s->s_port = htons(53);
    s->s_proto = buf;
-  } else 
+  } else
    s = NULL;
  return s;
 }
@@ -1079,7 +1080,7 @@ LuaJIT, both a resolver library and a daemon.")
 (define-public hnsd
   (package
     (name "hnsd")
-     (version "1.0.0")
+     (version "2.0.0")
     (source (origin
               (method git-fetch)
               (uri (git-reference
@@ -1087,28 +1088,22 @@ LuaJIT, both a resolver library and a daemon.")
                     (commit (string-append "v" version))))
               (sha256
                (base32
-                 "1kdgff8rf8gmvwz2p758ilbjxpvz4xm6z41pa5353asg6xb853bb"))
+                 "1pqpf9vz1d01873wvkdnmsj9y2qrk8fka4c636qipsjv6ar2ply0"))
               (file-name (git-file-name name version))
               (modules '((guix build utils)))
               (snippet
                '(begin
                   ;; Delete the bundled copy of libuv.
                   (delete-file-recursively "uv")
-                   (substitute* "configure.ac"
-                     (("AC_CONFIG_SUBDIRS\\(\\[uv\\]\\)") ""))
                   (substitute* "Makefile.am"
                     (("SUBDIRS = uv") "\n")
                     (("\\$\\(top_builddir\\)/uv/libuv.la") "-luv")
-
-                     ;; Make sure the 'hnsd' binary is installed and
-                     ;; dynamically-linked.
-                     (("noinst_PROGRAMS") "bin_PROGRAMS")
-                     (("hnsd_LDFLAGS = -static") ""))
+                     ;; Make sure the 'hnsd' binary is dynamically-linked.
+                     (("^hnsd_LDFLAGS = -static") "\n"))

                   ;; This script tries to chdir to "uv" and doesn't do more
                   ;; than "autoreconf" so remove it.
-                   (delete-file "autogen.sh")
-                   #t))))
+                   (delete-file "autogen.sh")))))
     (build-system gnu-build-system)
     (arguments
      '(#:configure-flags '("--disable-static"))) ;no need for libhsk.a
@@ -1116,7 +1111,7 @@ LuaJIT, both a resolver library and a daemon.")
      (list autoconf automake libtool))
     (inputs
      (list unbound libuv))
-     (home-page "https://www.handshake.org/")
+     (home-page "https://handshake.org/")
     (synopsis "Resolver daemon for the Handshake naming protocol")
     (description
      "@command{hnsd} is a @dfn{host name resolver} for the Handshake Naming
@@ -1291,7 +1286,7 @@ nameservers other than libc.")
 (define-public smartdns
  (package
    (name "smartdns")
-    (version "46.1")
+    (version "47")
    (source (origin
              (method git-fetch)
              (uri (git-reference
@@ -1303,7 +1298,7 @@ nameservers other than libc.")
                          ((".*SYSTEMDSYSTEMUNITDIR.*") "")))
              (sha256
               (base32
-                "0jjzvm4i5978gb2xhkx7fhqwzgjnvwyk9a2d88zzv93mal7q9xi2"))))
+                "10a4nnrnf10n4rq166yixm0va1j0sdj9vca3kpwkzgn9blwvbqph"))))
    (build-system gnu-build-system)
    (arguments
     (list #:test-target "test"
@@ -1338,6 +1333,8 @@ nameservers other than libc.")
               (add-after 'check 'leave-test-dir
                 (lambda _
                   (chdir "../../source"))))))
+    ;; NOTE: DoQ and DoH3 support require OpenSSL 3.4+, which is currently not
+    ;; available in Guix.
    (inputs (list openssl))
    (native-inputs (list googletest `(,isc-bind "utils") which))
    (home-page "https://github.com/pymumu/smartdns")
@@ -49,6 +49,7 @@
  #:use-module (gnu packages glib)
  #:use-module (gnu packages golang)
  #:use-module (gnu packages golang-build)
+  #:use-module (gnu packages golang-check)
  #:use-module (gnu packages golang-web)
  #:use-module (gnu packages golang-xyz)
  #:use-module (gnu packages linux)
@@ -67,6 +68,110 @@
 ;; of several associated packages (docker-libnetwork and go-sctp).
 (define %docker-version "20.10.27")

+(define-public go-github-com-compose-spec-compose-go-v2
+  (package
+    (name "go-github-com-compose-spec-compose-go-v2")
+    (version "2.9.0")
+    (source
+     (origin
+       (method git-fetch)
+       (uri (git-reference
+              (url "https://github.com/compose-spec/compose-go")
+              (commit (string-append "v" version))))
+       (file-name (git-file-name name version))
+       (sha256
+        (base32 "18z626vjd0cbqs130nsqhx0vfr6hxarvwgrw5acydy7hfv594aiq"))
+       (modules '((guix build utils)))
+       (snippet
+        #~(begin
+            ;; Build fails when this file is kept: Code in directory
+            ;; /tmp/<...>/src/github.com/compose-spec/compose-go/v2 expects
+            ;; import "github.com/compose-spec/compose-go"
+            (delete-file "package.go")))))
+    (build-system go-build-system)
+    (arguments
+     (list
+      #:skip-build? #t
+      #:embed-files
+      #~(list "applicator"
+              "content"
+              "core"
+              "format"
+              "format-annotation"
+              "format-assertion"
+              "meta-data"
+              "schema"
+              "unevaluated"
+              "validation")
+      #:import-path "github.com/compose-spec/compose-go/v2"
+      #:test-flags
+      #~(list "-skip" (string-join
+                       ;; error decoding 'services[test].environment':
+                       ;; environment variable DEBUG is declared with a
+                       ;; trailing space
+                       (list "TestEnvironmentWhitespace"
+                             ;; ports_test.go:80: assertion failed: expected
+                             ;; error "Invalid ip address: 127.0.1", got
+                             ;; "invalid IP address: 127.0.1"
+                             "Test_transformPorts/invalid_IP"
+                             ;; types_test.go:190: assertion failed: expected
+                             ;; error "Invalid containerPort: 9999999", got
+                             ;; "invalid containerPort: 9999999"
+                             "TestParsePortConfig")
+                       "|"))))
+    (native-inputs
+     (list go-github-com-google-go-cmp
+           go-github-com-stretchr-testify
+           go-gotest-tools-v3))
+    (propagated-inputs
+     (list go-github-com-distribution-reference
+           go-github-com-docker-go-connections
+           go-github-com-docker-go-units
+           go-github-com-go-viper-mapstructure-v2
+           go-github-com-mattn-go-shellwords
+           go-github-com-opencontainers-go-digest
+           go-github-com-santhosh-tekuri-jsonschema-v6
+           go-github-com-sirupsen-logrus
+           go-github-com-xhit-go-str2duration-v2
+           go-go-yaml-in-yaml-v3
+           go-golang-org-x-sync
+           go-golang-org-x-text))
+    (home-page "https://compose-spec.io/")
+    (synopsis "Reference library for parsing and loading Compose YAML files")
+    (description
+     "This package provides a Golang reference library for parsing and
+loading Compose files as specified by the
+@url{https://github.com/compose-spec/compose-spec, Compose specification}.")
+    (license license:asl2.0)))
+
+(define-public go-github-com-docker-go-events
+  (package
+    (name "go-github-com-docker-go-events")
+    (version "0.0.0-20250808211157-605354379745")
+    (source
+     (origin
+       (method git-fetch)
+       (uri (git-reference
+             (url "https://github.com/docker/go-events")
+             (commit (go-version->git-ref version))))
+       (file-name (git-file-name name version))
+       (sha256
+        (base32 "0q3ylzyl670m3an32nhb0l5bsc3f4d9b963x3pjwsc94brg9l5qp"))))
+    (build-system go-build-system)
+    (arguments
+     (list
+      #:import-path "github.com/docker/go-events"))
+    (propagated-inputs
+     (list go-github-com-sirupsen-logrus))
+    (home-page "https://github.com/docker/go-events")
+    (synopsis "Composable event distribution for Golang")
+    (description
+     "This package implements a composable event distribution library,
+originally created to implement the notifications in
+@url{https://github.com/distribution/distribution/blob/v3.0.0/docs/content/about/notifications.md,
+Docker Registry 2}.")
+    (license license:asl2.0)))
+
 (define-public go-github-com-docker-go-metrics
  (package
    (name "go-github-com-docker-go-metrics")
@@ -410,7 +410,7 @@ the Net to search for documents which are not on the local system.")
 (define-public zeal
  (package
    (name "zeal")
-    (version "0.7.1")
+    (version "0.7.2")
    (source
     (origin
       (method git-fetch)
@@ -419,10 +419,11 @@ the Net to search for documents which are not on the local system.")
             (commit (string-append "v" version))))
       (file-name (git-file-name name version))
       (sha256
-        (base32 "1yz9zz18rh1d67w40ib4pna70vqkwa9i9nyj423rjysv5rdj2pzp"))))
+        (base32 "1slq3asssszim9y4lvqx08svilmyisk3cl35mmb676fsx7pningn"))))
    (build-system qt-build-system)
    (arguments
      (list
+       #:qtbase qtbase
       #:tests? #f))                    ;no tests
    (native-inputs
     (list extra-cmake-modules pkg-config))
@@ -430,12 +431,10 @@ the Net to search for documents which are not on the local system.")
     (list bash-minimal
           libarchive
           sqlite
-           qtbase-5
-           qtdeclarative-5
-           qtwayland-5
-           qtwebchannel-5
-           qtwebengine-5
-           qtquickcontrols-5
+           qtdeclarative
+           qtwayland
+           qtwebchannel
+           qtwebengine
           qtx11extras
           xcb-util-keysyms))
    (home-page "https://zealdocs.org/")
@@ -41,7 +41,7 @@
 (define-public dpdk
  (package
    (name "dpdk")
-    (version "24.07")
+    (version "25.07")
    (source (origin
              (method git-fetch)
              (uri (git-reference
@@ -50,7 +50,7 @@
              (file-name (git-file-name name version))
              (sha256
               (base32
-                "04i4j4c5vcyldh0435hr01d2d5c0xf6y0sfg64764f79902i8p6i"))))
+                "12bzmaiw4f4hz62grsp7bid0z2rpibwc21j62bfwmz4j3zci0w81"))))
    (build-system meson-build-system)
    (native-inputs (list pkg-config python-minimal python-pyelftools))
    (inputs (list
@@ -0,0 +1,198 @@
+;;; GNU Guix --- Functional package management for GNU
+;;; Copyright © 2023, 2024 Greg Hogan <code@greghogan.com>
+;;; Copyright © 2023, 2025 Ricardo Wurmus <rekado@elephly.net>
+;;; Copyright © 2024 Felix Gruber <felgru@posteo.net>
+;;; Copyright © 2024 Nicolas Graves <ngraves@ngraves.fr>
+;;; Copyright © 2024, 2025 Ekaitz Zarraga <ekaitz@elenq.tech>
+;;; Copyright © 2024, 2025 Sharlatan Hellseher <sharlatanus@gmail.com>
+;;;
+;;; This file is part of GNU Guix.
+;;;
+;;; GNU Guix is free software; you can redistribute it and/or modify it
+;;; under the terms of the GNU General Public License as published by
+;;; the Free Software Foundation; either version 3 of the License, or (at
+;;; your option) any later version.
+;;;
+;;; GNU Guix is distributed in the hope that it will be useful, but
+;;; WITHOUT ANY WARRANTY; without even the implied warranty of
+;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+;;; GNU General Public License for more details.
+;;;
+;;; You should have received a copy of the GNU General Public License
+;;; along with GNU Guix.  If not, see <http://www.gnu.org/licenses/>.
+
+(define-module (gnu packages duckdb)
+  #:use-module ((guix licenses) #:prefix license:)
+  #:use-module (guix build-system cmake)
+  #:use-module (guix build-system pyproject)
+  #:use-module ((guix build-system python) #:select (pypi-uri))
+  #:use-module (guix build-system r)
+  #:use-module (guix download)
+  #:use-module (guix gexp)
+  #:use-module (guix git-download)
+  #:use-module (guix packages)
+  #:use-module (guix utils)
+  #:use-module (gnu packages)
+  #:use-module (gnu packages base)
+  #:use-module (gnu packages cran)
+  #:use-module (gnu packages databases)
+  #:use-module (gnu packages python-build)
+  #:use-module (gnu packages python-science)
+  #:use-module (gnu packages python-xyz)
+  #:use-module (gnu packages statistics))
+
+;;; Commentary:
+;;;
+;;; This module contains DuckDB - an analytical in-process SQL database
+;;; management system (https://www.duckdb.org/) and it's binding in different
+;;; programming languages with other related to DuckDB packages.
+;;;
+;;; Code:
+
+(define-public duckdb
+  (package
+    (name "duckdb")
+    (version "1.4.1")
+    (source
+     (origin
+       (method git-fetch)
+       (uri (git-reference
+              (url "https://github.com/duckdb/duckdb")
+              (commit (string-append "v" version))))
+       (file-name (git-file-name name version))
+       (sha256
+        (base32 "1vywdhn930z4aw2ljxp5mx3cfivpvv1d88kq4rhizq3c4hpq9yf3"))))
+    (build-system cmake-build-system)
+    (arguments
+     (list
+      ;; TODO: Find out how to run tests, see: <.github/workflows>.
+      #:tests? #f
+      #:configure-flags
+      #~(list "-DBUILD_EXTENSIONS=autocomplete;icu;json;parquet;tpch;"
+              ;; There is no git checkout from which to read the version tag.
+              (string-append "-DOVERRIDE_GIT_DESCRIBE="
+                             "v" #$version "-0-g0123456789"))))
+    (home-page "https://duckdb.org")
+    (synopsis "In-process SQL OLAP database management system")
+    (description
+     "CLI and C/C++ source libraries for DuckDB, a relational (table-oriented)
+ @acronym{DBMS, Database Management System} that supports @acronym{SQL,
+Structured Query Language}, contains a columnar-vectorized query execution
+engine, and provides transactional @acronym{ACID, Atomicity Consistency
+Isolation and Durability} guarantees via bulk-optimized @acronym{MVCC,
+Multi-Version Concurrency Control}.  Data can be stored in persistent,
+single-file databases with support for secondary indexes.")
+    (license license:expat)))
+
+;; XXX: Try to inherit from duckdb and build from source with all extensions.
+(define-public python-duckdb
+  (package
+    (name "python-duckdb")
+    (version "1.3.2")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (pypi-uri "duckdb" version))
+       (sha256
+        (base32 "1x8zb47y8lzc4w0g013sim8x9vd1h96ra3dd0bvh91y73f5dyn66"))))
+    (build-system pyproject-build-system)
+    (arguments
+     (list
+      #:tests? #f ;FIXME: See <https://codeberg.org/guix/guix/issues/1436>.
+      #:test-flags
+      #~(list "--ignore=tests/slow/test_h2oai_arrow.py"
+              ;; Do not relay on mypy.
+              "--ignore=tests/stubs/test_stubs.py"
+              "-k" (string-append
+                    ;; Don't install anything, thank you.
+                    "not test_install_non_existent_extension"
+                    ;; _pybind11_conduit_v1_ not found.
+                    " and not test_wrap_coverage"
+                    ;; See <https://github.com/duckdb/duckdb/issues/11961>.
+                    " and not test_fetchmany"
+                    ;; See <https://github.com/duckdb/duckdb/issues/10702>.
+                    " and not test_connection_interrupt"
+                    " and not test_query_interruption"))
+      #:phases
+      #~(modify-phases %standard-phases
+          ;; Tests need this
+          (add-before 'check 'set-HOME
+            (lambda _ (setenv "HOME" "/tmp")))
+          ;; Later versions of pybind replace "_" with "const_name".
+          (add-after 'unpack 'pybind-compatibility
+            (lambda _
+              (with-directory-excursion "src/include/duckdb_python"
+                (substitute* '("python_objects.hpp"
+                               "pyfilesystem.hpp"
+                               "pybind11/conversions/pyconnection_default.hpp")
+                  (("const_name") "_"))))))))
+    (propagated-inputs
+     (list python-adbc-driver-manager))
+    (native-inputs
+     (list pybind11
+           python-fsspec
+           ;; python-google-cloud-storage ;python-grpcio fails (see: guix/guix#1436)
+           python-numpy
+           python-pandas
+           python-psutil
+           ;; python-pytest
+           python-setuptools-scm
+           python-setuptools
+           python-wheel))
+    (home-page "https://www.duckdb.org")
+    (synopsis "DuckDB embedded database")
+    (description "DuckDB is an in-process SQL OLAP database management
+system.")
+    (license license:expat)))
+
+(define-public r-duckdb
+  (package
+    (name "r-duckdb")
+    (version "1.2.2")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (cran-uri "duckdb" version))
+       (sha256
+        (base32 "161zxianyssvsrd2345v4bi1m2z7wj614z8343jb73vhlk6s9yyi"))
+       ;; This package bundles the duckdb sources and builds a custom variant
+       ;; of duckdb.  I'd be happy to link it with our duckdb library instead,
+       ;; but it does not seem possible to do that.
+       #;
+       (snippet
+        '(delete-file "src/duckdb.tar.xz"))))
+    (properties
+     '((upstream-name . "duckdb")
+       (updater-extra-native-inputs . ("tzdata-for-tests"))
+       ;; We don't seem to need this and I don't want to package it now.
+       (updater-ignored-native-inputs . ("r-dblog"))))
+    (build-system r-build-system)
+    (arguments (list #:tests? #false)) ;tests can time out on the build farm
+    (propagated-inputs (list r-dbi))
+    (native-inputs (list r-adbcdrivermanager
+                         r-arrow
+                         r-bit64
+                         r-callr
+                         r-clock
+                         r-dbitest
+                         r-dbplyr
+                         r-dplyr
+                         r-remotes
+                         r-rlang
+                         r-testthat
+                         r-tibble
+                         r-vctrs
+                         r-withr
+                         tzdata-for-tests))
+    (home-page "https://r.duckdb.org/")
+    (synopsis "DBI package for the DuckDB database management system")
+    (description
+     "The DuckDB project is an embedded analytical data management system with
+support for the Structured Query Language (SQL).  This package includes all of
+DuckDB and an R Database Interface (DBI) connector.")
+    (license license:expat)))
+
+;;;
+;;; Avoid adding new packages to the end of this file. To reduce the chances
+;;; of a merge conflict, place them above in alphabetic order.
+;;;
@@ -68,6 +68,7 @@
  #:use-module (gnu packages language)
  #:use-module (gnu packages libreoffice)
  #:use-module (gnu packages libusb)
+  #:use-module (gnu packages machine-learning)
  #:use-module (gnu packages music)
  #:use-module (gnu packages pantheon)
  #:use-module (gnu packages pdf)
@@ -136,14 +137,14 @@ with Microsoft Compiled HTML (CHM) files")
 (define-public calibre
  (package
    (name "calibre")
-    (version "8.4.0")
+    (version "8.13.0")
    (source
     (origin
       (method url-fetch)
       (uri (string-append "http://download.calibre-ebook.com/" version
                           "/calibre-" version ".tar.xz"))
       (sha256
-        (base32 "1s9m80nakclxvsw0lax9bak23qipnia74xpy9sv061jvidqb3rz6"))
+        (base32 "092zv9s0w87vwb5n54ps7lawjmwjqpmk93yp6lslnphpb6hqal6z"))
       (modules '((guix build utils)))
       (snippet
        '(begin
@@ -164,29 +165,30 @@ with Microsoft Compiled HTML (CHM) files")
    (build-system python-build-system)
    (native-inputs
     (list bash-minimal
+           cmake
           pkg-config
           python-flake8
           python-pyqt-builder
           qtbase                     ; for qmake
-           xdg-utils
-           cmake))
+           xdg-utils))
    (inputs
-     (list libxkbcommon
+     (list bash-minimal
+           espeak-ng
           ffmpeg
-           uchardet
-           bash-minimal
-           fontconfig
           font-liberation
+           fontconfig
           glib
           hunspell
           hyphen
           icu4c
-           libmtp
-           libpng
           libjpeg-turbo
           libjxr
+           libmtp
+           libpng
           libstemmer
           libusb
+           libxkbcommon
+           onnxruntime
           openssl
           optipng
           podofo
@@ -217,15 +219,16 @@ with Microsoft Compiled HTML (CHM) files")
           python-pychm
           python-pycryptodome
           python-pygments
+           python-pykakasi
           python-pyqt-6
           python-pyqtwebengine-6
-           python-pykakasi
           python-regex
           python-xxhash
-           speech-dispatcher
           python-zeroconf
           qtwebengine
-           sqlite))
+           speech-dispatcher
+           sqlite
+           uchardet))
    (arguments
     (list
      ;; Calibre is using setuptools by itself, but the setup.py is not
@@ -255,6 +258,16 @@ with Microsoft Compiled HTML (CHM) files")
              (substitute* "setup/plugins_mirror.py"
                (("href=\"//calibre-ebook.com/favicon.ico\"")
                 "href=\"favicon.ico\""))))
+          (add-after 'unpack 'skip-7z-test ;FIXME: require py7zr >= 1.0
+            (lambda _
+              (substitute* "src/calibre/utils/seven_zip.py"
+                (("(def test_basic\\(\\).*)" line)
+                 (string-append line "\n    return True\n")))))
+          (add-after 'unpack 'skip-flaky-test
+            (lambda _
+              (substitute* "src/calibre/srv/tests/web_sockets.py"
+                (("^([ \t]*)def test_websocket_basic\\(.*" line lead)
+                 (string-append line "\n" lead "    return True\n")))))
          (add-before 'build 'configure
            (lambda* (#:key inputs #:allow-other-keys)
              (substitute* "setup/build.py"
@@ -4,7 +4,7 @@
 ;;; Copyright © 2016 Hartmut Goebel <h.goebel@crazy-compilers.com>
 ;;; Copyright © 2017-2023 Efraim Flashner <efraim@flashner.co.il>
 ;;; Copyright © 2018–2021 Tobias Geerinckx-Rice <me@tobias.gr>
-;;; Copyright © 2018-2024 Nicolas Goaziou <mail@nicolasgoaziou.fr>
+;;; Copyright © 2018-2025 Nicolas Goaziou <mail@nicolasgoaziou.fr>
 ;;; Copyright © 2020 Robert Smith <robertsmith@posteo.net>
 ;;; Copyright © 2020 Guy Fleury Iteriteka <gfleury@disroot.org>
 ;;; Copyright © 2020 Jakub Kądziołka <kuba@kadziolka.net>
@@ -13,6 +13,8 @@
 ;;; Copyright © 2022 Luis Felipe López Acevedo <luis.felipe.la@protonmail.com>
 ;;; Copyright © 2023 Maxim Cournoyer <maxim@guixotic.coop>
 ;;; Copyright © 2024 Luis Higino <luishenriquegh2701@gmail.com>
+;;; Copyright © 2025 Andreas Enge <andreas@enge.fr>
+;;; Copyright © 2025 Arun Isaac <arunisaac@systemreboot.net>
 ;;;
 ;;; This file is part of GNU Guix.
 ;;;
@@ -36,6 +38,7 @@
  #:use-module (gnu packages base)
  #:use-module (gnu packages bash)
  #:use-module (gnu packages compression)
+  #:use-module (gnu packages cups)
  #:use-module (gnu packages curl)
  #:use-module (gnu packages databases)
  #:use-module (gnu packages django)
@@ -452,100 +455,42 @@ specialized device.")
    (build-system qt-build-system)
    (arguments
     (list
+      #:qtbase qtbase
      #:tests? #f                       ;no tests
-      #:modules '((guix build qt-build-system)
-                  ((guix build gnu-build-system) #:prefix gnu:)
-                  (guix build utils))
      #:phases
      #~(modify-phases %standard-phases
          (add-after 'unpack 'set-initial-values
-            ;; Remove useless "Check for updates" action from menu.  Also
-            ;; prevent pop-up window about importing Open Sankore documents
-            ;; since we don't package OpenBoard-Importer.
+            ;; Remove useless "Check for updates" action from menu.
            (lambda _
              (substitute* "src/core/UBSettings.cpp"
                (("(appHideCheckForSoftwareUpdate = .*?)false(\\);)" _ beg end)
-                 (string-append beg "true" end))
-                (("(appLookForOpenSankoreInstall = .*?)true(\\);)" _ beg end)
-                 (string-append beg "false" end)))))
-          (add-after 'unpack 'fix-hard-coded-env
-            (lambda* (#:key inputs #:allow-other-keys)
-              (substitute* "src/frameworks/UBPlatformUtils_linux.cpp"
-                (("/usr/bin/env") (search-input-file inputs "/bin/env")))))
-          (add-after 'unpack 'fix-library-path
-            (lambda* (#:key inputs #:allow-other-keys)
-              (substitute* "OpenBoard.pro"
-                (("/usr/include/quazip5")
-                 (search-input-directory inputs "/include/QuaZip-Qt5-1.5/quazip"))
-                (("-lquazip5")
-                 "-lquazip1-qt5")
-                (("/usr/include/poppler")
-                 (search-input-directory inputs "/include/poppler")))))
-          (replace 'configure
-            (lambda _
-              (invoke "qmake" "OpenBoard.pro")))
-          (replace 'build (assoc-ref gnu:%standard-phases 'build))
-          (replace 'install
-            (lambda* (#:key inputs #:allow-other-keys)
-              (let* ((share (string-append #$output "/share"))
-                     (openboard (string-append share "/openboard"))
-                     (i18n (string-append openboard "/i18n")))
-                ;; Install data.
-                (with-directory-excursion "resources"
-                  (for-each (lambda (directory)
-                              (let ((target
-                                     (string-append openboard "/" directory)))
-                                (mkdir-p target)
-                                (copy-recursively directory target)))
-                            '("customizations" "etc" "library"))
-                  (mkdir-p i18n)
-                  (for-each (lambda (f)
-                              (install-file f i18n))
-                            (find-files "i18n" "\\.qm$")))
-                ;; Install desktop file an icon.
-                (install-file "resources/images/OpenBoard.png"
-                              (string-append share
-                                             "/icons/hicolor/64x64/apps/"))
-                (make-desktop-entry-file
-                 (string-append share "/applications/" #$name ".desktop")
-                 #:name "OpenBoard"
-                 #:comment "Interactive whiteboard application"
-                 #:exec "openboard %f"
-                 #:icon "OpenBoard"
-                 #:mime-type "application/ubz"
-                 #:categories '("Education"))
-                ;; Install executable.
-                (install-file "build/linux/release/product/OpenBoard" openboard)
-                (let ((bin (string-append #$output "/bin")))
-                  (mkdir-p bin)
-                  (symlink (string-append openboard "/OpenBoard")
-                           (string-append bin "/openboard")))))))))
+                 (string-append beg "true" end))))))))
    (native-inputs
-     (list qttools-5))
+     (list pkg-config qttools))
    (inputs
     (list alsa-lib
           coreutils-minimal            ;for patched 'env' shebang
-           ffmpeg-4
+           cups-minimal
+           ffmpeg
           freetype
           lame
           libass
           libfdk
-           libressl
           libtheora
           libva
           libvorbis
           libvpx
           libx264
+           openssl
           opus
           poppler
-           qtbase-5
-           qtdeclarative-5
-           qtmultimedia-5
-           qtsvg-5
-           qtwebchannel-5
-           qtwebengine-5
-           qtxmlpatterns-5
-           quazip-5
+           qt5compat
+           qtdeclarative
+           qtmultimedia
+           qtsvg
+           qtwebchannel
+           qtwebengine
+           quazip
           sdl
           zlib))
    (home-page "https://openboard.ch/")
@@ -560,7 +505,7 @@ a pen-tablet display and a beamer.")
 (define-public fet
  (package
    (name "fet")
-    (version "6.28.4")
+    (version "7.5.4")
    (source
     (origin
       (method url-fetch)
@@ -569,7 +514,7 @@ a pen-tablet display and a beamer.")
              (list (string-append directory base)
                    (string-append directory "old/" base))))
       (sha256
-        (base32 "11mcbgi8lima4fng78lqdkd5km212drkk5l4bkzz1pz1k7wcykfn"))))
+        (base32 "0vjjvr9vs3vxncrikchmk60qa99d5wyxja6b3p46vgfaziv1nj31"))))
    (build-system gnu-build-system)
    (arguments
     (list
@@ -596,7 +541,7 @@ algorithm.
 Usually, FET is able to solve a complicated timetable in maximum 5-20 minutes.
 For extremely difficult timetables, it may take a longer time, a matter of
 hours.")
-    (license license:agpl3+)))
+    (license license:agpl3)))

