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Author SHA1 Message Date
Ricardo Wurmus 055d78899c gnu: r-datawizard: Update to 1.3.0. 
* gnu/packages/cran.scm (r-datawizard): Update to 1.3.0.

Change-Id: Ia5c7de0061a41cb520d3c4a0d2f8805b6a13e2ed
 2025-11-29 12:19:23 +01:00
Ricardo Wurmus 55e5328ee4 gnu: r-data-table: Update to 1.17.8. 
* gnu/packages/cran.scm (r-data-table): Update to 1.17.8.

Change-Id: I5f96fc77e3d41fdfe594fc6f507d8a26637c5319
 2025-11-29 12:19:23 +01:00
Ricardo Wurmus 1cdc3b970d gnu: r-cutpointr: Update to 1.2.1. 
* gnu/packages/cran.scm (r-cutpointr): Update to 1.2.1.
[native-inputs]: Add r-mgcv.

Change-Id: I8c040fb3ab1bca95e7a528a9d4b051a26205174d
 2025-11-29 12:19:23 +01:00
Ricardo Wurmus bf1d7a264c gnu: r-cubist: Update to 0.5.1. 
* gnu/packages/cran.scm (r-cubist): Update to 0.5.1.

Change-Id: Ifaf8a81635db469c479ae0e29ef06bee6f2133b7
 2025-11-29 12:19:23 +01:00
Ricardo Wurmus b0253bd437 gnu: r-crew: Update to 1.3.0. 
* gnu/packages/cran.scm (r-crew): Update to 1.3.0.
[propagated-inputs]: Remove r-getip; add r-collections.

Change-Id: I97b3c15e31f9edc50405f82089b7f8acfcb058a2
 2025-11-29 12:19:23 +01:00
Ricardo Wurmus fa57a71b6f gnu: r-cowplot: Update to 1.2.0. 
* gnu/packages/cran.scm (r-cowplot): Update to 1.2.0.
[native-inputs]: Add r-vdiffr.

Change-Id: Ifbc5ea38111030fb58c47e8e89d74a85854924d9
 2025-11-29 12:19:22 +01:00
Ricardo Wurmus 6088f9ef01 gnu: r-correlation: Update to 0.8.8. 
* gnu/packages/cran.scm (r-correlation): Update to 0.8.8.

Change-Id: Ibecdd658f43031ccb573db5483aeacd67447ceec
 2025-11-29 12:19:22 +01:00
Ricardo Wurmus d8ebfb9239 gnu: r-collections: Update to 0.3.9. 
* gnu/packages/cran.scm (r-collections): Update to 0.3.9.

Change-Id: If0dc6db0648769638373e80d0ad8c3f7a0976fa8
 2025-11-29 12:19:22 +01:00
Ricardo Wurmus 06917a7385 gnu: r-collapse: Update to 2.1.4. 
* gnu/packages/cran.scm (r-collapse): Update to 2.1.4.

Change-Id: Ie97af86bf82d48abc7b937ffb2bb5f5c68682db7
 2025-11-29 12:19:22 +01:00
Ricardo Wurmus 648d14d387 gnu: r-compquadform: Update to 1.4.4. 
* gnu/packages/cran.scm (r-compquadform): Update to 1.4.4.

Change-Id: If7eb83c8cff982933821a928a7d9acd98f1abfef
 2025-11-29 12:19:22 +01:00
Ricardo Wurmus e3e02eb755 gnu: r-commonmark: Update to 2.0.0. 
* gnu/packages/cran.scm (r-commonmark): Update to 2.0.0.
[native-inputs]: Add r-xml2.

Change-Id: I0765345d99a3ef5caabc964677ab7beb7925c61a
 2025-11-29 12:19:22 +01:00
Ricardo Wurmus 039523fd0c gnu: r-celestial: Update to 1.5.8. 
* gnu/packages/cran.scm (r-celestial): Update to 1.5.8.
[propagated-inputs]: Add r-rcpp.

Change-Id: Ie74beee2c87c57dafafc98ebd6aca383b577782e
 2025-11-29 12:19:22 +01:00
Ricardo Wurmus 7e3386cd27 gnu: r-clubsandwich: Update to 0.6.1. 
* gnu/packages/cran.scm (r-clubsandwich): Update to 0.6.1.

