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Commit Graph

184815 Commits

Author SHA1 Message Date
Ricardo Wurmus
95accbc78f gnu: r-venn: Update to 1.13.
* gnu/packages/cran.scm (r-venn): Update to 1.13.

Change-Id: I9a15a630386f75c1abfa432c5147207885f21e83
2026-04-02 07:37:21 +02:00
Ricardo Wurmus
ce75a3c411 gnu: r-rpart: Update to 4.1.27.
* gnu/packages/cran.scm (r-rpart): Update to 4.1.27.

Change-Id: I9564a9b01a8655cefa79be842eeea7c08b48218f
2026-04-02 07:37:21 +02:00
Ricardo Wurmus
213c1205f5 gnu: r-rmarkdown: Update to 2.31.
* gnu/packages/cran.scm (r-rmarkdown): Update to 2.31.

Change-Id: I44e1bcc16fa763264ce0329d434f505980d98966
2026-04-02 07:37:21 +02:00
Ricardo Wurmus
4cdc295ccd gnu: r-pmml: Update to 2.6.0.
* gnu/packages/cran.scm (r-pmml): Update to 2.6.0.

Change-Id: I30fa5e147d28c4babcbc21011376141cdee9fdb0
2026-04-02 07:37:21 +02:00
Ricardo Wurmus
7969f5281f gnu: r-isva: Update to 1.10.
* gnu/packages/bioconductor.scm (r-isva): Update to 1.10.

Change-Id: I40aee88fee31b47d18526f5ce68fee0b76ab22c7
2026-04-02 07:37:21 +02:00
Ricardo Wurmus
217b643316 gnu: r-irace: Update to 4.4.1.
* gnu/packages/cran.scm (r-irace): Update to 4.4.1.
[arguments]: Skip one test.
[native-inputs]: Add r-highr.

Change-Id: I682d70d68bbf2566a3628138d1291a06810fa30a
2026-04-02 07:37:21 +02:00
Ricardo Wurmus
9d273d6173 gnu: r-archivist: Update to 2.3.9.
* gnu/packages/cran.scm (r-archivist): Update to 2.3.9.
[native-inputs]: Remove r-testthat.

Change-Id: If56a217240aa782dfeebeccca77a677e1e03fa14
2026-04-02 07:37:21 +02:00
Ricardo Wurmus
fa4363ee83 gnu: r-progressr: Update to 0.19.0.
* gnu/packages/cran.scm (r-progressr): Update to 0.19.0.

Change-Id: I5f612300649e9f8d1bd8c7e6e76cb8e824fefa78
2026-04-02 07:37:21 +02:00
Ricardo Wurmus
1222228405 gnu: r-lamw: Update to 2.2.7.
* gnu/packages/cran.scm (r-lamw): Update to 2.2.7.
[native-inputs]: Add r-testthat.

Change-Id: I80da1f9f62430e571da40a02f439e5b0d1afba02
2026-04-02 07:37:21 +02:00
Ricardo Wurmus
b9acb40b90 gnu: r-sourcetools: Update to 0.1.7-2.
* gnu/packages/cran.scm (r-sourcetools): Update to 0.1.7-2.
[native-inputs]: Remove r-testthat.

Change-Id: I997d9111dc5074b88b9e4c70f557d331df5938b6
2026-04-02 07:37:20 +02:00
Ricardo Wurmus
02e7f5bd3c gnu: r-gwascat: Update to 2.42.1.
* gnu/packages/bioconductor.scm (r-gwascat): Update to 2.42.1.
[propagated-inputs]: Remove r-snpstats.

Change-Id: I169b53b7320b89bfd24e19f745752d003e7eba38
2026-04-02 07:37:20 +02:00
Ricardo Wurmus
7ff3cecc72 gnu: r-scater: Update to 1.38.1.
* gnu/packages/bioconductor.scm (r-scater): Update to 1.38.1.

Change-Id: I7ccc3a0c9b5377b4196e7806cba863c691895fa0
2026-04-02 07:37:20 +02:00
Ricardo Wurmus
cadd11f0cd gnu: r-beadarray: Update to 2.60.1.
* gnu/packages/bioconductor.scm (r-beadarray): Update to 2.60.1.