 (define-public klavaro
  (package
@@ -1130,6 +1075,61 @@ learning for programming languages.")
 simple concepts using multimedia flash cards and spaced reviews.")
    (license license:public-domain)))

+(define-public hardv
+  (package
+    (name "hardv")
+    (version "5.0.0")
+    (source (origin
+              (method git-fetch)
+              (uri (git-reference
+                     (url "https://github.com/dongyx/hardv")
+                     (commit (string-append "v" version))))
+              (file-name (git-file-name name version))
+              (sha256
+               (base32
+                "0l1wb7hlyldl5hq0z9a1a1rrgn33rjyqb08jph3q7mcn5p3qx40i"))))
+    (build-system gnu-build-system)
+    (arguments
+     (list #:make-flags #~(list (string-append "prefix=" #$output)
+                                (string-append "CC=" #$(cc-for-target)))
+           #:phases
+           #~(modify-phases %standard-phases
+               (add-after 'unpack 'patch-paths
+                 (lambda* (#:key inputs #:allow-other-keys)
+                   (substitute* (list "hardv.man1" "learn.c")
+                     (("/bin/sh")
+                      (search-input-file inputs "/bin/sh")))))
+               (delete 'configure)
+               (delete 'check)
+               (add-after 'install 'check
+                 (lambda* (#:key tests? #:allow-other-keys)
+                   ;; Tests can only be run after installation.
+                   (when tests?
+                     (setenv "PATH"
+                             (string-append #$output "/bin:" (getenv "PATH")))
+                     (invoke "make" "test")))))))
+    (home-page "https://github.com/dongyx/hardv")
+    (synopsis "Spaced repetition flash card program")
+    (description "HardV is a powerful spaced repetition flash card program.
+The key features are:
+
+@itemize
+@item HardV runs in the CLI mode by default, but you may configure it
+to be a TUI program, or to view images in a GUI window.
+@item HardV can open the editor, send the content you wrote to an online
+judging system, and determine the next quiz time by the judging result.
+@item It can be used to implement keyboard shortcut practice, cloze deletion,
+text-to-speech review, typing in the answer, and more.
+@item The format of input files are easy to be parsed by both human and other
+Unix utilities like grep, sed, and awk.
+@item Metadata like scheduled time is written back to input files; thus all
+your data is in files created and managed by yourself.
+@item HardV is a Unix filter in the default mode; that makes it easy to be
+called by other programs.  For example, you could pipe HardV to a voice
+synthesizer to make an audio quiz.
+@end itemize")
+    (license license:bsd-2)))
+
 (define-public tagainijisho
  (package
    (name "tagainijisho")
@@ -13,7 +13,7 @@
 ;;; Copyright © 2022, 2024, 2025 Artyom V. Poptsov <poptsov.artyom@gmail.com>
 ;;; Copyright © 2016 Danny Milosavljevic <dannym@scratchpost.org>
 ;;; Copyright © 2019 Amin Bandali <bandali@gnu.org>
-;;; Copyright © 2020 Vinicius Monego <monego@posteo.net>
+;;; Copyright © 2020, 2021, 2022, 2023, 2024, 2025 Vinicius Monego <monego@posteo.net>
 ;;; Copyright © 2021 Andrew Miloradovsky <andrew@interpretmath.pw>
 ;;; Copyright © 2022 Christian Gelinek <cgelinek@radlogic.com.au>
 ;;; Copyright © 2022 jgart <jgart@dismail.de>
@@ -21,6 +21,9 @@
 ;;; Copyright © 2024 Jakob Kirsch <jakob.kirsch@web.de>
 ;;; Copyright © 2025 Zheng Junjie <873216071@qq.com>
 ;;; Copyright © 2022, 2025 Evgeny Pisemsky <mail@pisemsky.site>
+;;; Copyright © 2025, Ekaitz Zarraga <ekaitz@elenq.tech>
+;;; Copyright © 2021, 2022 Guillaume Le Vaillant <glv@posteo.net>
+;;; Copyright © 2020, 2023 Marius Bakke <marius@gnu.org>
 ;;;
 ;;; This file is part of GNU Guix.
 ;;;
@@ -73,6 +76,7 @@
  #:use-module (gnu packages freedesktop)
  #:use-module (gnu packages fontutils)
  #:use-module (gnu packages gawk)
+  #:use-module (gnu packages gcc)
  #:use-module (gnu packages gd)
  #:use-module (gnu packages gdb)
  #:use-module (gnu packages gettext)
@@ -92,6 +96,7 @@
  #:use-module (gnu packages maths)
  #:use-module (gnu packages m4)
  #:use-module (gnu packages maths)
+  #:use-module (gnu packages mpi)
  #:use-module (gnu packages perl)
  #:use-module (gnu packages pkg-config)
  #:use-module (gnu packages python)
@@ -236,7 +241,7 @@ formal verification.")
  (package
    (inherit abc)
    (name "abc-yosyshq")
-    (version "0.58")
+    (version "0.59")
    (source (origin
              (method git-fetch)
              (uri (git-reference
@@ -245,7 +250,7 @@ formal verification.")
              (file-name (git-file-name name version))
              (sha256
               (base32
-                "191hsznsmsjn8100n50qsh3ng8wgrnyfhr7qcnb8yskiwqp37pjh"))))
+                "110hvmwspp7bprwwilcwb8kw6wcqrj9z214269fa75j9027k5l0c"))))
    (home-page "https://github.com/YosysHQ/abc/")
    (description "ABC is a program for sequential logic synthesis and
 formal verification.  This is the Yosyshq fork of ABC.")
@@ -620,6 +625,48 @@ used in the declarative section of design units.")
      (native-inputs
       '()))))

+(define-public libngspice
+  ;; Note: The ngspice's build system does not allow us to build both the
+  ;; library and the executables in one go.  Thus, we have two packages.
+  ;; See <https://debbugs.gnu.org/cgi/bugreport.cgi?bug=27344#236>.
+  (package
+    (name "libngspice")
+    (version "44.2")
+    (source
+     (origin
+       (method git-fetch)
+       (uri (git-reference
+              (url "https://git.code.sf.net/p/ngspice/ngspice")
+              (commit (string-append "ngspice-" version))))
+       (file-name (git-file-name name version))
+       (sha256
+        (base32 "1vp27149kx8l7397bv5p708jqph1kma8rb9bl7ckgmbr9sw9cn3q"))))
+    (build-system gnu-build-system)
+    (arguments
+     (list
+      #:tests? #f ;there are no tests for libngspice
+      #:phases #~(modify-phases %standard-phases
+                   (add-after 'install 'delete-scripts
+                     (lambda _
+                       (delete-file-recursively
+                        (string-append #$output
+                                       "/share/ngspice/scripts")))))
+      #:configure-flags #~(list "--enable-openmp" "--enable-cider"
+                                "--enable-xspice" "--with-ngshared")))
+    (native-inputs (list autoconf automake bison flex libtool))
+    (inputs (list openmpi))
+    (home-page "https://ngspice.sourceforge.io/")
+    (synopsis "Mixed-level/mixed-signal circuit simulator")
+    (description
+     "Ngspice is a mixed-level/mixed-signal circuit simulator.  It includes
+@code{Spice3f5}, a circuit simulator, and @code{Xspice}, an extension that
+provides code modeling support and simulation of digital components through
+an embedded event driven algorithm.")
+    (license (list license:lgpl2.0+ ;code in frontend/numparam
+                   (license:non-copyleft "file:///COPYING") ;spice3 bsd-style
+                   license:bsd-3 ;ciderlib
+                   license:public-domain)))) ;xspice
+
 (define librnd
  (package
    (name "librnd")
@@ -1006,13 +1053,32 @@ which allows one to install the M8 firmware on any Teensy.")
    (synopsis
     (string-append (package-synopsis nextpnr) " Cli only version."))))