Change-Id: Id2170ee37336470f3ba568165605325f80c79386
 2025-11-29 12:19:22 +01:00
Ricardo Wurmus 2d8358c30f gnu: r-checkmate: Update to 2.3.3. 
* gnu/packages/cran.scm (r-checkmate): Update to 2.3.3.

Change-Id: I028bb6f16d65acbcf186411d904a8ab78edd4606
 2025-11-29 12:19:22 +01:00
Ricardo Wurmus 20959f63bf gnu: r-cftime: Update to 1.7.2. 
* gnu/packages/cran.scm (r-cftime): Update to 1.7.2.
[native-inputs]: Remove r-knitr.

Change-Id: I1ba605524e33757908cb9181391064f63cac9ed9
 2025-11-29 12:19:21 +01:00
Ricardo Wurmus ac5599c51d gnu: r-castor: Update to 1.8.4. 
* gnu/packages/cran.scm (r-castor): Update to 1.8.4.

Change-Id: I12a9f20004839632d54107c99ac6b228bca39909
 2025-11-29 12:19:21 +01:00
Ricardo Wurmus 8d6427457e gnu: r-cardx: Update to 0.3.0. 
* gnu/packages/cran.scm (r-cardx): Update to 0.3.0.

Change-Id: Ibd97e8c51bd8938b70b8449b87673b14a40fd1b8
 2025-11-29 12:19:21 +01:00
Ricardo Wurmus 6037e848dd gnu: r-cards: Update to 0.7.0. 
* gnu/packages/cran.scm (r-cards): Update to 0.7.0.

Change-Id: Ic3733bfffa1f6a6dac1f7a6ca646d85a5f122138
 2025-11-29 12:19:21 +01:00
Ricardo Wurmus a41d96b6c0 gnu: r-cairo: Update to 1.7-0. 
* gnu/packages/cran.scm (r-cairo): Update to 1.7-0.

Change-Id: I07879d2f1a0ab4453418612c237b3f100ded7d65
 2025-11-29 12:19:21 +01:00
Ricardo Wurmus 159c816ced gnu: r-broom-helpers: Update to 1.22.0. 
* gnu/packages/cran.scm (r-broom-helpers): Update to 1.22.0.

Change-Id: I5e1ad17495f593b3284f2f06a3d88ba62840a70a
 2025-11-29 12:19:21 +01:00
Ricardo Wurmus e8852c0150 gnu: r-boot: Update to 1.3-32. 
* gnu/packages/cran.scm (r-boot): Update to 1.3-32.

Change-Id: I8d63aa47c7fdc2643d98312d6f1d706a44fdeca0
 2025-11-29 12:19:21 +01:00
Ricardo Wurmus 2929ba6a25 gnu: r-bigstatsr: Update to 1.6.2. 
* gnu/packages/cran.scm (r-bigstatsr): Update to 1.6.2.

Change-Id: I84810bff90b846b5ce88220c649c698ebef63178
 2025-11-29 12:19:21 +01:00
Ricardo Wurmus 3230848a7c gnu: r-bigassertr: Update to 0.1.7. 
* gnu/packages/cran.scm (r-bigassertr): Update to 0.1.7.

Change-Id: Ief962adf82e6ae38e28d32c85f074eda8e558bbb
 2025-11-29 12:19:20 +01:00
Ricardo Wurmus 78cb3a3480 gnu: r-betareg: Update to 3.2-4. 
* gnu/packages/cran.scm (r-betareg): Update to 3.2-4.

Change-Id: Ice456cb0c83f7842863cc1f65c43754e42c2e2ef
 2025-11-29 12:19:20 +01:00
Ricardo Wurmus d5e2b83e85 gnu: r-batchjobs: Update to 1.10. 
* gnu/packages/cran.scm (r-batchjobs): Update to 1.10.

Change-Id: Ic31578231b35c53ce992a499b50f34b568a9b9be
 2025-11-29 12:19:20 +01:00
Ricardo Wurmus dcb7418e57 gnu: r-aster: Update to 1.3-6. 
* gnu/packages/cran.scm (r-aster): Update to 1.3-6.
[native-inputs]: Add r-knitr.

Change-Id: I809d9eeefa683e13e8faaa78027c99ddcfd0b8fc
 2025-11-29 12:19:20 +01:00
Ricardo Wurmus e49c5f421c gnu: r-acepack: Update to 1.6.3. 
* gnu/packages/cran.scm (r-acepack): Update to 1.6.3.

