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gnu: r-biocset: Replace custom phase with SKIPPED-TESTS argument.
* gnu/packages/bioconductor.scm (r-biocset)[arguments]: Remove phase 'delete-bad-tests; specify #:skipped-tests instead. Change-Id: Ibcdfdca6e35869e260a8f02deddacaa59002c7f1
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@@ -25110,14 +25110,19 @@ analytics on packages.")
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(build-system r-build-system)
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(arguments
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(list
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#:phases
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'(modify-phases %standard-phases
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(add-after 'unpack 'delete-bad-tests
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(lambda _
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;; One test tries to connect to a website.
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(delete-file "tests/testthat/test_mapping_set.R")
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;; One test fails with a sorting error.
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(delete-file "tests/testthat/test_BiocSet-methods.R"))))))
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#:skipped-tests
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;; One test tries to connect to a website. ("'kegg_sets\\(\\)' works")
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'("test_mapping_set.R"
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("test_BiocSet-methods.R"
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;; This test fails because "The `add` argument of `group_by()` was
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;; deprecated in dplyr 1.0.0 and is now defunct."
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"'summarise.BiocSet\\(\\)' works"
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;; Expected `es_elementset(es2)$element` to equal
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;; `sort(es_elementset(es)$element)`.
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"'arrange.BiocSet\\(\\)' works")
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("test_tbl_elementset_base-class.R"
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;; `set` must be size 1, not 52.
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"'summarise.tbl_elementset_base\\(\\)' works"))))
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(propagated-inputs
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(list r-annotationdbi
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r-biocio
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