-(define-public nextpnr-ice40
-  (deprecated-package "nextpnr-ice40" nextpnr))
+(define-deprecated-package nextpnr-ice40
+  nextpnr)
+
+(define-public ngspice
+  ;; The ngspice executables (see libngpsice above.)
+  (package
+    (inherit libngspice)
+    (name "ngspice")
+    (arguments
+     (substitute-keyword-arguments (package-arguments libngspice)
+       ;; Tests require a X server running, so we keep them disabled
+       ((#:configure-flags flags)
+        #~(cons*  "--enable-rpath" "--with-x" "--with-readline=yes"
+                  (delete "--with-ngshared" #$flags)))
+       ((#:phases phases)
+        #~(modify-phases #$phases
+            (delete 'delete-scripts)))))
+    (native-inputs
+     (modify-inputs (package-native-inputs libngspice)
+       (append perl)))
+    (inputs (list libngspice readline libxaw libx11))))

 (define-public nvc
  (package
    (name "nvc")
-    (version "1.18.0")
+    (version "1.18.1")
    (source (origin
              (method git-fetch)
              (uri (git-reference
@@ -1021,7 +1087,7 @@ which allows one to install the M8 firmware on any Teensy.")
              (file-name (git-file-name name version))
              (sha256
               (base32
-                "1b8bsmxv2p9v8g7yzdj8s22l5bx9n58kmbklgnj17gd362lai51y"))))
+                "1l4aiaf2009wak7bccpm8x2pr27pr2b5w2naz874y8k98wqq5zlr"))))
    (build-system gnu-build-system)
    (arguments
     (list #:out-of-source? #t
@@ -1329,8 +1395,8 @@ The following features are currently available:

 (define-public opensta
  ;; There are no releases, we use last commit.
-  (let ((commit "12f03395ec80d3593f4796b2a3cf5480e75735bd")
-        (revision "0"))
+  (let ((commit "6e29fcb3f0d8a73af3a0913eb945b665a72e69cb")
+        (revision "1"))
    (package
      (name "opensta")
      ;; The version string is taken from the CMakeLists.txt.
@@ -1343,7 +1409,7 @@ The following features are currently available:
               (commit commit)))
         (file-name (git-file-name name version))
         (sha256
-          (base32 "1gka50p4wv2b49d8jbw5fs3qg7cppa8ynl3diqgdf8mqgskwapzf"))))
+          (base32 "1drhgp4s6q8j4fhsbxn6szmxl48xdlq0x5z4g6z72img453qvglx"))))
      (build-system cmake-build-system)
      (arguments
       (list
@@ -1518,6 +1584,35 @@ verification.")
        #~(modify-phases #$phases
            (delete 'fix-scripts)))))))

+(define-public python-pyucis
+  (package
+    (name "python-pyucis")
+    (version "0.1.5")
+    (source
+     (origin
+       (method git-fetch)
+       (uri (git-reference
+              (url "https://github.com/fvutils/pyucis/")
+              (commit (string-append "v" version))))
+       (file-name (git-file-name name version))
+       (sha256
+        (base32 "19bxmhqkdmhbibkbzcjqvzvcni1kzg28nqz9vh6zj73hl26lf2ij"))))
+    (build-system pyproject-build-system)
+    (native-inputs
+     (list python-pytest
+           python-setuptools))
+    (propagated-inputs
+     (list python-jsonschema-objects
+           python-lxml
+           python-pyyaml))
+    (home-page "https://fvutils.github.io/pyucis//")
+    (synopsis "Python interface to UCIS data")
+    (description
+     "The code{PyUCIS} library provides two APIs for creating and accessing
+coverage data via the @acronym{UCIS, Unified Coverage Interoperability
+Standard} data mode.")
+    (license license:asl2.0)))
+
 (define-public python-cocotb
  (package
    (name "python-cocotb")
@@ -1816,7 +1911,7 @@ design.")
 (define-public python-vsg
  (package
    (name "python-vsg")
-    (version "3.34.0")
+    (version "3.35.0")
    (source
     (origin
       (method git-fetch)
@@ -1825,7 +1920,7 @@ design.")
             (commit version)))
       (file-name (git-file-name name version))
       (sha256
-        (base32 "0sryf1wv4r5maxj4di5rpsmzcxins3gq8aksv7cpw6ywvdk1nj5l"))))
+        (base32 "01hwida51bdyzv6wy71nby9cllf6nbvin5a0lhl4dizvnp3h4mb4"))))
    (build-system pyproject-build-system)
    (arguments
     (list
@@ -2034,6 +2129,8 @@ input and outputs an XML dataset.")
          (add-after 'unpack 'adjust-default-settings
            (lambda* (#:key inputs #:allow-other-keys)
              (substitute* "qucs/settings.cpp"
+                (("\"/usr/local/Xyce.*\"")
+                 (format #f "~s" (search-input-file inputs "bin/Xyce")))
                (("\"ngspice\"")
                 (format #f "~s" (search-input-file inputs "bin/ngspice")))
                (("\"octave\"")
@@ -2044,11 +2141,20 @@ input and outputs an XML dataset.")
                `("PATH" ":" prefix
                  (,(string-append #$(this-package-input "ngspice") "/bin")
                   ,(string-append
-                     #$(this-package-input "qucsator-rf") "/bin")))))))))
+                     #$(this-package-input "qucsator-rf") "/bin")
+                   ,(string-append
+                     #$(this-package-input "xyce-serial") "/bin")))))))))
    (native-inputs (list qttools))
    (inputs
-     ;; TODO Add xyce-serial to the list.
-     (list bash-minimal octave qtbase qtcharts qtsvg qtwayland qucsator-rf ngspice))
+     (list bash-minimal
+           ngspice
+           octave
+           qtbase
+           qtcharts
+           qtsvg
+           qtwayland
+           qucsator-rf
+           xyce-serial))
    (synopsis "GUI for different circuit simulation kernels")
    (description
     "@acronym{Qucs-S, Quite universal circuit simulator with SPICE} provides
@@ -2143,7 +2249,7 @@ suite.")
 (define-public sch-rnd
  (package
    (name "sch-rnd")
-    (version "1.0.9")
+    (version "1.0.10")
    (source
     (origin
       (method url-fetch)
@@ -2151,7 +2257,7 @@ suite.")
                           "releases/sch-rnd-" version ".tar.gz"))
       (sha256
        (base32
-         "07a1ik0rpsa5cscg9l7i5rnipx76543s7cdnkg802747rral7yj5"))))
+         "1wa43jhgzlchqpql9qdz7q4ps4wfk88akrl3pqgcb61mdwy51s20"))))
    (build-system glib-or-gtk-build-system)
    (arguments
     (list
@@ -2229,7 +2335,7 @@ them usable as simple logic analyzer and/or oscilloscope hardware.")
 (define-public symbiyosys
  (package
    (name "symbiyosys")
-    (version "0.58")
+    (version "0.59")
    (source
     (origin
       (method git-fetch)
@@ -2238,7 +2344,7 @@ them usable as simple logic analyzer and/or oscilloscope hardware.")
             (commit (string-append "v" version))))
       (file-name (git-file-name name version))
       (sha256
-        (base32 "0fja71y1wkqdwc3cwwk9ifaf33hhnxr8khlj9fhadbcc66rg1s56"))))
+        (base32 "1viah5rm22d0c2v1fsm04brhavl4522h36gv80d7647alkvdfqb9"))))
    (build-system gnu-build-system)
    (arguments
     (list
@@ -2366,6 +2472,96 @@ using different abstraction levels.")
 VPI Interface, Elaborator, Serialization, Visitor and Listener.")
    (license license:asl2.0)))

+(define trilinos-serial-xyce
+  ;; Note: This is a Trilinos containing only the packages Xyce needs, so we
+  ;; keep it private.  See
+  ;; <https://debbugs.gnu.org/cgi/bugreport.cgi?bug=27344#248>.
+  ;; TODO: Remove when we have modular Trilinos packages?
+  (package
+    (name "trilinos-serial-xyce")
+    (version "12.12.1")
+    (source
+     (origin
+       (method git-fetch)
+       (uri (git-reference
+             (url "https://github.com/trilinos/Trilinos")
+             (commit (string-append "trilinos-release-"
+                                    (string-map (lambda (chr)
+                                                  (case chr
+                                                    ((#\.) #\-)
+                                                    (else chr)))
+                                                version)))))
+       (file-name (git-file-name name version))
+       (sha256
+        (base32
+         "1smz3wlpfyjn0czmpl8bj4hw33p1zi9nnfygpsx7jl1523nypa1n"))))
+    (build-system cmake-build-system)
+    (arguments
+     (list
+      #:tests? #f                       ;no tests
+      #:phases
+      #~(modify-phases %standard-phases
+          ;; Delete unneeded tribits(build system) directory which makes
+          ;; validate-runpath phase to fail.
+          (add-before 'validate-runpath 'delete-tribits
+            (lambda _
+              (delete-file-recursively
+               (string-append #$output "/lib/cmake/tribits")))))
+      #:configure-flags
+      #~(list "-DCMAKE_CXX_FLAGS=-O3 -fPIC"
+              "-DCMAKE_C_FLAGS=-O3 -fPIC"
+              "-DCMAKE_Fortran_FLAGS=-O3 -fPIC"
+              "-DTrilinos_ENABLE_NOX=ON"
+              "-DNOX_ENABLE_LOCA=ON"
+              "-DTrilinos_ENABLE_EpetraExt=ON"
+              "-DEpetraExt_BUILD_BTF=ON"
+              "-DEpetraExt_BUILD_EXPERIMENTAL=ON"
+              "-DEpetraExt_BUILD_GRAPH_REORDERINGS=ON"
+              "-DTrilinos_ENABLE_TrilinosCouplings=ON"
+              "-DTrilinos_ENABLE_Ifpack=ON"
+              "-DTrilinos_ENABLE_Isorropia=ON"
+              "-DTrilinos_ENABLE_AztecOO=ON"
+              "-DTrilinos_ENABLE_Belos=ON"
+              "-DTrilinos_ENABLE_Teuchos=ON"
+              "-DTeuchos_ENABLE_COMPLEX=ON"
+              "-DTrilinos_ENABLE_Amesos=ON"
+              "-DAmesos_ENABLE_KLU=ON"
+              "-DAmesos_ENABLE_UMFPACK=ON"
+              "-DTrilinos_ENABLE_Sacado=ON"
+              "-DTrilinos_ENABLE_Kokkos=OFF"
+              "-DTrilinos_ENABLE_ALL_OPTIONAL_PACKAGES=OFF"
+              "-DTPL_ENABLE_AMD=ON"
+              "-DTPL_ENABLE_UMFPACK=ON"
+              "-DTPL_ENABLE_BLAS=ON"
+              "-DTPL_ENABLE_LAPACK=ON")))
+    (native-inputs (list gfortran swig))
+    (inputs (list boost lapack suitesparse))
+    (home-page "https://trilinos.org")
+    (synopsis "Engineering and scientific problems algorithms")
+    (description
+     "The Trilinos Project is an effort to develop algorithms and enabling
+technologies within an object-oriented software framework for the solution of
+large-scale, complex multi-physics engineering and scientific problems.  A
+unique design feature of Trilinos is its focus on packages.")
+    (license (list license:lgpl2.1+
+                   license:bsd-3))))
+
+(define trilinos-parallel-xyce
+  (package
+    (inherit trilinos-serial-xyce)
+    (name "trilinos-parallel-xyce")
+    (arguments
+     (substitute-keyword-arguments
+         (package-arguments trilinos-serial-xyce)
+       ((#:configure-flags flags)
+        #~(cons* "-DTrilinos_ENABLE_ShyLU=ON"
+                 "-DTrilinos_ENABLE_Zoltan=ON"
+                 "-DTPL_ENABLE_MPI=ON"
+                 #$flags))))
+    (inputs
+     (modify-inputs (package-inputs trilinos-serial-xyce)
+       (prepend openmpi)))))
+
 (define-public verilator
  (package
    (name "verilator")
@@ -2426,32 +2622,98 @@ and coverage-analysis points.  It outputs single- or multi-threaded
    (license license:lgpl3)))

 (define-public xoscope
+  (let ((revision "0.0.0")
+        (commit "d97b9b186a4137582ae27fce1da73f51c06f852e"))
  (package
    (name "xoscope")
-    (version "2.3")
+    (version (git-version "2.3" revision commit))
    (source (origin
-              (method url-fetch)
-              (uri (string-append "mirror://sourceforge/xoscope/xoscope/"
-                                  version "/xoscope-" version ".tar.gz"))
+              (method git-fetch)
+              (uri (git-reference
+                     (url "https://git.code.sf.net/p/xoscope/code")
+                     (commit commit)))
+              (file-name (git-file-name name version))
              (sha256
               (base32
-                "0a5ycfc1qdmibvagc82r2mhv2i99m6pndy5i6ixas3j2297g6pgq"))))
+                "1jaz14pb8lx1y34f979v507dmkrq3wdczi0hkqzb64zg76cdkwya"))))
    (build-system gnu-build-system)
    (native-inputs
-     (list m4 pkg-config))
+     (list m4 pkg-config automake libtool autoconf))
    (inputs
     (list alsa-lib comedilib fftw gtk+ gtkdatabox))
    (synopsis "Digital oscilloscope")
    (description "Xoscope is a digital oscilloscope that can acquire signals
 from ALSA, ESD, and COMEDI sources.  This package currently does not include
-support for ESD sources.")
+support for ESD or COMEDI sources.")
    (home-page "https://xoscope.sourceforge.net/")
-    (license license:gpl2+)))
+    (license license:gpl2+))))
+
+(define-public xyce-serial
+  (package
+    (name "xyce-serial")
+    (version "6.8")
+    (source
+     (origin (method url-fetch)
+             (uri (string-append "https://archive.org/download/Xyce-"
+                                 version "/Xyce-" version ".tar.gz"))
+             (sha256
+              (base32
+               "09flp1xywbb2laayd9rg8vd0fjsh115y6k1p71jacy0nrbdvvlcg"))))
+    (build-system gnu-build-system)
+    (arguments
+     (list
+      #:tests? #f
+      #:configure-flags
+      #~(list
+         "CXXFLAGS=-O3"
+         (string-append "CFLAGS="
+                        " -Wno-error=builtin-declaration-mismatch"
+                        " -Wno-error=implicit-function-declaration"
+                        " -Wno-error=implicit-int")
+         (string-append "ARCHDIR=" #$trilinos-serial-xyce))))
+    (native-inputs
+     (list bison-3.0                    ;'configure' fails with Bison 3.4
+           flex
+           gfortran))
+    (inputs
+     (list fftw lapack suitesparse trilinos-serial-xyce))
+    (home-page "https://xyce.sandia.gov/")
+    (synopsis "High-performance analog circuit simulator")
+    (description
+     "Xyce is a SPICE-compatible, high-performance analog circuit simulator,
+capable of solving extremely large circuit problems by supporting large-scale
+parallel computing platforms.  It also supports serial execution.")
+    (license license:gpl3+)))
+
+(define-public xyce-parallel
+  (package
+    (inherit xyce-serial)
+    (name "xyce-parallel")
+    (arguments
+     (substitute-keyword-arguments
+         (package-arguments xyce-serial)
+       ((#:configure-flags flags)
+        #~(list "CXXFLAGS=-O3"
+                "CXX=mpiCC"
+                "CC=mpicc"
+                "F77=mpif77"
+                "--enable-mpi"
+                (string-append
+                 "CFLAGS="
+                 " -Wno-error=builtin-declaration-mismatch"
+                 " -Wno-error=implicit-function-declaration"
+                 " -Wno-error=implicit-int")
+                (string-append "ARCHDIR=" #$trilinos-parallel-xyce)))))
+    (propagated-inputs (list openmpi))
+    (inputs
+     (modify-inputs (package-inputs xyce-serial)
+       (append zlib)
+       (replace "trilinos-serial-xyce" trilinos-parallel-xyce)))))

