gnu: ant/java8: Rename to ant.

* gnu/packages/java.scm (ant): Rename to...
(ant/java7): ...this.
(ant/java8): Rename to...
(ant): ...this.
(java-qdox-1.12, java-jarjar, java-hamcrest-core, java-hamcrest-parent-pom)
(java-junit, java-org-ow2-parent-pom-1.3, java-asm-bootstrap): Rename
inputs accordingly.
* gnu/packages/axoloti.scm: Rename accordingly.
* gnu/packages/bioinformatics.scm: idem.
* gnu/packages/groovy.scm: idem.
* gnu/packages/java-maths.scm: idem.
* guix/build-system/ant.scm: idem.

Change-Id: I9d79ce8e351862747420fc2a58301b7f61212293

.dir-locals.el

@@ -141,6 +141,7 @@
    (eval . (put 'substitute* 'scheme-indent-function 1))
    (eval . (put 'match-record 'scheme-indent-function 3))
    (eval . (put 'match-record-lambda 'scheme-indent-function 2))
+   (eval . (put 'with-fluids 'scheme-indent-function 2))
 
    ;; TODO: Contribute these to Emacs' scheme-mode.
    (eval . (put 'let-keywords 'scheme-indent-function 3))

.forgejo/pull_request_template.md

@@ -28,7 +28,13 @@ Tick a box by changing it from [ ] to [x].
   - [ ] i586-gnu
 
 - Package **update**
-  - Closure size increase after update (`./pre-inst-env guix size PACKAGE`).
+  - Closure size increase.
+```console
+$ guix size PACKAGE | tail -n1 # before
+total: ...
+$ ./pre-inst-env guix size PACKAGE | tail -n1 # after
+total: ...
+```
   - Build status of direct dependents (`./pre-inst-env guix build -k -P1 PACKAGE ...`):
 ```text
 

.guix-authorizations

@@ -23,6 +23,8 @@
    (name "cbaines"))
   ("3CE4 6455 8A84 FDC6 9DB4  0CFB 090B 1199 3D9A EBB5"
    (name "civodul"))
+  ("838A FE0D 55DC 074E 360F  943A 84B6 9CE6 F3F6 B767"
+   (name "cnx"))
   ("CCB8 1842 F9D7 058E CD67  377A BF5C DF4D F6BF 6682"
    (name "csantosb"))
   ("510A 8628 E2A7 7678 8F8C  709C 4BC0 2592 5FF8 F4D3"

CODEOWNERS

@@ -68,6 +68,7 @@ guix/discovery\.scm                                @guix/core
 guix/docker\.scm                                   @guix/core
 guix/download\.scm                                 @guix/core
 guix/elf\.scm                                      @guix/core
+guix/fossil-download\.scm                          @guix/core
 guix/ftp-client\.scm                               @guix/core
 guix/gexp\.scm                                     @guix/core
 guix/git-authenticate\.scm                         @guix/core
@@ -239,6 +240,7 @@ tests/guix-home\.sh                                @guix/home
 tests/home-import\.scm                             @guix/home
 tests/home-services\.scm                           @guix/home
 
+gnu/packages/fabric-management\.scm                @guix/hpc
 gnu/packages/mpi\.scm                              @guix/hpc
 gnu/packages/oneapi\.scm                           @guix/hpc
 gnu/packages/opencl\.scm                           @guix/hpc
@@ -347,7 +349,6 @@ guix/scripts/import/pypi\.scm                      @guix/python
 tests/import/pypi\.scm                             @guix/python
 tests/toml\.scm                                    @guix/python
 
-gnu/ci\.scm                                        @guix/qa-packages
 gnu/packages/benchmark\.scm                        @guix/qa-packages
 gnu/packages/check\.scm                            @guix/qa-packages
 gnu/packages/ci\.scm                               @guix/qa-packages
@@ -484,6 +485,7 @@ gnu/services/version-control\.scm                  @guix/vcs
 gnu/tests/version-control\.scm                     @guix/vcs
 guix/build/bzr\.scm                                @guix/vcs
 guix/build/cvs\.scm                                @guix/vcs
+guix/build/fossil\.scm                             @guix/vcs
 guix/build/git\.scm                                @guix/vcs
 guix/build/hg\.scm                                 @guix/vcs
 guix/build/svn\.scm                                @guix/vcs

Makefile.am

@@ -104,6 +104,7 @@ MODULES =					\
   guix/discovery.scm				\
   guix/android-repo-download.scm		\
   guix/bzr-download.scm            		\
+  guix/fossil-download.scm			\
   guix/git-download.scm				\
   guix/hg-download.scm				\
   guix/hash.scm					\
@@ -236,6 +237,7 @@ MODULES =					\
   guix/build/asdf-build-system.scm		\
   guix/build/bzr.scm				\
   guix/build/copy-build-system.scm		\
+  guix/build/fossil.scm				\
   guix/build/git.scm				\
   guix/build/hg.scm				\
   guix/build/glib-or-gtk-build-system.scm	\
@@ -802,17 +804,17 @@ EXTRA_DIST +=						\
   etc/manifests/upgrade.scm				\
   scripts/guix.in					\
   tests/cve-sample.json					\
-  tests/keys/civodul.pub				\
+  tests/keys/openpgp/civodul.pub			\
-  tests/keys/dsa.pub					\
+  tests/keys/openpgp/dsa.pub				\
-  tests/keys/ed25519-2.pub				\
+  tests/keys/openpgp/ed25519-2.pub			\
-  tests/keys/ed25519-2.sec				\
+  tests/keys/openpgp/ed25519-2.sec			\
-  tests/keys/ed25519-3.pub				\
+  tests/keys/openpgp/ed25519-3.pub			\
-  tests/keys/ed25519-3.sec				\
+  tests/keys/openpgp/ed25519-3.sec			\
-  tests/keys/ed25519.pub				\
+  tests/keys/openpgp/ed25519.pub			\
-  tests/keys/ed25519.sec				\
+  tests/keys/openpgp/ed25519.sec			\
-  tests/keys/rsa.pub					\
+  tests/keys/openpgp/rsa.pub				\
-  tests/keys/signing-key.pub				\
+  tests/keys/openpgp/signing-key.pub			\
-  tests/keys/signing-key.sec				\
+  tests/keys/openpgp/signing-key.sec			\
   tests/test.drv					\
   $(TESTS)
 

NEWS

@@ -17,6 +17,11 @@ Please send Guix bug reports to bug-guix@gnu.org.
 * Changes in 1.6.0 (since 1.5.0)
 ** Distribution
 *** GNOME updated to version 48
+*** New service for Fossil SCM
+*** TeX Live updated to 2026.1
+
+** Programming interfaces
+*** New (guix fossil-download) module, for fetching Fossil repositories
 
 * Changes in 1.5.0 (since 1.4.0)
 ** Package management

build-aux/test-env.in

@@ -73,8 +73,8 @@ then
 	# Copy the keys so that the secret key has the right permissions (the
 	# daemon errors out when this is not the case.)
 	mkdir -p "$GUIX_CONFIGURATION_DIRECTORY"
-	cp "@abs_top_srcdir@/tests/keys/signing-key.sec"	\
+	cp "@abs_top_srcdir@/tests/keys/openpgp/signing-key.sec"	\
-	   "@abs_top_srcdir@/tests/keys/signing-key.pub"	\
+	   "@abs_top_srcdir@/tests/keys/openpgp/signing-key.pub"	\
 	   "$GUIX_CONFIGURATION_DIRECTORY"
 	chmod 400 "$GUIX_CONFIGURATION_DIRECTORY/signing-key.sec"
     fi

doc/guix.texi

@@ -2658,9 +2658,11 @@ bootloaders.
 
 Once you are done partitioning the target hard disk drive, you have to
 create a file system on the relevant partition(s)@footnote{Currently
-Guix System only supports ext4, btrfs, JFS, F2FS, and XFS file systems.  In
+Guix System supports only ext4, btrfs, bcachefs, JFS, F2FS, and XFS
-particular, code that reads file system UUIDs and labels only works for these
+file systems.  In particular, code that reads file system UUIDs and
-file system types.}.  For the ESP, if you have one and assuming it is
+labels works only for these file system types.  For bcachefs, also add
+the @code{bcachefs-linux-module} to your @code{operating-system}'s
+@code{initrd-modules}.}.  For the ESP, if you have one and assuming it is
 @file{/dev/sda1}, run:
 
 @example
@@ -8735,6 +8737,52 @@ The example below denotes a version of gnu-standards to fetch:
 
 @end deftp
 
+For Fossil repositories, the module @code{(guix fossil-download)} defines
+the @code{fossil-fetch} origin method and @code{fossil-reference} data type
+for support of the Fossil @abbr{SCM, software configuration management} system.
+
+@deffn {Procedure} fossil-fetch ref hash-algo hash [name]
+Return a fixed-output derivation that fetches @var{ref}, a
+@code{<fossil-reference>} object.  The output is expected to have recursive
+hash @var{hash} of type @var{hash-algo} (a symbol).  Use @var{name} as
+the file name, or a generic name if @code{#f}.
+@end deffn
+
+@deftp {Data Type} fossil-reference
+This data type represents a Fossil reference
+for @code{fossil-fetch} to retrieve.
+
+@table @asis
+@item @code{uri} (type: string)
+The URI of a Fossil repository to clone, in one of the following forms,
+in which @code{[...]} denotes optional elements:
+
+@table @code
+@item http[s]://[userid[:password]@@]host[:port][/path]
+A HTTP/HTTPS URL.
+@item [file://]path/to/repo.fossil
+A file URI, where the path must have an extra leading @code{/}
+to use an absolute path (without the URI scheme, the repository
+is opened directly without cloning).
+@end table
+
+@item @code{check-in} (type: string)
+A @url{https://fossil-scm.org/home/doc/trunk/www/checkin_names.wiki,
+name of the check-in} to fetch, e.g.@: its canonical hexadecimal identifier,
+associated tag and/or timestamp.
+@end table
+
+The example below denotes the @code{version-3.51.1} tag
+of the SQLite repository:
+
+@lisp
+(fossil-reference
+ (uri "https://sqlite.org/src")
+ (check-in "version-3.51.1"))
+@end lisp
+
+@end deftp
+
 @node Defining Package Variants
 @section Defining Package Variants
 
@@ -19146,6 +19194,10 @@ swap file is encrypted because the entire device is encrypted.
 @xref{Swap Space}, or @xref{Preparing for Installation,,Disk
 Partitioning}, for an example.
 
+When using GRUB as the bootloader, the LUKS password is only requested
+once: GRUB passes the master key to the initial RAM disk automatically.
+@xref{Bootloader Configuration, Automatic LUKS Master Key Passing}, for
+details.
 
 @end defvar
 
@@ -27015,6 +27067,32 @@ Deprecated option.
 @end deftp
 
 
+@c %end of fragment
+
+@defvar gardenhostd-service-type
+Type for the service that runs gardenhostd, a partial implementation of
+the systemd-hostnamed daemon.  It provides the org.freedesktop.hostname1
+D-Bus interface, which helps applications like gnome-control-center
+retrieve and modify the system’s hostname, as well as set a pretty
+hostname for display.
+
+The value for this service is a @code{<gardenhostd-configuration>} object.
+@end defvar
+
+@c %start of fragment
+
+@deftp {Data Type} gardenhostd-configuration
+Available @code{gardenhostd-configuration} fields are:
+
+@table @asis
+@item @code{gardenhostd} (default: @code{gardenhostd}) (type: package)
+The gardenhostd package to use.
+
+@end table
+
+@end deftp
+
+
 @c %end of fragment
 
 @defvar accountsservice-service-type
@@ -36561,13 +36639,14 @@ in @code{Nginx}.  It is used to generate cat avatar from a seed, for instance
 the hash of a user's email address.
 
 @deffn {Procedure} cat-avatar-generator-service @
-       [#:cache-dir "/var/cache/cat-avatar-generator"] @
+       [#:cache-dir "/var/cache/cat-avatar-generator/"] @
        [#:package cat-avatar-generator] @
        [#:configuration (nginx-server-configuration)]
 Returns an nginx-server-configuration that inherits @code{configuration}.  It
 extends the nginx configuration to add a server block that serves @code{package},
 a version of cat-avatar-generator.  During execution, cat-avatar-generator will
-be able to use @code{cache-dir} as its cache directory.
+be able to use @code{cache-dir} as its cache directory, which must end
+with a slash, be created manually, and be writable by php-fpm.
 @end deffn
 
 A simple setup for cat-avatar-generator can look like this:
@@ -44243,10 +44322,11 @@ behind a reverse proxy and serve repositories from a custom location.
 (service fossil-service-type
          (fossil-configuration
           (repository "/srv/museum")
-          (repo-list? #t)
+          (list-repositories? #t)
           (base-url "https://museum.example")
-          (socket-file "/var/run/fossil.sock")
+          (compress? #f)
-          (compress? #f)))
+          (https? #t)
+          (socket-file "/var/run/fossil.sock")))
 @end lisp
 
 @deftp {Data Type} fossil-configuration
@@ -48392,9 +48472,10 @@ A string denoting the name service (@pxref{Services in the NSS
 configuration,,, libc, The GNU C Library Reference Manual}).
 
 Note that name services listed here must be visible to nscd.  This is
-achieved by passing the @code{#:name-services} argument to
+achieved by providing the list of packages implementing the needed
-@code{nscd-service} the list of packages providing the needed name
+services via the @code{name-services} field of the
-services (@pxref{Base Services, @code{nscd-service}}).
+@code{nscd-configuration} record to be used with the @code{nscd-service-type}
+service (@pxref{Base Services, @code{nscd-configuration}}).
 
 @item reaction
 An action specified using the @code{lookup-specification} macro
@@ -48837,49 +48918,56 @@ This option in enabled by default.  In some cases involving the
 in RAM, it can be handy to disable the option by setting it to
 @code{#f}.
 
+@subsubheading Automatic LUKS Master Key Passing
+
+When booting from a LUKS-encrypted device using GRUB, the password is
+normally requested twice: once by GRUB to access @file{/boot}, and a
+second time by the initial RAM disk to mount the root file system.
+
+When GRUB's @code{cryptomount} command unlocks a LUKS device, GRUB
+retains the volume's master key in memory.  The @code{cryptodisk}
+module exposes these master keys via a GRUB-internal virtual file
+system called @dfn{procfs}, accessible as @code{(proc)/luks_script}.
+Each line of this virtual file has the form:
+
+@example
+luks_mount @var{uuid} @var{offset} @var{sector-size} @var{cipher-mode-iv} @var{hex-master-key}
+@end example
+
+@noindent
+(or @code{luks2_mount} for LUKS2 volumes).
