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Author SHA1 Message Date
Ludovic Courtès
db1d75b9fd gnu: rdma-core: Update to 54.0. 
* gnu/packages/linux.scm (rdma-core): Update to 54.0.

Change-Id: I7f10ec57a1cad585abb08bdc30bd9e2aaafe7624
 2024-12-01 17:48:15 +01:00
Ludovic Courtès
8ba6651d39 gnu: ucx: Update to 1.17.0. 
* gnu/packages/fabric-management.scm (ucx): Update to 1.17.0.
* gnu/packages/patches/ucx-tcp-iface-ioctl.patch: Rebase.

Change-Id: I2089de93da88f4f81c4b233eb03abae1f41dfe7f
 2024-12-01 17:48:11 +01:00
Ludovic Courtès
c25fd8eeb1 Revert "gnu: ucx: Update to 1.17.0." 
This reverts commit 7c36577cde, which
broke unit tests running in the chroot build environment.

For instance, tests of ‘hdf5-parallel-openmpi’ would fail with:

  Testing ../../src/h5diff/ph5diff -c 1_vds.h5 2_vds.h5                 *FAILED*
  ====Expected result (expect_sorted) differs from actual result (actual_sorted)
      *** expect_sorted	2024-12-01 16:41:03.795879595 +0000
      --- actual_sorted	2024-12-01 16:41:03.791879542 +0000
      ***************
      *** 1,3 ****
      --- 1,15 ----
	Not comparable: </vds_dset> has rank 3, dimensions [5x18x8], max dimensions [18446744073709551615x18x8]
	Warning: </vds_dset> or </vds_dset> is a virtual dataset
      + [1733071262.437780] [localhost:33263:0]       tcp_iface.c:893  UCX  ERROR scandir(/sys/class/net) failed: No such file or directory
      + [1733071262.468994] [localhost:33247:0]       tcp_iface.c:893  UCX  ERROR scandir(/sys/class/net) failed: No such file or directory
      + [1733071262.479911] [localhost:33242:0]       tcp_iface.c:893  UCX  ERROR scandir(/sys/class/net) failed: No such file or directory

Change-Id: I9c08d3c5375a2abd7d78344dfbef9b407828d1e0
 2024-12-01 17:46:43 +01:00
Jonathan Brielmaier
4f6e9c7de1 gnu: icedove: Update to 115.16.3. 
* gnu/packages/gnuzilla.scm (icedove): Update to 115.16.3.

Change-Id: I076e670a5442a910ac6d5aeb7ed8f64236442062
 2024-12-01 14:12:33 +01:00
Efraim Flashner
1bcf1a0146 gnu: openmpi-5: Don't force building with ucx. 
* gnu/packages/mpi.scm (openmpi-5)[inputs]: Use inherited inputs to only
add ucx when it is supported.
[arguments]: Only add configure-flag for ucx when it is included as an
input.

Change-Id: I4a5fc86999ffbafdb99bd68c170fc7a1fa6a33a5
 2024-12-01 14:55:08 +02:00
Efraim Flashner
7c36577cde gnu: ucx: Update to 1.17.0. 
* gnu/packages/mpi.scm (ucx): Update to 1.17.0.
[source]: Remove patch.  Add snippet to add missing header.
[supported-systems]: Add riscv64-linux.
* gnu/packages/patches/ucx-tcp-iface-ioctl.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.

Change-Id: I56db18f32ec0baa8439a31a1781763f318e8726e
 2024-12-01 14:55:08 +02:00
Efraim Flashner
0aae7c333d gnu: libfabric: Check for transitive supported packages. 
* gnu/packages/linux.scm (libfabric)[inputs]: Adjust if-supported
function to check the package-transitive-supported-systems.

Change-Id: I47d14b08906753d20f6f2a7ab4068a9e84319350
 2024-12-01 14:55:08 +02:00
Efraim Flashner
2790f7b437 gnu: cassini-headers: Limit supported systems. 
* gnu/packages/linux.scm (cassini-headers)[supported-systems]: New field.

Change-Id: I44efa95de527099774abb57da78410c627fdc968
 2024-12-01 14:55:04 +02:00
Josep Bigorra
d08c219b4a gnu: Add scenefx. 
* gnu/packages/wm.scm (scenefx): New variable.

