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gnu: r-variantannotation: Update to 1.56.0.

* gnu/packages/bioconductor.scm (r-variantannotation): Update to 1.56.0.
[propagated-inputs]: Remove r-genomeinfodb; add r-curl and r-seqinfo.

Change-Id: I3f4faaa0391c82757b6bca018069f8c9ffebb016
This commit is contained in:
Ricardo Wurmus
2025-11-25 13:48:18 +01:00
parent 0cd32ffe14
commit 6a7e94e75e
+4 -3
View File
@@ -15046,13 +15046,13 @@ R, enabling interactive analysis and visualization of genome-scale data.")
(define-public r-variantannotation
(package
(name "r-variantannotation")
(version "1.54.1")
(version "1.56.0")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "VariantAnnotation" version))
(sha256
(base32
"0w4k79azyb3s8m1spcmqjmzx3ig9mnzv5vnlcfaxk0p8z0ahzxfr"))))
"008saw81bnzdyglysqcbmp745k8pxgx3ng7hkpqdry773vf3xfn8"))))
(properties
`((upstream-name . "VariantAnnotation")
(updater-ignored-native-inputs
@@ -15076,8 +15076,8 @@ R, enabling interactive analysis and visualization of genome-scale data.")
r-biocgenerics
r-biostrings
r-bsgenome
r-curl
r-dbi
r-genomeinfodb
r-genomicfeatures
r-genomicranges
r-iranges
@@ -15086,6 +15086,7 @@ R, enabling interactive analysis and visualization of genome-scale data.")
r-rsamtools
r-rtracklayer
r-s4vectors
r-seqinfo
r-summarizedexperiment
r-xvector))
(native-inputs (list r-bsgenome-hsapiens-ucsc-hg19