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3434 Commits

Author SHA1 Message Date
Ricardo Wurmus
eb3fce3a00 gnu: Remove r-swne. 
This package has been abandoned years ago.  It depends on liger, which has
been removed from CRAN on 2024-06-14.  It is unlikely to work with the newer
version of rliger.

* gnu/packages/statistics.scm (r-swne): Remove variable.

Change-Id: Ie7d7b3c9e1726b8219ad816c4b8db7621708c3b2
 2026-04-02 07:37:08 +02:00
Ricardo Wurmus
373064a976 gnu: r-with-tests, r-minimal: Update to 4.5.3. 
* gnu/packages/statistics.scm (r-with-tests, r-minimal): Update to 4.5.3.

Change-Id: I34bf7bf5706192d7c90f9f29cb1f9cfcde35b7fb
 2026-04-02 07:37:05 +02:00
Nicolas Graves
23c5d19ef8 gnu: python-dcor: Use option override. 
* gnu/packages/statistics.scm (python-dcor)[arguments]
<#:phases>: Drop them.
<#:test-flags>: Use option override.

Change-Id: Ie5598a081e892074c4b5a794fa1ea3b184686057
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2026-03-20 14:11:39 +00:00
Ludovic Courtès
2a50c9598b gnu: Reference the inherited ‘arguments’ value. 
This commit was made by running this command:

  sed -e's/substitute-keyword-arguments (package-arguments [a-zA-Z0-9-]\+)/substitute-keyword-arguments arguments/g' -i gnu/packages/*.scm

… and then:

  1. reverting changes from ‘gnu/packages/rust.scm’ and
     ‘gnu/packages/java.scm’ since they would incur derivation changes and/or
     breakage;
  2. reverting the change for ‘gcc-final’ in ‘gnu/packages/commencement.scm’;
  3. reverting the change for ‘onnx-optimizer’, ‘openquest’, and ‘certbot’,
     which use ‘substitute-keyword-arguments’ for arguments that are not
     inherited (and thus ‘arguments’ would be unbound);
  4. reverting the change for ‘insight-toolkit-legacy’ and ‘wine64-staging’
     which make bogus assumptions about inherited arguments.

Change-Id: I122a7cf517b6b63cae38944b5d33ade4b1f5a89c
 2026-03-20 13:27:15 +01:00
Yelninei
17f96e24db gnu: pspp: Use libc-utf-8-locales. 
* gnu/packages/statistics.scm (pspp)[native-inputs]: Replace
glibc-locales with libc-utf8-locales-for-target.

Change-Id: Ie036b0ee833fb9dec237e4914a8c4ac3a7c96ac3
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2026-03-19 15:32:45 +01:00
Ricardo Wurmus
c2a92688a9 gnu: r-tsne: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-tsne): Move from here...
* gnu/packages/cran.scm (r-tsne): ...to here.

Change-Id: I50f0b37af9c894e738ebe56726f70a563f1b9ec0
 2026-03-07 11:57:24 +01:00
Ricardo Wurmus
4ca3126412 gnu: r-trimcluster: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-trimcluster): Move from here...
* gnu/packages/cran.scm (r-trimcluster): ...to here.

Change-Id: I353868527c835623fd18ff6123f2b4234284f7d2
 2026-03-07 11:57:24 +01:00
Ricardo Wurmus
c9942b9c85 gnu: r-tmvnsim: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-tmvnsim): Move from here...
* gnu/packages/cran.scm (r-tmvnsim): ...to here.

Change-Id: I57b54ad1ff2db25e3dcfa5711110fb79baa59e81
 2026-03-07 11:57:23 +01:00
Ricardo Wurmus
2283d0f242 gnu: r-tidyselect: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-tidyselect): Move from here...
* gnu/packages/cran.scm (r-tidyselect): ...to here.

Change-Id: I4c38afa9a6bb029c2fdd6bd142d8a9e0c5d881f8
 2026-03-07 11:57:23 +01:00
Ricardo Wurmus
8662f4fbca gnu: r-tidyr: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-tidyr): Move from here...
* gnu/packages/cran.scm (r-tidyr): ...to here.