 (define-public yosys
  (package
    (name "yosys")
-    (version "0.58")
+    (version "0.59")
    (source
     (origin
       (method git-fetch)
@@ -2459,7 +2721,7 @@ support for ESD sources.")
              (url "https://github.com/YosysHQ/yosys")
              (commit (string-append "v" version))))
       (sha256
-        (base32 "13095d587dvnj6n1fhw5whda7qhafmmng0qz6qa52cdxriz63kka"))
+        (base32 "0bgijlivkhq338rbd056pjhdbjgwbd8l10afzp2dzlhn03j4l140"))
       (file-name (git-file-name name version))))
    (build-system gnu-build-system)
    (arguments
@@ -2497,9 +2759,11 @@ support for ESD sources.")
          (replace 'configure
            (lambda* (#:key make-flags #:allow-other-keys)
              (apply invoke "make" "config-gcc" make-flags)))
-          (add-after 'configure 'use-external-abc
+          (add-after 'configure 'configure-makefile
            (lambda* (#:key inputs #:allow-other-keys)
              (substitute* '("Makefile")
+                (("ENABLE_EDITLINE \\:= 0")
+                 "ENABLE_EDITLINE := 1")
                (("ABCEXTERNAL \\?=")
                 (string-append "ABCEXTERNAL = "
                                (search-input-file inputs "/bin/abc"))))))
@@ -2528,6 +2792,7 @@ support for ESD sources.")
                         gawk ;for the tests and "make" progress pretty-printing
                         iverilog ;for the tests
                         pkg-config
+                         perl
                         python
                         tcl)) ;tclsh for the tests
    (inputs (list abc-yosyshq
@@ -15,6 +15,8 @@
 ;;; Copyright © 2024 Zheng Junjie <873216071@qq.com>
 ;;; Copyright © 2025 John Kehayias <john.kehayias@protonmail.com>
 ;;; Copyright © 2025 Nicolas Graves <ngraves@ngraves.fr>
+;;; Copyright © 2025 Danny Milosavljevic <dannym@scratchpost.org>
+;;; Copyright © 2025 Maxim Cournoyer <maxim@guixotic.coop>
 ;;;
 ;;; This file is part of GNU Guix.
 ;;;
@@ -37,13 +39,22 @@
  #:use-module (guix packages)
  #:use-module (guix download)
  #:use-module (guix git-download)
+  #:use-module (guix build-system meson)
  #:use-module (guix build-system gnu)
  #:use-module ((guix licenses) #:prefix license:)
  #:use-module (gnu packages)
  #:use-module (gnu packages autotools)
+  #:use-module (gnu packages base)
  #:use-module (gnu packages compression)
+  #:use-module (gnu packages base)
+  #:use-module (gnu packages bash)
+  #:use-module (gnu packages dejagnu)
+  #:use-module (gnu packages digest)
+  #:use-module (gnu packages docbook)
  #:use-module (gnu packages documentation)
+  #:use-module (gnu packages gawk)
  #:use-module (gnu packages gcc)
+  #:use-module (gnu packages gdb)
  #:use-module (gnu packages m4)
  #:use-module (gnu packages pkg-config)
  #:use-module (gnu packages python)
@@ -75,6 +86,41 @@ dynamic library load path (RPATH and RUNPATH) of compiled programs and
 libraries.")
    (license license:gpl2+)))

+(define-public dwz
+  (package
+    (name "dwz")
+    (version "0.16")
+    (source (origin
+              (method url-fetch)
+              (uri (string-append "https://sourceware.org/ftp"
+                                  "/" name "/releases/" name "-"
+                                  version ".tar.gz"))
+              (sha256
+               (base32
+                "03nm4yz2sd23zmw65ingphg5gk619xx9r40a5p6dhvlynkhm6n27"))))
+    (build-system gnu-build-system)
+    (arguments
+     (list
+      #:make-flags #~(list (string-append "CC=" #$(cc-for-target))
+                           (string-append "CXX=" #$(cxx-for-target))
+                           (string-append "prefix=" #$output))))
+    (native-inputs
+     (list
+      ;; XXX: binutils-gold is a complete package that not only
+      ;; provides 'gold' but also 'ld', which shadows the
+      ;; regular 'ld' (ld-wrapper), causing breakage.
+      (make-ld-wrapper "ld-wrapper" #:binutils binutils)
+      binutils-gold
+      dejagnu
+      `(,elfutils "bin")                ;for eu-strip
+      gdb/pinned
+      pkg-config))
+    (inputs (list elfutils xxhash))
+    (synopsis "DWARF optimizer")
+    (description "DWZ is a DWARF optimization and duplicate removal tool.")
+    (home-page "https://sourceware.org/dwz")
+    (license license:gpl2+)))
+
 (define-public elfutils
  (package
    (name "elfutils")
@@ -391,6 +437,60 @@ changed.")
                (substitute* "tests/set-empty-rpath.sh"
                  (("^\\$\\{SCRATCH\\}\\/simple.$") ""))))))))))

+(define-public pax-utils
+  (package
+    (name "pax-utils")
+    (version "1.3.8")
+    (source (origin
+              (method git-fetch)
+              (uri (git-reference
+                     (url "https://anongit.gentoo.org/git/proj/pax-utils.git")
+                     (commit (string-append "v" version))))
+              (file-name (git-file-name name version))
+              (sha256
+               (base32
+                "1vxklqnabhy15idrg5s2m07lk1hqyf9fnvsfy66n2rdmqijn5rvw"))))
+    (build-system meson-build-system)
+    (arguments
+     (list
+      #:modules '((guix build meson-build-system)
+                  (guix build utils)
+                  (srfi srfi-26))
+      #:configure-flags #~(list "-Dlddtree_implementation=sh")
+      #:phases
+      #~(modify-phases %standard-phases
+          (add-after 'install 'wrap-lddtree
+            (lambda* (#:key inputs outputs #:allow-other-keys)
+              (let* ((needed-bin
+                      (map (cut string-append <> "/bin")
+                           (list #$(this-package-input "coreutils-minimal")
+                                 #$(this-package-input "gawk")
+                                 #$(this-package-input "sed")
+                                 #$output)))
+                     (PATH `("PATH" = (,@needed-bin))))
+                (for-each (lambda (p)
+                            (wrap-program
+                                (search-input-file outputs
+                                                   (string-append "bin/" p))
+                              PATH))
+                          (list "lddtree" "symtree"))))))))
+    (native-inputs (list docbook-xsl xmlto))
+    (inputs (list bash-minimal coreutils-minimal gawk sed))
+    (home-page "https://wiki.gentoo.org/wiki/Hardened/PaX_Utilities")
+    (synopsis "ELF integrity and security-focused utils")
+    (description "The pax-utils package contains a small set of utilities
+for performing mostly security checks on systems.  It is focused on the ELF
+format.  The included utilities are:
+@table @command
+@item pspax List ELF/PaX information about running processes
+@item scanelf Scan ELF binaries
+@item dumpelf Dump internal ELF structure
+@item scanmacho Scan Mach-O binaries
+@item symtree Display libraries that satisfy undefined symbols, as a tree
+@item lddtree Display ELF dependencies as a tree.
+@end table")
+    (license license:gpl2+)))
+
 (define-public libdwarf
  (package
    (name "libdwarf")
@@ -174,8 +174,8 @@ such as @command{elm make} and @command{elm repl}.")
    (license license:bsd-3)))

 ;; The 'elm' package used to be called 'elm-compiler'.
-(define-public elm-compiler
-  (deprecated-package "elm-compiler" elm))
+(define-deprecated-package elm-compiler
+  elm)

 (define-public elm-core
  (package
@@ -9,7 +9,7 @@
 ;;; Copyright © 2016 David Thompson <dthompson2@worcester.edu>
 ;;; Copyright © 2016 Nikita <nikita@n0.is>
 ;;; Copyright © 2017 Marius Bakke <mbakke@fastmail.com>
-;;; Copyright © 2017, 2019, 2020, 2023, 2024 Maxim Cournoyer <maxim@guixotic.coop>
+;;; Copyright © 2017, 2019, 2020, 2023-2025 Maxim Cournoyer <maxim@guixotic.coop>
 ;;; Copyright © 2017 Alex Vong <alexvong1995@gmail.com>
 ;;; Copyright © 2017, 2018 Ricardo Wurmus <rekado@elephly.net>
 ;;; Copyright © 2017, 2023, 2024, 2025 Janneke Nieuwenhuizen <janneke@gnu.org>
@@ -384,7 +384,8 @@
                       ,(map dirname
                             (list (search-input-file inputs "/bin/gzip")
                                   ;; for coreutils
-                                   (search-input-file inputs "/bin/yes"))))
+                                   (search-input-file inputs "/bin/yes")
+                                   (search-input-file inputs "/bin/zstd"))))
                     `("EMACSLOADPATH" suffix ,lisp-dirs)))
                 (find-files (string-append out "/bin")
                             ;; Matches versioned and unversioned emacs binaries.
@@ -402,7 +403,7 @@
                (copy-file
                 (car (find-files "bin" "^emacs-([0-9]+\\.)+[0-9]+$"))
                 "bin/emacs")))))))
-    (inputs (list bash-minimal coreutils findutils gawk gzip ncurses sed))
+    (inputs (list bash-minimal coreutils findutils gawk gzip ncurses sed zstd))
    (native-inputs (list autoconf libfaketime pkg-config texinfo))
    (home-page "https://www.gnu.org/software/emacs/")
    (synopsis "The extensible text editor (minimal build for byte-compilation)")
@@ -711,8 +712,8 @@ editor (with wide ints)" )
 (define-public emacs-next (emacs->emacs-next emacs))
 (define-public emacs-next-pgtk (emacs->emacs-next emacs-pgtk))
 (define-public emacs-next-pgtk-xwidgets (emacs->emacs-next emacs-pgtk-xwidgets))
-(define-public emacs-next-tree-sitter
-  (deprecated-package "emacs-next-tree-sitter" emacs-next))
+(define-deprecated-package emacs-next-tree-sitter
+  emacs-next)

 (define-public guile-emacs
  (let ((upstream-version "31.0.50")
@@ -42,6 +42,7 @@
  #:use-module ((guix licenses) #:prefix license:)
  #:use-module (guix build-system cmake)
  #:use-module (guix build-system gnu)
+  #:use-module (guix build-system pyproject)
  #:use-module (guix build-system python)
  #:use-module (guix build-system trivial)
  #:use-module ((guix build utils) #:select (alist-replace delete-file-recursively))
@@ -1753,29 +1754,45 @@ raw USB commands.")
 (define-public west
  (package
    (name "west")
-    (version "0.13.1")
+    (version "1.5.0")
    (source
     (origin
-       (method url-fetch)
-       (uri (pypi-uri "west" version))
+       (method git-fetch)
+       (uri (git-reference
+             (url "https://github.com/zephyrproject-rtos/west")
+             (commit (string-append "v" version))))
+       (file-name (git-file-name name version))
       (sha256
-        (base32
-         "1hw9qas8ry8prn24iqka8kw2nv7ndxr95mvwr5lww53w2sr7p807"))))
+        (base32 "0fa3bbw69khw8la4mi4q18d8brixywwj5yby7dh36hd40wxspzk3"))))
+    (build-system pyproject-build-system)
+    (arguments
+     (list
+      #:test-flags
+      ;; XXX: This test tries to access the network.
+      #~(list "-k" "not test_init_with_clone_option_depth_one")
+      #:phases
+      #~(modify-phases %standard-phases
+          (add-before 'check 'configure-tests
+            (lambda _
+              (setenv "TOXTEMPDIR"
+                      (mkdtemp
+                       (string-append (dirname (getcwd)) "/tmpXXXXXX"))))))))
    (propagated-inputs
     (list python-colorama
           python-packaging
           python-pykwalify
           python-pyyaml))
-    (build-system python-build-system)
+    (native-inputs (list git-minimal python-pytest python-setuptools))
    (home-page "https://github.com/zephyrproject-rtos/west")
    (synopsis "Zephyr RTOS Project meta-tool")
-    (description "West is the swiss-army knife command line tool of the Zephyr
-project.  Its built-in commands provide a multiple repository management
-system with features inspired by Google’s Repo tool and Git submodules.  West
-simplifies configuration and is also pluggable: you can write your own west
-\"extension commands\" which add additional features to west.  Zephyr uses
-this feature to provide conveniences for building applications, flashing and
-debugging them, and more.")
+    (description
+     "West is the swiss-army knife command line tool of the Zephyr project.
+Its built-in commands provide a multiple repository management system with
+features inspired by Google’s Repo tool and Git submodules.  West simplifies
+configuration and is also pluggable: you can write your own west \"extension
+commands\" which add additional features to west.  Zephyr uses this feature to
+provide conveniences for building applications, flashing and debugging them,
+and more.")
    (license license:expat)))

 (define-public ebusd
@@ -69,6 +69,7 @@
  #:use-module (gnu packages cmake)
  #:use-module (gnu packages compression)
  #:use-module (gnu packages containers)
+  #:use-module (gnu packages cpp)
  #:use-module (gnu packages cross-base)
  #:use-module (gnu packages curl)
  #:use-module (gnu packages digest)
@@ -94,12 +95,14 @@
  #:use-module (gnu packages libedit)
  #:use-module (gnu packages libusb)
  #:use-module (gnu packages linux)
+  #:use-module (gnu packages llvm)
  #:use-module (gnu packages lua)
  #:use-module (gnu packages maths)
  #:use-module (gnu packages mp3)
  #:use-module (gnu packages music)
  #:use-module (gnu packages ncurses)
  #:use-module (gnu packages networking)
+  #:use-module (gnu packages ninja)
  #:use-module (gnu packages pkg-config)
  #:use-module (gnu packages pretty-print)
  #:use-module (gnu packages pulseaudio)
@@ -795,7 +798,7 @@ older games.")
  ;; This is not a patch staging area for DOSBox, but an unaffiliated fork.
  (package
    (name "dosbox-staging")
-    (version "0.82.0")
+    (version "0.82.2")
    (source
     (origin
       (method git-fetch)
@@ -804,7 +807,7 @@ older games.")
             (commit (string-append "v" version))))
       (file-name (git-file-name name version))
       (sha256
-        (base32 "1s4c6fiyjm91dnmkval9fvsqszc6yjq5b6pq895xi606dn29b85d"))))
+        (base32 "074wrkmy2g280kipnnkh2ga6wlh94kgwfp2cl1g17y65y56vmmdv"))))
    (build-system meson-build-system)
    (arguments
     ;; XXX: When build with debugoptimized, some assertions and tests will
@@ -858,7 +861,7 @@ emulate a serial nullmodem over TCP/IP.")
 (define-public qtmips
  (package
    (name "qtmips")
-    (version "0.7.5")
+    (version "0.8.1")
    (source (origin
              (method git-fetch)
              (uri (git-reference
@@ -867,47 +870,8 @@ emulate a serial nullmodem over TCP/IP.")
              (file-name (git-file-name name version))
              (sha256
               (base32
-                "1fal7a8y5g0rqqjrk795jh1l50ihz01ppjnrfjrk9vkjbd59szbp"))))
+                "1gmlr43wjq0fki9d77n7s6jly4n6kd6hq2af0zni348b4a4qn8bn"))))
    (build-system qt-build-system)
-    (arguments
-     (list
-      #:modules '((guix build qt-build-system)
-                  ((guix build gnu-build-system) #:prefix gnu:)
-                  (guix build utils))
-      #:phases
-      #~(modify-phases %standard-phases
-          (replace 'configure
-            (lambda* (#:key outputs #:allow-other-keys)
-              (invoke "qmake"
-                      (string-append "PREFIX=" (assoc-ref outputs "out"))
-                      "qtmips.pro")))
-          (replace 'build (assoc-ref gnu:%standard-phases 'build))
-          (replace 'check
-            (lambda* (#:key tests? #:allow-other-keys)
-              (substitute* "tests/test.sh"
-                (("qtchooser.*") ""))
-              (substitute* '("tests/cpu_trap/test.sh"
-                             "tests/registers/test.sh")
-                (("sub-qtmips_cli") "qtmips_cli"))
-              (if tests?
-                (invoke "tests/run-all.sh")
-                #t)))
-          (replace 'install
-            ;; There is no install target.
-            (lambda* (#:key outputs #:allow-other-keys)
-              (let* ((out (assoc-ref outputs "out"))
-                     (bin (string-append out "/bin"))
-                     (apps (string-append out "/share/applications"))
-                     (icons (string-append out "/share/icons/hicolor")))
-                (install-file "qtmips_gui/qtmips_gui" bin)
-                (install-file "qtmips_cli/qtmips_cli" bin)
-                (install-file "data/qtmips.desktop" apps)
-                (install-file "data/icons/qtmips_gui.svg"
-                              (string-append icons "/scalable/apps"))
-                (install-file "data/icons/qtmips_gui.png"
-                              (string-append icons "/48x48/apps"))
-                #t))))
-        #:tests? #f))    ; test suite wants mips toolchain
    (inputs
     (list elfutils qtbase-5 qtwayland-5))
    (home-page "https://github.com/cvut/QtMips")
@@ -2078,8 +2042,8 @@ metadata about each known libretro core.  The snapshot is taken from the
@url{https://github.com/libretro/libretro-super, libretro-super} repository.")
    (license license:expat)))

-(define-public retroarch-core-info
-  (deprecated-package "retroarch-core-info" libretro-core-info))
+(define-deprecated-package retroarch-core-info
+  libretro-core-info)

 (define-public libretro-database
  (package
@@ -3626,6 +3590,137 @@ assembler, and debugger for the Intel 8085 microprocessor.
 improvements.")
      (license license:gpl2+))))

