tribes/guix
1
0
Fork 1
mirror of https://git.savannah.gnu.org/git/guix.git synced 2026-05-01 06:45:55 +02:00
Code Activity
141,158 Commits 75 Branches 40 Tags
9b193099352c8d730ebb2c8e51cb98ac7d33c579
Commit Graph

141158 Commits

This Branch
This Branch
All Branches
Author SHA1 Message Date
Tobias Geerinckx-Rice 9b19309935 gnu: unrar-free: Update to 0.3.1. 
* gnu/packages/compression.scm (unrar-free): Update to 0.3.1.
[native-inputs, inputs]: Remove input labels.

Change-Id: Ifa0d54ca22819e8e65a8a3140c94bc9063905873
 2024-08-18 02:00:00 +02:00
Nicolas Goaziou 732dac4ce0 gnu: nauty: Update to 2.8.9. 
* gnu/packages/maths.scm (nauty): Update to 2.8.9.
[arguments]<#:phases>: Add a phase for fixing a test.

Change-Id: I854754ab372ef6ae1d5e13e14c0fc8a667177b4d
 2024-08-26 20:57:44 +02:00
Ricardo Wurmus 73ec6ef4c3 gnu: r-yulab-utils: Update to 0.1.7. 
* gnu/packages/cran.scm (r-yulab-utils): Update to 0.1.7.
[propagated-inputs]: Remove r-httr2.

Change-Id: Ib21bdcb122d4999cce48b71604042d4833285081
 2024-08-26 20:31:17 +02:00
Ricardo Wurmus 2a2785c1a6 gnu: r-sungeo: Update to 1.3.0. 
* gnu/packages/cran.scm (r-sungeo): Update to 1.3.0.
[source]: Remove obsolete snippet.
[propagated-inputs]: Remove r-sp; add r-rmapshaper.
[native-inputs]: Add r-codetools.

Change-Id: Iceca0e28314f31e326b7d7f8d4a03a71b770025f
 2024-08-26 20:31:17 +02:00
Ricardo Wurmus 6b10c8c334 gnu: Add r-rmapshaper. 
* gnu/packages/cran.scm (r-rmapshaper): New variable.

Change-Id: Iaef97544772fa75c143a2c68206e11a1533e385b
 2024-08-26 20:31:17 +02:00
Ricardo Wurmus a33c8146d4 gnu: Add r-geojsonsf. 
* gnu/packages/cran.scm (r-geojsonsf): New variable.

Change-Id: I7ffac98fd2e59d3b65d62d38f7e1930647c64e9c
 2024-08-26 20:31:17 +02:00
Ricardo Wurmus 60e9a86ecb gnu: Add r-sfheaders. 
* gnu/packages/cran.scm (r-sfheaders): New variable.

Change-Id: Ia451593fb567ce9e88b5712a30f30ace2186edb2
 2024-08-26 20:31:17 +02:00
Ricardo Wurmus 61eea88dde gnu: Add r-geometries. 
* gnu/packages/cran.scm (r-geometries): New variable.

Change-Id: I290a5cc2bda00859d27c7a91341acb20708c9abc
 2024-08-26 20:31:17 +02:00
Florian Pelz cc4cb24ed5 teams: Remove Matt from their team due to inactivity. 
* etc/teams.scm (Matthew Trzcinski): Remove from the DOCUMENTATION team.

Change-Id: I6ab1f35086a2a1abc7c0436013efe223b44c7867
 2024-08-26 19:11:43 +02:00
Florian Pelz 4aaa0ea06f doc: Remove duplicate search paths instructions. 
* doc/guix.texi (Invoking guix pull): Remove instructions
obsoleted by Binary Installation instructions.

Change-Id: I18274aa8bacd11de8ee72bd83c817f945468cc13
 2024-08-26 18:40:30 +02:00
jgart 4b011ee4ab gnu: trealla: Update to 2.55.26. 
* gnu/packages/prolog.scm (trealla): Update to 2.55.26.

Change-Id: I2a2652d2415d007fabf8974212cd35686336905f
 2024-08-26 10:33:28 -05:00
jgart 714cbc84cf gnu: trealla: Update to 2.55.25. 
* gnu/packages/prolog.scm (trealla): Update to 2.55.25.