+
+When the store resides on an encrypted device, the generated GRUB
+configuration automatically injects this virtual file into the initial
+RAM disk using GRUB's @code{newc:} initrd prefix---a documented
+mechanism for synthesizing a CPIO archive on the fly
+(@pxref{GNU/Linux,,, grub, GNU GRUB manual}).  The resulting initrd
+line is equivalent to:
+
+@example
+initrd newc:etc/luks_script:(proc)/luks_script @dots{} /boot/initrd
+@end example
+
+@noindent
+The initial RAM disk then reads @file{/etc/luks_script}, looks up the
+matching UUID, and calls @command{cryptsetup open --volume-key-file} to
+unlock the device without prompting for a password a second time.  If
+the master key is missing or does not match, the system falls back to
+an interactive password prompt, so this mechanism is transparent to the
+user.
+
+No configuration is required: GRUB's @code{procfs} and @code{luks}
+modules are loaded automatically when encrypted devices are declared
+via @code{luks-device-mapping} (@pxref{Mapped Devices}).
+
 @item @code{extra-initrd} (default: @code{#f})
 File name of an additional initrd to load during the boot.  It may or
 may not point to a file in the store, but the main use case is for
 out-of-store files containing secrets.
 
-In order to be able to provide decryption keys for LUKS devices, they
-need to be available in the initial RAM disk.  However they cannot be
-stored inside the usual initrd, since it is stored in the store and
-being world-readable (as files in the store are) is not a desired
-property for an initrd containing decryption keys.  You can therefore
-use this field to instruct GRUB to also load a manually created initrd
-not stored in the store.
-
 For any use case not involving secrets, you should use regular initrd
 (@pxref{operating-system Reference, @code{initrd}}) instead.
 
-Suitable image can be created for example like this:
-
-@example
-echo /key-file.bin | cpio -oH newc >/key-file.cpio
-chmod 0000 /key-file.cpio
-@end example
-
-After it is created, you can use it in this manner:
-
-@lisp
-;; Operating system with encrypted boot partition
-(operating-system
-  @dots{}
-  (bootloader (bootloader-configuration
-               (bootloader grub-efi-bootloader)
-               (targets '("/boot/efi"))
-               ;; Load the initrd with a key file...
-               (extra-initrd "/key-file.cpio")))
-  (mapped-devices
-   (list (mapped-device
-          (source (uuid "12345678-1234-1234-1234-123456789abc"))
-          (target "my-root")
-          (type luks-device-mapping)
-          ;; ... and use it to unlock the root device.
-          (arguments '(#:key-file "/key-file.bin"))))))
-@end lisp
-
 Be careful when using this option, since pointing to a file that is not
 readable by the grub while booting will cause the boot to fail and
 require a manual edit of the initrd line in the grub menu.
@@ -51621,6 +51709,63 @@ phone-number = 0
 is-married = true
 @end example
 
+@subsubsection Serializing to environment variables
+@cindex environment variables, serialization of configuration records
+
+There are services which expect their configuration as environment variables.
+The @code{(gnu services configuration environment-variables)} module provides
+facilities to serialize configuration records from
+@code{(gnu services configuration)} to list of pairs representing environment
+variables.
+
+For example this configuration record:
+
+@lisp
+(define-configuration/no-serialization server
+  (ssh-port
+   (number 22)
+   "The public SSH port of the server.")
+  (fqdn
+   (maybe-string)
+   "The fully qualified domain name of the server.")
+  (active?
+   (boolean #f)
+   "Whether or not the server should be activated."))
+
+(define my-server
+ (server
+  (ssh-port 20022)
+  (active? #t)))
+@end lisp
+
+with this call:
+
+@lisp
+(serialize-environment-variables my-server server-fields
+                                 #:true-value "1"
+                                 #:false-value "0")
+@end lisp
+
+would yield:
+
+@lisp
+'(("SSH_PORT" . "20022")
+  ("ACTIVE" . "1"))
+@end lisp
+
+@anchor{serialize-environment-variables-procedure}
+@deffn {Procedure} serialize-environment-variables @var{config} @var{fields} @
+         [@var{selection} #f] [@var{negate?} #f] [#:prefix #f] @
+         [#:true-value "true"] [#:false-value "false"]
+Serializes the fields whose name is included in SELECTION from CONFIG, a
+configuration from @code{(gnu services configuration)}, and FIELDS, the
+list of its field records, to a list of pairs.  When NEGATE? is #t all services
+not included in SELECTION will be serialized.  Each  pair represents an
+environment variable.  The first element of each pair is the variable name, the
+second is the value.  When PREFIX is a string it is prepended to the variable
+name.  TRUE-VALUE and FALSE-VALUE will be used as a representation for
+respectfully @code{#t} and @code{#f}.
+@end deffn
 
 @c *********************************************************************
 @cindex troubleshooting, Guix System
@@ -53363,6 +53508,9 @@ Maximum time a cache entry for SSH keys is valid, in seconds.
 @item @code{extra-content} (default: @code{""}) (type: raw-configuration-string)
 Raw content to add to the end of @file{~/.gnupg/gpg-agent.conf}.
 
+@item @code{shepherd-requirement} (default: @code{'()}) (type: list-of-symbols)
+List of services that should be started before this service.
+
 @end table
 
 @end deftp

etc/news.scm

@@ -46,7 +46,8 @@
  (entry (commit "a7c8e68dc51144a6d3981b770aca9c4897fc7c0c")
         (title
          (en "Records can refer to inherited values of thunked fields")
-         (de "Vererbung in Verbundsobjekten erlaubt Verweise auf geerbte Werte verzögert ausgewerteter Felder"))
+         (de "Vererbung in Verbundsobjekten erlaubt Verweise auf geerbte Werte verzögert ausgewerteter Felder")
+         (pt "Registros podem referir-se a valores herdados de campos ainda não evaluados (thunks)"))
         (body
          (en "A new feature has been added to records—the facility used when
 defining packages, services, operating systems, and many other things—that,
@@ -114,7 +115,42 @@ Verbundstypen aus, die mit @code{define-record-type*} erstellt wurden:
 und so weiter.
 
 Hinweis: das ist eine inkompatible Änderung. Die neu eingeführte Bindung –
-@code{inputs} im obigen Beispiel – kann gleichnamige Bindungen überschatten.")))
+@code{inputs} im obigen Beispiel – kann gleichnamige Bindungen überschatten.")
+         (pt "Um novo recurso foi adicionado aos registros - a ferramenta
+usada quando se definem pacotes, serviços, sistemas operacionais, e muitas
+outras coisas - que, quando herdados de outro registro, te permitem referir
+aos valores de campos herdados.  Durante a definição de variantes de pacotes,
+você pode encontrar este padrão:
+
+@lisp
+(package
+  (inherit gdb)
+  (inputs (modify-inputs (package-inputs gdb)
+            (delete \"guile\"))))
+@end lisp
+
+Agora isto pode ser escrito desta forma:
+
+@lisp
+(package
+  (inherit gdb)
+  (inputs (modify-inputs inputs ;<- Note a modificação
+            (delete \"guile\"))))
+@end lisp
+
+Dentro do corpo de @code{inputs}, o identificador @code{inputs} agora está
+atrelado ao @dfn{valor herdado} - id est, ap valor que este campo herda de
+@code{gdb}.  O mesmo mecanismo pode ser empregado ao modificar outros campos
+da entrada ou ao campo @code{arguments}.  É menos verboso mas também
+@uref{https://issues.guix.gnu.org/50335, é mais preciso}.
+
+Esta mudança se aplica aos campos \"thunk-ados\" de todos os tipos de registro
+produzidos por @code{define-record-type*}: @code{package}, @code{origin},
+@code{operating-system}, @code{home-environment}, e assim por diante.
+
+Note que esta é uma modificação incompatível: as ligações introduzidas
+recentemente - @code{inputs} no exemplo acima - podem sombrear ligações de
+mesmo nome.")))
 
  (entry (commit "b52ce9041ad58aeababd2d50d3e72bc23dffff60")
         (title

etc/teams.scm

@@ -565,6 +565,7 @@ challenges"))
               "guix/docker.scm"
               "guix/download.scm"
               "guix/elf.scm"
+              "guix/fossil-download.scm"
               "guix/ftp-client.scm"
               "guix/gexp.scm"
               "guix/git-authenticate.scm"
@@ -786,7 +787,8 @@ the haskell-build-system."
   (team 'hpc
         #:name "High-performance computing team"
         #:description "High-performance computing (HPC) related packages."
-        #:scope (list "gnu/packages/mpi.scm"
+        #:scope (list "gnu/packages/fabric-management.scm"
+                      "gnu/packages/mpi.scm"
                       "gnu/packages/oneapi.scm"
                       "gnu/packages/opencl.scm"
                       "gnu/packages/parallel.scm"
@@ -991,8 +993,7 @@ perl-build-system as well as the rakudo-build-system."
         #:description
         "Quality assurance software (CI/CD, testing, analysis;
 no direct relation to Guix's QA)."
-        #:scope (list "gnu/ci.scm"
+        #:scope (list "gnu/packages/benchmark.scm"
-                      "gnu/packages/benchmark.scm"
                       "gnu/packages/check.scm"
                       "gnu/packages/ci.scm"
                       "gnu/packages/code.scm"
@@ -1214,6 +1215,7 @@ the \"texlive\" importer."
                       "gnu/tests/version-control.scm"
                       "guix/build/bzr.scm"
                       "guix/build/cvs.scm"
+                      "guix/build/fossil.scm"
                       "guix/build/git.scm"
                       "guix/build/hg.scm"
                       "guix/build/svn.scm")))

etc/teams/hpc/mpi-manifest.scm

@@ -0,0 +1,44 @@
+;;; GNU Guix --- Functional package management for GNU
+;;; Copyright © 2026 Ludovic Courtès <ludo@gnu.org>
+;;;
+;;; This file is part of GNU Guix.
+;;;
+;;; GNU Guix is free software; you can redistribute it and/or modify it
+;;; under the terms of the GNU General Public License as published by
+;;; the Free Software Foundation; either version 3 of the License, or (at
+;;; your option) any later version.
+;;;
+;;; GNU Guix is distributed in the hope that it will be useful, but
+;;; WITHOUT ANY WARRANTY; without even the implied warranty of
+;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+;;; GNU General Public License for more details.
+;;;
+;;; You should have received a copy of the GNU General Public License
+;;; along with GNU Guix.  If not, see <http://www.gnu.org/licenses/>.
+
+;; This manifest lists all MPI-related packages: useful for 'guix refresh',
+;; 'guix build', etc.
+
+(use-modules (guix)
+             (gnu packages fabric-management)
+             (gnu packages linux)
+             (gnu packages mpi)
+             (gnu packages parallel))
+
+;; The packages below are what constitutes the MPI stack: helper libraries,
+;; interconnect drivers, and MPI implementations.
+(packages->manifest
+ (list cassini-headers
+       cxi-driver
+       hwloc
+       libcxi
+       libfabric
+       mpich
+       openmpi-5
+       openpmix
+       opensm
+       prrte
+       psm
+       psm2
+       rdma-core
+       ucx))

etc/teams/tex/tex-manifest.scm

@@ -26,7 +26,6 @@
 
 (define %sundry-texlive-packages
   (list bibtool
-        dvisvgm
         rubber
         texmaker
         texstudio

gnu/bootloader/grub.scm

@@ -404,7 +404,10 @@ when booting a root file system on a Btrfs subvolume."
               (initrd (normalize-file (menu-entry-initrd entry)
                                       device-mount-point
                                       store-directory-prefix))
-              (extra-initrd (bootloader-configuration-extra-initrd config)))
+              (extra-initrd (bootloader-configuration-extra-initrd config))
+              (luks-script-initrd
+               (and (pair? store-crypto-devices)
+                    "newc:etc/luks_script:(proc)/luks_script")))
           ;; Here DEVICE is the store and DEVICE-MOUNT-POINT is its mount point.
           ;; Use the right file names for LINUX and INITRD in case
           ;; DEVICE-MOUNT-POINT is not "/", meaning that the store is on a
@@ -412,14 +415,20 @@ when booting a root file system on a Btrfs subvolume."
 
           ;; When STORE-DIRECTORY-PREFIX is defined, prepend it the linux and
           ;; initrd paths, to allow booting from a Btrfs subvolume.
+
+          ;; When the store is on an encrypted device, inject GRUB's
+          ;; (proc)/luks_script into the initrd as /etc/luks_script so the
+          ;; initrd can use the already-decrypted master key to open LUKS
+          ;; volumes without prompting for the password a second time.
           #~(format port "menuentry ~s {
   ~a
   linux ~a ~a
-  initrd ~a ~a
+  initrd ~a ~a ~a
 }~%"
                     #$label
                     #$(grub-root-search device linux)
                     #$linux (string-join (list #$@arguments))
+                    (or #$luks-script-initrd "")
                     (or #$extra-initrd "")
                     #$initrd)))
        (multiboot-kernel
@@ -464,7 +473,7 @@ menuentry ~s {
           ;; Other type of devices aren't implemented.
           #~()))
     (let ((devices (map crypto-device->cryptomount store-crypto-devices))
-          (modules #~(format port "insmod luks~%insmod luks2~%")))
+          (modules #~(format port "insmod procfs~%insmod luks~%insmod luks2~%")))
       (if (null? devices)
           devices
           (cons modules devices))))

gnu/build/file-systems.scm

@@ -1,5 +1,5 @@
 ;;; GNU Guix --- Functional package management for GNU
-;;; Copyright © 2014-2018, 2020-2022 Ludovic Courtès <ludo@gnu.org>
+;;; Copyright © 2014-2018, 2020-2022, 2026 Ludovic Courtès <ludo@gnu.org>
 ;;; Copyright © 2016, 2017 David Craven <david@craven.ch>
 ;;; Copyright © 2017 Mathieu Othacehe <m.othacehe@gmail.com>
 ;;; Copyright © 2019 Guillaume Le Vaillant <glv@posteo.net>
@@ -1455,9 +1455,14 @@ corresponds to the symbols listed in FLAGS."
                (raise c)))
             ((system-error? c)
              (format (current-error-port)
-                     "could not mount partition ~a: ~a~%"
+                     "could not mount partition '~a': ~a~%"
                      (file-system-device fs)
-                     (exception-message c))
+                     (string-trim-both
+                      (call-with-output-string
+                        (lambda (port)
+                          (print-exception port #f
+                                           (exception-kind c)
+                                           (exception-args c))))))
              (unless (file-system-mount-may-fail? fs)
                (raise c))))
       (let* ((type    (file-system-type fs))

gnu/home/services/gnupg.scm

@@ -81,7 +81,10 @@ entry will be expired even if it has been accessed recently.")
    "Maximum time a cache entry for SSH keys is valid, in seconds.")
   (extra-content
    (raw-configuration-string "")
-   "Raw content to add to the end of @file{~/.gnupg/gpg-agent.conf}."))
+   "Raw content to add to the end of @file{~/.gnupg/gpg-agent.conf}.")
+  (shepherd-requirement
+   (list-of-symbols '())
+   "List of services that should be started before this service."))
 
 (define (home-gpg-agent-configuration-file config)
   "Return the @file{gpg-agent.conf} file for @var{config}."
@@ -104,7 +107,7 @@ entry will be expired even if it has been accessed recently.")