Signed-off-by: Zheng Junjie <zhengjunjie@iscas.ac.cn>
Change-Id: Ia91747cbec59226a83a020b5fedbfd99886c35df
 2024-12-01 19:04:50 +08:00
Lynn Leichtle
af13915b28 gnu: cataclysm-dda: Update to 0-H. 
* gnu/packages/games.scm (cataclysm-dda): Update to 0.H.

Signed-off-by: Zheng Junjie <zhengjunjie@iscas.ac.cn>
Change-Id: I8f3776b1bbb4ead2d409b2e1a3c4c98537126f12
 2024-12-01 19:04:26 +08:00
Zheng Junjie
ff3c9fd5e3 gnu: plasma-nm: Add missing inputs. 
* gnu/packages/kde-plasma.scm (plasma-nm)[inputs]: Add
mobile-broadband-provider-info.
[arguments]: Stop replace 'check phase.

Change-Id: I82b220694e26b48f190c1c5d6609da39e955cc30
 2024-12-01 18:15:07 +08:00
Sergey Trofimov
e5c1a708f5 gnu: geoclue: Update to 2.7.2. 
* gnu/packages/gnome.scm (geoclue): Update to 2.7.2.
* gnu/packages/patches/geoclue-config.patch: Adjust.

Reviewed-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
 2024-12-01 10:55:53 +01:00
Liliana Marie Prikler
d1dd176af5 gnu: gimp-next: Update to 3.0.0-RC1. 
* gnu/packages/gimp.scm (gimp-next): Update to 3.0.0-RC1.
[inputs]: Add python-pygobject.

Reviewed-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
 2024-12-01 10:55:53 +01:00
Liliana Marie Prikler
70caf73108 gnu: gegl: Update to 0.4.50. 
* gnu/packages/gimp.scm (gegl): Update to 0.4.50.

Reviewed-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
 2024-12-01 10:55:53 +01:00
Liliana Marie Prikler
011dbaedb5 gnu: babl: Update to 0.1.110. 
* gnu/packages/gimp.scm (babl): Update to 0.1.110.

Reviewed-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
 2024-12-01 10:55:52 +01:00
Ricardo Wurmus
c5b16964bb gnu: r-voltron: Add Python inputs. 
* gnu/packages/bioinformatics.scm (r-voltron)[inputs]: Add python,
python-numpy, python-pandas, python-anndata, python-h5py, python-natsort,
python-numcodecs, python-packaging, python-scipy, python-tifffile, and
python-zarr.

Change-Id: Iab137936550b51d6839d9beaa47f6102a8f3c355
 2024-12-01 10:41:35 +01:00
Ricardo Wurmus
c7e412e775 gnu: r-voltron: Update to 0.2.0-1.9f9415c. 
* gnu/packages/bioinformatics.scm (r-voltron): Update to 0.2.0-1.9f9415c.
[inputs]: Remove tbb.
[propagated-inputs]: Remove r-anndata, r-fastdummies, r-fnn, r-ggforce,
r-hdf5r, r-htmltools, r-interp, r-morpho, r-raster, r-s4vectors, r-scales,
r-terra, r-umap, and r-xml; add r-basilisk, r-ids, r-rann, r-rcdt,
r-rcppannoy, r-rcpparmadillo, r-reticulate, r-s4arrays, and r-sp.
[native-inputs]: Add r-testthat.
[description]: Update.

Change-Id: I8051ade560e03f8e3760560ec7b78d9941c00e08
 2024-12-01 10:26:38 +01:00
Ricardo Wurmus
5531485c5d gnu: Add r-rcdt. 
* gnu/packages/cran.scm (r-rcdt): New variable.

Change-Id: I83b00c95f2c3c6f82e9e9cf8f173ba087e1c29e0
 2024-12-01 10:26:38 +01:00
Ricardo Wurmus
f228b01738 gnu: Add r-colorsgen. 
* gnu/packages/cran.scm (r-colorsgen): New variable.