+(define-public pcsx2-patches
+  (let ((commit "2fdc835f0725b318efcdaae84db1c73a9139b6f6")
+        (revision "0"))
+    (package
+      (name "pcsx2-patches")
+      (version (git-version "2025.10.24" revision commit))
+      (source
+       (origin
+         (method git-fetch)
+         (uri (git-reference
+	       (url "https://github.com/PCSX2/pcsx2_patches")
+	       (commit commit)))
+         (file-name (git-file-name name version))
+         (sha256
+          (base32 "0qn9jwk983hxzrf2x550wcb9l782618lm662w5fb6cw81bbrv5is"))))
+      (build-system copy-build-system)
+      (arguments
+       (list
+        #:phases
+        #~(modify-phases %standard-phases
+	    (add-before 'install 'compress
+	      (lambda _
+                (with-directory-excursion "patches"
+                  (apply invoke "7z" "a" "-r" "patches.zip"
+                         (find-files "."))))))
+        #:install-plan #~(list '("patches/patches.zip" "patches.zip"))))
+      (native-inputs (list 7zip))
+      (home-page "https://github.com/PCSX2/pcsx2_patches")
+      (synopsis "PCSX2 widescreen and de-interlacing patches")
+      (description "This package provides game-specific widescreen and
+de-interlacing patches for use with PCSX2.")
+      (license license:gpl3+))))           ;same as pcsx2
+
+(define-public pcsx2
+  (package
+    (name "pcsx2")
+    (version "2.4.0")
+    (source
+     (origin
+       (method git-fetch)
+       (uri (git-reference
+             (url "https://github.com/PCSX2/pcsx2")
+             (commit (string-append "v" version))))
+       (file-name (git-file-name name version))
+       (sha256
+        (base32 "0nr53cjifqwnz3icxsj01yd3aw1vfsfxga4zz5zi8aqr175mvq27"))
+       (modules '((guix build utils)))
+       (snippet
+        #~(begin
+            (substitute* "pcsx2/Pcsx2Config.cpp"
+	      (("Path::Canonicalize\\(Path::GetDirectory\\(program_path\\)\\);")
+	       "Path::Canonicalize(
+((std::string)Path::GetDirectory(program_path)).append(\"/../share/\"));"))
+            (delete-file-recursively "3rdparty/d3d12memalloc")
+            (delete-file-recursively "3rdparty/winpixeventruntime")
+            (delete-file-recursively "3rdparty/winwil")))))
+    (build-system cmake-build-system)
+    (arguments
+     (list
+      #:parallel-build? #t
+      #:configure-flags
+      #~(list "-DCMAKE_C_COMPILER=clang"
+              "-DCMAKE_CXX_COMPILER=clang++"
+              "-DCMAKE_PREFIX_PATH=\"$PWD/deps\""
+              "-GNinja")
+      #:imported-modules `((guix build copy-build-system)
+                           ,@%cmake-build-system-modules)
+      #:phases
+      #~(modify-phases %standard-phases
+          (replace 'build
+            (lambda _
+              (invoke "ninja" "-j" (number->string (parallel-job-count)))))
+          (replace 'check
+            (lambda* (#:key tests? #:allow-other-keys)
+              (when tests? (invoke "ninja" "unittests"))))
+          (replace 'install
+            (lambda* args
+              (apply
+               (assoc-ref (@ (guix build copy-build-system) %standard-phases)
+                          'install)
+               #:install-plan
+               '(("bin/pcsx2-qt" "bin/")
+                 ("bin/resources" "share/")
+                 ("bin/translations" "share/")
+                 ("../source/.github/workflows/scripts/linux/pcsx2-qt.desktop"
+                  "share/applications/"))
+               args)))
+          (add-after 'install 'install-patches
+            (lambda* (#:key inputs #:allow-other-keys)
+              (install-file (search-input-file %build-inputs "/patches.zip")
+                            (string-append #$output "/share/resources")))))))
+    (inputs (list (module-ref
+                   (resolve-interface '(gnu packages debug)) 'libbacktrace)
+                  `(,zstd "lib")
+                  curl
+                  dbus
+                  eudev
+                  ffmpeg
+                  freetype
+                  kddockwidgets
+                  libaio
+                  libjpeg-turbo
+                  libpcap
+                  libpng-for-pcsx2
+                  libwebp
+                  libxrandr
+                  lz4
+                  pcsx2-patches
+                  plutovg
+                  plutosvg
+                  qtbase
+                  qtdeclarative
+                  qtsvg
+                  qttools
+                  qtwayland
+                  sdl3
+                  shaderc
+                  vulkan-headers
+                  wayland
+                  libxi))
+    (native-inputs (list clang-17 extra-cmake-modules ninja pkg-config))
+    (home-page "https://pcsx2.net")
+    (synopsis "PlayStation 2 (PS2) emulator")
+    (description
+     "PCSX2 is a free and open-source PlayStation 2 (PS2)
+emulator.  Its purpose is to emulate the PS2's hardware, using a combination
+of MIPS CPU interpreters, recompilers and a virtual machine which manages
+hardware states and PS2 system memory.  This allows you to play PS2 games on
+your PC, with many additional features and benefits.")
+    (license license:gpl3+)))
+
 (define-public gens-gs
  (package
    (name "gens-gs")
@@ -4653,14 +4748,14 @@ device contains a @code{exec} port to interface with the host system.")
       (sha256
        (base32 "1xahdr6bh3dw5swrc2r8kqa8ljhqlb7k2kxv5mrw5rhcmcnzcyig"))))
    (build-system pyproject-build-system)
-    (arguments
-     (list #:tests? #f)) ;no tests in PyPI archive
+    ;; Tests either require kstool, or Python 2, or are 10 years old and fail.
+    (arguments (list #:tests? #f))          ; no tests
    (native-inputs
     (list cmake-minimal
-           python-setuptools
-           python-wheel))
+           python-setuptools))
    (home-page "https://www.keystone-engine.org")
-    (synopsis "Lightweight multi-platform, multi-architecture assembler framework")
+    (synopsis
+     "Lightweight multi-platform, multi-architecture assembler framework")
    (description
     "Keystone is a lightweight multi-platform, multi-architecture
 assembler framework.  It supports a wide-range of different architectures
@@ -105,6 +105,7 @@
  #:use-module (gnu packages digest)
  #:use-module (gnu packages docbook)
  #:use-module (gnu packages documentation)
+  #:use-module (gnu packages electronics)
  #:use-module (gnu packages emacs-build)
  #:use-module (gnu packages emacs-xyz)
  #:use-module (gnu packages file)
@@ -721,12 +722,21 @@ multipole-accelerated algorithm.")
             (commit version)))
       (file-name (git-file-name name version))
       (sha256
-        (base32 "083nz7vj7a334575smjry6257535h68gglh8a381xxa36dw96aqs"))))
+        (base32 "083nz7vj7a334575smjry6257535h68gglh8a381xxa36dw96aqs"))
+       (patches (search-patches "fritzing-0.9.6-fix-types.patch"))))
    (build-system gnu-build-system)
    (arguments
     (list
      #:phases
      #~(modify-phases %standard-phases
+          (add-after 'unpack 'patch-files
+            (lambda _
+              ;; Trick the internal mechanism to load the parts
+              (substitute* "src/version/partschecker.cpp"
+                ((".*git_libgit2_init.*")
+                 "return \"083nz7vj7a334575smjry6257535h68gglh8a381xxa36dw96aqs\";"))
+              (substitute* "src/utils/textutils.cpp"
+                (("QUuid::createUuid\\(\\)") "QUuid()"))))
          (replace 'configure
            (lambda _
              ;; Integrate parts library
@@ -743,17 +753,22 @@ multipole-accelerated algorithm.")
                  "INCLUDEPATH += $$LIBGIT2INCLUDE\n"
                  "LIBS += -L$$LIBGIT2LIB -lgit2\n"))
                (("^.*pri/libgit2detect.pri.") ""))
-              ;; Trick the internal mechanism to load the parts
-              (substitute* "src/version/partschecker.cpp"
-                ((".*git_libgit2_init.*")
-                 "return \"083nz7vj7a334575smjry6257535h68gglh8a381xxa36dw96aqs\";"))
-              ;; XXX: NixOS and Gento have a phase where they generate part
-              ;; SQLite library, have proper investigation if it's required in
-              ;; Guix as well.
              (invoke "qmake"
                      (string-append "QMAKE_LFLAGS_RPATH=-Wl,-rpath," #$output "/lib")
                      (string-append "PREFIX=" #$output)
-                      "phoenix.pro"))))))
+                      "phoenix.pro")))
+          (add-after 'install 'generate-parts-db
+            (lambda* (#:key outputs #:allow-other-keys)
+              (let ((out (assoc-ref outputs "out"))
+                    (env-qt-qpa-platform (getenv "QT_QPA_PLATFORM"))
+                    (env-qt-hash-seed (getenv "QT_HASH_SEED")))
+                (setenv "QT_QPA_PLATFORM" "offscreen")
+                (setenv "QT_HASH_SEED" "0")
+                (invoke (string-append out "/bin/Fritzing")
+                        "-db" (string-append out "/share/fritzing/parts/parts.db")
+                        "-folder" (string-append out "/share/fritzing"))
+                (setenv "QT_QPA_PLATFORM" env-qt-qpa-platform)
+                (setenv "QT_HASH_SEED" env-qt-hash-seed)))))))
    (native-inputs
     (list fritzing-parts))
    (inputs
@@ -1166,24 +1181,32 @@ Emacs).")
                 `("PATH" ":" prefix
                   (,(string-append python "/bin:"))))))))))
    (native-search-paths
+     ;; Currently, KiCad environment variables are single-valued
+     ;; (see https://gitlab.com/kicad/code/kicad/-/issues/14792).
     (list (search-path-specification
            (variable "KICAD") ;to find kicad-doc
-            (files '("")))
+            (files '(""))
+            (separator #f))
           (search-path-specification
            (variable "KICAD9_TEMPLATE_DIR")
-            (files '("share/kicad/template")))
+            (files '("share/kicad/template"))
+            (separator #f))
           (search-path-specification
            (variable "KICAD9_SYMBOL_DIR")
-            (files '("share/kicad/symbols")))
+            (files '("share/kicad/symbols"))
+            (separator #f))
           (search-path-specification
            (variable "KICAD9_FOOTPRINT_DIR")
-            (files '("share/kicad/footprints")))
+            (files '("share/kicad/footprints"))
+            (separator #f))
           (search-path-specification
            (variable "KICAD9_3DMODEL_DIR")
-            (files '("share/kicad/3dmodels")))
+            (files '("share/kicad/3dmodels"))
+            (separator #f))
           (search-path-specification
            (variable "KICAD_STOCK_DATA_HOME")
-            (files '("share/kicad")))))
+            (files '("share/kicad"))
+            (separator #f))))
    (native-inputs (list boost
                         desktop-file-utils
                         gettext-minimal
@@ -1703,7 +1726,7 @@ or an Ethernet connection.")
 (define-public harminv
  (package
    (name "harminv")
-    (version "1.4.1")
+    (version "1.4.2")
    (source (origin
              (method url-fetch)
              (uri
@@ -1712,7 +1735,7 @@ or an Ethernet connection.")
                              name "-" version ".tar.gz"))
              (sha256
               (base32
-                "0w1n4d249vlpda0hi6z1v13qp21vlbp3ykn0m8qg4rd5132j7fg1"))))
+                "18n71d3wj0jnldh72vb9lfj3vv64s1i2rmnhcpq4494p23vip6js"))))
    (build-system gnu-build-system)
    (arguments
     `(#:configure-flags '("--enable-shared")
@@ -1783,7 +1806,17 @@ for scientific simulations.")
       (list (string-append "--with-libctl="
                            (assoc-ref %build-inputs "libctl")
                            "/share/libctl")
-             "--enable-shared")))
+             "--enable-shared")
+       #:phases
+       (modify-phases %standard-phases
+         (add-before 'configure 'relax-gcc-14-strictness
+           (lambda _
+             (setenv "CFLAGS"
+                     (string-join
+                      (list "-Wno-error=incompatible-pointer-types"
+                            "-Wno-error=implicit-function-declaration"
+                            "-Wno-error=int-conversion")
+                      " ")))))))
    (native-inputs
     `(("fortran" ,gfortran)
       ("pkg-config" ,pkg-config)
@@ -2234,6 +2267,15 @@ and a fallback for environments without libc for Zydis.")
       #:phases
       (modify-phases %standard-phases
         (delete 'configure)
+         (add-before 'build 'relax-gcc-14-strictness
+           (lambda _
+             (substitute* (find-files "." "Makefile")
+               (("CFLAGS = (.*)$" all options)
+                (string-append "CFLAGS = "
+                               " -Wno-error=incompatible-pointer-types"
+                               " -Wno-error=implicit-function-declaration"
+                               " "
+                               options)))))
         (add-before 'build 'fix-paths
           (lambda* (#:key inputs #:allow-other-keys)
             (let ((coreutils (assoc-ref inputs "coreutils-minimal")))
@@ -2263,212 +2305,6 @@ and a fallback for environments without libc for Zydis.")
 high-performance parallel differential evolution (DE) optimization algorithm.")
    (license license:gpl2+)))

-(define-public libngspice
-  ;; Note: The ngspice's build system does not allow us to build both the
-  ;; library and the executables in one go.  Thus, we have two packages.
-  ;; See <https://debbugs.gnu.org/cgi/bugreport.cgi?bug=27344#236>.
-  (package
-    (name "libngspice")
-    (version "44.2")
-    (source
-     (origin
-       (method git-fetch)
-       (uri (git-reference
-              (url "https://git.code.sf.net/p/ngspice/ngspice")
-              (commit (string-append "ngspice-" version))))
-       (file-name (git-file-name name version))
-       (sha256
-        (base32 "1vp27149kx8l7397bv5p708jqph1kma8rb9bl7ckgmbr9sw9cn3q"))))
-    (build-system gnu-build-system)
-    (arguments
-     (list
-      #:tests? #f ;there are no tests for libngspice
-      #:phases #~(modify-phases %standard-phases
-                   (add-after 'install 'delete-scripts
-                     (lambda _
-                       (delete-file-recursively
-                        (string-append #$output
-                                       "/share/ngspice/scripts")))))
-      #:configure-flags #~(list "--enable-openmp" "--enable-cider"
-                                "--enable-xspice" "--with-ngshared")))
-    (native-inputs (list autoconf automake bison flex libtool))
-    (inputs (list openmpi))
-    (home-page "https://ngspice.sourceforge.io/")
-    (synopsis "Mixed-level/mixed-signal circuit simulator")
-    (description
-     "Ngspice is a mixed-level/mixed-signal circuit simulator.  It includes
-@code{Spice3f5}, a circuit simulator, and @code{Xspice}, an extension that
-provides code modeling support and simulation of digital components through
-an embedded event driven algorithm.")
-    (license (list license:lgpl2.0+ ;code in frontend/numparam
-                   (license:non-copyleft "file:///COPYING") ;spice3 bsd-style
-                   license:bsd-3 ;ciderlib
-                   license:public-domain)))) ;xspice
-
-(define-public ngspice
-  ;; The ngspice executables (see libngpsice above.)
-  (package
-    (inherit libngspice)
-    (name "ngspice")
-    (arguments
-     (substitute-keyword-arguments (package-arguments libngspice)
-       ;; Tests require a X server running, so we keep them disabled
-       ((#:configure-flags flags)
-        #~(cons*  "--enable-rpath" "--with-x" "--with-readline=yes"
-                 (delete "--with-ngshared" #$flags)))
-       ((#:phases phases)
-        #~(modify-phases #$phases
-            (delete 'delete-scripts)))))
-    (native-inputs
-     (modify-inputs (package-native-inputs libngspice)
-       (append perl)))
-    (inputs (list libngspice readline libxaw libx11))))
-
-(define trilinos-serial-xyce
-  ;; Note: This is a Trilinos containing only the packages Xyce needs, so we
-  ;; keep it private.  See
-  ;; <https://debbugs.gnu.org/cgi/bugreport.cgi?bug=27344#248>.
-  ;; TODO: Remove when we have modular Trilinos packages?
-  (package
-    (name "trilinos-serial-xyce")
-    (version "12.12.1")
-    (source
-     (origin
-       (method git-fetch)
-       (uri (git-reference
-             (url "https://github.com/trilinos/Trilinos")
-             (commit (string-append "trilinos-release-"
-                                    (string-map (lambda (chr)
-                                                  (case chr
-                                                    ((#\.) #\-)
-                                                    (else chr)))
-                                                version)))))
-       (file-name (git-file-name name version))
-       (sha256
-        (base32
-         "1smz3wlpfyjn0czmpl8bj4hw33p1zi9nnfygpsx7jl1523nypa1n"))))
-    (build-system cmake-build-system)
-    (arguments
-     `(#:out-of-source? #t
-       #:phases
-       (modify-phases %standard-phases
-         ;; Delete unneeded tribits(build system) directory which makes validate-runpath
-         ;; phase to fail.
-         (add-before 'validate-runpath 'delete-tribits
-           (lambda* (#:key outputs #:allow-other-keys)
-             (delete-file-recursively
-              (string-append (assoc-ref outputs "out")
-                             "/lib/cmake/tribits")))))
-       #:configure-flags
-       (list "-DCMAKE_CXX_FLAGS=-O3 -fPIC"
-             "-DCMAKE_C_FLAGS=-O3 -fPIC"
-             "-DCMAKE_Fortran_FLAGS=-O3 -fPIC"
-             "-DTrilinos_ENABLE_NOX=ON"
-             "-DNOX_ENABLE_LOCA=ON"
-             "-DTrilinos_ENABLE_EpetraExt=ON"
-             "-DEpetraExt_BUILD_BTF=ON"
-             "-DEpetraExt_BUILD_EXPERIMENTAL=ON"
-             "-DEpetraExt_BUILD_GRAPH_REORDERINGS=ON"
-             "-DTrilinos_ENABLE_TrilinosCouplings=ON"
-             "-DTrilinos_ENABLE_Ifpack=ON"
-             "-DTrilinos_ENABLE_Isorropia=ON"
-             "-DTrilinos_ENABLE_AztecOO=ON"
-             "-DTrilinos_ENABLE_Belos=ON"
-             "-DTrilinos_ENABLE_Teuchos=ON"
-             "-DTeuchos_ENABLE_COMPLEX=ON"
-             "-DTrilinos_ENABLE_Amesos=ON"
-             "-DAmesos_ENABLE_KLU=ON"
-             "-DAmesos_ENABLE_UMFPACK=ON"
-             "-DTrilinos_ENABLE_Sacado=ON"
-             "-DTrilinos_ENABLE_Kokkos=OFF"
-             "-DTrilinos_ENABLE_ALL_OPTIONAL_PACKAGES=OFF"
-             "-DTPL_ENABLE_AMD=ON"
-             "-DTPL_ENABLE_UMFPACK=ON"
-             "-DTPL_ENABLE_BLAS=ON"
-             "-DTPL_ENABLE_LAPACK=ON")))
-    (native-inputs (list gfortran swig))
-    (inputs (list boost lapack suitesparse))
-    (home-page "https://trilinos.org")
-    (synopsis "Engineering and scientific problems algorithms")
-    (description
-     "The Trilinos Project is an effort to develop algorithms and enabling
-technologies within an object-oriented software framework for the solution of
-large-scale, complex multi-physics engineering and scientific problems.  A
-unique design feature of Trilinos is its focus on packages.")
-    (license (list license:lgpl2.1+
-                   license:bsd-3))))
-
-(define-public xyce-serial
-  (package
-    (name "xyce-serial")
-    (version "6.8")
-    (source
-     (origin (method url-fetch)
-             (uri (string-append "https://archive.org/download/Xyce-"
-                                 version "/Xyce-" version ".tar.gz"))
-             (sha256
-              (base32
-               "09flp1xywbb2laayd9rg8vd0fjsh115y6k1p71jacy0nrbdvvlcg"))))
-    (build-system gnu-build-system)
-    (arguments
-     `(#:tests? #f
-       #:configure-flags
-       (list
-        "CXXFLAGS=-O3"
-        (string-append "ARCHDIR="
-                       (assoc-ref %build-inputs "trilinos")))))
-    (native-inputs
-     `(("bison" ,bison-3.0)                  ;'configure' fails with Bison 3.4
-       ("flex" ,flex)
-       ("fortran" ,gfortran)))
-    (inputs
-     `(("fftw" ,fftw)
-       ("suitesparse" ,suitesparse)
-       ("lapack" ,lapack)
-       ("trilinos" ,trilinos-serial-xyce)))
-    (home-page "https://xyce.sandia.gov/")
-    (synopsis "High-performance analog circuit simulator")
-    (description
-     "Xyce is a SPICE-compatible, high-performance analog circuit simulator,
-capable of solving extremely large circuit problems by supporting large-scale
-parallel computing platforms.  It also supports serial execution.")
-    (license license:gpl3+)))
-
-(define trilinos-parallel-xyce
-  (package (inherit trilinos-serial-xyce)
-    (name "trilinos-parallel-xyce")
-    (arguments
-     `(,@(substitute-keyword-arguments (package-arguments trilinos-serial-xyce)
-           ((#:configure-flags flags)
-            `(append (list "-DTrilinos_ENABLE_ShyLU=ON"
-                           "-DTrilinos_ENABLE_Zoltan=ON"
-                           "-DTPL_ENABLE_MPI=ON")
-                     ,flags)))))
-    (inputs
-     `(("mpi" ,openmpi)
-       ,@(package-inputs trilinos-serial-xyce)))))
-
-(define-public xyce-parallel
-  (package (inherit xyce-serial)
-    (name "xyce-parallel")
-    (arguments
-     `(,@(substitute-keyword-arguments (package-arguments xyce-serial)
-           ((#:configure-flags flags)
-            `(list "CXXFLAGS=-O3"
-                   "CXX=mpiCC"
-                   "CC=mpicc"
-                   "F77=mpif77"
-                   "--enable-mpi"
-                   (string-append
-                    "ARCHDIR="
-                    (assoc-ref %build-inputs "trilinos")))))))
-    (propagated-inputs
-     `(("mpi" ,openmpi)))
-    (inputs
-     `(("trilinos" ,trilinos-parallel-xyce)
-       ,@(alist-delete "trilinos"
-                       (package-inputs xyce-serial))))))
-
 (define-public librepcb
  (package
    (name "librepcb")
@@ -3252,7 +3088,7 @@ but also adds new features and improves existing ones.")
 (define-public emacs-scad-mode
  (package
    (name "emacs-scad-mode")
-    (version "96.0")
+    (version "97.0")
    (source
     (origin
       (method git-fetch)
@@ -3260,7 +3096,7 @@ but also adds new features and improves existing ones.")
             (url "https://github.com/openscad/emacs-scad-mode")
             (commit version)))
       (sha256
-        (base32 "0vsidz3qws89z8blq5nng7mvzn3kj06lw9417aymhykyjgjn5f8m"))
+        (base32 "1h86z2qn9q7ww2m7p992fx8abzdffcd3bcp3bmck3c9q2aksjl5j"))
       (file-name (git-file-name name version))))
    (build-system emacs-build-system)
    (propagated-inputs (list emacs-compat))
@@ -3838,6 +3674,10 @@ program that can perform mesh processing tasks in batch mode, without a GUI.")
                             "/share/vim/vimfiles/pack/guix/start/poke")
              (string-append "--with-lispdir="
                             (emacs:elpa-directory #$output)))))
+    (native-search-paths
+     (list (search-path-specification
+             (variable "POKE_LOAD_PATH")
+             (files '("share/poke/pickles")))))
    (home-page "https://www.gnu.org/software/poke/#documentation")
    (synopsis "Editing of arbitrary binary data")
    (description "GNU poke is an interactive, extensible editor for binary data.
@@ -3846,10 +3686,30 @@ full-fledged procedural, interactive programming language designed to describe
 data structures and to operate on them.")
    (license license:gpl3+)))