 (define (home-gpg-agent-shepherd-services config)
   "Return the possibly-empty list of Shepherd services for @var{config}."
   (match-record config <home-gpg-agent-configuration>
-    (gnupg ssh-support?)
+    (gnupg ssh-support? shepherd-requirement)
     ;; 'gpg-agent' is started on demand by GnuPG's programs, but it has to be
     ;; started explicitly when OpenSSH support is enabled (info "(gnupg) Agent
     ;; Options").
@@ -119,15 +122,21 @@ entry will be expired even if it has been accessed recently.")
                              #:socket-directory-permissions #o700))))
           (list (shepherd-service
                  (provision '(gpg-agent ssh-agent))
+                 (requirement shepherd-requirement)
                  (modules '((shepherd support)))  ;for '%user-runtime-dir'
-                 (start #~(make-systemd-constructor
+                 (start
-                           (list #$(file-append gnupg "/bin/gpg-agent")
+                  #~(lambda args
-                                 "--supervised" "--enable-ssh-support")
+                      ((make-systemd-constructor
-                           (list #$(endpoint "ssh" "S.gpg-agent.ssh")
+                        (list #$(file-append gnupg "/bin/gpg-agent")
-                                 #$(endpoint "browser" "S.gpg-agent.browser")
+                              "--supervised" "--enable-ssh-support")
-                                 #$(endpoint "extra" "S.gpg-agent.extra")
+                        (list #$(endpoint "ssh" "S.gpg-agent.ssh")
-                                 ;; #$(endpoint "scdaemon" "S.scdaemon")
+                              #$(endpoint "browser" "S.gpg-agent.browser")
-                                 #$(endpoint "std" "S.gpg-agent"))))
+                              #$(endpoint "extra" "S.gpg-agent.extra")
+                              ;; #$(endpoint "scdaemon" "S.scdaemon")
+                              #$(endpoint "std" "S.gpg-agent"))
+                        ;; Inherit graphical session environment.
+                        #:environment-variables (environ))
+                       args)))
                  (stop #~(make-systemd-destructor))
                  (documentation "Start 'gpg-agent', the GnuPG passphrase
 agent, with support for handling OpenSSH material."))))

gnu/home/services/niri.scm

@@ -19,6 +19,7 @@
 (define-module (gnu home services niri)
   #:use-module (gnu home services)
   #:use-module (gnu home services shepherd)
+  #:use-module (gnu home services desktop)
   #:use-module (gnu packages bash)
   #:use-module (gnu packages freedesktop)
   #:use-module (gnu packages glib)
@@ -40,14 +41,15 @@
 
 (define (home-niri-shepherd-service config)
   "Return a shepherd service that runs Niri, a scrollable tiling Wayland
-compositor.  The service starts Niri in a DBus session with appropriate
+compositor.  The service starts Niri with appropriate environment variables
-environment variables set for a Wayland desktop session."
+set for a Wayland desktop session."
   (list (shepherd-service
           (documentation "Run Niri scrollable tiling Wayland compositor.")
           (provision '(niri))
+          (requirement '(dbus))
           (start #~(make-forkexec-constructor
                     (list #$(file-append bash "/bin/bash") "-l"
-                          "-c" "exec dbus-run-session niri --session")
+                          "-c" "exec niri --session")
                     #:environment-variables
                     (append (list #$@(niri-configuration-environment-variables config))
                             '("DESKTOP_SESSION=niri"
@@ -66,6 +68,8 @@ environment variables set for a Wayland desktop session."
    (extensions
     (list (service-extension home-shepherd-service-type
                              home-niri-shepherd-service)
+          (service-extension home-dbus-service-type
+                             (const '()))
           (service-extension home-profile-service-type
                              (lambda (config)
                                (list dbus

gnu/local.mk

@@ -56,6 +56,7 @@
 # Copyright © 2022 Alex Griffin <a@ajgrf.com>
 # Copyright © 2022 ( <paren@disroot.org>
 # Copyright © 2022, 2026 jgart <jgart@dismail.de>
+# Copyright © 2022-2023, 2025-2026 Denis 'GNUtoo' Carikli <GNUtoo@cyberdimension.org>
 # Copyright © 2023-2025 Zheng Junjie <z572@z572.online>
 # Copyright © 2023 Ivana Drazovic <iv.dra@hotmail.com>
 # Copyright © 2023 Andy Tai <atai@atai.org>
@@ -216,6 +217,7 @@ GNU_SYSTEM_MODULES =				\
   %D%/packages/convmv.scm			\
   %D%/packages/codex.scm				\
   %D%/packages/coq.scm				\
+  %D%/packages/coreboot.scm			\
   %D%/packages/cpio.scm				\
   %D%/packages/cpp.scm 				\
   %D%/packages/cppi.scm				\
@@ -423,6 +425,7 @@ GNU_SYSTEM_MODULES =				\
   %D%/packages/kde-utils.scm			\
   %D%/packages/kerberos.scm			\
   %D%/packages/kodi.scm				\
+  %D%/packages/kubernetes.scm	        	\
   %D%/packages/language.scm			\
   %D%/packages/lc0.scm			\
   %D%/packages/lean.scm				\
@@ -737,6 +740,8 @@ GNU_SYSTEM_MODULES =				\
   %D%/services/cgit.scm			\
   %D%/services/ci.scm				\
   %D%/services/configuration.scm		\
+  %D%/services/configuration/environment-variables.scm		\
+  %D%/services/configuration/utils.scm		\
   %D%/services/containers.scm   		\
   %D%/services/cuirass.scm			\
   %D%/services/cups.scm				\
@@ -1034,6 +1039,7 @@ dist_patch_DATA =						\
   %D%/packages/patches/azr3.patch				\
   %D%/packages/patches/azr3-remove-lash.patch			\
   %D%/packages/patches/barony-fix-textures.patch		\
+  %D%/packages/patches/bam-python3-compat.patch		\
   %D%/packages/patches/bash-completion-directories.patch	\
   %D%/packages/patches/bash-linux-pgrp-pipe.patch		\
   %D%/packages/patches/basis-universal-unbundle-libs.patch	\
@@ -1169,6 +1175,7 @@ dist_patch_DATA =						\
   %D%/packages/patches/curlftpfs-fix-memory-leak.patch		\
   %D%/packages/patches/curlftpfs-fix-no_verify_hostname.patch	\
   %D%/packages/patches/cursynth-wave-rand.patch			\
+  %D%/packages/patches/cvc5-reproducible-build.patch		\
   %D%/packages/patches/cvs-CVE-2017-12836.patch		\
   %D%/packages/patches/cyrus-sasl-fix-time-h.patch              \
   %D%/packages/patches/d-feet-drop-unused-meson-argument.patch	\
@@ -1650,7 +1657,6 @@ dist_patch_DATA =						\
   %D%/packages/patches/inkscape-libxml2.patch		\
   %D%/packages/patches/instead-use-games-path.patch		\
   %D%/packages/patches/intltool-perl-compatibility.patch	\
-  %D%/packages/patches/inetutils-hurd64.patch			\
   %D%/packages/patches/insight-toolkit-fix-build.patch			\
   %D%/packages/patches/irrlicht-use-system-libs.patch		\
   %D%/packages/patches/irrlicht-link-against-needed-libs.patch	\
@@ -1682,7 +1688,6 @@ dist_patch_DATA =						\
   %D%/packages/patches/jfsutils-gcc-compat.patch		\
   %D%/packages/patches/jfsutils-include-systypes.patch		\
   %D%/packages/patches/john-the-ripper-jumbo-with-gcc-11.patch	\
-  %D%/packages/patches/json-c-0.12-CVE-2020-12762.patch		\
   %D%/packages/patches/json-c-0.13-CVE-2020-12762.patch		\
   %D%/packages/patches/jsonnet-include-cstdint-for-gcc-13-builds.patch	\
   %D%/packages/patches/julia-SOURCE_DATE_EPOCH-mtime.patch	\
@@ -1693,6 +1698,7 @@ dist_patch_DATA =						\
   %D%/packages/patches/libcss-check-format.patch		\
   %D%/packages/patches/libeb-gcc-14.patch			\
   %D%/packages/patches/libextractor-tidy-support.patch		\
+  %D%/packages/patches/libfossil-skip-amalgamation.patch	\
   %D%/packages/patches/libftdi-fix-paths-when-FTDIPP-set.patch	\
   %D%/packages/patches/libgeotiff-fix-tests-with-proj-9.1.1.patch	\
   %D%/packages/patches/libgeotiff-fix-tests-with-proj-9.3.0.patch	\
@@ -1739,7 +1745,7 @@ dist_patch_DATA =						\
   %D%/packages/patches/kissfft-tflite-micro.patch               \
   %D%/packages/patches/kitty-fix-wayland-protocols.patch	\
   %D%/packages/patches/kmod-module-directory.patch		\
-  %D%/packages/patches/kmscon-runtime-keymap-switch.patch	\
+  %D%/packages/patches/kmscon-8-runtime-keymap-switch.patch	\
   %D%/packages/patches/knot-remove-runtime-deps.patch		\
   %D%/packages/patches/kobodeluxe-paths.patch			\
   %D%/packages/patches/kobodeluxe-enemies-pipe-decl.patch	\
@@ -1754,6 +1760,7 @@ dist_patch_DATA =						\
   %D%/packages/patches/kwin-unwrap-executable-name-for-dot-desktop-search.patch\
   %D%/packages/patches/laby-make-install.patch			\
   %D%/packages/patches/laby-use-tmpdir-from-runtime.patch	\
+  %D%/packages/patches/ldc-i686-int128-alignment.patch 		\
   %D%/packages/patches/ldns-drill-examples.patch		\
   %D%/packages/patches/leela-zero-gtest.patch			\
   %D%/packages/patches/less-hurd-path-max.patch			\
@@ -1807,7 +1814,6 @@ dist_patch_DATA =						\
   %D%/packages/patches/libqalculate-3.8.0-libcurl-ssl-fix.patch	\
   %D%/packages/patches/libquicktime-ffmpeg.patch 		\
   %D%/packages/patches/libsepol-versioned-docbook.patch		\
-  %D%/packages/patches/libskk-fix-invalid-escape.patch		\
   %D%/packages/patches/libsoup-auth-digest-fix-crash.patch      \
   %D%/packages/patches/libsoup-deadlock-in-add_listener_in_thread.patch \
   %D%/packages/patches/libsoup-fix-merge-of-ranges.patch        \
@@ -1975,8 +1981,10 @@ dist_patch_DATA =						\
   %D%/packages/patches/netsurf-y2038-tests.patch		\
   %D%/packages/patches/netsurf-longer-test-timeout.patch	\
   %D%/packages/patches/nhc98-c-update.patch			\
+  %D%/packages/patches/nheko-0-12-1-fix-rendering-replies.patch	\
   %D%/packages/patches/nix-dont-build-html-doc.diff		\
   %D%/packages/patches/nfs4-acl-tools-0.3.7-fixpaths.patch	\
+  %D%/packages/patches/neovim-tree-sitter-grammar-path.patch	\
   %D%/packages/patches/network-manager-plugin-ownership.patch	\
   %D%/packages/patches/network-manager-plugin-path.patch	\
   %D%/packages/patches/newlib-getentropy.patch			\
@@ -2107,6 +2115,7 @@ dist_patch_DATA =						\
   %D%/packages/patches/python-random2-getrandbits-test.patch		\
   %D%/packages/patches/python-pillow-use-zlib-1.3.patch	\
   %D%/packages/patches/python-pydocstyle-add-support-for-pep701.patch	\
+  %D%/packages/patches/python-pynvim-fix-test-command-error.patch	\
   %D%/packages/patches/python-pypytools-python-3-fixes.patch	\
   %D%/packages/patches/python-pyreadstat-link-libiconv.patch	\
   %D%/packages/patches/python-sip-include-dirs.patch	\
@@ -2249,6 +2258,7 @@ dist_patch_DATA =						\
   %D%/packages/patches/python-werkzeug-tests.patch		\
   %D%/packages/patches/qdigidoc-bundle-config-files.patch       \
   %D%/packages/patches/qdigidoc-bundle-tsl-files.patch          \
+  %D%/packages/patches/qdigidoc-fix-icon.patch                  \
   %D%/packages/patches/qemu-build-info-manual.patch		\
   %D%/packages/patches/qemu-fix-agent-paths.patch 		\
   %D%/packages/patches/qemu-fix-test-virtio-version.patch       \
@@ -2333,7 +2343,6 @@ dist_patch_DATA =						\
   %D%/packages/patches/rapidcheck-fix-libs.patch		\
   %D%/packages/patches/ratpoison-shell.patch			\
   %D%/packages/patches/retroarch-unbundle-spirv-cross.patch	\
-  %D%/packages/patches/rct-add-missing-headers.patch		\
   %D%/packages/patches/readline-link-ncurses.patch		\
   %D%/packages/patches/renpy-python-3.11-compat.patch			\
   %D%/packages/patches/renpy-fix-integer-slots.patch			\
@@ -2343,7 +2352,6 @@ dist_patch_DATA =						\
   %D%/packages/patches/r-sapa-lapack.patch			\
   %D%/packages/patches/ripperx-missing-file.patch		\
   %D%/packages/patches/rpcbind-CVE-2017-8779.patch		\
-  %D%/packages/patches/rtags-separate-rct.patch			\
   %D%/packages/patches/rtosc-0.3.1-fix-invalid-comparison-operator.patch	\
   %D%/packages/patches/racket-chez-scheme-bin-sh.patch		\
   %D%/packages/patches/racket-launcher-config-dir.patch		\
@@ -2376,12 +2384,12 @@ dist_patch_DATA =						\
   %D%/packages/patches/ruby-flores-fix-deprecations.patch	\
   %D%/packages/patches/ruby-latex-decode-fix-test.patch		\
   %D%/packages/patches/ruby-mustache-1.1.1-fix-race-condition-tests.patch \
-  %D%/packages/patches/ruby-pg-fix-connect-timeout.patch	\
   %D%/packages/patches/ruby-x25519-automatic-fallback-non-x86_64.patch \
   %D%/packages/patches/rust-1.64-fix-riscv64-bootstrap.patch	\
   %D%/packages/patches/rust-1.70-fix-rustix-build.patch	\
   %D%/packages/patches/rust-1.78-unwinding-fix.patch		\
   %D%/packages/patches/rust-1.81-fix-riscv64-bootstrap.patch	\
+  %D%/packages/patches/rust-candle-0.9.1-add-candle-onnx-to-workspace.patch	\
   %D%/packages/patches/rust-codex-0.98.0-core-remove-self-dep.patch	\
   %D%/packages/patches/rust-codex-0.98.0-test-shebangs.patch	\
   %D%/packages/patches/rust-codex-0.98.0-test-timeout.patch	\
@@ -2467,6 +2475,7 @@ dist_patch_DATA =						\
   %D%/packages/patches/t4k-common-libpng16.patch		\
   %D%/packages/patches/tao-add-missing-headers.patch		\
   %D%/packages/patches/tao-fix-parser-types.patch		\
+  %D%/packages/patches/tao-synth-include-string-you-use.patch		\
   %D%/packages/patches/tar-remove-wholesparse-check.patch	\
   %D%/packages/patches/tar-skip-unreliable-tests.patch		\
   %D%/packages/patches/taskwarrior-link-taskchampion-cpp-with-sqlite3.patch \
@@ -2515,10 +2524,11 @@ dist_patch_DATA =						\
   %D%/packages/patches/ultrastar-deluxe-no-freesans.patch		\
   %D%/packages/patches/unity-test-set-subdir-correctly.patch		\
   %D%/packages/patches/unity-test-support-int64.patch		\
+  %D%/packages/patches/ungoogled-chromium-custom-compiler.patch 	\
+  %D%/packages/patches/ungoogled-chromium-empty-parsed-rustc-args.patch	\
   %D%/packages/patches/ungoogled-chromium-extension-search-path.patch	\
   %D%/packages/patches/ungoogled-chromium-RUNPATH.patch		\
   %D%/packages/patches/ungoogled-chromium-system-nspr.patch	\
-  %D%/packages/patches/ungoogled-chromium-unbundle-icu-target.patch     \
   %D%/packages/patches/unknown-horizons-python-3.8-distro.patch	\
   %D%/packages/patches/unknown-horizons-python-3.9.patch	\
   %D%/packages/patches/unknown-horizons-python-3.10.patch	\
@@ -2619,6 +2629,17 @@ dist_patch_DATA =						\
   %D%/packages/patches/yggdrasil-extra-config.patch	\
   %D%/packages/patches/ypsilon-Use-GNU-toolchain-as-default.patch	\
   %D%/packages/patches/zabbix-agent2-test-timezone-fix.patch	\
+  %D%/packages/patches/zed-0.225.10-add-message-notification-action.patch \
+  %D%/packages/patches/zed-0.225.10-add-guix-container-support.patch	\
+  %D%/packages/patches/zed-0.225.10-collapse-multiline-git-deps.patch	\
+  %D%/packages/patches/zed-0.225.10-exclude-libwebrtc-from-audio.patch		\
+  %D%/packages/patches/zed-0.225.10-disable-dlopen.patch	\
+  %D%/packages/patches/zed-0.225.10-fix-sqlite-memory-mode.patch	\
+  %D%/packages/patches/zed-0.225.10-fix-test-db-isolation.patch	\
+  %D%/packages/patches/zed-0.225.10-fix-workspace-race.patch	\
+  %D%/packages/patches/zed-0.225.10-keep-regular-file-workspaces.patch	\
+  %D%/packages/patches/zed-0.225.10-remove-patch-crates-io.patch	\
+  %D%/packages/patches/zed-0.225.10-use-mock-livekit-on-linux.patch	\
   %D%/packages/patches/zig-0.9-build-respect-PKG_CONFIG-env-var.patch	\
   %D%/packages/patches/zig-0.9-fix-runpath.patch		\
   %D%/packages/patches/zig-0.9-riscv-support.patch		\

gnu/packages.scm

@@ -518,8 +518,9 @@ return its return value."
