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gnu: packages/astronomy: Sort alphabetically.

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* gnu/packages/astronomy.scm (python-ccdproc, python-gwcs,
python-jplephem, python-jwst, python-jwst-reffiles): Sort variables
alphabetically.

Change-Id: I8a0b77fe456927a158080570c52cb4c48d58257f
This commit is contained in:
Sharlatan Hellseher
2024-12-06 22:01:54 +00:00
parent 4127992ff7
commit 18da502785
1 changed files with 222 additions and 222 deletions
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@@ -1922,6 +1922,34 @@ Applications} formats (such as @file{.image} datasets). This implementation
is independent of and does not use @code{casacore}.")
(license license:lgpl2.0)))
(define-public python-ccdproc
(package
(name "python-ccdproc")
(version "2.4.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "ccdproc" version))
(sha256
(base32 "14faivm9nihpdwzg0jx1c9zr7jk22gjfjw78raq6h63ypl10i6yx"))))
(build-system pyproject-build-system)
(native-inputs
(list python-memory-profiler
python-pytest-astropy))
(propagated-inputs
(list python-astropy
python-astroscrappy
python-numpy
python-reproject
python-scikit-image
python-scipy))
(home-page "http://ccdproc.readthedocs.io/")
(synopsis "Basic data reductions of CCD images")
(description "The ccdproc package provides many of the necessary tools for
processing of CCD images built on a framework to provide error propagation and
bad pixel tracking throughout the reduction process.")
(license license:bsd-3)))
(define-public python-coolest
(package
(name "python-coolest")
@@ -2383,6 +2411,43 @@ across many files.")
(description "Multidimensional data visualization across files.")
(license license:bsd-3)))
(define-public python-gwcs
(package
(name "python-gwcs")
(version "0.21.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "gwcs" version))
(sha256
(base32 "1fn5l4v236bl7xqi1is40c2q57dji8by98iwqcndfnmjwqf7zllc"))))
(build-system pyproject-build-system)
(native-inputs
(list python-jsonschema
python-jmespath
python-pytest
python-pytest-doctestplus
python-pyyaml
python-setuptools-scm))
(propagated-inputs
(list python-asdf
python-asdf-astropy
python-asdf-wcs-schemas
python-astropy
python-numpy
python-scipy))
(home-page "https://gwcs.readthedocs.io/en/latest/")
(synopsis "Generalized World Coordinate System")
(description "Generalized World Coordinate System (GWCS) is an Astropy
affiliated package providing tools for managing the World Coordinate System of
astronomical data.
GWCS takes a general approach to the problem of expressing transformations
between pixel and world coordinates. It supports a data model which includes
the entire transformation pipeline from input coordinates (detector by
default) to world coordinates.")
(license license:bsd-3)))
(define-public python-halotools
(package
(name "python-halotools")
@@ -3508,34 +3573,6 @@ be as fast as possible so some of the readability has been sacrificed,
specifically in the C code.")
(license license:bsd-3)))
(define-public python-ccdproc
(package
(name "python-ccdproc")
(version "2.4.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "ccdproc" version))
(sha256
(base32 "14faivm9nihpdwzg0jx1c9zr7jk22gjfjw78raq6h63ypl10i6yx"))))
(build-system pyproject-build-system)
(native-inputs
(list python-memory-profiler
python-pytest-astropy))
(propagated-inputs
(list python-astropy
python-astroscrappy
python-numpy
python-reproject
python-scikit-image
python-scipy))
(home-page "http://ccdproc.readthedocs.io/")
(synopsis "Basic data reductions of CCD images")
(description "The ccdproc package provides many of the necessary tools for
processing of CCD images built on a framework to provide error propagation and
bad pixel tracking throughout the reduction process.")
(license license:bsd-3)))
(define-public python-cdflib
(package
(name "python-cdflib")
@@ -3817,6 +3854,163 @@ implemented using the astropy.modeling framework.")
@url{Helioviewer API, https://api.helioviewer.org/docs/v2/}.")
(license license:bsd-2)))
(define-public python-jplephem
(package
(name "python-jplephem")
(version "2.22")
(source
(origin
(method url-fetch)
(uri (pypi-uri "jplephem" version))
(sha256
(base32 "0b2rgb7pvwnl72pqjryf9c812mmdxr69fwiym7mnz05l2xrcr6hd"))))
(build-system pyproject-build-system)
(arguments
(list
#:phases
#~(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "python" "-m" "unittest" "discover" "-s" "test")))))))
(native-inputs
(list python-setuptools
python-wheel))
(propagated-inputs
(list python-numpy))
(home-page "https://github.com/brandon-rhodes/python-jplephem")
(synopsis "Python version of NASA DE4xx ephemerides")
(description
"@code{skyfield} computes positions for the stars, planets, and
satellites in orbit around the Earth. Its results should agree with the
positions generated by the United States Naval Observatory and their
Astronomical Almanac to within 0.0005 arcseconds (half a @emph{mas} or
milliarcsecond).")