Change-Id: Ief68dbda79958e88c9d25a6c2fe79b5d0094eb94
 2026-03-07 11:57:23 +01:00
Ricardo Wurmus
b0ff234c69 gnu: r-tibble: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-tibble): Move from here...
* gnu/packages/cran.scm (r-tibble): ...to here.

Change-Id: I1f37fdca754c850cbb180d2c39b3d94d45b00a19
 2026-03-07 11:57:23 +01:00
Ricardo Wurmus
782f6f1fab gnu: r-testthat: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-testthat): Move from here...
* gnu/packages/cran.scm (r-testthat): ...to here.

Change-Id: Ie9ba24c0eb48f284c5d82fb0a0d0eabaee3d34ea
 2026-03-07 11:57:23 +01:00
Ricardo Wurmus
aab3612f8d gnu: r-tclust: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-tclust): Move from here...
* gnu/packages/cran.scm (r-tclust): ...to here.

Change-Id: Ic9e03d1bd07792cf0c8568dc9bb25fcab95da8fb
 2026-03-07 11:57:23 +01:00
Ricardo Wurmus
57e31e46c3 gnu: r-synchronicity: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-synchronicity): Move from here...
* gnu/packages/cran.scm (r-synchronicity): ...to here.

Change-Id: I5cf0a6327186e4b7f9f50c01c0900017090d7f6d
 2026-03-07 11:57:23 +01:00
Ricardo Wurmus
57d805506d gnu: r-statmod: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-statmod): Move from here...
* gnu/packages/cran.scm (r-statmod): ...to here.

Change-Id: I85e1af6c05d243b0f29cb5befc5f871c36e7e78c
 2026-03-07 11:57:23 +01:00
Ricardo Wurmus
8861b359ed gnu: r-sparsem: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-sparsem): Move from here...
* gnu/packages/cran.scm (r-sparsem): ...to here.

Change-Id: I884f50de0b1f6c4d7b398456a91605f80c0dc84e
 2026-03-07 11:57:23 +01:00
Ricardo Wurmus
efea94fa45 gnu: r-sourcetools: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-sourcetools): Move from here...
* gnu/packages/cran.scm (r-sourcetools): ...to here.

Change-Id: I3ab0bcfbca1d1835fa84729d71febab0f1048d85
 2026-03-07 11:57:23 +01:00
Ricardo Wurmus
de5988f5d4 gnu: r-snow: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-snow): Move from here...
* gnu/packages/cran.scm (r-snow): ...to here.

Change-Id: Idec2db0264ae8ce666596be3fa0427568249b591
 2026-03-07 11:57:22 +01:00
Ricardo Wurmus
f82a5e3a0c gnu: r-sn: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-sn): Move from here...
* gnu/packages/cran.scm (r-sn): ...to here.

Change-Id: I53e34aa96c69d861ff72fd89fdae52c7053a8a94
 2026-03-07 11:57:22 +01:00
Ricardo Wurmus
873ab88f39 gnu: r-simr: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-simr): Move from here...
* gnu/packages/cran.scm (r-simr): ...to here.

Change-Id: I2a2a5c700a1177e260fc70a512737114eb32b4f6
 2026-03-07 11:57:22 +01:00
Ricardo Wurmus
461e3feaac gnu: r-sfsmisc: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-sfsmisc): Move from here...
* gnu/packages/cran.scm (r-sfsmisc): ...to here.

Change-Id: Ia11e766e872444e4c4d1f542f609d4555b1503b0
 2026-03-07 11:57:22 +01:00
Ricardo Wurmus
10eae73bc6 gnu: r-segmented: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-segmented): Move from here...
* gnu/packages/cran.scm (r-segmented): ...to here.

Change-Id: I2f4e9adb8c8a6739ecf6a5ff786a71150ca177ff
 2026-03-07 11:57:22 +01:00
Ricardo Wurmus
728222ef7a gnu: r-vpc: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-vpc): Move from here...
* gnu/packages/cran.scm (r-vpc): ...to here.

Change-Id: I76ace8ad2afefc20bf3b6aa6ea0d215b69065a3b
 2026-03-07 11:57:22 +01:00
Ricardo Wurmus
deee09590e gnu: r-rversions: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-rversions): Move from here...
* gnu/packages/cran.scm (r-rversions): ...to here.