Change-Id: Ie6b49f29346bc7de56484fcf273ff089868d8736
2026-04-02 07:37:20 +02:00
Ricardo Wurmus
e128f915f2 gnu: r-biocviews: Update to 1.78.1.
* gnu/packages/bioconductor.scm (r-biocviews): Update to 1.78.1.

Change-Id: I660d44487d25d7c19ad6cff239024bc5e829599c
2026-04-02 07:37:20 +02:00
Ricardo Wurmus
8b4eaa339a gnu: r-variancepartition: Update to 1.40.2.
* gnu/packages/bioconductor.scm (r-variancepartition): Update to 1.40.2.

Change-Id: Iea9427a9df269d1260b8fdf17a25518865fcb2da
2026-04-02 07:37:20 +02:00
Ricardo Wurmus
69a93344fa gnu: r-cicero: Update to 1.28.3.
* gnu/packages/bioconductor.scm (r-cicero): Update to 1.28.3.

Change-Id: Ia93dd658d5dc9d3ef82702adcfb873b79a9151f0
2026-04-02 07:37:20 +02:00
Ricardo Wurmus
83651e17f9 gnu: r-ggtree: Update to 4.0.5.
* gnu/packages/bioconductor.scm (r-ggtree): Update to 4.0.5.

Change-Id: Id4ae9e94369b63c8e48c760d2c44a101ef413441
2026-04-02 07:37:20 +02:00
Ricardo Wurmus
dc668775f9 gnu: r-tcgautils: Update to 1.30.3.
* gnu/packages/bioconductor.scm (r-tcgautils): Update to 1.30.3.

Change-Id: I755d9857120c38f153696f55368d893cac47baa8
2026-04-02 07:37:20 +02:00
Ricardo Wurmus
057667a9f9 gnu: r-mmuphin: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-mmuphin): Update to 1.24.0.

Change-Id: I6b966eb1c8637e31beffe6af6e44cbff2882ca96
2026-04-02 07:37:19 +02:00
Ricardo Wurmus
e46379066d gnu: r-maaslin2: Update to 1.24.1.
* gnu/packages/bioconductor.scm (r-maaslin2): Update to 1.24.1.

Change-Id: I28de568df289efcadf6afe01badfd0c09f89cb37
2026-04-02 07:37:19 +02:00
Ricardo Wurmus
f5483a2145 gnu: r-gsva: Update to 2.4.8.
* gnu/packages/bioconductor.scm (r-gsva): Update to 2.4.8.

Change-Id: Id9f7f1bb7599d9350e42c2e511e447fad1193501
2026-04-02 07:37:19 +02:00
Ricardo Wurmus
040e86256b gnu: r-arrayqualitymetrics: Update to 3.66.0.
* gnu/packages/bioconductor.scm (r-arrayqualitymetrics): Update to 3.66.0.
[native-inputs]: Add r-biocstyle.

Change-Id: Ia1f0ac427117dbc01ce182190ff749dc578a54ea
2026-04-02 07:37:19 +02:00
Ricardo Wurmus
86ea888ceb gnu: r-biomformat: Update to 1.38.3.
* gnu/packages/bioconductor.scm (r-biomformat): Update to 1.38.3.
[arguments]: Remove phase 'testthat-compatibility.
[propagated-inputs]: Remove r-plyr.

Change-Id: I67e973b606f8135b0c4ef0dbf2d29229d87522a4
2026-04-02 07:37:19 +02:00
Ricardo Wurmus
37a51f7aa8 gnu: r-ragg: Update to 1.5.2.
* gnu/packages/cran.scm (r-ragg): Update to 1.5.2.

Change-Id: I5ae8c7bbfbd540073d5b6d588dcb67a9f7b7885e
2026-04-02 07:37:19 +02:00
Ricardo Wurmus
3f925c1742 gnu: r-mlr3tuning: Update to 1.6.0.
* gnu/packages/cran.scm (r-mlr3tuning): Update to 1.6.0.
[native-inputs]: Add r-processx and r-redux.

