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gnu: macs-3: Update to 3.0.4.
* gnu/packages/bioinformatics.scm (macs-3): Update to 3.0.4. [arguments] <test-flags>: Skip one test. Change-Id: I7bb990fbaa25bdb3a1f4047cc65a581ffdcd59f7
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@@ -9904,29 +9904,39 @@ sequencing tag position and orientation.")
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(define-public macs-3
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(package
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(name "macs")
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(version "3.0.3")
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(source (origin
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(method git-fetch)
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(uri (git-reference
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(url "https://github.com/macs3-project/MACS")
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(commit (string-append "v" version))
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(recursive? #true)))
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(file-name (git-file-name name version))
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(sha256
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(base32
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"08hi0a2a0md9gfg7jc75wxv69rggv2yqfd1hyrg4mi5bhi712m0v"))))
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(version "3.0.4")
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(source
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(origin
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(method git-fetch)
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(uri (git-reference
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(url "https://github.com/macs3-project/MACS")
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(commit (string-append "v" version))
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(recursive? #true)))
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(file-name (git-file-name name version))
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(sha256
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(base32 "16cv6bvvppi0z69r5l357ai8x4jg61rx8xrvcapk1wz6mh9naf5s"))))
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(build-system pyproject-build-system)
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(arguments
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(list
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#:test-flags
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;; AssertionError: np.float32(1.0) != np.float64(-1.0)
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;; calculated step by step:
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;; 6.559423e-18
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;; expected:
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;; -2.98155597e-18
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#~(list (string-append "--deselect=test/test_SignalProcessing.py::"
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"Test_maxima::test_implement_smooth_here"))))
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(native-inputs
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(list python-cython
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python-pytest
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python-setuptools
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zlib))
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(propagated-inputs
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(list python-cykhash
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python-hmmlearn
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python-numpy
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python-scikit-learn
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python-scipy))
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(native-inputs
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(list python-cython
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python-pytest
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python-setuptools
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zlib))
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(home-page "https://github.com/macs3-project/MACS")
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(synopsis "Model based analysis for ChIP-Seq data")
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(description
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