-(define-public emacs-poke
-  ;; The 'emacs-poke' name may eventually refer to 'poke' from ELPA, which is
-  ;; a different beast.
-  (deprecated-package "emacs-poke" poke))
+(define-public poke-elf
+  (package
+    (name "poke-elf")
+    (version "1.0")
+    (source (origin
+              (method url-fetch)
+              (uri (string-append "mirror://gnu/poke/poke-elf-" version
+                                  ".tar.gz"))
+              (sha256
+               (base32
+                "0x3shih7sjj34f5305kvbp4cfy11m92zwidjk3658m23zkd6gdqa"))))
+    (build-system gnu-build-system)
+    (native-inputs (list poke))         ;for the test suite
+    (home-page "https://jemarch.net/poke-elf")
+    (synopsis "GNU poke pickle for ELF object files")
+    (description "@code{poke-elf} is a GNU poke pickle for editing ELF object files,
+executables, shared libraries and core dumps.  It supports many architectures
+and extensions.")
+    (license license:gpl3+)))
+
+;; The 'emacs-poke' name may eventually refer to 'poke' from ELPA, which is
+;; a different beast.
+(define-deprecated-package emacs-poke
+  poke)

 (define-public pcb2gcode
  ;; XXX: The latest release was on <2022-09-12>, but master branch contains a
@@ -443,47 +443,6 @@ embedded systems.")
 Libraries stack (eo, evas, ecore, edje, emotion, ethumb and elementary).")
    (license license:lgpl3)))

-(define-public edi
-  (package
-    (name "edi")
-    (version "0.8.0")
-    (source
-      (origin
-        (method url-fetch)
-        (uri (string-append "https://github.com/Enlightenment/edi/releases/"
-                            "download/v" version "/edi-" version ".tar.xz"))
-        (sha256
-         (base32
-          "01k8gp8r2wa6pyg3dkbm35m6hdsbss06hybghg0qjmd4mzswcd3a"))))
-    (build-system meson-build-system)
-    (arguments
-     '(#:phases
-       (modify-phases %standard-phases
-         (add-after 'unpack 'fix-clang-header
-           (lambda _
-             (substitute* "scripts/clang_include_dir.sh"
-               (("grep clang") "grep clang | head -n1"))
-             #t))
-         (add-after 'unpack 'set-home-directory
-           ;; FATAL: Cannot create run dir '/homeless-shelter/.run' - errno=2
-           (lambda _ (setenv "HOME" "/tmp") #t)))
-       #:tests? #f)) ; tests require running dbus service
-    (native-inputs
-     `(("check" ,check)
-       ("gettext" ,gettext-minimal)
-       ("pkg-config" ,pkg-config)))
-    (inputs
-     (list clang efl))
-    (home-page "https://www.enlightenment.org/about-edi")
-    (synopsis "Development environment for Enlightenment")
-    (description "EDI is a development environment designed for and built using
-the EFL.  It's aim is to create a new, native development environment for Linux
-that tries to lower the barrier to getting involved in Enlightenment development
-and in creating applications based on the Enlightenment Foundation Library suite.")
-    (license (list license:public-domain ; data/extra/skeleton
-                   license:gpl2          ; edi
-                   license:gpl3))))      ; data/extra/examples/images/mono-runtime.png
-
 (define-public ephoto
  (package
    (name "ephoto")
@@ -560,35 +519,3 @@ directories.
     "This is a process monitor and system monitor using the
@dfn{Enlightenment Foundation Libraries} (EFL).")
    (license license:bsd-2)))
-
-;; XXX: See: <https://codeberg.org/guix/guix/issues/3014>.
-(define-public epour
-  (package
-    (name "epour")
-    (version "0.7.0")
-    (source
-     (origin
-       (method url-fetch)
-       (uri (string-append "https://download.enlightenment.org/rel/apps/epour"
-             "/epour-" version ".tar.xz"))
-       (sha256
-        (base32 "0g9f9p01hsq6dcf4cs1pwq95g6fpkyjgwqlvdjk1km1i5gj5ygqw"))))
-    (build-system pyproject-build-system)
-    (arguments
-     (list
-      #:tests? #f ;no test target
-      #:phases
-      #~(modify-phases %standard-phases
-          (add-after 'unpack 'find-theme-dir
-            (lambda _
-              (substitute* "epour/gui/__init__.py"
-                (("join\\(data_path")
-                 (string-append "join(\"" #$output "/share/epour\""))))))))
-    (native-inputs (list intltool python-distutils-extra python-setuptools-67
-                         python-wheel-0.40))
-    (inputs (list libtorrent-rasterbar-1.2 python-dbus python-efl python-pyxdg))
-    (home-page "https://www.enlightenment.org")
-    (synopsis "EFL Bittorrent client")
-    (description "Epour is a BitTorrent client based on the @dfn{Enlightenment
-Foundation Libraries} (EFL) and rb-libtorrent.")
-    (license license:gpl3+)))
@@ -36,14 +36,14 @@
 (define-public entr
  (package
    (name "entr")
-    (version "5.6")
+    (version "5.7")
    (source
     (origin
       (method url-fetch)
       (uri (string-append "https://eradman.com/entrproject/code/entr-"
                           version ".tar.gz"))
       (sha256
-        (base32 "0kniklgnqv4j9carm78d3423wlwqw1ykxmlla4xmlfwdjbgvh8h2"))))
+        (base32 "0ryhylhd682m5cxz3zjyv5zxvxd4dqm3h6mlgvrwww0ch91xkich"))))
    (build-system gnu-build-system)
    (arguments
     `(#:test-target "test"
@@ -68,7 +68,7 @@
                         (search-input-file inputs command))
                        (("/usr(/bin/clear)" _ command)
                         (search-input-file inputs command))))))))
-    (inputs (list bash-minimal coreutils ncurses))
+    (inputs (list bash-minimal coreutils))
    (home-page "https://eradman.com/entrproject/")
    (synopsis "Run arbitrary commands when files change")
    (description
@@ -407,13 +407,13 @@ Server.")
 (define-public erlang-p1-acme
  (package
    (name "erlang-p1-acme")
-    (version "1.0.25")
+    (version "1.0.28")
    (source
     (origin
       (method url-fetch)
       (uri (hexpm-uri "p1_acme" version))
       (sha256
-        (base32 "136h8nkfd62xd76p8p4mgdiz8hxdqcg4arayl6c4znsx953mpdd7"))))
+        (base32 "08v4shjng4gdq6nffsvckhs9lcj5rcipbs5ghp95z79zvs36js6f"))))
    (build-system rebar-build-system)
    (inputs (list erlang-base64url erlang-idna erlang-jiffy erlang-jose
                  erlang-yconf))
@@ -450,13 +450,13 @@ Server.")
 (define-public erlang-p1-utils
  (package
    (name "erlang-p1-utils")
-    (version "1.0.26")
+    (version "1.0.28")
    (source
     (origin
       (method url-fetch)
       (uri (hexpm-uri "p1_utils" version))
       (sha256
-        (base32 "0k5hfqrjrvgh7gknqj5pzpra9k1g0bgc2ac19zb8pfan2669wdyh"))))
+        (base32 "0cq0gwd4vy51j1qq2c6p1i6nv98agvfjdy0sd6bdj2m4qi5x96y4"))))
    (build-system rebar-build-system)
    (synopsis "ProcessOne utility modules for Erlang")
    (description "This package provides ProcessOne utility modules for Erlang.")
@@ -466,13 +466,13 @@ Server.")
 (define-public erlang-p1-mysql
  (package
    (name "erlang-p1-mysql")
-    (version "1.0.25")
+    (version "1.0.26")
    (source
     (origin
       (method url-fetch)
       (uri (hexpm-uri "p1_mysql" version))
       (sha256
-        (base32 "0d7438sfzzh57d0fxq165k75khja6krfcglgx2c60wjvx7x7y676"))))
+        (base32 "1v7xz81wqx2c6ndl9rd3kq0v125209cbz7alrywijiy5ya1q04za"))))
    (build-system rebar-build-system)
    (synopsis "Pure Erlang MySQL driver")
    (description "This package provides pure Erlang @code{MySQL} driver.")
@@ -482,13 +482,13 @@ Server.")
 (define-public erlang-p1-pgsql
  (package
    (name "erlang-p1-pgsql")
-    (version "1.1.29")
+    (version "1.1.35")
    (source
     (origin
       (method url-fetch)
       (uri (hexpm-uri "p1_pgsql" version))
       (sha256
-        (base32 "1h9qigb3qfys46rqpqm6s5a0r7cz38hscgnsjlw3z6bln7l5izx6"))))
+        (base32 "1hjmw82f6k2dpchgdn2i0j0bvi7m6qihcnvrjq36c721di2995g9"))))
    (build-system rebar-build-system)
    (inputs (list erlang-xmpp))
    (synopsis "PostgreSQL driver for Erlang")
@@ -582,13 +582,13 @@ Erlang-based systems.")
 (define-public erlang-stringprep
  (package
    (name "erlang-stringprep")
-    (version "1.0.30")
+    (version "1.0.33")
    (source
     (origin
       (method url-fetch)
       (uri (hexpm-uri "stringprep" version))
       (sha256
-        (base32 "16hb49f9ghx8sqrs7928fjig9wyah22z7cl91y1pff50hhrrpz7n"))))
+        (base32 "1h4qvajlsfqfg61c9f0rjf3rmha8sahvqiivnc2zd1q8ql5v7y4n"))))
    (build-system rebar-build-system)
    (inputs (list erlang-p1-utils))
    (native-inputs (list erlang-pc))
@@ -665,13 +665,13 @@ dispatch them as Telemetry events.")
 (define-public erlang-cache-tab
  (package
    (name "erlang-cache-tab")
-    (version "1.0.31")
+    (version "1.0.33")
    (source
     (origin
       (method url-fetch)
       (uri (hexpm-uri "cache_tab" version))
       (sha256
-        (base32 "0lb35g3p3ybij5f7fnilq3ni37nfgzhajnrmhvplgch9985bd0l5"))))
+        (base32 "002rqgikbdnzfkzw4n2wi6k03155pcqf4j68w2mjmcjhn2g00n22"))))
    (build-system rebar-build-system)
    (inputs (list erlang-p1-utils))
    (native-inputs (list erlang-pc))
@@ -691,13 +691,13 @@ dispatch them as Telemetry events.")
 (define-public erlang-eimp
  (package
    (name "erlang-eimp")
-    (version "1.0.23")
+    (version "1.0.26")
    (source
     (origin
       (method url-fetch)
       (uri (hexpm-uri "eimp" version))
       (sha256
-        (base32 "12k2df0mwq16rh77ziiahq9mjd9cy2jfdnsbzkj96a6b4c07hz4h"))))
+        (base32 "0k04abnna5vqd0r248car4xkfjc83p5z0iqy4w7w9pxrfa2lwvfr"))))
    (build-system rebar-build-system)
    (inputs (list erlang-p1-utils))
    (native-inputs (list erlang-pc))
@@ -717,13 +717,13 @@ dispatch them as Telemetry events.")
 (define-public erlang-mqtree
  (package
    (name "erlang-mqtree")
-    (version "1.0.17")
+    (version "1.0.19")
    (source
     (origin
       (method url-fetch)
       (uri (hexpm-uri "mqtree" version))
       (sha256
-        (base32 "18z23c1axn6y9799f0ydb0m29wxvq956b57bzk886ixwiz7vgs2z"))))
+        (base32 "0g6fz25j942ryc6m6c6iyb9hvs22v3i5l2pq28l8i8a9biqna468"))))
    (build-system rebar-build-system)
    (inputs (list erlang-p1-utils))
    (native-inputs (list erlang-pc))
@@ -743,13 +743,13 @@ dispatch them as Telemetry events.")
 (define-public erlang-ezlib
  (package
    (name "erlang-ezlib")
-    (version "1.0.13")
+    (version "1.0.15")
    (source
     (origin
       (method url-fetch)
       (uri (hexpm-uri "ezlib" version))
       (sha256
-        (base32 "1fxz584ry1ib35r74hbmapwq71j5iv5rymm927ys0mgdz2rjmrly"))))
+        (base32 "1arfjvipmfvz52szlsy6gn4s1x25spip6gljwv7za6jj29nbl56x"))))
    (build-system rebar-build-system)
    (inputs (list erlang-p1-utils))
    (native-inputs (list erlang-pc))
@@ -769,13 +769,13 @@ dispatch them as Telemetry events.")
 (define-public erlang-fast-tls
  (package
    (name "erlang-fast-tls")
-    (version "1.1.22")
+    (version "1.1.25")
    (source
     (origin
       (method url-fetch)
       (uri (hexpm-uri "fast_tls" version))
       (sha256
-        (base32 "0ns8wbl5gxprficlm653ql6d51z6fy0fy3r3am3mrcbszfp7jmz6"))))
+        (base32 "08d894ckv6flwagngk5zwmgrwxz7nmrycsxap010wrqffjsq7qar"))))
    (build-system rebar-build-system)
    (inputs (list erlang-p1-utils openssl))
    (native-inputs (list erlang-pc openssl))
@@ -809,13 +809,13 @@ for Erlang/Elixir.")
 (define-public erlang-stun
  (package
    (name "erlang-stun")
-    (version "1.2.15")
+    (version "1.2.21")
    (source
     (origin
       (method url-fetch)
       (uri (hexpm-uri "stun" version))
       (sha256
-        (base32 "1vzdq3mpajv4y7g54nq4dswn44k6rk07ddjqwqn3zlczl90sbn7n"))))
+        (base32 "1n8j3vf8g2aq7i271lcm5202vzvvif5vz9m9d8528nyhp7pyhzrx"))))
    (build-system rebar-build-system)
    (inputs (list erlang-fast-tls erlang-p1-utils))
    (synopsis "STUN and TURN library for Erlang/Elixir")
@@ -827,13 +827,13 @@ Erlang/Elixir.")
 (define-public erlang-fast-xml
  (package
    (name "erlang-fast-xml")
-    (version "1.1.55")
+    (version "1.1.57")
    (source
     (origin
       (method url-fetch)
       (uri (hexpm-uri "fast_xml" version))
       (sha256
-        (base32 "11czr4iqv2m9b5msigwxf26q6ny90qzrawzcrmkzbm8fg0xf5ww3"))))
+        (base32 "0fcwj8yifwhr5m5maqa0ifwp7vad05d67ayxsmky9bxcmn84xhzf"))))
    (build-system rebar-build-system)
    (inputs (list erlang-p1-utils))
    (native-inputs (list erlang-pc))
@@ -854,13 +854,13 @@ parsing library.")
 (define-public erlang-xmpp
  (package
    (name "erlang-xmpp")
-    (version "1.9.1")
+    (version "1.11.1")
    (source
     (origin
       (method url-fetch)
       (uri (hexpm-uri "xmpp" version))
       (sha256
-        (base32 "1p3m6a8x89j8gsfpxf13hdxh9syd276g1jlhpz4a9hg4yqd47cfj"))))
+        (base32 "05ipgf53dnz5d7hfz0bvmv1lxs0c85737ni5ak0wxcsaj3gk7jd5"))))
    (build-system rebar-build-system)
    (inputs (list erlang-ezlib
                  erlang-fast-tls
@@ -886,13 +886,13 @@ for Erlang/Elixir.")
 (define-public erlang-esip
  (package
    (name "erlang-esip")
-    (version "1.0.56")
+    (version "1.0.59")
    (source
     (origin
       (method url-fetch)
       (uri (hexpm-uri "esip" version))
       (sha256
-        (base32 "07ys2n43fdg3cka6v7lh6633a177yiwmrkcd6vvj7dlkxw66dwwy"))))
+        (base32 "1rpvsfm5y932wfra1mvkqhdabikmwqlh65bky52b3h4x6hy2xpqb"))))
    (build-system rebar-build-system)
    (inputs (list erlang-fast-tls erlang-p1-utils erlang-stun))
    (native-inputs (list erlang-pc))
@@ -914,13 +914,13 @@ Erlang.")
 (define-public erlang-fast-yaml
  (package
    (name "erlang-fast-yaml")
-    (version "1.0.37")
+    (version "1.0.39")
    (source
     (origin
       (method url-fetch)
       (uri (hexpm-uri "fast_yaml" version))
       (sha256
-        (base32 "0sd72nal5i6mbmicsmb494mr4g0gvs719lzp2hj1gqpp3dr6is4d"))))
+        (base32 "13d7n1zjgvnkrxjk7riignqssrh952hs5x259vb6k4ibksmvkir4"))))
    (build-system rebar-build-system)
    (inputs (list erlang-p1-utils))
    (native-inputs (list erlang-pc libyaml))
@@ -945,13 +945,13 @@ Erlang/Elixir.")
 (define-public erlang-yconf
  (package
    (name "erlang-yconf")
-    (version "1.0.17")
+    (version "1.0.21")
    (source
     (origin
       (method url-fetch)
       (uri (hexpm-uri "yconf" version))
       (sha256
-        (base32 "098s6if76z37amcqi99m0xq30h5i1znbjmw4ri39li216a994a6x"))))
+        (base32 "0v093p002l0zw8v8g4f3l769fkr0ihv2xk39nj2mv1w6zpqsa965"))))
    (build-system rebar-build-system)
    (inputs (list erlang-fast-yaml))
    (synopsis "YAML configuration processor")
@@ -545,14 +545,14 @@ including input methods previous bundled inside Fcitx 4:
             "/fcitx5-configtool/fcitx5-configtool-" version ".tar.zst"))
       (sha256
        (base32 "1fb21mbc0k33cadslq0rjwi5y7fxm5jzgdk9yna3h2r62sdmdb60"))))
-    (build-system cmake-build-system)
+    (build-system qt-build-system)
    (arguments
-     (list #:tests? #f
+     (list #:qtbase qtbase
+           #:tests? #f
           #:configure-flags #~(list "-DUSE_QT6=ON")))
    (inputs
     (list fcitx5
           fcitx5-qt
-           qtbase
           qtdeclarative
           ksvg
           kcmutils
@@ -568,6 +568,7 @@ including input methods previous bundled inside Fcitx 4:
           kirigami
           libxkbcommon
           libx11
+           qtwayland
           xkeyboard-config
           libxkbfile
           gettext-minimal
@@ -218,8 +218,8 @@ native interface that allows you to integrate Mastodon's social experience
 seamlessly with your desktop environment.")
    (license license:gpl3)))