Change-Id: I9671374c0ea51e5807cb4f7520c74663b1fcf1f8
 2025-11-29 12:19:20 +01:00
Ricardo Wurmus 4274208512 gnu: r-activepathways: Update to 2.0.6. 
* gnu/packages/bioconductor.scm (r-activepathways): Update to 2.0.6.

Change-Id: Ifec83172122f35a4832da06922f9ecbafb4e83c4
 2025-11-29 12:19:20 +01:00
Ricardo Wurmus 6e1add28c2 gnu: r-classdiscovery: Update to 3.4.9. 
* gnu/packages/bioconductor.scm (r-classdiscovery): Update to 3.4.9.

Change-Id: If1c2b57a45c590d6603fd5ee05b8c8bcc9b6e8f2
 2025-11-29 12:19:20 +01:00
Ricardo Wurmus 4efcf6cb63 gnu: r-ggpicrust2: Update to 2.5.2. 
* gnu/packages/bioconductor.scm (r-ggpicrust2): Update to 2.5.2.
[native-inputs]: Remove r-knitr; add r-devtools.

Change-Id: Ifcfb112ef6a8a4d79c4552a314f7c77c0e24e084
 2025-11-29 12:19:20 +01:00
Ricardo Wurmus 7f220a8605 gnu: r-ggm: Update to 2.5.2. 
* gnu/packages/bioconductor.scm (r-ggm): Update to 2.5.2.

Change-Id: I9f30584803ef95b6eb5b2a7109c3884522492422
 2025-11-29 12:19:20 +01:00
Ricardo Wurmus 393e9aa3c2 gnu: r-valr: Update to 0.8.4. 
* gnu/packages/bioconductor.scm (r-valr): Update to 0.8.4.

Change-Id: Ic65675c42ed06fa74f1c147245c81edac29a0d78
 2025-11-29 12:19:19 +01:00
Ricardo Wurmus 26e7763e78 gnu: r-scgate: Update to 1.7.2. 
* gnu/packages/bioconductor.scm (r-scgate): Update to 1.7.2.
[propagated-inputs]: Add r-colorspace.

Change-Id: If34d7a5d7e15bd4fd811b69486a6aa62502cf8c5
 2025-11-29 12:19:19 +01:00
Ricardo Wurmus 48eb1967cd gnu: r-restfulr: Update to 0.0.16. 
* gnu/packages/bioconductor.scm (r-restfulr): Update to 0.0.16.
[native-inputs]: Remove r-runit.

Change-Id: I0b1a7e0bc66bb1d76c9b02000ced608b271d2702
 2025-11-29 12:19:19 +01:00
Ricardo Wurmus 5c193342bf gnu: r-numbat: Update to 1.5.1. 
* gnu/packages/bioconductor.scm (r-numbat): Update to 1.5.1.

Change-Id: If15e6283f5790305bf2408ff8e0b3acb95370286
 2025-11-29 12:19:19 +01:00
Ricardo Wurmus 79c2fb3122 gnu: r-netgsa: Update to 4.0.6. 
* gnu/packages/bioconductor.scm (r-netgsa): Update to 4.0.6.

Change-Id: Ieb200d7421533223b02de5d91e949c26911dc94d
 2025-11-29 12:19:19 +01:00
Ricardo Wurmus ddb133e9ac gnu: r-infusion: Update to 2.3.0. 
* gnu/packages/bioconductor.scm (r-infusion): Update to 2.3.0.

Change-Id: Ic07a137434a80413034e1bc25c722cb06d912a2a
 2025-11-29 12:19:19 +01:00
Ricardo Wurmus 61d18d715f gnu: r-dsb: Update to 2.0.1. 
* gnu/packages/bioconductor.scm (r-dsb): Update to 2.0.1.

Change-Id: Icb09c4b4d69253c0658279f96ba360ac440dd6eb
 2025-11-29 12:19:19 +01:00
Ricardo Wurmus 9917937709 gnu: r-cpp11bigwig: Update to 0.1.2. 
* gnu/packages/bioconductor.scm (r-cpp11bigwig): Update to 0.1.2.

Change-Id: I7254d652707c0288ace602d00345db0dba5aa0c4
 2025-11-29 12:19:19 +01:00
Ricardo Wurmus 05cd678b56 gnu: r-abn: Update to 3.1.9. 
* gnu/packages/bioconductor.scm (r-abn): Update to 3.1.9.
[inputs]: Add jags.
[native-inputs]: Add r-biocmanager, r-boot, and r-brglm.