Change-Id: I1acb2b0dd2661a5abdb59451522da6dffa85f470
 2024-12-01 10:26:38 +01:00
Sharlatan Hellseher
5725688923 gnu: imppg: Disable tests on non x86_64 architectures. 
Tests regretion after update to the latest version as seen in CI log
<https://ci.guix.gnu.org/build/6720267/log/raw>.

* gnu/packages/astronomy.scm (imppg) [arguments]<test-flags>: Silent
tests on non x86_64 architectures, report upstream as well.

Change-Id: I875350ac60dc2f6a72eb1216a614d8943d41f9ed
 2024-12-01 08:58:22 +00:00
Zheng Junjie
f4831760a9 gnu: weechat: Switch to git source. 
* gnu/packages/irc.scm (weechat)[source]: Use git-fetch.

Change-Id: I031d494db1b7c273bc87d0bdb21ee51c2c3ae10b
 2024-12-01 16:03:57 +08:00
Zheng Junjie
f9c3a6dd2a gnu: weechat: Improve style. 
* gnu/packages/irc.scm (weechat)[native-inputs]: Remove label.
[arguments]: Use G-expressions.

Change-Id: I08e2f4135760e61acbae915f045fb3838d965b25
 2024-12-01 16:03:57 +08:00
Ashish SHUKLA
0cd8edf926 gnu: weechat: Update to 4.4.4. 
* gnu/packages/irc.scm (weechat): Update to 4.4.4.

Change-Id: I08c120df160c3ff7095f2418fe9f9553df3abe3c
Signed-off-by: Zheng Junjie <zhengjunjie@iscas.ac.cn>
 2024-12-01 16:03:57 +08:00
Zheng Junjie
db2b0d7df0 gnu: lftp: Use G-expressions. 
* gnu/packages/ftp.scm (lftp)[arguments]: Use G-expressions.

Change-Id: I504465e7604d9638442b063753a8cf8abf3616a9
 2024-12-01 16:03:57 +08:00
Ashish SHUKLA
f45aae2287 gnu: lftp: Update to 4.9.3. 
The updated information is sourced from the upstream repository at
GitHub: https://github.com/lavv17/lftp

* gnu/packages/ftp.scm (lftp): Update to 4.9.3.
[source]<origin>: Switch to git upstream.
[native-inputs]: Add autoconf, automake, gettext-minimal, bison, gnulib,
gperf, and libtool.
[arguments]<#:phases>: Add unpack-gnulib phase. Delete existing bootstrap
phase. Add new bootstrap phase to invoke it after patch-source-shebangs.
[home-page]: Update it.

Change-Id: I73771ed7e577da4bc82a8e74550eca83413dc8de
Signed-off-by: Zheng Junjie <zhengjunjie@iscas.ac.cn>
 2024-12-01 16:03:57 +08:00
Nicolas Graves
2dc38e493b gnu: b4: Fix git binary access. 
* gnu/packages/version-control.scm (b4)[arguments]<#:phases>: Fix
phase 'hardcode-git-bin.

Signed-off-by: Zheng Junjie <zhengjunjie@iscas.ac.cn>
 2024-12-01 16:03:57 +08:00
Zheng Junjie
db8a0b480a gnu: wget2: Use G-expressions. 
* gnu/packages/wget.scm (wget2): Use G-expressions.

Change-Id: I8fbb5bab0746c5c98d2513fb31936ba56a8b7049
 2024-12-01 16:03:54 +08:00
Ricardo Wurmus
adfda4a075 gnu: pigx-scrnaseq: Update to 1.1.10. 
* gnu/packages/bioinformatics.scm (pigx-scrnaseq): Update to 1.1.10.
[arguments]: Remove quasiquote.

Change-Id: I6cab358addfb376a878929bfb5041edc00cd336a
 2024-12-01 08:52:51 +01:00
Ricardo Wurmus
b21b8e909d gnu: pigx-bsseq: Update to 0.1.10. 
* gnu/packages/bioinformatics.scm (pigx-bsseq): Update to 0.1.10.
[native-inputs]: Use tzdata-for-tests instead of tzdata.
[arguments]: Remove quasiquote.

Change-Id: I680b08cda788fc03a8bedb87f241116a051798d6
 2024-12-01 08:52:51 +01:00
Artyom V. Poptsov
aa40c94446 gnu: Add go-jqp. 
* gnu/packages/golang-xyz.scm (go-jqp): New variable.