-(define-public tootle
-  (deprecated-package "tootle" tuba))
+(define-deprecated-package tootle
+  tuba)

 (define-public python-mastodon-py
  (package
@@ -49,6 +49,8 @@
  #:use-module (guix build-system go)
  #:use-module (guix build-system linux-module)
  #:use-module (guix build-system pyproject)
+  #:use-module (guix build-system python)
+  #:use-module (guix build-system qt)
  #:use-module (guix build-system trivial)
  #:use-module (guix utils)
  #:use-module (gnu packages)
@@ -2009,50 +2011,48 @@ compatible directories.")
 (define-public dbxfs
  (package
    (name "dbxfs")
-    (version "1.0.63")
+    (version "2.0.1")
    (source
-      (origin
-        ;; Release tarball contains files not in git repository.
-        (method git-fetch)
-        (uri (git-reference
-               (url "https://thelig.ht/code/dbxfs")
-               (commit (string-append "v" version))))
-        (file-name (git-file-name name version))
-        (sha256
-         (base32
-          "1vzfhw3z2r0rb6s0qdzirh3pl7rv1z8xmxa0z5h7h1wqhpl05ai7"))
-        (patches (search-patches "dbxfs-remove-sentry-sdk.patch"))
-        (snippet
-         #~(begin (use-modules (guix build utils))
-                  ;; Don't check for package updates.
-                  (substitute* "dbxfs/main.py"
-                    (("if version") "if False"))))))
+     (origin
+       (method url-fetch)
+       (uri (pypi-uri "dbxfs" version))
+       (sha256
+        (base32 "1ml03anr6zz26ab3d8z1r8klz9bfincrn5v53l725svar9an0b12"))))
    (build-system pyproject-build-system)
    (arguments
-     '(#:tests? #f
-       #:phases
-       (modify-phases %standard-phases
-         (add-after 'unpack 'relax-requirements
-           (lambda _
-             (substitute* "setup.py"
-               (("keyrings.alt>=3.1,<5")
-                "keyrings.alt>=3.1")))))))
-    (propagated-inputs
-     (list python-appdirs
-           python-block-tracing
+     (list
+      ;; XXX: No tests in Pypi archive. git-fetch fails to download the
+      ;; git source upstream though.
+      #:tests? #f
+      #:phases
+      #~(modify-phases %standard-phases
+          (add-after 'unpack 'relax-requirements
+            (lambda _
+              (substitute* "setup.py"
+                (("\"sentry_sdk.*\",")
+                 ""))
+              (substitute* "dbxfs/main.py"
+                (("import sentry_sdk")
+                 "")
+                (("^(\\s)sentry_sdk\\.init" all space)
+                 (string-append space "import sentry_sdk\n" all))
+                ;; Don't check for package updates.
+                (("if version")
+                 "if False")))))))
+    (inputs
+     (list python-block-tracing
           python-dropbox
-           python-keyring
-           python-keyrings-alt
+           python-platformdirs
           python-privy
           python-userspacefs))
    (native-inputs
     (list python-setuptools))
-  (home-page "https://thelig.ht/code/dbxfs/")
-  (synopsis "User-space file system for Dropbox")
-  (description
-   "@code{dbxfs} allows you to mount your Dropbox folder as if it were a
+    (home-page "https://thelig.ht/code/dbxfs/")
+    (synopsis "User-space file system for Dropbox")
+    (description
+     "@code{dbxfs} allows you to mount your Dropbox folder as if it were a
 local file system using FUSE.")
-  (license license:gpl3+)))
+    (license license:gpl3+)))

 (define-public rewritefs
  (let ((revision "1")
@@ -2441,7 +2441,7 @@ filtering and ordering functionality.
 (define-public sirikali
  (package
    (name "sirikali")
-    (version "1.6.0")
+    (version "1.8.4")
    (source (origin
              (method git-fetch)
              (uri (git-reference
@@ -2449,19 +2449,21 @@ filtering and ordering functionality.
                    (commit version)))
              (file-name (git-file-name name version))
              (sha256
-               (base32
-                "06cl7srxaqpzv7gcd17cl78qhrpqhdvpfcj4pr73fr5hhackrf52"))))
-    (build-system cmake-build-system)
+               (base32 "0z144ki7664aclnv3p0bpjlzknlsgldl85v76hs2bhnk1jjlgf5y"))))
+    (build-system qt-build-system)
    (arguments
-     '(#:tests? #f ;No tests
-       #:configure-flags '("-DQT5=true" "-DCMAKE_BUILD_TYPE=RELEASE")))
-    (inputs (list xdg-utils libpwquality libgcrypt libsecret qtbase-5))
+     (list
+      #:tests? #f                       ;No tests
+      #:qtbase qtbase
+      #:configure-flags #~(list "-DBUILD_WITH_QT6=true")))
+    (inputs (list xdg-utils libpwquality libgcrypt libsecret qtwayland))
    (native-inputs (list pkg-config))
    (home-page "https://mhogomchungu.github.io/sirikali/")
-    (synopsis "GUI front end to sshfs, ecryptfs, cryfs, gocryptfs, securefs, fscrypt and encfs")
-    (description "@dfn{SiriKali} is a Qt/C++ GUI application that manages
-+ecryptfs, cryfs, encfs, gocryptfs, fscrypt and securefs
-+based encrypted folders.")
+    (synopsis "GUI front end to file system encryption utilities")
+    (description
+     "SiriKali is a Qt/C++ GUI application for managing encrypted folders.  It
+supports various backends, including eCryptfs, CryFS, EncFS, gocryptfs, fscrypt,
+securefs, SSHFS, and Cryptomator.")
    (license license:gpl3+)))

 (define-public watcher
@@ -2,7 +2,7 @@
 ;;; Copyright © 2015, 2016, 2023 Andreas Enge <andreas@enge.fr>
 ;;; Copyright © 2016-2018, 2023 Efraim Flashner <efraim@flashner.co.il>
 ;;; Copyright © 2016 Alex Griffin <a@ajgrf.com>
-;;; Copyright © 2016, 2020 Hartmut Goebel <h.goebel@crazy-compilers.com>
+;;; Copyright © 2016, 2020, 2024, 2025 Hartmut Goebel <h.goebel@crazy-compilers.com>
 ;;; Copyright © 2017 Carlo Zancanaro <carlo@zancanaro.id.au>
 ;;; Copyright © 2017 Theodoros Foradis <theodoros@foradis.org>
 ;;; Copyright © 2017 Vasile Dumitrascu <va511e@yahoo.com>
@@ -110,6 +110,7 @@
  #:use-module (gnu packages haskell-check)
  #:use-module (gnu packages haskell-web)
  #:use-module (gnu packages haskell-xyz)
+  #:use-module (gnu packages iso-codes)
  #:use-module (gnu packages jemalloc)
  #:use-module (gnu packages libedit)
  #:use-module (gnu packages libevent)
@@ -1588,6 +1589,30 @@ The module also includes implementations of the Verhoeff,
 Luhn and family of ISO/IEC 7064 check digit algorithms.")
    (license license:lgpl2.1+)))

+(define-public python-schwifty
+  (package
+    (name "python-schwifty")
+    (version "2025.9.0")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (pypi-uri "schwifty" version))
+       (sha256
+        (base32 "16d0q1yzrh9fn6ybbsvhr9wbgld27rvn152w4wdcibidq2jbi0s2"))))
+    (build-system pyproject-build-system)
+    (native-inputs (list python-hatchling python-hatch-vcs python-pytest
+                         python-pydantic-2))
+    (propagated-inputs (list python-importlib-resources python-pycountry
+                             python-rstr python-typing-extensions))
+    (home-page "http://github.com/mdomke/schwifty/")
+    (synopsis "Python module to work with IBANs and BICs")
+    (description
+     "schwifty is a Python library that let's you easily work with
+IBANs and BICs as specified by the ISO.  IBAN is the Internation Bank Account
+Number and BIC the Business Identifier Code.  Both are used for international
+money transfer.")
+    (license license:expat)))
+
 (define-public python-duniterpy
  (package
    (name "python-duniterpy")
@@ -1632,21 +1657,44 @@ main features are:
 (define-public silkaj
  (package
    (name "silkaj")
-    (version "0.10.0")
+    (version "0.12.1")
    (source
     (origin
-       (method url-fetch)
-       (uri (pypi-uri "silkaj" version))
+       (method git-fetch)
+       (uri (git-reference
+             (url "https://git.duniter.org/clients/python/silkaj")
+             (commit (string-append "v" version))))
+       (file-name (git-file-name name version))
       (sha256
-        (base32 "0p8jqnswrrxri8i2ikdz8mij7gks0yab3wdcb37jf2kjwmrwanpk"))))
+        (base32 "0prglgwvzi676h4lyw9266sqiqbfs2l0mv0bmjvplvdxzzcs63bv"))))
    (build-system pyproject-build-system)
+    (arguments
+     (list
+      #:test-flags
+      ;; They require Poetry in the PATH.
+      #~(list "--ignore=tests/integration/"
+              ;; Network access is required.
+              "--deselect=tests/unit/money/test_history.py::test_csv_output"
+              ;; AssertionError: Expected 'mock' to have been called
+              ;; once. Called 0 times
+              "--deselect=tests/unit/test_auth.py::test_authentication_wif")
+      #:phases
+      #~(modify-phases %standard-phases
+          (add-before 'check 'set-check-environment
+            (lambda* (#:key inputs #:allow-other-keys)
+              (setenv "TZ" "UTC")
+              (setenv "TZDIR"
+                      (search-input-directory inputs
+                                              "share/zoneinfo")))))))
    (native-inputs
-     (list python-poetry-core))
+     (list python-poetry-core
+           python-pytest
+           python-pytest-sugar
+           tzdata-for-tests))
    (propagated-inputs
-     (list python-click
-           python-duniterpy
+     (list python-duniterpy
           python-pendulum
-           python-tabulate
+           python-rich-click
           python-texttable))
    (home-page "https://git.duniter.org/clients/python/silkaj")
    (synopsis "Command line client for Duniter network")
@@ -2012,11 +2060,16 @@ that allows you to run services and through them access the Bitcoin Cash network
    (arguments
     (list
      #:test-flags
-      #~(list "-k" (string-append
-                    ;; ModuleNotFoundError: No module named 'pytest'
-                    "not test_parse_stdin"
-                    ;; AssertionError: 5 not greater than 20
-                    " and not test_setup"))
+      #~(list
+         ;; These tests require network.
+         "--ignore=beancount/web/web_test.py"
+         "-k" (string-join
+               (list "not test_parse_stdin" ; ModuleNotFoundError: 'pytest'
+                     "test_setup" ; AssertionError: 5 not greater than 20
+                     ;; Require network
+                     "test_bake_archive__known"
+                     "test_bake_directory")
+               " and not "))
      #:phases
      #~(modify-phases %standard-phases
          (add-after 'unpack 'relax-requirements
@@ -2192,14 +2245,10 @@ from account statements and other documents and for managing documents.")
           python-werkzeug))
    (native-inputs
     (list python-babel
-           python-mypy
           python-pytest
-           python-pytest-cov
           python-setuptools
-           python-twine
           python-types-setuptools
-           python-types-simplejson
-           python-wheel))
+           python-types-simplejson))
    (home-page "https://beancount.github.io/fava/")
    (synopsis "Web interface for the accounting tool Beancount")
    (description "Fava is a web interface for the double-entry bookkeeping
@@ -2336,7 +2385,7 @@ trading, and risk management in real-life.")
 (define-public optionmatrix
  (package
    (name "optionmatrix")
-    (version "1.4.3")
+    (version "1.4.4")
    (source
     (origin
       (method url-fetch)
@@ -2344,7 +2393,7 @@ trading, and risk management in real-life.")
             "mirror://sourceforge/optionmatrix/optionmatrix-"
             version ".tar.xz"))
       (sha256
-        (base32 "1zd0pfiphnijh1l94swb3mjrpmjsn37z11mklamd7zw6h2d4zh4d"))))
+        (base32 "0ijwj798jli5rw1dj8dkz6sqbsa4hia407imicrk3djqmhn1ky3z"))))
    (build-system gnu-build-system)
    (inputs
     (list gsl gtk+ ncurses))
@@ -2388,7 +2437,7 @@ interactive controls.  This package provides a GTK+ graphical user interface
                       (invoke "make" "cython"))))))
    (inputs (list ta-lib))
    (propagated-inputs (list python-numpy))
-    (native-inputs (list python-cython-3
+    (native-inputs (list python-cython
                         python-pandas
                         python-pytest
                         python-setuptools
@@ -2459,6 +2508,24 @@ format used by SWIFT.  It returns smart Python collections for statistics
 and manipulation.")
    (license license:bsd-3)))