Change-Id: I84f1264333cd5750af9c68963b579e988df2458e
 2026-03-07 11:57:22 +01:00
Ricardo Wurmus
45cffdc087 gnu: r-runit: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-runit): Move from here...
* gnu/packages/cran.scm (r-runit): ...to here.

Change-Id: Ibc73a6f5299408ecff5a55a2043f1def973d6a94
 2026-03-07 11:57:22 +01:00
Ricardo Wurmus
559bc2611f gnu: r-rtsne: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-rtsne): Move from here...
* gnu/packages/cran.scm (r-rtsne): ...to here.

Change-Id: If7162c5d2bb248aee907b021e7c7be12142a940d
 2026-03-07 11:57:22 +01:00
Ricardo Wurmus
ef1fbeb61a gnu: r-rstudioapi: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-rstudioapi): Move from here...
* gnu/packages/cran.scm (r-rstudioapi): ...to here.

Change-Id: I3f7861d6978a16fe7946ae15f2908d66388ac53a
 2026-03-07 11:57:22 +01:00
Ricardo Wurmus
30b2838df4 gnu: r-rsqlite: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-rsqlite): Move from here...
* gnu/packages/cran.scm (r-rsqlite): ...to here.

Change-Id: I8124d4d669fbf8199e1b92d1428bd508a87d8a68
 2026-03-07 11:57:21 +01:00
Ricardo Wurmus
7202bcddf2 gnu: r-rrcov: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-rrcov): Move from here...
* gnu/packages/cran.scm (r-rrcov): ...to here.

Change-Id: I6a6ad60b8b74c66433ef8807c2244d70fceb32ef
 2026-03-07 11:57:21 +01:00
Ricardo Wurmus
0666e8f505 gnu: r-rprojroot: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-rprojroot): Move from here...
* gnu/packages/cran.scm (r-rprojroot): ...to here.

Change-Id: I3ff698e25672459ddc8b8d03fef21804d5d7440b
 2026-03-07 11:57:21 +01:00
Ricardo Wurmus
868c846d04 gnu: r-roxygen2: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-roxygen2): Move from here...
* gnu/packages/cran.scm (r-roxygen2): ...to here.

Change-Id: I012394d29596b2f76fd48b3b1894e317b806e3f5
 2026-03-07 11:57:21 +01:00
Ricardo Wurmus
0118332069 gnu: r-rocr: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-rocr): Move from here...
* gnu/packages/cran.scm (r-rocr): ...to here.

Change-Id: I9daabfe049a5dd6c96d09e1cda32f7036fc8d56a
 2026-03-07 11:57:21 +01:00
Ricardo Wurmus
265cca0162 gnu: r-robustbase: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-robustbase): Move from here...
* gnu/packages/cran.scm (r-robustbase): ...to here.

Change-Id: Iad59f6a5cf5e528b88056dc2a3db79b63f6d3f68
 2026-03-07 11:57:21 +01:00
Ricardo Wurmus
508104dc7a gnu: r-robust: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-robust): Move from here...
* gnu/packages/cran.scm (r-robust): ...to here.

Change-Id: I09cdf75bf7f0432dc6d3e91952dc0943903758ab
 2026-03-07 11:57:21 +01:00
Ricardo Wurmus
4134861df1 gnu: r-rngtools: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-rngtools): Move from here...
* gnu/packages/cran.scm (r-rngtools): ...to here.

Change-Id: I2c6db225baa00fb32212e68dbabe405b4352442c
 2026-03-07 11:57:21 +01:00
Ricardo Wurmus
003bc33069 gnu: r-rmarkdown: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-rmarkdown): Move from here...
* gnu/packages/cran.scm (r-rmarkdown): ...to here.

Change-Id: I2e1af52f25378236c1fcc0cdffd96e972442c7c2
 2026-03-07 11:57:20 +01:00
Ricardo Wurmus
1ca4675b5d gnu: r-rlrsim: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-rlrsim): Move from here...
* gnu/packages/cran.scm (r-rlrsim): ...to here.