                 (location->string (package-location pkg))))
      (match (package-superseded pkg)
        ((? package? new)
-        (info (G_ "package '~a' has been superseded by '~a'~%")
+        (unless (assoc-ref (package-properties pkg) 'supress-supersession-info?)
-              (package-name pkg) (package-name new))
+          (info (G_ "package '~a' has been superseded by '~a'~%")
+                (package-name pkg) (package-name new)))
         new)
        (#f
         pkg)))

gnu/packages/admin.scm

@@ -1302,14 +1302,14 @@ re-executing them as necessary.")
 (define-public inetutils
   (package
     (name "inetutils")
-    (version "2.5")
+    (version "2.7")
     (source (origin
               (method url-fetch)
               (uri (string-append "mirror://gnu/inetutils/inetutils-"
                                   version ".tar.gz"))
               (sha256
                (base32
-                "0q1257ci22g2jbdiqs00mharc1lqkbibdlkhj23f3si6qjxkn17s"))))
+                "11n01vsd51r7qraaaylhhx04hq4s6vcq0896zkz0yp1wvqfbwmm1"))))
     (build-system gnu-build-system)
     (arguments
      (list
@@ -1340,17 +1340,7 @@ re-executing them as necessary.")
                              "\\\""))
       ;; On some systems, 'libls.sh' may fail with an error such as:
       ;; "Failed to tell switch -a apart from -A".
-      #:parallel-tests? #f
+      #:parallel-tests? #f))
-      #:phases (if (target-hurd64?)
-                   #~(modify-phases %standard-phases
-                       (add-after 'unpack 'apply-hurd64-patch
-                         (lambda _
-                           (let ((patch
-                                  #$(local-file
-                                     (search-patch
-                                      "inetutils-hurd64.patch"))))
-                             (invoke "patch" "--force" "-p1" "-i" patch)))))
-                   #~%standard-phases)))
     (inputs
      (list coreutils
            shadow                     ;for login (used in telnetd and rlogind)
@@ -1373,7 +1363,7 @@ hostname.")
 (define-public shadow
   (package
     (name "shadow")
-    (version "4.13")
+    (version "4.19.0")
     (source (origin
               (method url-fetch)
               (uri (string-append
@@ -1381,7 +1371,7 @@ hostname.")
                     "download/" version "/shadow-" version ".tar.xz"))
               (sha256
                (base32
-                "0b6xz415b4y3y5nk3pw9xibv05kln4cjbmhybyncmrx2g5fj9zls"))))
+                "0crbcfdp7ayyii33srinwd0yr27dkx9mbzglx1d0mvhr1z28xclw"))))
     (build-system gnu-build-system)
     (arguments
      `(;; Assume System V `setpgrp (void)', which is the default on GNU
@@ -1390,7 +1380,9 @@ hostname.")
        '(,@(if (target-hurd?)
              '()
              '("--with-libpam"))
-          "shadow_cv_logdir=/var/log"
+         "--disable-logind" ;; no systemd
+         "--without-libbsd" ;; no libbsd
+         "shadow_cv_logdir=/var/log"
           "ac_cv_func_setpgrp_void=yes")
        #:phases
        (modify-phases %standard-phases
@@ -1426,15 +1418,8 @@ hostname.")
              ;; The top-level Makefile.am wrongfully has "SUBDIRS += man"
              ;; under "if ENABLE_REGENERATE_MAN", even though prebuilt man
              ;; pages are available.  Thus, install them manually.
-             (invoke "make" "-C" "man" "install")))
+             (invoke "make" "-C" "man" "install"))))))
-         (add-after 'install-man-pages 'remove-groups
+    (native-inputs (list pkg-config))
-           (lambda* (#:key outputs #:allow-other-keys)
-             ;; Remove `groups', which is already provided by Coreutils.
-             (let* ((out (assoc-ref outputs "out"))
-                    (bin (string-append out "/bin"))
-                    (man (string-append out "/share/man")))
-               (delete-file (string-append bin "/groups"))
-               (for-each delete-file (find-files man "^groups\\."))))))))
     (inputs
      (append (if (target-hurd?)
                  '()
@@ -3156,7 +3141,7 @@ track changes in important system configuration files.")
 (define-public libcap-ng
   (package
     (name "libcap-ng")
-    (version "0.9")
+    (version "0.9.3")
     (source (origin
               (method git-fetch)
               (uri (git-reference
@@ -3165,12 +3150,20 @@ track changes in important system configuration files.")
               (file-name (git-file-name name version))
               (sha256
                (base32
-                "0izrrh2kmhi6dcy5iqcccmx90nwlaqcglhc60sl8n5ds8il14pi8"))))
+                "13iy7dddcslpmmdhybgvfcgznsvpaa4r3fp9ldlpkq592lw8yyva"))))
     (build-system gnu-build-system)
     (arguments
-     `(#:configure-flags
+     (list
-       (list "--disable-static"
+      #:configure-flags
-             "--without-python")))
+      #~(list "--disable-static"
+              "--without-python")
+      #:phases
+      #~(modify-phases %standard-phases
+          (add-after 'unpack 'patch-configure-ac
+            (lambda _
+              (substitute* "configure.ac"
+                (("linux/sock_diag.h" all)
+                 (string-append all " \\"))))))))
     (inputs
      (list libbpf))
     (native-inputs
@@ -4988,16 +4981,16 @@ Python loading in HPC environments.")
   (let ((real-name "inxi"))
     (package
       (name "inxi-minimal")
-      (version "3.3.31-2")
+      (version "3.3.40-1")
       (source
        (origin
          (method git-fetch)
          (uri (git-reference
-               (url "https://github.com/smxi/inxi")
+               (url "https://codeberg.org/smxi/inxi")
                (commit version)))
          (file-name (git-file-name real-name version))
          (sha256
-          (base32 "1fca5minalpmizbxh5kmjiv8xrl7k6g91zn8d84fxmbhsk8vn3kk"))))
+          (base32 "0ivj0dcx7d2hmmkhyql156sb08385rzw640z9kyq4cv1n8ndz58s"))))
       (build-system trivial-build-system)
       (inputs
        (list bash-minimal
@@ -5023,8 +5016,8 @@ Python loading in HPC environments.")
            (copy-recursively (assoc-ref %build-inputs "source")
                              ,(string-append real-name "-" version))
            (with-directory-excursion ,(string-append real-name "-" version)
-             (with-fluids ((%default-port-encoding #f))
+             (patch-shebang "inxi" (list (dirname (search-input-file
-               (substitute* "inxi" (("/usr/bin/env perl") (which "perl"))))
+                                                    %build-inputs "bin/perl"))))
              (let ((bin (string-append %output "/bin")))
                (install-file "inxi" bin)
                (wrap-program (string-append bin "/inxi")
@@ -5039,7 +5032,8 @@ Python loading in HPC environments.")
                                    ((member name '("util-linux"))
                                     (string-append (store-append "/bin") ":"
                                                    (store-append "/sbin")))
-                                   ((member name '("dmidecode" "iproute2"))
+                                   ((member name '("dmidecode" "iproute2" "lvm2"
+                                                   "mdadm"))
                                     (store-append "/sbin"))
                                    (else (store-append "/bin")))))))
                            %build-inputs)))
@@ -5067,6 +5061,7 @@ support forum.  It runs with the @code{/exec} command in most IRC clients.")
     (name "inxi")
     (inputs
      `(("dmidecode" ,dmidecode)
+       ("eudev" ,eudev)
        ("file" ,file)
        ("bind:utils" ,isc-bind "utils") ; dig
        ("gzip" ,gzip)
@@ -5092,11 +5087,14 @@ support forum.  It runs with the @code{/exec} command in most IRC clients.")
        ("perl-time-hires" ,perl-time-hires)
        ("lvm2" ,lvm2)                   ; lvs
        ("mdadm" ,mdadm)
+       ("wayland-utils" ,wayland-utils)
        ;; TODO: Add more inputs:
        ;; ipmi-sensors
        ;; hddtemp
        ;; perl-xml-dumper
        ;; ipmitool
+       ;; wlr-randr
+       ;; vulkan-tools
        ,@(package-inputs inxi-minimal)))))
 
 (define-public pscircle
@@ -5602,69 +5600,61 @@ representation to stdout.")
 (define-public hosts
   (package
     (name "hosts")
-    (version "3.6.3")
+    (version "3.6.5")
-    (source (origin
+    (source
-              (method git-fetch)
+     (origin
-              (uri (git-reference
+       (method git-fetch)
-                    (url "https://github.com/xwmx/hosts")
+       (uri (git-reference
-                    (commit version)))
+              (url "https://github.com/xwmx/hosts")
-              (file-name (git-file-name name version))
+              (commit version)))
-              (sha256
+       (file-name (git-file-name name version))
-               (base32
+       (sha256
-                "1ni4z89kxzgwm26hhx908g04f2h0fypy7lgfa0rvsz8d0wslgcsn"))))
+        (base32 "1kzd4lxlflam87dhbx1jx7bj6v6sa4f2024mfxj2768kp9qapraj"))))
-    (build-system trivial-build-system)
+    (build-system copy-build-system)
+    (native-inputs
+     (list bats)) ;for tests
     (inputs
-     `(("bats" ,bats) ;for test
+     (list gawk
-       ("awk" ,gawk)
+           bash-minimal
-       ("bash" ,bash)
+           coreutils
-       ("coreutils" ,coreutils)
+           diffutils
-       ("diffutils" ,diffutils)
+           grep
-       ("grep" ,grep)
+           ncurses ;for tput
-       ("ncurses" ,ncurses) ;tput
+           sed))
-       ("sed" ,sed)))
     (arguments
-     `(#:modules ((guix build utils))
+     (list
-       #:builder
+      #:install-plan
-       (begin
+      #~'(("hosts" "bin/hosts")
-         (use-modules (guix build utils))
+          ("etc/hosts-completion.bash" "/etc/bash_completion.d/hosts")
-         ;; copy source
+          ("etc/hosts-completion.zsh" "/share/zsh/site-functions/_hosts")
-         (copy-recursively (assoc-ref %build-inputs "source") ".")
+          ("README.md"
-         ;; patch-shebang phase
+           #$(string-append "/share/doc/" name "-" version "/README.md")))
-         (setenv "PATH"
+      #:phases
-                 (string-append (assoc-ref %build-inputs "bash") "/bin"
+      #~(modify-phases %standard-phases
-                                ":" (assoc-ref %build-inputs "awk") "/bin"
+          (add-after 'unpack 'patch-hosts
-                                ":" (assoc-ref %build-inputs "coreutils") "/bin"
+            (lambda* (#:key inputs #:allow-other-keys)
-                                ":" (assoc-ref %build-inputs "diffutils") "/bin"
+              (substitute* "test/test_helper.bash"
-                                ":" (assoc-ref %build-inputs "grep") "/bin"
+                (("export _HOSTS=.*")
-                                ":" (assoc-ref %build-inputs "ncurses") "/bin"
+                 (string-append "export _HOSTS=" #$output "/bin/hosts")))
-                                ":" (assoc-ref %build-inputs "sed") "/bin"
+              (substitute* (cons* "hosts"
-                                ":" "/run/privileged/bin"
+                            ;; *.bash and *.bats.
-                                ":" (getenv "PATH")))
+                            (find-files "test" "\\.bat?sh?.*$"))
-         (substitute* "hosts"
+                (("\\btput\\b") (search-input-file inputs "bin/tput"))
-           (("#!/usr/bin/env bash")
+                (("\\bsed\\b") (search-input-file inputs "bin/sed"))
-            (string-append "#!" (which "bash")
+                (("\\bawk\\b") (search-input-file inputs "bin/awk"))
-                           "\nPATH=" (getenv "PATH"))))
+                (("\\bgrep\\b") (search-input-file inputs "bin/grep"))
-         ;; check phase
+                (("\\bdiff\\b") (search-input-file inputs "bin/diff"))
-         (setenv "TERM" "linux") ;set to tty for test
+                (("\\bcp\\b") (search-input-file inputs "bin/cp"))
-         (invoke (search-input-file %build-inputs "/bin/bats")
+                (("\\bchmod\\b") (search-input-file inputs "bin/chmod")))))
-                 "test")
+          (add-after 'install 'check
-         ;; install phase
+            (lambda* (#:key tests? inputs #:allow-other-keys)
-         (install-file "hosts" (string-append %output "/bin"))
+              (if tests?
