1
0
mirror of https://git.savannah.gnu.org/git/guix.git synced 2026-04-06 13:10:33 +02:00

gnu: Remove r-swne.

This package has been abandoned years ago.  It depends on liger, which has
been removed from CRAN on 2024-06-14.  It is unlikely to work with the newer
version of rliger.

* gnu/packages/statistics.scm (r-swne): Remove variable.

Change-Id: Ie7d7b3c9e1726b8219ad816c4b8db7621708c3b2
This commit is contained in:
Ricardo Wurmus
2026-03-16 22:06:52 +01:00
parent 10a1b8079d
commit eb3fce3a00

View File

@@ -1781,60 +1781,6 @@ knowledge integration, designable W and H matrices and multiple forms of
regularizations.")
(license license:bsd-2))))
(define-public r-swne
(let ((commit "05fc3ee4e09b2c34d99c69d3b97cece4c1c34143")
(revision "1"))
(package
(name "r-swne")
(version (git-version "0.6.20" revision commit))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/yanwu2014/swne")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32 "0crlpg9kclbv4v8250p3086a3lk6f2hcq79psqkdylc1qnrx3kfx"))))
(properties `((upstream-name . "swne")))
(build-system r-build-system)
(propagated-inputs
(list r-fnn
r-ggplot2
r-ggrepel
r-hash
r-ica
r-igraph
r-irlba
r-jsonlite
r-rliger
r-mass
r-matrix
r-mgcv
r-nnlm ;not listed but required at install time
r-plyr
r-proxy
r-rcolorbrewer
r-rcpp
r-rcpparmadillo
r-rcppeigen
r-reshape
r-reshape2
r-snow
r-umap
r-usedist))
(home-page "https://github.com/yanwu2014/swne")
(synopsis "Visualize high dimensional datasets")
(description
"@dfn{Similarity Weighted Nonnegative Embedding} (SWNE) is a method for
visualizing high dimensional datasets. SWNE uses Nonnegative Matrix
Factorization to decompose datasets into latent factors, projects those
factors onto 2 dimensions, and embeds samples and key features in 2 dimensions
relative to the factors. SWNE can capture both the local and global dataset
structure, and allows relevant features to be embedded directly onto the
visualization, facilitating interpretation of the data.")
(license license:gpl2))))
(define-public r-languageserver
(let ((commit "004da9388f9b19990f031c8dc9b527fb406378ba")
(revision "1"))