(license license:expat)))
(define-public python-jwst
(package
(name "python-jwst")
(version "1.16.1")
(source (origin
(method url-fetch)
(uri (pypi-uri "jwst" version))
(sha256
(base32
"1bqfgqp4gdm1ky5dvzhzpgygwr710h4mbykp5sb9aw3cw9jg1bk7"))
(modules '((guix build utils)))
(snippet
'(begin
;; Replace reference to external configobj.
(substitute* (find-files "." "\\.py$")
(("from astropy.extern import configobj") "import configobj")
(("from astropy.extern.configobj import validate") "import validate")
(("from astropy.extern.configobj.configobj import ") "from configobj import ")
(("from astropy.extern.configobj.validate import ") "from validate import "))))))
(build-system pyproject-build-system)
(arguments
(list
;; XXX: Tests require access to https://jwst-crds-pub.stsci.edu server for
;; getting data sets.
#:tests? #f
#:phases #~(modify-phases %standard-phases
;; NOTE: (Sharlatan-20230529T113448+0100): opencv-python's
;; version can't be detected, it could the way it's packed in
;; Guix. Review failing sanity check with more efforts,
;; disable for now to make package buildable.
(delete 'sanity-check))))
;; opencv provides OpenCV-Python which is Listed as install requirement.
(propagated-inputs (list opencv
python-asdf
python-asdf-astropy
python-astropy
python-bayesicfitting
python-crds
python-drizzle
python-gwcs
python-importlib-metadata
python-jplephem
python-jsonschema
python-numpy
python-packaging
python-photutils
python-poppy
python-psutil
python-pyparsing
python-pysiaf
python-requests
python-scikit-image
python-scipy
python-spherical-geometry
python-stcal
python-stdatamodels
python-stpipe
python-stsci-image
python-stsci-imagestats
python-synphot
python-tweakwcs
python-wiimatch))
(native-inputs (list python-colorama
python-pytest
python-pytest-cov
python-pytest-doctestplus
python-pytest-openfiles
python-requests-mock
;; python-ruff ; not packed yet in Guix
python-setuptools
python-setuptools-scm
python-wheel))
(home-page "https://jwst-pipeline.readthedocs.io/en/latest/")
(synopsis
"Python library for science observations from the James Webb Space Telescope")
(description
"This package provides an access to the JWST Science Calibration Pipeline
processes data from all JWST instruments and observing modes by applying various
science corrections sequentially, producing both fully-calibrated individual
exposures and high-level data products (mosaics, extracted spectra, etc.).")
(license license:bsd-3)))
(define-public python-jwst-reffiles
(package
(name "python-jwst-reffiles")
(version "1.0.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "jwst_reffiles" version))
(sha256
(base32 "1dlw955cw49qczdmimglmlcbal8vd3wbv5j48ckllvjgd59pwr3s"))))
(build-system pyproject-build-system)
(arguments
(list
;; FIXME: Invistigate why it failes on python-jwst side where the
;; python-tweakwcs is built just fine:
;;
;; <...>/tweakwcs/matchutils.py:18: in <module>
;; from stsci.stimage import xyxymatch
;; E ModuleNotFoundError: No module named 'stsci.stimage'
#:tests? #f
#:phases
#~(modify-phases %standard-phases
(delete 'sanity-check))))
(propagated-inputs
(list python-astropy
python-jwst
python-matplotlib
python-numpy
python-scipy))
(native-inputs
(list python-pytest
python-stsci-stimage))
(home-page "https://github.com/spacetelescope/jwst_reffiles")
(synopsis "Tool for JWST's CRDS-formatted reference files creation")
(description
"This package provides a tool to create @acronym{Calibration References
Data System,CRDS}-formatted reference files for @acronym{James Webb Space
Telescope,JWST} from a set of input dark current files and a set of flat field
files.")
(license license:bsd-3)))
(define-public python-kanon
(package
(name "python-kanon")
@@ -5254,163 +5448,6 @@ PYSYNPHOT, utilizing Astropy covering instrument specific portions of the old
packages for HST.")
(license license:bsd-3)))
(define-public python-jplephem
(package
(name "python-jplephem")
(version "2.22")
(source
(origin
(method url-fetch)
(uri (pypi-uri "jplephem" version))
(sha256
(base32 "0b2rgb7pvwnl72pqjryf9c812mmdxr69fwiym7mnz05l2xrcr6hd"))))
(build-system pyproject-build-system)
(arguments
(list
#:phases
#~(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "python" "-m" "unittest" "discover" "-s" "test")))))))
(native-inputs
(list python-setuptools
python-wheel))
(propagated-inputs
(list python-numpy))
(home-page "https://github.com/brandon-rhodes/python-jplephem")
(synopsis "Python version of NASA DE4xx ephemerides")
(description
"@code{skyfield} computes positions for the stars, planets, and
satellites in orbit around the Earth. Its results should agree with the
positions generated by the United States Naval Observatory and their
Astronomical Almanac to within 0.0005 arcseconds (half a @emph{mas} or
milliarcsecond).")
