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gnu: Remove htslib-1.19.
* gnu/packages/bioinformatics.scm (htslib-1.19): Delete variable. Change-Id: I7804d3ae403dbdf149e3012922f7ac9a382288d7
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@@ -9599,48 +9599,6 @@ data. It also provides the @command{bgzip}, @command{htsfile}, and
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;; the rest is released under the Expat license
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(license (list license:expat license:bsd-3))))
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(define-public htslib-1.19
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(package
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(inherit htslib)
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(version "1.19")
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(source (origin
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(method url-fetch)
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(uri (string-append
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"https://github.com/samtools/htslib/releases/download/"
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version "/htslib-" version ".tar.bz2"))
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(sha256
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(base32
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"0dh79lwpspwwfbkmllrrhbk8nkvlfc5b5ib4d0xg5ld79w6c8lc7"))
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(snippet
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#~(begin
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(use-modules (guix build utils))
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(delete-file-recursively "htscodecs")))))
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(build-system gnu-build-system)
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;; Let htslib translate "gs://" and "s3://" to regular https links with
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;; "--enable-gcs" and "--enable-s3". For these options to work, we also
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;; need to set "--enable-libcurl".
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(arguments
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`(#:configure-flags '("--enable-gcs"
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"--enable-libcurl"
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"--enable-s3"
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"--with-external-htscodecs")))
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(inputs
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(list bzip2 curl openssl xz))
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;; This is referred to in the pkg-config file as a required library.
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(propagated-inputs
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(list htscodecs zlib))
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(native-inputs
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(list perl))
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(home-page "https://www.htslib.org")
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(synopsis "C library for reading/writing high-throughput sequencing data")
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(description
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"HTSlib is a C library for reading/writing high-throughput sequencing
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data. It also provides the @command{bgzip}, @command{htsfile}, and
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@command{tabix} utilities.")
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;; Files under cram/ are released under the modified BSD license;
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;; the rest is released under the Expat license
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(license (list license:expat license:bsd-3))))
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(define-public htslib-1.14
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(package/inherit htslib
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(version "1.14")
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