Change-Id: I75705cf6c914f6a2c6d737361e1a15fdc4100a87
2026-04-02 07:37:19 +02:00
Ricardo Wurmus
6e42a1de52 gnu: r-mlr3hyperband: Update to 1.1.0.
* gnu/packages/cran.scm (r-mlr3hyperband): Update to 1.1.0.

Change-Id: I6cc091653dc183216e95c50e9e13cb3470e61d14
2026-04-02 07:37:19 +02:00
Ricardo Wurmus
867a4e47d2 gnu: r-mlr3fselect: Update to 1.5.1.
* gnu/packages/cran.scm (r-mlr3fselect): Update to 1.5.1.
[native-inputs]: Add r-processx and r-redux.

Change-Id: I48862e9626d865abfa7a50262823c659c9ffccc7
2026-04-02 07:37:18 +02:00
Ricardo Wurmus
96c4345df7 gnu: r-spatstat-random: Update to 3.4-5.
* gnu/packages/cran.scm (r-spatstat-random): Update to 3.4-5.

Change-Id: Ib2070629f6e45cf334621f6ece875158861309fa
2026-04-02 07:37:18 +02:00
Ricardo Wurmus
10adc2d78f gnu: r-spatstat-geom: Update to 3.7-3.
* gnu/packages/cran.scm (r-spatstat-geom): Update to 3.7-3.

Change-Id: I863be34a03db29fde0a66629781f781f5fe1717d
2026-04-02 07:37:18 +02:00
Ricardo Wurmus
3b76bc387a gnu: r-spatstat-univar: Update to 3.1-7.
* gnu/packages/cran.scm (r-spatstat-univar): Update to 3.1-7.

Change-Id: Ia3ec1510b411161e2beae092dcf6430e0dea87c0
2026-04-02 07:37:18 +02:00
Ricardo Wurmus
b28731fb1e gnu: r-spatstat-explore: Update to 3.8-0.
* gnu/packages/cran.scm (r-spatstat-explore): Update to 3.8-0.

Change-Id: I8ad627713a0a6f1ae5b3063823db1d673f001024
2026-04-02 07:37:18 +02:00
Ricardo Wurmus
289dc72279 gnu: r-forecast: Update to 9.0.2.
* gnu/packages/cran.scm (r-forecast): Update to 9.0.2.

Change-Id: If268eeb89aa431b6b6bee5f186d8eb7453c0fc08
2026-04-02 07:37:18 +02:00
Ricardo Wurmus
f946e3075d gnu: r-showtext: Update to 0.9-8.
* gnu/packages/cran.scm (r-showtext): Update to 0.9-8.

Change-Id: I57ae0e097d95966770780b25854237c5a57b3a7a
2026-04-02 07:37:18 +02:00
Ricardo Wurmus
73d41665ea gnu: r-desolve: Update to 1.42.
* gnu/packages/cran.scm (r-desolve): Update to 1.42.

Change-Id: I37008907439fb7bc83889680daf20bf0824c55f9
2026-04-02 07:37:18 +02:00
Ricardo Wurmus
9550d4f1e0 gnu: r-xgboost: Update to 3.2.1.1.
* gnu/packages/cran.scm (r-xgboost): Update to 3.2.1.1.

Change-Id: Ia4f5b782a97bcc9339808bff801794bac5f82705
2026-04-02 07:37:18 +02:00
Ricardo Wurmus
d3a03f5f1b gnu: r-xml: Update to 3.99-0.23.
* gnu/packages/cran.scm (r-xml): Update to 3.99-0.23.

Change-Id: Ie04df7e29cd71a5adde36166329c36cfcdf521ab
2026-04-02 07:37:17 +02:00
Ricardo Wurmus
98a9de3d58 gnu: r-shinybs: Update to 0.65.0.
* gnu/packages/cran.scm (r-shinybs): Update to 0.65.0.

Change-Id: Ifa7182ecf782d3671a153a8bf1d9fd71593a9a07
2026-04-02 07:37:17 +02:00
Ricardo Wurmus
7844bc3e89 gnu: r-epi: Update to 2.63.
* gnu/packages/cran.scm (r-epi): Update to 2.63.