(license license:expat)))
(define-public python-jwst
(package
(name "python-jwst")
(version "1.16.1")
(source (origin
(method url-fetch)
(uri (pypi-uri "jwst" version))
(sha256
(base32
"1bqfgqp4gdm1ky5dvzhzpgygwr710h4mbykp5sb9aw3cw9jg1bk7"))
(modules '((guix build utils)))
(snippet
'(begin
;; Replace reference to external configobj.
(substitute* (find-files "." "\\.py$")
(("from astropy.extern import configobj") "import configobj")
(("from astropy.extern.configobj import validate") "import validate")
(("from astropy.extern.configobj.configobj import ") "from configobj import ")
(("from astropy.extern.configobj.validate import ") "from validate import "))))))
(build-system pyproject-build-system)
(arguments
(list
;; XXX: Tests require access to https://jwst-crds-pub.stsci.edu server for
;; getting data sets.
#:tests? #f
#:phases #~(modify-phases %standard-phases
;; NOTE: (Sharlatan-20230529T113448+0100): opencv-python's
;; version can't be detected, it could the way it's packed in
;; Guix. Review failing sanity check with more efforts,
;; disable for now to make package buildable.
(delete 'sanity-check))))
;; opencv provides OpenCV-Python which is Listed as install requirement.
(propagated-inputs (list opencv
python-asdf
python-asdf-astropy
python-astropy
python-bayesicfitting
python-crds
python-drizzle
python-gwcs
python-importlib-metadata
python-jplephem
python-jsonschema
python-numpy
python-packaging
python-photutils
python-poppy
python-psutil
python-pyparsing
python-pysiaf
python-requests
python-scikit-image
python-scipy
python-spherical-geometry
python-stcal
python-stdatamodels
python-stpipe
python-stsci-image
python-stsci-imagestats
python-synphot
python-tweakwcs
python-wiimatch))
(native-inputs (list python-colorama
python-pytest
python-pytest-cov
python-pytest-doctestplus
python-pytest-openfiles
python-requests-mock
;; python-ruff ; not packed yet in Guix
python-setuptools
python-setuptools-scm
python-wheel))
(home-page "https://jwst-pipeline.readthedocs.io/en/latest/")
(synopsis
"Python library for science observations from the James Webb Space Telescope")
(description
"This package provides an access to the JWST Science Calibration Pipeline
processes data from all JWST instruments and observing modes by applying various
science corrections sequentially, producing both fully-calibrated individual
exposures and high-level data products (mosaics, extracted spectra, etc.).")
(license license:bsd-3)))
(define-public python-jwst-reffiles
(package
(name "python-jwst-reffiles")
(version "1.0.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "jwst_reffiles" version))
(sha256
(base32 "1dlw955cw49qczdmimglmlcbal8vd3wbv5j48ckllvjgd59pwr3s"))))
(build-system pyproject-build-system)
(arguments
(list
;; FIXME: Invistigate why it failes on python-jwst side where the
;; python-tweakwcs is built just fine:
;;
;; <...>/tweakwcs/matchutils.py:18: in <module>
;; from stsci.stimage import xyxymatch
;; E ModuleNotFoundError: No module named 'stsci.stimage'
#:tests? #f
#:phases
#~(modify-phases %standard-phases
(delete 'sanity-check))))
(propagated-inputs
(list python-astropy
python-jwst
python-matplotlib
python-numpy
python-scipy))
(native-inputs
(list python-pytest
python-stsci-stimage))
(home-page "https://github.com/spacetelescope/jwst_reffiles")
(synopsis "Tool for JWST's CRDS-formatted reference files creation")
(description
"This package provides a tool to create @acronym{Calibration References
Data System,CRDS}-formatted reference files for @acronym{James Webb Space
Telescope,JWST} from a set of input dark current files and a set of flat field
files.")
(license license:bsd-3)))
(define-public python-pyerfa
(package
(name "python-pyerfa")
@@ -6135,43 +6172,6 @@ System (WCS) tags. Users should not need to install this directly; instead,
install an implementation package such as gwcs.")
(license license:bsd-3)))
(define-public python-gwcs
(package
(name "python-gwcs")
(version "0.21.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "gwcs" version))
(sha256
(base32 "1fn5l4v236bl7xqi1is40c2q57dji8by98iwqcndfnmjwqf7zllc"))))
(build-system pyproject-build-system)
(native-inputs
(list python-jsonschema
python-jmespath
python-pytest
python-pytest-doctestplus
python-pyyaml
python-setuptools-scm))
(propagated-inputs
(list python-asdf
python-asdf-astropy
python-asdf-wcs-schemas
python-astropy
python-numpy
python-scipy))
(home-page "https://gwcs.readthedocs.io/en/latest/")
(synopsis "Generalized World Coordinate System")
(description "Generalized World Coordinate System (GWCS) is an Astropy
affiliated package providing tools for managing the World Coordinate System of
astronomical data.
GWCS takes a general approach to the problem of expressing transformations
between pixel and world coordinates. It supports a data model which includes
the entire transformation pipeline from input coordinates (detector by
default) to world coordinates.")
(license license:bsd-3)))
(define-public python-rad
(package
(name "python-rad")