Change-Id: I3c00edc6292c9e351ff514d3ca835236aa6c1d7e
 2024-08-26 10:33:28 -05:00
Ricardo Wurmus e6e3f185ac gnu: r-hmmcopy: Update to 1.46.0. 
* gnu/packages/bioconductor.scm (r-hmmcopy): Update to 1.46.0.

Change-Id: I26c091fe4af549b01c98aac0a1fcdb058ff4ea71
 2024-08-26 14:14:07 +02:00
Spencer King 257375d36b gnu: Add r-hmmcopy. 
* gnu/packages/bioconductor.scm (r-hmmcopy): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
Change-Id: Iface547e865609427c356277edc904f3aec386d8
 2024-08-26 14:13:56 +02:00
Spencer King 7578bf8457 gnu: Add r-fuzzyjoin. 
* gnu/pacakges/cran.scm (r-fuzzyjoin): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
Change-Id: I47fd35ac4759c8c9cceaac32a5b78c2306404903
 2024-08-26 12:24:59 +02:00
Ricardo Wurmus b70de89f21 gnu: r-omnipathr: Update to 3.12.3. 
* gnu/packages/bioconductor.scm (r-omnipathr): Update to 3.12.3.

Change-Id: I8ecd13d0d28003bb4ceb54b2c011fe6e8162df66
 2024-08-26 12:17:03 +02:00
Ricardo Wurmus a7b2b67fbc gnu: r-bgeedb: Update to 2.30.1. 
* gnu/packages/bioconductor.scm (r-bgeedb): Update to 2.30.1.

Change-Id: I31f54552b1e12315657f5bd9b8dbef32f3a20066
 2024-08-26 12:17:03 +02:00
Ricardo Wurmus 77d37e4d9f gnu: r-universalmotif: Update to 1.22.2. 
* gnu/packages/bioconductor.scm (r-universalmotif): Update to 1.22.2.

Change-Id: I71e3f29a2ec4b15fb6758b4b972d17b5d1f502c8
 2024-08-26 12:17:03 +02:00
Ricardo Wurmus a6d670f289 gnu: r-gdsfmt: Update to 1.40.1. 
* gnu/packages/bioconductor.scm (r-gdsfmt): Update to 1.40.1.

Change-Id: Ib9f585e2e2ad6ebc883a626da2138caffc909613
 2024-08-26 12:17:03 +02:00
Ricardo Wurmus 2474e1e1d7 gnu: r-xcms: Update to 4.2.3. 
* gnu/packages/bioconductor.scm (r-xcms): Update to 4.2.3.

Change-Id: I17355573c0af40aa8b021da3e46a99a9709b411b
 2024-08-26 12:17:02 +02:00
Ricardo Wurmus 0c051d6520 gnu: r-clusterprofiler: Update to 4.12.5. 
* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 4.12.5.

Change-Id: I05468212919db2e385cd4bd604891b7deca4110f
 2024-08-26 12:17:02 +02:00
Ricardo Wurmus af299323fc gnu: r-dose: Update to 3.30.4. 
* gnu/packages/bioconductor.scm (r-dose): Update to 3.30.4.
[propagated-inputs]: Remove r-hdo-db and r-yulab-utils.

Change-Id: Ia8ed1de853bd80ad4c482667c1b3547b113410ae
 2024-08-26 12:17:02 +02:00
Ricardo Wurmus bd8e53d39e gnu: r-gosemsim: Update to 2.30.2. 
* gnu/packages/bioconductor.scm (r-gosemsim): Update to 2.30.2.
[propagated-inputs]: Add r-dbi, r-digest, r-httr2, and r-r-utils.

Change-Id: Idb915ec70b79f7464011e94256f68e940d63764f
 2024-08-26 12:17:02 +02:00
Ricardo Wurmus 66904a4109 gnu: r-ensembldb: Update to 2.28.1. 
* gnu/packages/bioconductor.scm (r-ensembldb): Update to 2.28.1.

Change-Id: I8d03eb64092c04e5a05f5371e1d3589a2efcd4f1
 2024-08-26 12:17:02 +02:00
Ricardo Wurmus 018aa1323a gnu: r-dmrcate: Update to 3.0.8. 
* gnu/packages/bioconductor.scm (r-dmrcate): Update to 3.0.8.