Change-Id: I083f9836429305c6ff930a41835605a4b6de9938
2026-04-02 07:37:17 +02:00
Ricardo Wurmus
a0f82666a4 gnu: r-splitstackshape: Update to 1.4.8.1.
* gnu/packages/cran.scm (r-splitstackshape): Update to 1.4.8.1.

Change-Id: I65c44c26aad298d1a629a96b8e739c566bf04b65
2026-04-02 07:37:17 +02:00
Ricardo Wurmus
cfb3b43bb0 gnu: r-spatialreg: Update to 1.4-3.
* gnu/packages/cran.scm (r-spatialreg): Update to 1.4-3.
[propagated-inputs]: Remove r-mass; add r-marginaleffects and r-mvtnorm.

Change-Id: If86d37dc4573c250e61720b4a124089e2b583cc8
2026-04-02 07:37:17 +02:00
Ricardo Wurmus
d457d9357d gnu: r-arm: Update to 1.15-2.
* gnu/packages/cran.scm (r-arm): Update to 1.15-2.

Change-Id: I5e270d45e6c398726ddd02ea9fdc14e64c856b95
2026-04-02 07:37:17 +02:00
Ricardo Wurmus
27a57b6732 gnu: r-tmb: Update to 1.9.21.
* gnu/packages/cran.scm (r-tmb): Update to 1.9.21.

Change-Id: I75faf9e4a7c4d15b1b938e8e5c12fe8590b03efb
2026-04-02 07:37:17 +02:00
Ricardo Wurmus
9cba5b8f64 gnu: r-libcoin: Update to 1.0-12.
* gnu/packages/cran.scm (r-libcoin): Update to 1.0-12.

Change-Id: I0ebefb596bd5ebf699f62f35a8a7568bbb55f162
2026-04-02 07:37:17 +02:00
Ricardo Wurmus
ba7575053b gnu: r-tarchetypes: Update to 0.14.1.
* gnu/packages/cran.scm (r-tarchetypes): Update to 0.14.1.

Change-Id: I0d6a2f04ebc882b7e319a66dd5107e9905426b6c
2026-04-02 07:37:16 +02:00
Ricardo Wurmus
fb4acc6495 gnu: r-adbcdrivermanager: Update to 0.22.0-2.
* gnu/packages/cran.scm (r-adbcdrivermanager): Update to 0.22.0-2.

Change-Id: Id56ecadb9455f808545f383cb3c8b11fb1ef724b
2026-04-02 07:37:16 +02:00
Ricardo Wurmus
0522c94732 gnu: r-dyngen: Update to 1.1.0.
* gnu/packages/cran.scm (r-dyngen): Update to 1.1.0.
[propagated-inputs]: Remove r-ggrepel; add r-tidyselect.

Change-Id: I1e9004bad4f9997e4d10180f0f394884380eece3
2026-04-02 07:37:16 +02:00
Ricardo Wurmus
e7cffc7359 gnu: r-leaflet-providers: Update to 3.0.0.
* gnu/packages/cran.scm (r-leaflet-providers): Update to 3.0.0.

Change-Id: Icbba277557c8ade7304e95021a5b7f29c6ef24eb
2026-04-02 07:37:16 +02:00
Ricardo Wurmus
d9309152c9 gnu: r-tinytest: Update to 1.4.3.
* gnu/packages/cran.scm (r-tinytest): Update to 1.4.3.

Change-Id: Id70b7b126bf3594b0b48b87c79028978304682fb
2026-04-02 07:37:16 +02:00
Ricardo Wurmus
6d165f21f9 gnu: r-vctrs: Update to 0.7.2.
* gnu/packages/cran.scm (r-vctrs): Update to 0.7.2.

Change-Id: I22ac4e01023b4e12095f1dcaa93f68e1a1884281
2026-04-02 07:37:16 +02:00
Ricardo Wurmus
55574ef44c gnu: r-xfun: Update to 0.57.
* gnu/packages/cran.scm (r-xfun): Update to 0.57.

Change-Id: I334b4cd1961fdddc47770e03bb52ee8ca1e8e607
2026-04-02 07:37:16 +02:00