-         (let ((bash-completion
+                  (begin
-                (string-append %output "/etc/bash_completion.d")))
+                    (delete-file "hosts") ;Ensure installed hosts is checked.
-           (mkdir-p bash-completion)
+                    (setenv "PATH" "") ;Ensure substitutions were correct.
-           (copy-file "etc/hosts-completion.bash"
+                    (setenv "TERM" "linux") ;Set to tty for test.
-                      (string-append bash-completion "/hosts")))
+                    (invoke (search-input-file inputs "/bin/bats")
-         (let ((zsh-completion
+                            "test"))))))))
-                (string-append %output "/share/zsh/site-functions")))
-           (mkdir-p zsh-completion)
-           (copy-file "etc/hosts-completion.zsh"
-                      (string-append zsh-completion "/_hosts")))
-         (let ((doc (string-append %output "/share/doc/" ,name "-" ,version)))
-           (mkdir-p doc)
-           (install-file "LICENSE" doc)
-           (install-file "README.md" doc))
-         #t)))
     (home-page "https://github.com/xwmx/hosts/")
     (synopsis "Script for editing a foreign distro's @file{/etc/hosts} file")
     (description "Hosts is a command line program for managing

gnu/packages/adns.scm

@@ -1,9 +1,5 @@
 ;;; GNU Guix --- Functional package management for GNU
-;;; Copyright © 2014 Ludovic Courtès <ludo@gnu.org>
+;;; Copyright © 2026 Anderson Torres <anderson.torres.8519@gmail.com>
-;;; Copyright © 2015, 2016, 2018, 2020 Efraim Flashner <efraim@flashner.co.il>
-;;; Copyright © 2018 Ricardo Wurmus <rekado@elephly.net>
-;;; Copyright © 2019, 2021 Marius Bakke <marius@gnu.org>
-;;; Copyright © 2023 Janneke Nieuwenhuizen <janneke@gnu.org>
 ;;;
 ;;; This file is part of GNU Guix.
 ;;;
@@ -21,160 +17,20 @@
 ;;; along with GNU Guix.  If not, see <http://www.gnu.org/licenses/>.
 
 (define-module (gnu packages adns)
-  #:use-module (guix gexp)
+  #:use-module (gnu packages dns)
-  #:use-module (guix licenses)
+  #:use-module (guix deprecation))
-  #:use-module (guix packages)
-  #:use-module (guix download)
-  #:use-module (guix utils)
-  #:use-module (guix build-system cmake)
-  #:use-module (guix build-system gnu)
-  #:use-module (gnu packages m4)
-  #:use-module (gnu packages pkg-config))
 
-(define-public adns
+(define-deprecated/public-alias adns
-  (package
+  (@ (gnu packages dns) adns))
-    (name "adns")
-    (version "1.6.1")
-    (source (origin
-              (method url-fetch)
-              (uri (list (string-append "mirror://gnu/adns/adns-"
-                                        version ".tar.gz")
-                         (string-append
-                           "https://www.chiark.greenend.org.uk/~ian/adns/ftp/adns-"
-                           version ".tar.gz")))
-              (sha256
-               (base32
-                "1k81sjf0yzv6xj35vcxp0ccajxrhhmyly7a57xlbs1kmkdwb6f3i"))))
-    (build-system gnu-build-system)
-    (arguments
-     ;; Make sure the programs under bin/ fine libadns.so.
-     '(#:configure-flags (list (string-append "LDFLAGS=-Wl,-rpath -Wl,"
-                                              (assoc-ref %outputs "out")
-                                              "/lib"))
 
-       ;; XXX: Tests expect real name resolution to work.
+(define-deprecated/public-alias c-ares
-       #:tests? #f))
+  (@ (gnu packages dns) c-ares))
-    (native-inputs
-     (list m4))
-    (home-page "https://www.gnu.org/software/adns/")
-    (synopsis "Asynchronous DNS client library and utilities")
-    (description
-     "GNU adns is a C library that provides easy-to-use DNS resolution
-functionality.  The library is asynchronous, allowing several concurrent
-calls.  The package also includes several command-line utilities for use in
-scripts.")
-    (license gpl3+)))
 
-(define-public c-ares
+(define-deprecated/public-alias c-ares-for-node-lts
-  (package
+  (@ (gnu packages dns) c-ares-for-node-lts))
-    (name "c-ares")
-    (version "1.34.4")
-    (source (origin
-              (method url-fetch)
-              (uri (string-append
-                    "https://github.com/c-ares/c-ares/releases/download/v"
-                    version "/" name "-" version ".tar.gz"))
-              (sha256
-               (base32
-                "0br2msk3bpl5myhjp9vr5j2scpspvbg2fpnz69dcrr4ycpnxnf7s"))))
-    (build-system gnu-build-system)
-    (arguments
-     (list
-      #:phases
-      #~(modify-phases %standard-phases
-          (add-before 'check 'filter-live-tests
-            (lambda _
-              ;; Filter tests that require internet access.
-              (setenv "GTEST_FILTER" "-*.Live*:*.FamilyV4*")))
-          #$@(if (system-hurd?)
-                 #~((add-after 'unpack 'skip-tests
-                      (lambda _
-                        (substitute* "test/ares-test-main.cc"
-                          (("(^| )main *\\(.*" all)
-                           (string-append all "  exit (77);\n")))))
-                    (add-after 'filter-live-tests 'filter-hurd-tests
-                      (lambda _
-                        (setenv "GTEST_FILTER"
-                                (string-append
-                                 (getenv "GTEST_FILTER")
-                                 ":.*Basic/2"
-                                 ":.*CancelImmediate/2"
-                                 ":.*CancelImmediateGetHostByAddr/2"
-                                 ":.*CancelLater/1"
-                                 ":.*FamilyUnspecified/2"
-                                 ":.*FamilyV6/2"
-                                 ":.*GetAddrInfoParallelLookups/1"
-                                 ":.*GetHostByAddrDestroy/2"
-                                 ":.*GetHostByNameCNAMENoData/2"
-                                 ":.*GetHostByNameDestroyAbsolute/2"
-                                 ":.*GetHostByNameDestroyRelative/2"
-                                 ":.*GetHostByNameParallelLookups/1"
-                                 ":.*HostAlias/2"
-                                 ":.*HostAliasMissing/2"
-                                 ":.*HostAliasMissingFile/2"
-                                 ":.*NotImplResponse/2"
-                                 ":.*RefusedResponse/2"
-                                 ":.*Resend/1"
-                                 ":.*RetryWithoutEDNS/2"
-                                 ":.*SearchDomains/2"
-                                 ":.*SearchDomainsBare/2"
-                                 ":.*SearchDomainsServFailOnAAAA/2"
-                                 ":.*SearchDomainsWithResentReply/1"
-                                 ":.*SearchHighNdots/2"
-                                 ":.*SearchNoDataThenFail/2"
-                                 ":.*SearchNoDataThenNoDataBare/2"
-                                 ":.*SearchNoDataThenSuccess/2"
-                                 ":.*ServFailResponse/2"
-                                 ":.*SimpleQuery/2"
-                                 ":.*SockCallback/2"
-                                 ":.*SockConfigureCallback/2"
-                                 ":.*SortListV4/2"
-                                 ":.*SortListV6/2"
-                                 ":.*ThirdServer/2"
-                                 ":.*TruncationRetry/1"
-                                 ":.*UnspecifiedFamilyCname6A4/2"
-                                 ":.*UnspecifiedFamilyV4/2"
-                                 ":.*UnspecifiedFamilyV6/2")))))
-                 #~()))))
-    (native-inputs
-     (list pkg-config))
-    (home-page "https://c-ares.haxx.se/")
-    (synopsis "C library for asynchronous DNS requests")
-    (description
-     "C-ares is a C library that performs DNS requests and name resolution
-asynchronously.  It is intended for applications which need to perform DNS
-queries without blocking, or need to perform multiple DNS queries in parallel.
-The primary examples of such applications are servers which communicate with
-multiple clients and programs with graphical user interfaces.")
-    (license (x11-style "https://c-ares.haxx.se/license.html"))))
 
-(define-public c-ares-for-node-lts
+(define-deprecated/public-alias c-ares-for-node-bootstrap
-  (hidden-package c-ares))
+  (@ (gnu packages dns) c-ares-for-node-bootstrap))
 
-(define-public c-ares-for-node-bootstrap
+(define-deprecated/public-alias c-ares/cmake
-  (hidden-package
+  (@ (gnu packages dns) c-ares/cmake))
-   (package
-     (inherit c-ares)
-     (version "1.18.1")
-     (source (origin
-               (method url-fetch)
-               (uri (string-append
-                     "https://c-ares.haxx.se/download/c-ares-" version
-                     ".tar.gz"))
-               (sha256
-                (base32
-                 "1kxviskwsaa7dcgscvssxa8ps88pdq7kq4z93gxvz7sam2l54z8s")))))))
-
-;; gRPC requires a c-ares built with CMake in order to get the .cmake modules.
-;; We can not build c-ares itself with CMake because that would introduce a
-;; circular dependency through nghttp2.
-;; XXX: It would be nice if we could extract the modules somehow and make them
-;; work with the "normal" c-ares package instead of building a whole new library.
-(define-public c-ares/cmake
-  (hidden-package
-   (package
-     (inherit c-ares)
-     (build-system cmake-build-system)
-     (arguments
-      `(;; XXX: Tests require name resolution (the normal variant runs no tests).
-        #:tests? #f)))))

gnu/packages/aidc.scm

@@ -370,7 +370,7 @@ This package includes the following programs:
            libjpeg-turbo
            perl
            python
-           v4l-utils-minimal))
+           v4l-utils))
     (propagated-inputs
      ;; These are in 'requires' field of .pc files.
      (list glib gtk+))

gnu/packages/algebra.scm

@@ -1,7 +1,7 @@
 ;;; GNU Guix --- Functional package management for GNU
 ;;; Copyright © 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2022, 2023, 2024, 2025 Andreas Enge <andreas@enge.fr>
 ;;; Copyright © 2013, 2015, 2017, 2018, 2021 Ludovic Courtès <ludo@gnu.org>
-;;; Copyright © 2016-2025 Nicolas Goaziou <mail@nicolasgoaziou.fr>
+;;; Copyright © 2016-2026 Nicolas Goaziou <mail@nicolasgoaziou.fr>
 ;;; Copyright © 2014, 2018 Mark H Weaver <mhw@netris.org>
 ;;; Copyright © 2016, 2018, 2019, 2021, 2023 Ricardo Wurmus <rekado@elephly.net>
 ;;; Copyright © 2017, 2020-2022 Efraim Flashner <efraim@flashner.co.il>
@@ -406,7 +406,7 @@ precision.")
 (define-public giac
   (package
     (name "giac")
-    (version "2.0.0-10")
+    (version "2.0.0-21")
     (source
      (origin
        (method url-fetch)
@@ -418,7 +418,7 @@ precision.")
               "https://www-fourier.ujf-grenoble.fr/~parisse/debian/dists/"
               "stable/main/source/giac_" version ".tar.gz"))
        (sha256
-        (base32 "1lzb0jjmkg5ml1qfl0m00qqng4sxgfqwrbq10gpkp4b301k2ckv1"))))
+        (base32 "1j6bip76hhqvycapf7xy26y0b8g5zzx4gwkfsr7bf6m2h71a2zry"))))
     (build-system gnu-build-system)
     (arguments
      (list

gnu/packages/android.scm

@@ -765,7 +765,7 @@ file system.")
        (sha256
         (base32 "0r3xwk8xsfxvmxyw3d57sy2i9by24g0l1jl40735jiac9mypcg7n"))))
     (build-system pyproject-build-system)
-    (inputs (list python-requests python-argcomplete python-urllib3
+    (propagated-inputs (list python-requests python-argcomplete python-urllib3
                   python-looseversion gnupg))
     (native-inputs (list python-setuptools python-wheel python-requests-cache
                          python-defusedxml))
@@ -773,8 +773,7 @@ file system.")
      (list $SSL_CERT_FILE))
     (arguments
      (list
-      #:test-flags
+      #:test-backend #~'unittest
-      #~(list "-k" "test_*")
       #:phases
       #~(modify-phases %standard-phases
           (add-after 'unpack 'patch-tests
@@ -793,11 +792,7 @@ file system.")
             (lambda _
               (substitute* "sdkmanager.py"
                 (("gpgv")
-                 (string-append #$(this-package-input "gnupg") "/bin/gpgv")))))
+                 (string-append #$(this-package-input "gnupg") "/bin/gpgv"))))))))
-          (replace 'check
-            (lambda* (#:key tests? test-flags #:allow-other-keys)
-              (when tests?
-                (apply invoke "python" "-m" "unittest" test-flags)))))))
     (home-page "https://gitlab.com/fdroid/sdkmanager")
     (synopsis "Replacement for Android sdkmanager written in Python")
     (description
@@ -1182,14 +1177,16 @@ for communicating with Xiaomi smart appliances over miIO and MIoT protocols.")
 (define-public fdroidserver
   (package
     (name "fdroidserver")
-    (version "2.4.2")
+    (version "2.4.3")
     (source
      (origin
-       (method url-fetch)
+       (method git-fetch)
-       (uri (pypi-uri "fdroidserver" version))
+       (uri (git-reference
+              (url "https://gitlab.com/fdroid/fdroidserver")
+              (commit version)))
+       (file-name (git-file-name name version))
        (sha256
-        (base32
+        (base32 "1745fqxr2qfrls4wr6x9w1262b9pxmw9yvzd9b71ya2qmj74q17n"))))
-         "06xybginrwi5c7bw000wz5s5hzi0aqrxskzwh8qc6wv463w2djax"))))
     (build-system pyproject-build-system)
     (arguments
      (list
@@ -1200,22 +1197,17 @@ for communicating with Xiaomi smart appliances over miIO and MIoT protocols.")
             (lambda _
               (setenv "HOME" "/tmp"))))))
     (propagated-inputs
-     (list python-androguard
+     (list python-platformdirs
+           python-androguard
            python-apache-libcloud
-           python-argcomplete
            python-asn1crypto
            python-clint
            python-defusedxml
-           python-docker
            python-gitpython
-           python-mwclient
            python-oscrypto
            python-paramiko
            python-pillow
-           python-platformdirs
            python-puremagic
-           python-pyasn1
-           python-pyasn1-modules
            python-pyyaml
            python-qrcode
            python-requests
@@ -1387,6 +1379,7 @@ mounted via FUSE.")