Change-Id: I62421e4df317cf33c08bdd4f65221c255d4c2dc7
 2024-08-26 12:17:02 +02:00
King, Spencer 8059adada5 gnu: Add r-shinydisconnect. 
* gnu/packages/cran.scm (r-shinydisconnect): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
Change-Id: Ibf90c8902b6e6e6c45b7bdb921f310f14ac6b803
 2024-08-26 11:39:39 +02:00
Ricardo Wurmus a7db59b3fd committer: Avoid // in xpath. 
When using // we assume that the package definition's S-expression is a
nesting of proper lists.  This is not guaranteed to be true, because a package
definition may contain alists.  By using an explicit path to the field of
interest we avoid recursion through all child nodes, thus avoiding child nodes
that are more likely to contain improper lists.

* etc/committer.scm.in (change-commit-message): Replace // with a path for the
PACKAGE symbol.

Change-Id: Idefaec9f5c3538484432e15a5865a68fc16e7369
 2024-08-26 11:39:38 +02:00
Ricardo Wurmus a2e10e2878 gnu: r-desctools: Update to 0.99.56. 
* gnu/packages/statistics.scm (r-desctools): Update to 0.99.56.

Change-Id: I00956252d699c06408818cced7c0d04e409c61c7
 2024-08-26 11:39:38 +02:00
Ricardo Wurmus 5af4d1537b gnu: r-fdrtool: Update to 1.2.18. 
* gnu/packages/statistics.scm (r-fdrtool): Update to 1.2.18.

Change-Id: I199c8f82b86c1b8cc40f5dffd6c55f1ff4b727e0
 2024-08-26 11:39:38 +02:00
Ricardo Wurmus 304c1f8a93 gnu: r-rcppeigen: Update to 0.3.4.0.2. 
* gnu/packages/statistics.scm (r-rcppeigen): Update to 0.3.4.0.2.

Change-Id: I3f9ddfdeb14da7bd42bd6e46389da2ec11dc9940
 2024-08-26 11:39:38 +02:00
Ricardo Wurmus ef2e52a922 gnu: r-minqa: Update to 1.2.8. 
* gnu/packages/statistics.scm (r-minqa): Update to 1.2.8.

Change-Id: Ibdf083085acf888be22d807ea77f2b4caf28de44
 2024-08-26 11:39:38 +02:00
Ricardo Wurmus 701ef945df gnu: r-robust: Update to 0.7-5. 
* gnu/packages/statistics.scm (r-robust): Update to 0.7-5.

Change-Id: I14ceb59373e95295b2bb90712258571226f76205
 2024-08-26 11:39:38 +02:00
Ricardo Wurmus 803f295249 gnu: r-rrcov: Update to 1.7-6. 
* gnu/packages/statistics.scm (r-rrcov): Update to 1.7-6.

Change-Id: I21b0a480e840999d554dfce503a1e2e9137ea455
 2024-08-26 11:39:38 +02:00
Ricardo Wurmus 5efce1833e gnu: r-pcapp: Update to 2.0-5. 
* gnu/packages/statistics.scm (r-pcapp): Update to 2.0-5.

Change-Id: I4b4ee28b6777e41fc200e8bad748444b7a34f0e8
 2024-08-26 11:39:38 +02:00
Ricardo Wurmus 5faeac1abb gnu: r-robustbase: Update to 0.99-4. 
* gnu/packages/statistics.scm (r-robustbase): Update to 0.99-4.

Change-Id: I98104ac5700de8e50fcd8dcbcf0745845c809a9e
 2024-08-26 11:39:38 +02:00
Ricardo Wurmus 0c41f19ef6 gnu: r-fastica: Update to 1.2-5.1. 
* gnu/packages/statistics.scm (r-fastica): Update to 1.2-5.1.

Change-Id: I379e9cb4f704e4c8187152762d65f034fd42bf5a
 2024-08-26 11:39:38 +02:00
Ricardo Wurmus 4c60a9d5c2 gnu: r-rann: Update to 2.6.2. 
* gnu/packages/statistics.scm (r-rann): Update to 2.6.2.

