1
0
mirror of https://git.savannah.gnu.org/git/guix.git synced 2026-04-28 21:20:29 +02:00

gnu: Add r-ace2fastq.

* gnu/packages/cran.scm (r-ace2fastq): New variable.
This commit is contained in:
Ricardo Wurmus
2019-12-13 18:51:11 +01:00
parent b8d52fe277
commit b441dac7af

View File

@@ -16860,3 +16860,29 @@ Functions for performing cross validation are also supplied along with basic
prediction and plotting functions. @dfn{Sparse zero variance
discriminant} (SZVD) analysis is also included in the package.")
(license license:gpl2+)))
(define-public r-ace2fastq
(package
(name "r-ace2fastq")
(version "0.6.0")
(source
(origin
(method url-fetch)
(uri (cran-uri "ace2fastq" version))
(sha256
(base32
"09kk3yyqnr2xp820g0p3aai9a21figigjr9lxkr3zjq2d8gzwfic"))))
(properties `((upstream-name . "ace2fastq")))
(build-system r-build-system)
(propagated-inputs
`(("r-stringr" ,r-stringr)))
(home-page "https://github.com/c5sire/ace2fastq")
(synopsis "ACE file to FASTQ converter")
(description
"The ACE file format is used in genomics to store contigs from sequencing
machines. This tools converts it into FASTQ format. Both formats contain the
sequence characters and their corresponding quality information. Unlike the
FASTQ file, the ACE file stores the quality values numerically. The
conversion algorithm uses the standard Sanger formula. The package
facilitates insertion into pipelines, and content inspection.")
(license license:gpl3)))