        (uri (git-reference
              (url "https://github.com/anestisb/android-simg2img")
              (commit version)))
+       (file-name (git-file-name name version))
        (sha256
         (base32
          "0drwvqxbhajka580j93z8ldckhjlpr0i84nh20krdpxcp54xvldh"))))

gnu/packages/anthy.scm

@@ -33,9 +33,8 @@
        ;; The URI does not appear to be easily guessable.  For
        ;; example, you cannot download version "9100g" simply
        ;; by replacing "9100h" in the URI.
-       (uri (list (string-append "https://ftp.jaist.ac.jp/pub/Linux/Gentoo/"
+       (uri (string-append "https://ftp.jaist.ac.jp/pub/Linux/Gentoo/"
-                                 "distfiles/31/anthy-9100h.tar.gz")
+                           "distfiles/31/anthy-9100h.tar.gz"))
-                  "https://osdn.dl.osdn.net/anthy/37536/anthy-9100h.tar.gz"))
        (sha256
         (base32 "0ism4zibcsa5nl77wwi12vdsfjys3waxcphn1p5s7d0qy1sz0mnj"))))
     (build-system gnu-build-system)

gnu/packages/apl.scm

@@ -30,20 +30,26 @@
   #:use-module (guix packages)
   #:use-module (guix build-system gnu)
   #:use-module (guix build-system trivial)
+  #:use-module (gnu packages algebra)
+  #:use-module (gnu packages base)
   #:use-module (gnu packages bash)
   #:use-module (gnu packages compression)
   #:use-module (gnu packages gettext)
+  #:use-module (gnu packages gtk)
+  #:use-module (gnu packages image)
   #:use-module (gnu packages java)
   #:use-module (gnu packages maths)
   #:use-module (gnu packages pcre)
+  #:use-module (gnu packages pkg-config)
   #:use-module (gnu packages readline)
-  #:use-module (gnu packages sqlite))
+  #:use-module (gnu packages sqlite)
+  #:use-module (gnu packages xorg))
 
 (define-public apl
-  (let ((revision 1550))
+  (let ((revision 1977))
     (package
       (name "apl")
-      (version (string-append "1.8-r" (number->string revision)))
+      (version (string-append "2.0.1-r" (number->string revision)))
       (source
        (origin
          (method svn-fetch)
@@ -52,12 +58,18 @@
                (revision revision)))
          (file-name (git-file-name name version))
          (sha256
-          (base32 "1bgc3a09f35zrqq2irhm1hspppnxjqas0fmcw14hkc7910br9ip3"))))
+          (base32 "1llm1hqpfd71jrhd4pizhmvvca5wr18v8zqfajwmvjjxcmzfkvv1"))))
       (build-system gnu-build-system)
       (home-page "https://www.gnu.org/software/apl/")
+      (native-inputs (list gettext-minimal which pkg-config))
       (inputs
        (list gettext-minimal
+             libxcb
+             fftw
              openblas
+             gsl
+             libpng
+             gtk+
              pcre2
              readline
              sqlite))
@@ -69,15 +81,11 @@
              #~(modify-phases %standard-phases
                  (add-before 'configure 'fix-configure
                    (lambda _
-                     (substitute* "buildtag.sh"
+                     (substitute* "configure"
-                       ;; Don't exit on failed SVN-related calls.
+                       ;; Manually set the SVN revision, since the directory
-                       (("^ +return 0\n") "")
+                       ;; is unversioned and we know it anyway.
-                       ;; Manually set the SVN revision, since the directory is
+                       (("\\$apl_ARCHIVE_SVNINFO")
-                       ;; unversioned and we know it anyway.
+                        #$(number->string revision))))))))
-                       (("^SVNINFO=.*")
-                        (string-append "SVNINFO=" #$(number->string revision) "\n"))
-                       ;; Requires running ‘svn info’ on a versioned directory.
-                       (("\\\\\"\\$ARCHIVE_SVNINFO\\\\\"") "\\\"\\\"")))))))
       (synopsis "APL interpreter")
       (description
        "GNU APL is a free interpreter for the programming language APL.  It is

gnu/packages/appimage.scm

@@ -19,9 +19,11 @@
 (define-module (gnu packages appimage)
   #:use-module ((guix licenses) #:prefix license:)
   #:use-module (gnu packages base)
+  #:use-module (gnu packages c)
   #:use-module (gnu packages compression)
   #:use-module (gnu packages file-systems)
   #:use-module (gnu packages linux)
+  #:use-module (gnu packages pkg-config)
   #:use-module (gnu packages)
   #:use-module (guix build-system gnu)
   #:use-module (guix gexp)
@@ -30,9 +32,9 @@
   #:use-module (guix utils))
 
 (define-public appimage-type2-runtime
-  (let ((revision "0")
+  (let ((revision "1")
         ;; No releases, just the latest commit.
-        (commit "47b665594856b4e8928f8932adcf6d13061d8c30"))
+        (commit "caf24f9f712084686bfc24a70b75e50df0aefb9c"))
     (package
       (name "appimage-type2-runtime")
       (version (git-version "continuous" revision commit))
@@ -44,16 +46,16 @@
                 (commit commit)))
          (file-name (git-file-name name version))
          (sha256
-          (base32 "0954crhlbapxis96g1s0vfpf78ybr64zvjalak387ksxj560g44x"))))
+          (base32 "17z0byws3dp375wcyq5xwy5npqy7hslqw21n677dp38z4f940nzv"))))
       (build-system gnu-build-system)
       (arguments
        (list
         #:tests? #f                     ; No tests
         #:make-flags
-        #~(list "-Csrc/runtime" "runtime-fuse3"
+        #~(list "-Csrc/runtime" "runtime"
                 (string-append "CC=" #$(cc-for-target))
                 (string-append
-                 "CFLAGS=" "-I" #$(this-package-input "fuse") "/include/fuse/"
+                 "CFLAGS=" "-I" #$(this-package-input "fuse") "/include/fuse3/"
                  " -DGIT_COMMIT='\"" "guix-" #$version "\"'"
                  " -D_FILE_OFFSET_BITS=64"
                  " -static"
@@ -64,17 +66,22 @@
           (ice-9 binary-ports))
         #:phases
         #~(modify-phases %standard-phases
+            (add-after 'unpack 'use-pkgconfig-flags
+              (lambda _
+                (substitute* "src/runtime/Makefile"
+                  (("-lmimalloc")
+                   "$(pkg-config --cflags mimalloc)"))))
             (delete 'configure)
             (replace 'install
               (lambda _
-                (install-file "src/runtime/runtime-fuse3"
+                (install-file "src/runtime/runtime"
                               (string-append #$output "/bin"))))
             ;; Must be after all elf reliant phases.  Used to identify the
             ;; executable as an AppImage as per the specification.
             (add-after 'make-dynamic-linker-cache 'set-magic-bytes
               (lambda _
                 (let ((port (open (string-append #$output
-                                                 "/bin/runtime-fuse3")
+                                                 "/bin/runtime")
                                   (logior O_WRONLY))))
                   (seek port 8 SEEK_SET)
                   (put-bytevector port #vu8(#x41 #x49 #x02))
@@ -84,9 +91,12 @@
               (this-package-input "fuse")
               (gexp-input (this-package-input "zstd") "static")
               (gexp-input (this-package-input "zlib") "static"))))
+      (native-inputs (list pkg-config))
       ;; Only needed at build time.
-      (inputs (list squashfuse-for-appimage
+      (inputs (list `(,fuse "out")
-                    fuse-for-appimage
+                    `(,fuse "static")
+                    mimalloc
+                    squashfuse-for-appimage
                     `(,zstd "static")
                     `(,zlib "static")))
       (synopsis "Runtime for executing AppImages")

gnu/packages/apr.scm

@@ -34,14 +34,14 @@
 (define-public apr
   (package
     (name "apr")
-    (version "1.7.4")
+    (version "1.7.6")
     (source (origin
              (method url-fetch)
              (uri (string-append "mirror://apache/apr/apr-"
                                  version ".tar.bz2"))
              (sha256
               (base32
-               "0xsmqgjiyw3s6va5dm86djnjzg9r0qc1zsldwz4sd8pkhglqsr7w"))
+               "0cpbbmng9ir8rjl9nxwljkzmrkpk4b1nsj8vg4ssfpapsa90s0s9"))
              (patches
               (search-patches "apr-skip-getservbyname-test.patch"))
              (patch-flags '("-p0"))))

gnu/packages/audio.scm

@@ -42,7 +42,7 @@
 ;;; Copyright © 2022 Andy Tai <atai@atai.org>
 ;;; Copyright © 2023 Sergiu Ivanov <sivanov@colimite.fr>
 ;;; Copyright © 2023 David Thompson <dthompson2@worcester.edu>
-;;; Copyright © 2023 Sharlatan Hellseher <sharlatanus@gmail.com>
+;;; Copyright © 2023, 2025-2026 Sharlatan Hellseher <sharlatanus@gmail.com>
 ;;; Copyright © 2023 Gabriel Wicki <gabriel@erlikon.ch>
 ;;; Copyright © 2023 Zheng Junjie <873216071@qq.com>
 ;;; Copyright © 2023 Parnikkapore <poomklao@yahoo.com>
@@ -62,6 +62,7 @@
 ;;; Copyright © 2026 Luis Guilherme Coelho <lgcoelho@disroot.org>
 ;;; Copyright © 2026 Noé Lopez <noelopez@free.fr>
 ;;; Copyright © 2026 Carlos Durán Domínguez <wurt@wurt.eu>
+;;; Copyright © 2026 Daniel Martins <email@danielfm.me>
 ;;;
 ;;; This file is part of GNU Guix.
 ;;;
@@ -2316,13 +2317,13 @@ object library.")
                 (file-name (git-file-name name version))
                 (sha256
                  (base32
-                  "1jds2l3cb96b02jxd7lmrjjl9s7mylnrvg6fpw0j8c141bk8vyg3"))))
+                  "1jds2l3cb96b02jxd7lmrjjl9s7mylnrvg6fpw0j8c141bk8vyg3"))
+                (patches
+                 (search-patches "tao-synth-include-string-you-use.patch"))))
       (build-system cmake-build-system)
       (arguments (list #:tests? #false))  ;there are no tests
       (inputs
        (list glfw freeglut))
-      (native-inputs
-       (list gcc-7))
       (home-page "https://github.com/lucasw/tao_synth")
       (synopsis "Sound synthesis with physical models")
       (description "Tao is a software package for sound synthesis using physical
@@ -3438,7 +3439,7 @@ from being able to mix multiple JACK audio streams.")
             (commit (string-append "v" version))))
       (file-name (git-file-name name version))
       (sha256
-       (base32 "08ji4lg24flzi6g3yaavfq8hz3kr98q2ripk5m4qk9z172qxbbc9"))))
+       (base32 "0fvnvr74q5khxlj5sylfnkblydmwgdbvj04mhdqw0zzmfqwignhd"))))
     (build-system meson-build-system)
     (arguments
      (list
@@ -3703,6 +3704,44 @@ compensation, (de)interleaving, and byte-swapping
     ;; original developer.
     (license license:expat)))
 
+(define-public rtcqs
+  (package
+    (name "rtcqs")
+    (version "0.6.7")
+    (source
+     (origin
+       (method git-fetch)
+       (uri (git-reference
+             (url "https://codeberg.org/rtcqs/rtcqs")
+             (commit (string-append "v" version))))
+       (file-name (git-file-name name version))
+       (sha256
+        (base32 "1kc3niyaq4m8di68832pgfb1b0m54q5gm68dwlzwwilgxi61ifzc"))))
+    (build-system pyproject-build-system)
+    (arguments
+     (list
+      #:tests? #f ;no test suite
+      #:phases
+      #~(modify-phases %standard-phases
+          (add-after 'unpack 'remove-gui
+            (lambda _
+              (substitute* "pyproject.toml"
+                (("\"FreeSimpleGUI\",?")
+                 "")
+                (("rtcqs_gui = \"rtcqs\\.rtcqs_gui:main\"")
+                 ""))
+              (delete-file "src/rtcqs/rtcqs_gui.py")
+              (delete-file "src/rtcqs/rtcqs_qt_gui.py"))))))
+    (native-inputs (list python-setuptools))
+    (home-page "https://codeberg.org/rtcqs/rtcqs")
+    (synopsis "Linux audio real-time performance analyzer")
+    (description
+     "rtcqs analyzes a Linux system to detect possible bottlenecks that could
+have a negative impact on real-time audio performance.  It checks kernel
+configuration, IRQ priorities, CPU governor, swappiness, and other settings
+relevant to low-latency audio work.")
+    (license license:expat)))
+
 (define-public rtosc
   (package
     (name "rtosc")
@@ -6358,6 +6397,59 @@ It is currently fairly complete for PCM devices, and has some support for
 mixers.")
     (license license:psfl)))
 
+(define-public python-pyo
+  (package
+    (name "python-pyo")
+    (version "1.0.6")
+    (source
+     (origin
+       (method git-fetch)
+       (uri (git-reference
+              (url "https://github.com/belangeo/pyo")
+              (commit version)))
+       (file-name (git-file-name name version))
+       (sha256
+        (base32 "1igz75kv94dav28rzz19gckgfgdli05q5ghadlvm03ia7xd9l5zm"))))
+    (build-system pyproject-build-system)
+    (arguments
+     (list
+     ;; TODO: collecting ... Fatal Python error: Segmentation fault
+      #:tests? #f
+      #:phases
+      #~(modify-phases %standard-phases
+          (add-before 'sanity-check 'set-HOME
+            (lambda _
+              (setenv "HOME" "/tmp"))))))
+    (native-inputs
+     (list python-pytest
+           python-setuptools))
+    (inputs
+     (list liblo
+           libsndfile
+           portaudio
+           portmidi))
+    (propagated-inputs
+     (list python-wxpython))
+    (home-page "https://github.com/belangeo/pyo")
+    (synopsis "Python module to build digital signal processing program")
+    (description
+     "pyo is a Python module containing classes for a wide variety of audio
+signal processing types.
+
+With pyo, user will be able to include signal processing chains directly in
+Python scripts or projects, and to manipulate them in real time through the
+interpreter.  Tools in pyo module offer primitives, like mathematical
+operations on audio signal, basic signal processing (filters, delays,
+synthesis generators, etc.), but also complex algorithms to create sound
+granulation and others creative audio manipulations.
+
+pyo supports OSC protocol (Open Sound Control), to ease communications between
+softwares, and MIDI protocol, for generating sound events and controlling
+process parameters.  pyo allows creation of sophisticated signal processing
+chains with all the benefits of a mature, and widely used, general programming
+language.")
+    (license license:lgpl3+)))
+
 (define-public ldacbt
   (package
     (name "ldacbt")
@@ -7990,6 +8082,7 @@ Home Page}.")
              (commit version)
              ;; For test files.
              (recursive? #true)))
+       (file-name (git-file-name name version))
        (sha256
         (base32 "065x43hx670rjrclxi4hiqxscllb16v9s7myjvg7rd5pd3y0k7sg"))))
     (build-system pyproject-build-system)
@@ -8120,7 +8213,7 @@ and DSD streams.")