Change-Id: I4be5c6a4f63f5bd572d8b35637ee68c65c89a428
 2024-08-26 11:39:38 +02:00
Ricardo Wurmus 09a6994e38 gnu: r-sfsmisc: Update to 1.1-19. 
* gnu/packages/statistics.scm (r-sfsmisc): Update to 1.1-19.

Change-Id: Ie8c3682f4b0bf2cc98de7753b0cbed82f6303b48
 2024-08-26 11:39:38 +02:00
Ricardo Wurmus 01e18de27d gnu: r-mvtnorm: Update to 1.2-6. 
* gnu/packages/statistics.scm (r-mvtnorm): Update to 1.2-6.

Change-Id: I49def37b078afadc47aaba571fd6ee6a2399f09c
 2024-08-26 11:39:38 +02:00
Ricardo Wurmus bc99d00db3 gnu: r-rmarkdown: Update to 2.28. 
* gnu/packages/statistics.scm (r-rmarkdown): Update to 2.28.

Change-Id: Id76c14ee9db4e49ecafe5fe0f5e45c0212ad1333
 2024-08-26 11:39:38 +02:00
Ricardo Wurmus 1f312e5275 gnu: r-digest: Update to 0.6.37. 
* gnu/packages/statistics.scm (r-digest): Update to 0.6.37.

Change-Id: I9445786cc703d704c36cf6c56d06cb53f23505cc
 2024-08-26 11:39:38 +02:00
Ricardo Wurmus 0449398eb6 gnu: r-paws-common: Update to 0.7.5. 
* gnu/packages/cran.scm (r-paws-common): Update to 0.7.5.

Change-Id: I074d17393bd5ec5bf4ecd860ac0ab0f08bfada04
 2024-08-26 11:39:38 +02:00
Ricardo Wurmus 3e22e504d2 gnu: r-opencpu: Update to 2.2.13. 
* gnu/packages/cran.scm (r-opencpu): Update to 2.2.13.

Change-Id: Ia783a7a278852a5bc0136f015624b1c0283a3ac3
 2024-08-26 11:39:38 +02:00
Ricardo Wurmus e07bd70350 gnu: r-webutils: Update to 1.2.1. 
* gnu/packages/cran.scm (r-webutils): Update to 1.2.1.

Change-Id: I680a8ecb149289581ef3cf53fab575b5036191b2
 2024-08-26 11:39:38 +02:00
Ricardo Wurmus d8d3141b9b gnu: r-intervals: Update to 0.15.5. 
* gnu/packages/cran.scm (r-intervals): Update to 0.15.5.

Change-Id: I587ce6595d3d06177a05f7c719996a6977e09aed
 2024-08-26 11:39:38 +02:00
Ricardo Wurmus 44dc561376 gnu: r-maldiquant: Update to 1.22.3. 
* gnu/packages/cran.scm (r-maldiquant): Update to 1.22.3.

Change-Id: I4a08996f8df6d0c746636cfbdbe9fcbaf234749d
 2024-08-26 11:39:38 +02:00
Ricardo Wurmus 99897a70e3 gnu: r-qtl: Update to 1.70. 
* gnu/packages/cran.scm (r-qtl): Update to 1.70.

Change-Id: Ic181aaa70c5396e3057ef838a235d36ed19bc31e
 2024-08-26 11:39:38 +02:00
Ricardo Wurmus fddaaba285 gnu: r-hunspell: Update to 3.0.4. 
* gnu/packages/cran.scm (r-hunspell): Update to 3.0.4.

Change-Id: Id818aece69eae53bc83b1a14a881a028bb4b5951
 2024-08-26 11:39:38 +02:00
Ricardo Wurmus 230df70376 gnu: r-flexsurv: Update to 2.3.2. 
* gnu/packages/cran.scm (r-flexsurv): Update to 2.3.2.

Change-Id: Ia38e29f6fbdafa6e0834bc9d46f7a99e0491c65d
 2024-08-26 11:39:38 +02:00
Ricardo Wurmus 1aa52a00ff gnu: r-spatstat-utils: Update to 3.1-0. 
* gnu/packages/cran.scm (r-spatstat-utils): Update to 3.1-0.

Change-Id: I2a363b32aee2fa9fc21af493ce6758144833f8bd
 2024-08-26 11:39:38 +02:00