+(define-public python-mt940
+  (package
+    (name "python-mt940")
+    (version "0.6.0")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (pypi-uri "mt940" version))
+       (sha256
+        (base32 "00w9m06wxxqg9w1bkddqr6yl6ajlzhbiryqzijax64l6sks6ml6g"))))
+    (build-system pyproject-build-system)
+    (native-inputs (list python-setuptools-67 python-wheel-0.40))
+    (home-page "http://mt940.b2ck.com/")
+    (synopsis "A simple module to parse MT940 files")
+    (description "This package provides a simple module to parse MT940
+files.")
+    (license license:bsd-3)))
+
 (define-public xmrig
  (package
    (name "xmrig")
@@ -3,15 +3,19 @@
 ;;; Copyright © 2016 Eric Bavier <bavier@member.fsf.org>
 ;;; Copyright © 2017 David Craven <david@craven.ch>
 ;;; Copyright © 2017, 2018, 2022-2025 Efraim Flashner <efraim@flashner.co.il>
-;;; Copyright © 2018, 2020 Tobias Geerinckx-Rice <me@tobias.gr>
-;;; Copyright © 2018 Vagrant Cascadian <vagrant@debian.org>
+;;; Copyright © 2018, 2020, 2021, 2022 Tobias Geerinckx-Rice <me@tobias.gr>
+;;; Copyright © 2018, 2019 Vagrant Cascadian <vagrant@debian.org>
 ;;; Copyright © 2019 Mathieu Othacehe <m.othacehe@gmail.com>
+;;; Copyright © 2020 Jakub Kądziołka <kuba@kadziolka.net>
 ;;; Copyright © 2020, 2021, 2022 Marius Bakke <marius@gnu.org>
 ;;; Copyright © 2021 Petr Hodina <phodina@protonmail.com>
-;;; Copyright © 2022, 2023, 2025 Maxim Cournoyer <maxim@guixotic.coop>
+;;; Copyright © 2021, 2022, 2023, 2025 Maxim Cournoyer <maxim@guixotic.coop>
+;;; Copyright © 2023 Hilton Chain <hako@ultrarare.space>
 ;;; Copyright © 2023 Foundation Devices, Inc. <hello@foundationdevices.com>
 ;;; Copyright © 2023, 2024 Zheng Junjie <873216071@qq.com>
 ;;; Copyright © 2024 Ricardo Wurmus <rekado@elephly.net>
+;;; Copyright © 2025 Simen Endsjø <contact@simendsjo.me>
+;;; Copyright © 2025 Murilo <murilo@disroot.org>
 ;;;
 ;;; This file is part of GNU Guix.
 ;;;
@@ -38,6 +42,7 @@
  #:use-module (guix gexp)
  #:use-module (guix utils)
  #:use-module (guix git-download)
+  #:use-module (guix build-system cargo)
  #:use-module (guix build-system copy)
  #:use-module (guix build-system cmake)
  #:use-module (guix build-system gnu)
@@ -65,6 +70,7 @@
  #:use-module (gnu packages embedded)
  #:use-module (gnu packages flashing-tools)
  #:use-module (gnu packages flex)
+  #:use-module (gnu packages fontutils)
  #:use-module (gnu packages freedesktop)
  #:use-module (gnu packages gawk)
  #:use-module (gnu packages gcc)
@@ -214,6 +220,43 @@ assembler, disassembler, and debugging tools for the Linux kernel b43 wireless
 driver.")
      (license license:gpl2))))

+(define-public binwalk
+  (package
+    (name "binwalk")
+    (version "3.1.0")
+    (source
+     (origin
+       (method git-fetch)
+       (uri (git-reference
+             (url "https://github.com/ReFirmLabs/binwalk")
+             (commit (string-append "v" version))))
+       (file-name (git-file-name name version))
+       (sha256
+        (base32 "1jm1zx8jfj7fsxa87rkbq0qjjb66wqqmvqcs2127wr22g0xa6vvs"))))
+    (build-system cargo-build-system)
+    (arguments
+     (list
+      #:install-source? #f
+      ;; These tests fail on the v3.1.0 release.
+      ;; They will be most likely fixed on the next release, where the
+      ;; test files are included in the source itself.
+      ;; See <https://github.com/ReFirmLabs/binwalk/issues/882>.
+      #:cargo-test-flags ''("--"
+                            "--skip=binwalk::Binwalk"
+                            "--skip=binwalk::Binwalk::scan"
+                            "--skip=binwalk::Binwalk::analyze"
+                            "--skip=binwalk::Binwalk::extract")))
+    (native-inputs (list pkg-config))
+    (inputs (cons* fontconfig xz
+                   (cargo-inputs 'binwalk)))
+    (home-page "https://github.com/ReFirmLabs/binwalk")
+    (synopsis "Firmware analysis tool")
+    (description "Binwalk is a tool for analyzing, reverse engineering, and
+extracting firmware images.")
+    (license license:expat)))
+
+(define-deprecated-package python-binwalk binwalk)
+
 (define-public fwupd-efi
  (package
    (name "fwupd-efi")
@@ -248,7 +291,7 @@ used in the process of installing and updating firmware.")
 (define-public fwupd
  (package
    (name "fwupd")
-    (version "1.8.14")
+    (version "1.9.32")
    (source (origin
              (method git-fetch)
              (uri (git-reference
@@ -257,7 +300,7 @@ used in the process of installing and updating firmware.")
              (file-name (git-file-name name version))
              (sha256
               (base32
-                "179yc0nbbyrdya5q16ncf7lkslrhr3i90rgb9vdmv751ikilkby6"))))
+                "0nabjgskbpinj7sj44kblnd8g6psppas4g8qgajfs3p19skp07y1"))))
    (build-system meson-build-system)
    (arguments
     (list
@@ -280,7 +323,11 @@ used in the process of installing and updating firmware.")
      #~(modify-phases %standard-phases
          (add-after 'unpack 'make-source-writable
            (lambda _
-              (for-each make-file-writable
+              (for-each (lambda (file)
+                          ;; Skip symlinks as `make-file-writable' fails for those.
+                          (unless (eq? 'symlink (stat:type (lstat file)))
+                            (format #t "Make writable: ~A~%" file)
+                            (make-file-writable file)))
                        (find-files "."))
              (substitute* "src/fu-self-test.c"
                (("/bin/sh")
@@ -332,6 +379,7 @@ used in the process of installing and updating firmware.")
                                      "/libexec/fwupd/efi")
                       (string-append #$output "/libexec/fwupd/efi")))))))
    (native-inputs (list gobject-introspection
+                         python-jinja2
                         python-pygobject
                         python-pillow
                         python-pycairo
@@ -1247,8 +1295,8 @@ Virtual Machines.  OVMF contains a sample UEFI firmware for QEMU and KVM.")
                      (install-file "RISCV_VIRT_CODE.fd" fmw)
                      (install-file "RISCV_VIRT_VARS.fd" fmw))))))))))))

-(define-public ovmf
-  (deprecated-package "ovmf" ovmf-x86-64))
+(define-deprecated-package ovmf
+  ovmf-x86-64)

 (define* (make-arm-trusted-firmware platform #:key
                                    (triplet "aarch64-linux-gnu")
@@ -1628,6 +1676,7 @@ corresponding layout." layout))
           gnu-make
           grep
           python
+           python-appdirs
           python-dotty-dict
           python-hid
           python-hjson
@@ -61,6 +61,7 @@
  #:use-module (gnu packages check)
  #:use-module (gnu packages compression)
  #:use-module (gnu packages documentation)
+  #:use-module (gnu packages electronics)
  #:use-module (gnu packages elf)
  #:use-module (gnu packages embedded)
  #:use-module (gnu packages flex)
@@ -76,7 +77,10 @@
  #:use-module (gnu packages pciutils)
  #:use-module (gnu packages perl)
  #:use-module (gnu packages pkg-config)
+  #:use-module (gnu packages python)
  #:use-module (gnu packages qt)
+  #:use-module (gnu packages readline)
+  #:use-module (gnu packages swig)
  #:use-module (gnu packages tls)
  #:use-module (gnu packages xml)
  #:use-module (srfi srfi-26))
@@ -161,29 +165,29 @@ brick your device.")
 (define-public avrdude
  (package
    (name "avrdude")
-    (version "8.0")
+    (version "8.1")
    (source
     (origin
-      (method git-fetch)
-      (uri (git-reference
-            (url "https://github.com/avrdudes/avrdude/")
-            (commit (string-append "v" version))))
-      (file-name (git-file-name name version))
-      (sha256
-       (base32 "1r8cfi1lkic8zknb7x44i2mmwxzfwfbblr894x36mffa5da0g7y3"))))
+       (method git-fetch)
+       (uri (git-reference
+             (url "https://github.com/avrdudes/avrdude/")
+             (commit (string-append "v" version))))
+       (file-name (git-file-name name version))
+       (sha256
+        (base32 "1jfz0z8i5vib181f854zwxd8avw5fy59lh3d78igqxwm08sv8nlb"))))
    (build-system cmake-build-system)
    (arguments
-     (list #:tests? #f))                      ; no tests
+     (list #:tests? #f))                     ;no tests
    (inputs
-     (list libelf libusb-compat libftdi))
+     (list libelf libusb-compat libftdi libserialport readline))
    (native-inputs
-     (list bison flex))
+     (list bison flex python-wrapper))
    (home-page "https://www.nongnu.org/avrdude/")
    (synopsis "AVR downloader and uploader")
    (description
-     "@code{AVRDUDE} is a utility to download/upload/manipulate the ROM and EEPROM
-contents of AVR microcontrollers using the @acronym{ISP, in-system programming}
-technique.")
+     "@code{AVRDUDE} is a utility to download/upload/manipulate the ROM and
+EEPROM contents of AVR microcontrollers using the @acronym{ISP, in-system
+programming} technique.")
    (license license:gpl2+)))

 (define-public dfu-programmer
@@ -26,6 +26,7 @@
  #:use-module (guix gexp)
  #:use-module (guix utils)
  #:use-module (gnu packages)
+  #:use-module (gnu packages bootstrap)
  #:use-module (gnu packages m4)
  #:use-module (gnu packages man)
  #:use-module (gnu packages bison)
@@ -35,26 +36,18 @@
  (package
    (name "flex")
    (version "2.6.4")
-    (source (origin
-              (method url-fetch)
-              (uri (string-append
-                    "https://github.com/westes/flex"
-                    "/releases/download/v" version "/"
-                    "flex-" version ".tar.gz"))
-              (sha256
-               (base32
-                "15g9bv236nzi665p9ggqjlfn4dwck5835vf0bbw2cz7h5c1swyp8"))))
+    (source (bootstrap-origin           ;avoid a circular dependency
+             (origin
+               (method url-fetch)
+               (uri (string-append
+                     "https://github.com/westes/flex"
+                     "/releases/download/v" version "/"
+                     "flex-" version ".tar.gz"))
+               (sha256
+                (base32
+                 "15g9bv236nzi665p9ggqjlfn4dwck5835vf0bbw2cz7h5c1swyp8"))
+               (patches (search-patches "flex-fix-make-dependencies.patch")))))
    (build-system gnu-build-system)
-    (inputs
-     (let ((bison-for-tests
-            (package
-              (inherit bison)
-              (arguments
-               ;; Disable tests, since they require flex.
-               (substitute-keyword-arguments (package-arguments bison)
-                 ((#:tests? _ #f) #f)))
-              (inputs (alist-delete "flex" (package-inputs bison))))))
-       `(("bison" ,bison-for-tests))))
    (arguments
     (if (or (target-hurd64?) (%current-target-system))
         (list #:configure-flags
@@ -67,7 +60,15 @@
         '()))
    ;; m4 is not present in PATH when cross-building
    (native-inputs
-     (list help2man m4))
+     (let ((bison-for-tests
+            (package
+              (inherit bison)
+              (arguments
+               ;; Disable tests, since they require flex.
+               (substitute-keyword-arguments (package-arguments bison)
+                 ((#:tests? _ #f) #f)))
+              (inputs (alist-delete "flex" (package-inputs bison))))))
+       (list bison-for-tests help2man m4)))
    (propagated-inputs (list m4))
    (home-page "https://github.com/westes/flex")
    (synopsis "Fast lexical analyser generator")
@@ -68,6 +68,7 @@
 ;;; Copyright © 2025 Gabriel Santos <gabrielsantosdesouza@disroot.org>
 ;;; Copyright © 2025 Liam Hupfer <liam@hpfr.net>
 ;;; Copyright © 2025 Evgeny Pisemsky <mail@pisemsky.site>
+;;; Copyright © 2025 Lee Thompson <lee.p.thomp@gmail.com>
 ;;;
 ;;; This file is part of GNU Guix.
 ;;;
@@ -1102,35 +1103,6 @@ Ideographs Extension B of Unicode.
 of Unicode.
@end itemize\n")))

-;; In past, TW-Kai and TW-Sung are distributed in same zip archive.  But now
-;; they are already separated in font-cns11643-kai and font-cns11643-sung.
-;; This package exists as a backward-compatible definition.
-(define-public font-cns11643
-  (package
-    (inherit font-cns11643-sung)
-    (name "font-cns11643")
-    (source #f)
-    (build-system trivial-build-system)
-    (arguments
-     (list
-      #:modules '((guix build union))
-      #:builder
-      #~(begin
-          (use-modules (ice-9 match)
-                       (guix build union))
-          (match %build-inputs
-            (((names . directories) ...)
-             (union-build #$output directories))))))
-    (inputs (list font-cns11643-kai font-cns11643-sung))
-    (synopsis "CJK TrueType fonts, TW-Kai and TW-Sung")
-    (description
-     "@code{CNS 11643} character set (Chinese National Standard, or Chinese
-Standard Interchange Code) is the standard character set of the Republic of
-China (Taiwan) for Chinese Characters and other Unicode symbols.
-
-This package is an amalgamation of @code{font-cns11643-sung} and
-@code{font-cns11643-kai}.")))
-
 (define-public font-cns11643-swjz
  (package
    (name "font-cns11643-swjz")
@@ -1310,7 +1282,7 @@ heavier printing.")
 (define-public font-amiri
  (package
    (name "font-amiri")
-    (version "1.000")
+    (version "1.003")
    (source (origin
              (method git-fetch)
              (uri (git-reference
@@ -1319,7 +1291,7 @@ heavier printing.")
              (file-name (git-file-name name version))
              (sha256
               (base32
-                "0c4yg1b03aihdqvz6w5ak8wapni3l8p18mw6bkqhblmm75jb5kif"))))
+                "0hi3d6s42wk2hgk2x8niga84h1kpk9p4vxkyich1mzmw5b7kq8hw"))))
    (build-system gnu-build-system)
    (arguments
     (list
@@ -1991,8 +1963,8 @@ well in user interface (UI) environments.")
    (license license:silofl1.1)))

 ;; https://github.com/adobe-fonts/source-sans/issues/192
-(define-public font-adobe-source-sans-pro
-  (deprecated-package "font-adobe-source-sans-pro"  font-adobe-source-sans))
+(define-deprecated-package font-adobe-source-sans-pro
+  font-adobe-source-sans)

 (define-public font-adobe-source-serif
  (package
@@ -2018,8 +1990,8 @@ family.")
    (license license:silofl1.1)))

 ;; https://github.com/adobe-fonts/source-serif/issues/77
-(define-public font-adobe-source-serif-pro
-  (deprecated-package "font-adobe-source-serif-pro" font-adobe-source-serif))
+(define-deprecated-package font-adobe-source-serif-pro
+  font-adobe-source-serif)

 (define-public font-microsoft-cascadia
  (package
@@ -2929,8 +2901,8 @@ characters mostly intact.")
  constraint of usability at small point sizes.")
    (license (list license:silofl1.1))))

-(define-public font-iosevka-comfy
-  (deprecated-package "font-iosevka-comfy"  font-aporetic))
+(define-deprecated-package font-iosevka-comfy
+  font-aporetic)

 (define-public font-junicode
  (package
@@ -3653,8 +3625,8 @@ and legible typeface suitable for web pages and applications.")
    (license license:silofl1.1)))

 ;; https://github.com/rastikerdar/vazirmatn/blob/master/CHANGELOG.md#3200
-(define-public font-vazir
-  (deprecated-package "font-vazir" font-vazirmatn))
+(define-deprecated-package font-vazir
+  font-vazirmatn)

 (define-public font-victor-mono
  (package
@@ -5021,3 +4993,25 @@ typeface.  It is inspired by many 5×7 pixel grid typefaces, especially Gilles
 Boccon-Gibod’s MonteCarlo.  Unlike traditional bitmap fonts, it is distributed
 in typical scalable font formats.")
    (license license:silofl1.1)))
+
+(define-public font-kawkab-mono
+  (package
+    (name "font-kawkab-mono")
+    (version "0.501")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (string-append
+             "https://github.com/aiaf/kawkab-mono/releases/download/"
+             "v" version "/kawkab-mono-" version ".zip"))
+       (sha256
+        (base32 "0rjn2kdfs81cbpnffxj0sgw6zav5503smjkldlbg1ynyvmbnzh0i"))))
+    (build-system font-build-system)
+    (outputs '("out" "ttf" "woff"))
+    (home-page "https://makkuk.com/kawkab-mono/")
+    (synopsis "Monospaced Arabic typeface")
+    (description
+     "Kawkab Mono (كوكب مونو) is a monospaced Arabic typeface.  It is designed
+for code and text-editing in particular, and whenever having a fixed-pitch font
+is necessary, such as when composing tabular data using text.")
+    (license license:silofl1.1)))
--- a/Show More
+++ b/Show More