 (define-public qpwgraph
   (package
     (name "qpwgraph")
-    (version "0.9.9")
+    (version "1.0.0")
     (source (origin
               (method git-fetch)
               (uri (git-reference
@@ -8129,7 +8222,7 @@ and DSD streams.")
               (file-name (git-file-name name version))
               (sha256
                (base32
-                "03001pvcbvr206k00751232gm50x1icf086z8c5hiakl2ym79gwl"))))
+                "0l3fflfpwkqy4iif8ifzzr3yy39ahzqdixx5g3rhj3zzbaysj73h"))))
     (build-system cmake-build-system)
     (arguments
      (list #:tests? #f))                ; no tests

gnu/packages/axoloti.scm

@@ -341,7 +341,7 @@ runtime.")
        ("java-jgit" ,java-jgit-4.2)
        ("axoloti-runtime" ,axoloti-runtime)))
     (native-inputs
-     (list ant zip ; for repacking the jar
+     (list ant/java7 zip ; for repacking the jar
            unzip))
     (description
      "The Axoloti patcher offers a “patcher” environment similar to Pure Data
@@ -647,7 +647,7 @@ This package provides the runtime.")
        ("java-slf4j-api" ,java-slf4j-api)
        ("ksoloti-runtime" ,ksoloti-runtime)))
     (native-inputs
-     (list ant zip                      ;for repacking the jar
+     (list ant/java7 zip                      ;for repacking the jar
            unzip))
     (description
      "Ksoloti is an environment for generating and processing digital audio.

gnu/packages/backup.scm

@@ -547,7 +547,7 @@ remain fully idle, saving power and producing less noise.")
          "0miklk4bqblpyzh1bni4x6lqn88fa8fjn15x1k1n8bxkx60nlymd"))))
     (build-system gnu-build-system)
     (inputs
-     (list librsync-0.9))
+     (list librsync))
     (arguments
      `(#:make-flags `("CFLAGS=-fcommon"
                       ,(string-append "PREFIX=" (assoc-ref %outputs "out"))

gnu/packages/benchmark.scm

@@ -944,7 +944,20 @@ configurable through a set of options.")
       #~(list (string-append
                "CC=" #$(this-package-input "openmpi") "/bin/mpicc")
               (string-append
-               "CXX=" #$(this-package-input "openmpi") "/bin/mpicxx"))))
+               "CXX=" #$(this-package-input "openmpi") "/bin/mpicxx"))
+      #:phases
+      #~(modify-phases %standard-phases
+          ;; OSU installs its binaries to /libexec. Have a symlink in /bin to
+          ;; improve user experience.
+          (add-after 'install 'symlink-binaries-in-bin
+            (lambda _
+              (mkdir-p (string-append #$output "/bin"))
+              (for-each (lambda (file)
+                          (symlink file
+                                   (string-append #$output "/bin/"
+                                                  (basename file))))
+                        (find-files (string-append #$output
+                                                   "/libexec"))))))))
     (home-page "https://mvapich.cse.ohio-state.edu/benchmarks/")
     (synopsis "Benchmarking suite from the MVAPICH project")
     (description

gnu/packages/bioconductor.scm

@@ -3436,14 +3436,14 @@ the @code{HorvathMethylChip40} (Mammal40) array.")
 (define-public r-systempiperdata
   (package
     (name "r-systempiperdata")
-    (version "2.14.5")
+    (version "2.14.6")
     (source
      (origin
        (method url-fetch)
        (uri (bioconductor-uri "systemPipeRdata" version
                               'experiment))
        (sha256
-        (base32 "1yrq1vyc0pmp3iv621cvdsavlarcca3z4bbxfzbg0ny3fyqp67pb"))))
+        (base32 "1j7h40hcm0gyahmlilvlb83ddmwrarqn319qwpnrgwcji8fm92jd"))))
     (properties `((upstream-name . "systemPipeRdata")))
     (build-system r-build-system)
     (propagated-inputs (list r-biocgenerics r-biostrings r-jsonlite r-remotes))
@@ -4552,15 +4552,9 @@ these biases and construct statistically consistent estimators.")
     (build-system r-build-system)
     (arguments
      (list
-      #:phases
+      #:skipped-tests
-      '(modify-phases %standard-phases
+      ;; This test needs Internet access.
-         (add-after 'unpack 'skip-bad-tests
+      '(("test-examples.R" ".*find_taxonomy\\(\\) is working.*"))))
-           (lambda _
-             ;; This test needs Internet access.
-             (with-directory-excursion "tests/testthat"
-               (substitute* "test-examples.R"
-                 ((".*find_taxonomy\\(\\) is working.*" m)
-                  (string-append m "skip('guix')\n")))))))))
     (propagated-inputs
      (list r-ape
            r-assertthat
@@ -4611,13 +4605,13 @@ to understand their data better and discover new insights.")
 (define-public r-anndatar
   (package
     (name "r-anndatar")
-    (version "1.0.1")
+    (version "1.0.2")
     (source
      (origin
        (method url-fetch)
        (uri (bioconductor-uri "anndataR" version))
        (sha256
-        (base32 "1vi9aqgdjy0nlbsk7628sz12jsxd9bfb79yxhh0ngijpxj9sxd4p"))))
+        (base32 "1gn1yyfs08a77zrl4cidahxim3kgcvpbsrgfxxnhhrka57xcylld"))))
     (properties `((upstream-name . "anndataR")))
     (build-system r-build-system)
     (arguments
@@ -4670,14 +4664,13 @@ directly access various slots (e.g. X, obs, var), or convert the data into
     (build-system r-build-system)
     (arguments
      (list
+      #:test-directory "inst/unitTests"
+      ;; These tests require internet access.
+      #:skipped-tests
+      '("test_recipe.R"
+        "test_webAccessFunctions.R")
       #:phases
       '(modify-phases %standard-phases
-         (add-after 'unpack 'delete-bad-tests
-           (lambda _
-             ;; These tests require internet access.
-             (for-each delete-file
-                       '("inst/unitTests/test_recipe.R"
-                         "inst/unitTests/test_webAccessFunctions.R"))))
          (add-before 'install 'set-home
            (lambda _ (setenv "HOME" "/tmp"))))))
     (propagated-inputs
@@ -5244,13 +5237,13 @@ structures: @code{ExpressionSet}, @code{AffyBatch}, @code{NChannelSet}.")
 (define-public r-arrayqualitymetrics
   (package
     (name "r-arrayqualitymetrics")
-    (version "3.64.0")
+    (version "3.66.0")
     (source (origin
               (method url-fetch)
               (uri (bioconductor-uri "arrayQualityMetrics" version))
               (sha256
                (base32
-                "1kz2d40wx2ksy9dz1z3wylcj7y7ad9z8xphsnz39j02m4g5mbvlp"))))
+                "0y9k81vwqq74zfdrc2hvx7mg0l7572hvrsby00m20z034j7f9pmi"))))
     (properties
      '((upstream-name . "arrayQualityMetrics")
        ;; We don't need these.
@@ -5272,7 +5265,7 @@ structures: @code{ExpressionSet}, @code{AffyBatch}, @code{NChannelSet}.")
                              r-svglite
                              r-vsn
                              r-xml))
-    (native-inputs (list r-knitr))
+    (native-inputs (list r-biocstyle r-knitr))
     (home-page "https://bioconductor.org/packages/arrayQualityMetrics")
     (synopsis "Quality metrics report for microarray data sets")
     (description
@@ -6110,10 +6103,8 @@ retrieval analyses, or similar technologies.")
     (build-system r-build-system)
     (arguments
      (list
-      #:phases
+      ;; This requires internet access.
-      '(modify-phases %standard-phases
+      #:skipped-tests '("test-download.R")))
-         (add-after 'unpack 'disable-bad-tests
-           (lambda _ (delete-file "tests/testthat/test-download.R"))))))
     (propagated-inputs (list cmake r-dir-expiry))
     (native-inputs (list r-knitr r-testthat))
     (home-page "https://github.com/LTLA/biocmake")
@@ -6421,17 +6412,6 @@ objects.")
         (base32 "189akh4lpbp0dzgflb3nb3vi94bhmsj7qkcl597dnnzxqz00hsb2"))))
     (properties `((upstream-name . "CoreGx")))
     (build-system r-build-system)
-    (arguments
-     (list
-      #:phases
-      '(modify-phases %standard-phases
-         (add-after 'unpack 'disable-bad-tests
-           (lambda _
-             ;; It is unclear why 3 tests fail.
-             (with-directory-excursion "tests/testthat"
-               (substitute* "test-LongTable-utils.R"
-                 ((".*doesn't miss assay observations.*" m)
-                  (string-append m "skip('guix')\n")))))))))
     (propagated-inputs
      (list r-bench
            r-biobase
@@ -7900,13 +7880,13 @@ Kallisto, Salmon, StringTie, Cufflinks/Cuffdiff etc.")
 (define-public r-isva
   (package
     (name "r-isva")
-    (version "1.9")
+    (version "1.10")
     (source (origin
               (method url-fetch)
               (uri (cran-uri "isva" version))
               (sha256
                (base32
-                "05qx9q0kg4ma23v4abhihw0vz017nq6hv2jzsiqx4d20ngh1dl4z"))))
+                "1im1bwbf6l88m4bwwwr0z2x8bvw927s3fqbwc06s5240wc8syjpl"))))
     (properties `((upstream-name . "isva")))
     (build-system r-build-system)
     (propagated-inputs (list r-fastica r-jade r-qvalue))
@@ -8673,13 +8653,13 @@ on Bioconductor or which replace R functions.")
 (define-public r-biomart
   (package
     (name "r-biomart")
-    (version "2.66.1")
+    (version "2.66.2")
     (source (origin
               (method url-fetch)
               (uri (bioconductor-uri "biomaRt" version))
               (sha256
                (base32
-                "1cmzay4z9s183dc001rxfa81ql67la9y8m0p0wsn2iwzxzx94n8g"))))
+                "1awsfklcs35vrmjkc12bk5ys9w7ib0799i3d0k138y44a0837pph"))))
     (properties
      `((upstream-name . "biomaRt")))
     (build-system r-build-system)
@@ -10337,13 +10317,13 @@ Enrichment Analysis} (GSEA).")
 (define-public r-gsva
   (package
     (name "r-gsva")
-    (version "2.4.6")
+    (version "2.4.8")
     (source (origin
               (method url-fetch)
               (uri (bioconductor-uri "GSVA" version))
               (sha256
                (base32
-                "08i2s5zlm75mr7zl357cic2zxcy7aqqfv67xb0w67n48cw016ri6"))))
+                "0p9awi85dbmmyplhdfz0in4nhaavb58gpf48kqyp30rcc3v5a8h0"))))
     (properties `((upstream-name . "GSVA")))
     (build-system r-build-system)
     (propagated-inputs (list r-biobase
@@ -10738,6 +10718,54 @@ nucleotide sequence analysis.  The package is primarily useful to developers
 of other R packages who wish to make use of HTSlib.")
     (license license:lgpl2.0+)))
 
+(define-public r-rliger
+  (package
+    (name "r-rliger")
+    (version "2.2.1")
+    (source
+     (origin
+       (method git-fetch)
+       (uri (git-reference
+              (url "https://github.com/welch-lab/liger")
+              (commit (string-append "v" version))))
+       (file-name (git-file-name name version))
+       (sha256
+        (base32 "1w849km9b347m56qwr5lr6ymdk7wv22hr224riscm0zrnx402yb3"))))
+    (properties `((upstream-name . "rliger")))
+    (build-system r-build-system)
+    (propagated-inputs (list r-cli
+                             r-delayedarray
+                             r-dplyr
+                             r-ggplot2
+                             r-hdf5array
+                             r-hdf5r
+                             r-leidenalg
+                             r-lifecycle
+                             r-magrittr
+                             r-matrix
+                             r-patchwork
+                             r-rann
+                             r-rcpp
+                             r-rcpparmadillo
+                             r-rcppplanc
+                             r-rcppprogress
+                             r-rlang
+                             r-s4vectors
+                             r-scales
+                             r-uwot))
+    (native-inputs
+     (list r-circlize r-complexheatmap r-knitr r-testthat r-viridis))
+    (home-page "https://github.com/welch-lab/liger")
+    (synopsis "Linked inference of genomic experimental relationships")
+    (description
+     "LIGER is a package for integrating and analyzing multiple single-cell
+datasets. It relies on integrative non-negative matrix factorization to
+identify shared and dataset-specific factors.")
+    (license license:gpl3)))
+
+(define-deprecated-package r-liger
+  r-rliger)
+
 (define-public r-rnbeads
   (package
     (name "r-rnbeads")
@@ -11117,13 +11145,13 @@ different technologies, including microarrays, RNA-seq, and quantitative PCR.")
 (define-public r-maaslin2
   (package
     (name "r-maaslin2")
-    (version "1.22.0")
+    (version "1.24.1")
     (source
      (origin
        (method url-fetch)
        (uri (bioconductor-uri "Maaslin2" version))
        (sha256
-        (base32 "10hdjhi1ykk513hzvs0bi6avzghqmkqns8knhz3ycv7bj3ynp70x"))))
+        (base32 "0z8vfx6db6xfvqdhg6n8jx3fmgwvq22facsacq6ym867kw2jafiz"))))
     (properties `((upstream-name . "Maaslin2")))
     (build-system r-build-system)
     (propagated-inputs
@@ -11311,17 +11339,6 @@ high distances can be flagged as potentially low-quality.")
        ;; Avoid dependency cycle.
        (updater-ignored-native-inputs . ("r-spectra"))))
     (build-system r-build-system)
-    (arguments
-     (list
-      #:phases
-      '(modify-phases %standard-phases
-         ;; This test uses a deprecated procedure that has since been removed
-         ;; from testthat.
-         (add-after 'unpack 'testthat-compatibility
-           (lambda _
-             (substitute* "tests/testthat/test_zzz.R"
-               ((".*.onLoad works.*" m)
-                (string-append m "skip('guix')\n"))))))))
     (propagated-inputs (list r-biocparallel r-mscoreutils))
     (native-inputs (list r-callr r-knitr r-microbenchmark r-robustbase
                          r-testthat))
@@ -11528,13 +11545,13 @@ time-series data (including a graphical user interface).")
 (define-public r-mmuphin
   (package
     (name "r-mmuphin")
-    (version "1.22.0")
+    (version "1.24.0")
     (source
      (origin
        (method url-fetch)
        (uri (bioconductor-uri "MMUPHin" version))
        (sha256
-        (base32 "0d8i9b6pjwz409jd46fm1n9h21hzg8zgzpvchywpyc1k896fvz4l"))
+        (base32 "1zdk9ffa996w4acnhbs7grbji5s3plwhcl6m21yajrlck2i9y3cw"))
        ;; Delete generated files.
        (snippet
         '(for-each delete-file
@@ -14298,13 +14315,13 @@ level.")