Change-Id: I736e039a456960e0e5864d7d197b2a6a823bbe58
Reviewed-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2024-12-01 10:27:41 +03:00
Artyom V. Poptsov
25a33a64b9 gnu: go-github-com-charmbracelet-bubbletea: Update to 1.2.3. 
* gnu/packages/golang.scm (go-github-com-charmbracelet-bubbletea): Update to 1.2.3.
[propagated-inputs]: Add go-github-com-muesli-ansi,
go-github-com-muesli-cancelreader, go-github-com-charmbracelet-lipgloss,
go-github-com-charmbracelet-x-term, go-github-com-charmbracelet-x-ansi, and
go-golang-org-x-sync.  Sort inputs alphabetically.
[arguments] <phases>: Fix tests that are failing due to newer version of
"go-github-com-charmbracelet-x-ansi" package.

Change-Id: Ifdb3074f342b34c07c0e7ab47341b159d1eea0c2
Reviewed-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2024-12-01 10:27:41 +03:00
Artyom V. Poptsov
6aad5262d6 gnu: gojq: Adjust import and unpack paths. 
* gnu/packages/web.scm (gojq) [arguments]<import-path>: Provide path to
the command source.
<unpack-path>: Set to "github.com/itchyny/gojq".

Change-Id: I6a4d0cbdba385460d7ab43d62fe1897922a7c7e9
Reviewed-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2024-12-01 10:27:41 +03:00
Artyom V. Poptsov
3ba6127415 gnu: go-github-com-itchyny-gojq: Install the library. 
* gnu/packages/web.scm (go-github-com-itchyny-gojq): Install the library
files instead of "gojq" binary.
[arguments]: Remove <unpack-path>, adjust <import-path>.

Change-Id: I72235e0cfeee81b0e7490ebd9d92d0d36ceb1844
Reviewed-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2024-12-01 10:27:40 +03:00
Artyom V. Poptsov
47e941cb80 gnu: Add go-github-com-muesli-ansi. 
* gnu/packages/golang-xyz.scm (go-github-com-muesli-ansi): New variable.

Change-Id: I3dbbd8af04373997fcb3c60872dff14ab1b2b76a
Reviewed-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2024-12-01 10:27:40 +03:00
Artyom V. Poptsov
689d2ac36c gnu: Add go-github-com-charmbracelet-bubbles. 
* gnu/packages/golang-xyz.scm (go-github-com-charmbracelet-bubbles): New variable.

Change-Id: I090db91509590ca9a8cab1a209d00bcc12b524e7
Reviewed-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2024-12-01 10:27:40 +03:00
Artyom V. Poptsov
9874cc5581 gnu: Add go-github-com-charmbracelet-lipgloss. 
* gnu/packages/golang-xyz.scm (go-github-com-charmbracelet-lipgloss): New variable.

Change-Id: I73050c96830025ed63be7567873f8faf7573453d
Reviewed-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2024-12-01 10:27:39 +03:00
Artyom V. Poptsov
6152dc095b gnu: Add go-github-com-charmbracelet-x-term. 
* gnu/packages/golang-xyz.scm (go-github-com-charmbracelet-x-term): New variable.

Change-Id: I854febc3a3010f39051ee6fbd4a159993043d41e
Reviewed-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2024-12-01 10:27:39 +03:00
Artyom V. Poptsov
4fe2cb289f gnu: Add go-github-com-charmbracelet-x-exp-golden. 
* gnu/packages/golang-xyz.scm (go-github-com-charmbracelet-x-exp-golden): New variable.

Change-Id: I7fa815433d9a83e4562bdc769312dd05e0a298da
Reviewed-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2024-12-01 10:27:39 +03:00
Artyom V. Poptsov
222f672ca3 gnu: Add go-github-com-charmbracelet-x-ansi. 
* gnu/packages/golang-xyz.scm (go-github-com-charmbracelet-x-ansi): New variable.