Change-Id: Ia6d6cee65f5a4d33d172c9927c89341d73697b23
 2025-11-29 12:19:19 +01:00
Ricardo Wurmus 72daa56a84 gnu: r-emdbook: Update to 1.3.14. 
* gnu/packages/cran.scm (r-emdbook): Update to 1.3.14.
[native-inputs]: Remove r-testthat.

Change-Id: Ie4b63e996110aba327d57ced36243464919a07b8
 2025-11-29 12:19:19 +01:00
Ricardo Wurmus de97154d21 gnu: r-invgamma: Update to 1.2. 
* gnu/packages/cran.scm (r-invgamma): Update to 1.2.
[native-inputs]: Add r-testthat.

Change-Id: Iad48d0f2b5a5ba3d39a77670a155625e6dc4736f
 2025-11-29 12:19:18 +01:00
Ricardo Wurmus a328e799e7 gnu: r-futile-logger: Adjust to removed test procedures in testthat. 
* gnu/packages/cran.scm (r-futile-logger)[arguments]: Add phase
'testthat-compatibility.

Change-Id: Ia83bc9cbbc2e8fe513904d6565648c18f69f36cd
 2025-11-29 12:19:18 +01:00
Ricardo Wurmus 6de8101712 gnu: r-qtl2: Update to 0.38. 
* gnu/packages/cran.scm (r-qtl2): Update to 0.38.
[native-inputs]: Add r-vdiffr.
[properties]: Record updater-extra-native-inputs.

Change-Id: I5622b9550cca99866cfce961cba355a1dae557e5
 2025-11-29 12:19:18 +01:00
Ricardo Wurmus f1ca8f7ea5 gnu: r-dt: Update to 0.34.0. 
* gnu/packages/cran.scm (r-dt): Update to 0.34.0.
[native-inputs]: Add r-tibble.
[properties]: Record updater-extra-propagated-inputs.

Change-Id: If0939ae3881c5a2fc8f58fb4b36ff781617c1f0d
 2025-11-29 12:19:18 +01:00
Ricardo Wurmus f6b29b97b6 gnu: r-ggformula: Update to 1.0.0. 
* gnu/packages/cran.scm (r-ggformula): Update to 1.0.0.
[properties]: Record updater-ignored-native-inputs.
[propagated-inputs]: Add r-ggiraph.
[native-inputs]: Add r-dplyr and r-quarto; remove r-knitr.

Change-Id: Ic365c8bc96a980c9664c38c6ee4bf4f98bf1c27b
 2025-11-29 12:19:18 +01:00
Ricardo Wurmus 808bf3f76d gnu: r-ggplot2: Update to 4.0.0. 
* gnu/packages/cran.scm (r-ggplot2): Update to 4.0.0.
[propagated-inputs]: Remove r-glue, r-mgcv, and r-tibble; add r-s7.

Change-Id: I8b49c40b09cbd7e645549469c3986259d9a2dbfc
 2025-11-29 12:19:18 +01:00
Ricardo Wurmus 9dbd122aa6 gnu: r-workflows: Update to 1.3.0. 
* gnu/packages/cran.scm (r-workflows): Update to 1.3.0.
[properties]: Record updater-ignored-native-inputs.
[arguments]: Add phase 'skip-bad-tests.
[native-inputs]: Add r-tailor.

Change-Id: Idf8ac2d0a9cb600ddfb5118de15d1232dc5ab1f2
 2025-11-29 12:19:18 +01:00
Ricardo Wurmus b481eacbab gnu: r-rio: Update to 1.2.4. 
* gnu/packages/cran.scm (r-rio): Update to 1.2.4.
[properties]: Record updater-extra-native-inputs.
[native-inputs]: Remove r-stringi; add r-arrow, r-jpeg, r-readods, and
r-withr.

Change-Id: I1a95933eb4a1423ba31e4b0a51f31c37c69cfc22
 2025-11-29 12:19:18 +01:00
Ricardo Wurmus e548d95712 gnu: r-performance: Update to 0.15.2. 
* gnu/packages/cran.scm (r-performance): Update to 0.15.2.
[properties]: Remove updater-extra-native-inputs.
[native-inputs]: Add r-brms, r-car, r-correlation, r-ggdag, r-lavaan, r-nnet,
and r-psych.

Change-Id: Ic21fd28b236882bbf68695a39930621b027561ba
 2025-11-29 12:19:17 +01:00