Change-Id: I13fa5af69ebe38ae5f035d0d76eeb0ef1b4518ee
 2026-03-07 11:57:20 +01:00
Ricardo Wurmus
7f92fbe75c gnu: r-rlang: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-rlang): Move from here...
* gnu/packages/cran.scm (r-rlang): ...to here.

Change-Id: Ib6a057009a73e8cdca98501ce3f7c9dce2d14a03
 2026-03-07 11:57:20 +01:00
Ricardo Wurmus
98ef04b635 gnu: r-rematch: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-rematch): Move from here...
* gnu/packages/cran.scm (r-rematch): ...to here.

Change-Id: I7d2253a4f5e4fcfc4bcbbf09fc55a860f8bb2cc7
 2026-03-07 11:57:20 +01:00
Ricardo Wurmus
51bce6f7c7 gnu: r-registry: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-registry): Move from here...
* gnu/packages/cran.scm (r-registry): ...to here.

Change-Id: Ibbf5dc09ed976c6b9b52ad00c9cea11954d14127
 2026-03-07 11:57:20 +01:00
Ricardo Wurmus
122f7df92c gnu: r-reghelper: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-reghelper): Move from here...
* gnu/packages/cran.scm (r-reghelper): ...to here.

Change-Id: Id4aa8573a6ff5422b0a245cfdd3953027c9fbe8c
 2026-03-07 11:57:20 +01:00
Ricardo Wurmus
95e6194508 gnu: r-readr: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-readr): Move from here...
* gnu/packages/cran.scm (r-readr): ...to here.

Change-Id: I981d285d495221d140e4aa9e535dfc93d16c7799
 2026-03-07 11:57:20 +01:00
Ricardo Wurmus
17848f9f50 gnu: r-rcurl: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-rcurl): Move from here...
* gnu/packages/cran.scm (r-rcurl): ...to here.

Change-Id: I848d7f3231a301eec9391425931d0747a7d9b28f
 2026-03-07 11:57:20 +01:00
Ricardo Wurmus
65d6828c51 gnu: r-rcppprogress: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-rcppprogress): Move from here...
* gnu/packages/cran.scm (r-rcppprogress): ...to here.

Change-Id: Icd93fa7c7f87a9660f0d29e7fea3c29c1de79a52
 2026-03-07 11:57:20 +01:00
Ricardo Wurmus
7be144c8f2 gnu: r-rcppeigen: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-rcppeigen): Move from here...
* gnu/packages/cran.scm (r-rcppeigen): ...to here.

Change-Id: I80f7ec5a173c88f651da85693fd622f801f57e90
 2026-03-07 11:57:19 +01:00
Ricardo Wurmus
952d2905c1 gnu: r-rcpparmadillo: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-rcpparmadillo): Move from here...
* gnu/packages/cran.scm (r-rcpparmadillo): ...to here.

Change-Id: I73df5cfc6eb2a4b10d94b047048b364ab8e59fe2
 2026-03-07 11:57:19 +01:00
Ricardo Wurmus
35798dfef3 gnu: r-r-utils: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-r-utils): Move from here...
* gnu/packages/cran.scm (r-r-utils): ...to here.

Change-Id: Iaa0230927a00feb9ce61a742cdc9d8f62efc07eb
 2026-03-07 11:57:19 +01:00
Ricardo Wurmus
40a3bbbf0d gnu: r-r-rsp: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-r-rsp): Move from here...
* gnu/packages/cran.scm (r-r-rsp): ...to here.

Change-Id: I191366043b56b99f7cac306e195dd15e51ab6cd0
 2026-03-07 11:57:19 +01:00
Ricardo Wurmus
daab4a2229 gnu: r-r-methodss3: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-r-methodss3): Move from here...
* gnu/packages/cran.scm (r-r-methodss3): ...to here.

Change-Id: Ib7fdf6958bc0d9dd76c6cf1a5cac00164c175c63
 2026-03-07 11:57:19 +01:00
Ricardo Wurmus
3d8d52d23f gnu: r-r-oo: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-r-oo): Move from here...
* gnu/packages/cran.scm (r-r-oo): ...to here.

Change-Id: I7fb64b7e84dada6c146f5b03ed7916dea2745c34
 2026-03-07 11:57:19 +01:00