Change-Id: I1451ae9953bc87475413b83bb636a2df14ddc70c
Reviewed-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2024-12-01 10:27:38 +03:00
Artyom V. Poptsov
7c240b9838 gnu: Add go-github-com-sahilm-fuzzy. 
* gnu/packages/golang-xyz.scm (go-github-com-sahilm-fuzzy): New variable.

Change-Id: Iebf4f8c3848e1e08b2860ac69a5a8d816ac260df
Reviewed-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2024-12-01 10:27:38 +03:00
Artyom V. Poptsov
f9f6ca8c54 gnu: Add go-github-com-kylelemons-godebug-pretty. 
* gnu/packages/golang.scm (go-github-com-kylelemons-godebug-pretty): New variable.

Change-Id: Icd7d5fd70cf56d1ca74e9a2cfb929a3344128ba7
Reviewed-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2024-12-01 10:27:37 +03:00
Artyom V. Poptsov
703951b157 gnu: Add go-github-com-makenowjust-heredoc. 
* gnu/packages/golang-xyz.scm (go-github-com-makenowjust-heredoc): New variable.

Change-Id: I686dfd6a798da764b004a53a562ca788e70f8cd5
Reviewed-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2024-12-01 10:27:37 +03:00
Artyom V. Poptsov
215ae40b5d gnu: Add go-github-com-aymanbagabas-go-udiff. 
* gnu/packages/golang-xyz.scm (go-github-com-aymanbagabas-go-udiff): New variable.

Change-Id: Icac934589b041c9b3b5db0114173d25d0c3f4c34
Reviewed-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2024-12-01 10:27:37 +03:00
Artyom V. Poptsov
58344dfb0e gnu: Add go-github-com-atotto-clipboard. 
* gnu/packages/golang-xyz.scm (go-github-com-atotto-clipboard): New variable.

Change-Id: I4a871983f564034045f4b2ba77f2453cfce5cb2b
Reviewed-by: Sharlatan Hellseher <sharlatanus@gmail.com>
 2024-12-01 10:27:36 +03:00
Efraim Flashner
1fb40a5b92 gnu: xrdp: Only build with nasm on necessary platforms. 
* gnu/packages/rdesktop.scm (xrdp)[native-inputs]: Only include nasm on
platforms which need it.

Change-Id: I9f390af3c12752bc0c3696910170bc994b8a5fd6
 2024-12-01 09:09:23 +02:00
Efraim Flashner
9c3feb3773 gnu: xorgxrdp: Only build with nasm on necessary platforms. 
* gnu/packages/rdesktop.scm (xorgxrdp)[native-inputs]: Only include nasm
on platforms which need it.

Change-Id: I00778cf4b53776754525d42e0586076d4f2be61b
 2024-12-01 09:04:21 +02:00
Artyom V. Poptsov
10e99250f4 gnu: go-github-com-arceliar-phony: Move to golang-xyz. 
* gnu/packages/golang.scm (go-github-com-arceliar-phony): Move from here...
* gnu/packages/golang-xyz.scm: ...to here.

Change-Id: Ia50f331f23326fa8ae6e12b410c12d06cb369bf7
 2024-11-30 20:05:31 +03:00
Artyom V. Poptsov
f8cb1c0a13 gnu: go-github-com-arceliar-ironwood: Move to golang-web. 
* gnu/packages/golang.scm (go-github-com-arceliar-ironwood): Move from here...
* gnu/packages/golang-web.scm: ...to here.

Change-Id: I6ae9084a88ffe0b7cb2d21234c246399e3e0f088
 2024-11-30 19:58:40 +03:00
Artyom V. Poptsov
d3b24d3d78 gnu: yggdrasil: Update to 0.5.10. 
* gnu/packages/networking.scm (yggdrasil): Update to 0.5.10.

Change-Id: Icbd55a218e54ea809bf48159aeae44bb64fc588a
 2024-11-30 19:38:23 +03:00
Artyom V. Poptsov
b456e296dc gnu: go-github-com-arceliar-phony: Update to v0.0.0-20220903101357-530938a4b13d. 
* gnu/packages/golang.scm (go-github-com-arceliar-phony): Update to v0.0.0-20220903101357-530938a4b13d.

Change-Id: I440b785cb902e2a851698e249a273d88a4c937a3
 2024-11-30 19:38:23 +03:00