 (define-public r-tcgautils
   (package
     (name "r-tcgautils")
-    (version "1.30.2")
+    (version "1.30.3")
     (source (origin
               (method url-fetch)
               (uri (bioconductor-uri "TCGAutils" version))
               (sha256
                (base32
-                "1zwzx7mfp4s0v1rdjsyxj4l9w360g4qm3am8yf5lsd0biciqqh93"))))
+                "1nppp70675y3ds76jf61rhfis2lgkxqjhz48b367qa55g3q2ah61"))))
     (properties `((upstream-name . "TCGAutils")))
     (build-system r-build-system)
     (arguments
@@ -15024,14 +15041,14 @@ unmodeled, or latent sources of noise.")
 (define-public r-systempiper
   (package
     (name "r-systempiper")
-    (version "2.16.3")
+    (version "2.16.4")
     (source
      (origin
        (method url-fetch)
        (uri (bioconductor-uri "systemPipeR" version))
        (sha256
         (base32
-         "0maixi0hwqzkpiq60hf60x4q3gv3hkvmrqh3ygv0fk63g1k9f6cj"))))
+         "1zrk6ky58f30wvaxph5dc2wr418qfpwc7d8pkxpl5dhb5g7vgn8r"))))
     (properties `((upstream-name . "systemPipeR")))
     (build-system r-build-system)
     ;; Tests fail because genWorkenvir fails to set up the environment.
@@ -15398,13 +15415,13 @@ molecular functions, respectively, and produces intuitive graphical outputs.")
 (define-public r-xllim
   (package
     (name "r-xllim")
-    (version "2.3")
+    (version "2.3.1")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "xLLiM" version))
        (sha256
-        (base32 "08v6acn6vpn8asn61ldqdryjz0xk5zyd2v63aqrc5xximpqwrp7d"))))
+        (base32 "1h2z6a3j3yi7rj5lyk7gb1iyp2vf516fgmk7wr333gfkvk522n2r"))))
     (properties `((upstream-name . "xLLiM")))
     (build-system r-build-system)
     (propagated-inputs (list r-abind
@@ -16304,14 +16321,14 @@ signals directly in the Bruker format.")
 (define-public r-codedepends
   (package
     (name "r-codedepends")
-    (version "0.6.6")
+    (version "0.6.7")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "CodeDepends" version))
        (sha256
         (base32
-         "0msq5ksjqp2pjzl6f1vizw53gdf5lz520bpdr5dbjwz5mc1mp0bz"))))
+         "02sj40qxq5vywgqay9q9vpv3s6j3jjr46kc8q3v1yw2vbsmlvrz0"))))
     (properties `((upstream-name . "CodeDepends")))
     (build-system r-build-system)
     (propagated-inputs
@@ -17382,14 +17399,14 @@ data.")
 (define-public r-ggtree
   (package
     (name "r-ggtree")
-    (version "4.0.4")
+    (version "4.0.5")
     (source
      (origin
        (method url-fetch)
        (uri (bioconductor-uri "ggtree" version))
        (sha256
         (base32
-         "1qi5nispv0cirfayijybnn1nr8l6sb2adnic3y37qm3yv91w6s6z"))))
+         "0w9hqc3m35mrdqy5iwcm201pzpbl8jw6rd3wyzwp6f53wbbm2lbh"))))
     (properties `((upstream-name . "ggtree")))
     (build-system r-build-system)
     (propagated-inputs
@@ -18703,13 +18720,13 @@ standardization of the analyses and the development of best practices.")
 (define-public r-microbiomestat
   (package
     (name "r-microbiomestat")
-    (version "1.3")
+    (version "1.4")
     (source (origin
               (method url-fetch)
               (uri (cran-uri "MicrobiomeStat" version))
               (sha256
                (base32
-                "02xg8l4d0z5wrdrm5dj5a0q51vsbhf3f6z2lk8294c4d85s09dhl"))))
+                "0in28lzds3sv1xa25vs8q5mmm1ax78s2axhq7mi23njqip5xmsr1"))))
     (properties
      '((upstream-name . "MicrobiomeStat")
        (updater-extra-inputs . ("nlopt"))
@@ -18717,23 +18734,21 @@ standardization of the analyses and the development of best practices.")
     (build-system r-build-system)
     (inputs (list nlopt))
     (native-inputs (list pkg-config))
-    (propagated-inputs (list r-bbmisc
+    (propagated-inputs (list r-bbotk
                              r-dplyr
                              r-foreach
                              r-ggplot2
                              r-ggrepel
-                             r-lhs
                              r-lmertest
                              r-mass
                              r-matrix
                              r-matrixstats
-                             r-mlr
+                             r-mlr3
-                             r-mlrmbo
+                             r-mlr3mbo
                              r-modeest
-                             r-paramhelpers
+                             r-paradox
                              r-rcpp
                              r-rcpparmadillo
-                             r-smoof
                              r-statmod))
     (home-page "https://cran.r-project.org/package=MicrobiomeStat")
     (synopsis "Statistical methods for microbiome compositional data")
@@ -19637,14 +19652,14 @@ correspondence between different data sources.")
 (define-public r-enrichplot
   (package
     (name "r-enrichplot")
-    (version "1.30.4")
+    (version "1.30.5")
     (source
      (origin
        (method url-fetch)
        (uri (bioconductor-uri "enrichplot" version))
        (sha256
         (base32
-         "080q91ll8rvqf93hcmxc7kjbmmihyh0vrpxck2pqrwglbqxm4xll"))))
+         "12c6xwp29mmalvxp3asliv2hlha5vv8l37prmmcgpdi4nghfic3b"))))
     (build-system r-build-system)
     (propagated-inputs
      (list r-aplot
@@ -22889,14 +22904,14 @@ expression space.")
 (define-public r-cicero
   (package
     (name "r-cicero")
-    (version "1.28.0")
+    (version "1.28.3")
     (source
      (origin
        (method url-fetch)
        (uri (bioconductor-uri "cicero" version))
        (sha256
         (base32
-         "1ibxynw77a8mqv9av7z828wcazjpm4sfp83hd412f2rmgkls895x"))))
+         "016wpficnbricf4f7sgq8j53cl178f1332fh9zvlx7q560489zf1"))))
     (build-system r-build-system)
     (propagated-inputs
      (list r-assertthat
@@ -23528,14 +23543,14 @@ populations, splice site strength, conservation, etc.")
 (define-public r-variancepartition
   (package
     (name "r-variancepartition")
-    (version "1.40.1")
+    (version "1.40.2")
     (source
      (origin
        (method url-fetch)
        (uri (bioconductor-uri "variancePartition" version))
        (sha256
         (base32
-         "1xqy4jl8im7i4kd4iwn8hvhy172fzsadyn90kprihmvccmpd5cr3"))))
+         "0k2rcgg4ll06b9j7999d4l60wpmi3vnjaqiy5ay8ppd1z0m38ygf"))))
     (properties
      '((upstream-name . "variancePartition")
        (updater-extra-native-inputs . ("r-rfast"))))
@@ -23876,30 +23891,26 @@ rate} (FDR).")
 (define-public r-activedriverwgs
   (package
     (name "r-activedriverwgs")
-    (version "1.2.0")
+    (version "1.2.1")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "ActiveDriverWGS" version))
        (sha256
         (base32
-         "0xnplgwxd197a4d422bsxg753q158i12ils16awd1cw30wafdxkk"))))
+         "1v6lnzbaksqpc33q3bp4mwij6rrfbqhi5wk1qx32h2wr2hr4208y"))))
     (properties
      `((upstream-name . "ActiveDriverWGS")))
     (build-system r-build-system)
     (propagated-inputs
      (list r-biostrings
            r-bsgenome
-           r-bsgenome-hsapiens-ucsc-hg19
-           r-bsgenome-hsapiens-ucsc-hg38
-           r-bsgenome-mmusculus-ucsc-mm9
-           r-bsgenome-mmusculus-ucsc-mm10
            r-genomeinfodb
            r-genomicranges
            r-iranges
            r-s4vectors))
     (native-inputs
-     (list r-knitr r-testthat))
+     (list r-bsgenome-hsapiens-ucsc-hg19 r-knitr r-testthat))
     (home-page "https://cran.r-project.org/web/packages/ActiveDriverWGS/")
     (synopsis "Driver discovery tool for cancer whole genomes")
     (description
@@ -24759,13 +24770,13 @@ functionality.")
 (define-public r-biocviews
   (package
     (name "r-biocviews")
-    (version "1.78.0")
+    (version "1.78.1")
     (source (origin
               (method url-fetch)
               (uri (bioconductor-uri "biocViews" version))
               (sha256
                (base32
-                "1dfsfj4dm9wnh4qr1sqdrwzccl3pgw58j17vr3i1bvxkrq31p1ws"))))
+                "1qw3xwsffdqfwpmwrpzg8rnjwv9l45lkjz8bf5272hkhgjc7b1a8"))))
     (properties
      `((upstream-name . "biocViews")))
     (build-system r-build-system)
@@ -24878,14 +24889,14 @@ db and resource files to AWS S3 buckets.")
 (define-public r-multiassayexperiment
   (package
     (name "r-multiassayexperiment")
-    (version "1.36.1")
+    (version "1.36.2")
     (source
      (origin
        (method url-fetch)
        (uri (bioconductor-uri "MultiAssayExperiment" version))
        (sha256
         (base32
-         "09jwnwiq4vx7cmzq5va3rh7npjyhi1p5p344c4n0h9nr55mxzjiw"))))
+         "0bhr51c58vdfvly0bh3hgr397qkq45yw8221rpr38cah7dbzvrba"))))
     (properties
      '((upstream-name . "MultiAssayExperiment")
        (updater-extra-native-inputs
@@ -25954,13 +25965,13 @@ provided for direct creation of an in-memory tatami matrix from a HDF5 file.")
 (define-public r-beadarray
   (package
     (name "r-beadarray")
-    (version "2.58.0")
+    (version "2.60.1")
     (source (origin
               (method url-fetch)
               (uri (bioconductor-uri "beadarray" version))
               (sha256
                (base32
-                "0m9hmy4xn7q2v4ra95b9h08d0qh5qmjgqmg96vabyv46gn5i7qp4"))))
+                "1bcirbg10ai6jpa8a5ppq4450r5h2bwizb98qn0z0hmm1mm4ww9r"))))
     (properties `((upstream-name . "beadarray")))
     (build-system r-build-system)
     (propagated-inputs (list r-annotationdbi
@@ -26390,13 +26401,13 @@ of other packages.")
 (define-public r-scater
   (package
     (name "r-scater")
-    (version "1.38.0")
+    (version "1.38.1")
     (source (origin
               (method url-fetch)
               (uri (bioconductor-uri "scater" version))
               (sha256
                (base32
-                "1qwygk8fg8nharrkmjs65fcl3lsdi232f2383s5j8vm1qil5gghd"))))
+                "1p8dzjphrcqai1f8wh56jfv377dqzdfnx2sl9sn73axbsr41swa7"))))
     (build-system r-build-system)
     (properties
      '((updater-extra-native-inputs
@@ -26501,13 +26512,13 @@ variable and significantly correlated genes.")
 (define-public r-sparsearray
   (package
     (name "r-sparsearray")
-    (version "1.10.8")
+    (version "1.10.10")
     (source
      (origin
        (method url-fetch)
        (uri (bioconductor-uri "SparseArray" version))
        (sha256
-        (base32 "1bjxljwfrv787ikp61xl29wx3k6624qz75gl1kzfif62vys7vgf0"))))
+        (base32 "19c1dfa5wizq7k53a43i5dwwaqs44prclxbf1k0i3awx5wz6qlbw"))))
     (properties `((upstream-name . "SparseArray")))
     (build-system r-build-system)
     (propagated-inputs (list r-biocgenerics
@@ -27161,14 +27172,14 @@ with your data.")
 (define-public r-gwascat
   (package
     (name "r-gwascat")
-    (version "2.42.0")
+    (version "2.42.1")
     (source
      (origin
        (method url-fetch)
        (uri (bioconductor-uri "gwascat" version))
        (sha256
         (base32
-         "1v5z4fmwgs3swvpa09y986sracz0nsggq8s9hp1nmwb9a9grw8px"))))
+         "0djrd63nsqpy46acblg5k8pq6ldqccr35r6h0sf4xridpkqm78b1"))))
     (build-system r-build-system)
     (propagated-inputs
      (list r-annotationdbi
@@ -27183,7 +27194,6 @@ with your data.")
            r-readr
            r-s4vectors
            r-seqinfo
-           r-snpstats
            r-tibble
            r-variantannotation))
     (native-inputs
@@ -27644,16 +27654,6 @@ visualizations for publication-quality multi-panel figures.")
          "1c7vy10ga3cswsqwxljbgqlsjg0d2lx9srfknbjy4fkbyrjci15k"))))
     (properties `((upstream-name . "ballgown")))
     (build-system r-build-system)
-    (arguments
-     (list
-      #:phases
-      '(modify-phases %standard-phases
-         ;; These deprecated procedures have been removed in testthat.
-         (add-after 'unpack 'testthat-compatibility
-           (lambda _
-             (substitute* "tests/testthat/test-annotation.R"
-               (("is_true\\(\\)") "expect_true")
-               (("is_false\\(\\)") "expect_false")))))))
     (propagated-inputs
      (list r-biobase
            r-genomicranges
@@ -28409,28 +28409,18 @@ separate published packages.")
 (define-public r-biomformat
   (package
     (name "r-biomformat")
-    (version "1.38.0")
+    (version "1.38.3")
     (source
      (origin
        (method url-fetch)
        (uri (bioconductor-uri "biomformat" version))
        (sha256
         (base32
-         "1ydcgifdrgg48y7qxg0gw30h332y3yk3k3n17fajkv58mlvyx1yc"))))
+         "0b0w0mfx448ph8fla3nb4i50mvpnv498kxip7rnh14xwas9rhdd7"))))
     (properties `((upstream-name . "biomformat")))
     (build-system r-build-system)
-    (arguments
-     (list
-      #:phases
-      '(modify-phases %standard-phases
-         ;; These deprecated procedures have been removed in testthat.
-         (add-after 'unpack 'testthat-compatibility
-           (lambda _
-             (substitute* "tests/testthat/test-IO.R"
-               (("is_true\\(\\)") "expect_true")
-               (("is_false\\(\\)") "expect_false")))))))
     (propagated-inputs
-     (list r-jsonlite r-matrix r-plyr r-rhdf5))
+     (list r-jsonlite r-matrix r-rhdf5))
     (native-inputs (list r-knitr r-testthat))
     (home-page "https://github.com/joey711/biomformat/")
     (synopsis "Interface package for the BIOM file format")
@@ -29188,25 +29178,15 @@ reproducibility.")
 (define-public r-phyloseq
   (package
     (name "r-phyloseq")
-    (version "1.54.1")
+    (version "1.54.2")
     (source
      (origin
        (method url-fetch)
        (uri (bioconductor-uri "phyloseq" version))
        (sha256
-        (base32 "1zivxag6b2bjh32k1mpn7hlvalap97rp90x3cbfynqrk6933f4bq"))))
+        (base32 "106zwzzwzvb5x0lz9i68wshh2nsa2rf5rmkqjqsvr4smxq6hknlj"))))
     (properties `((upstream-name . "phyloseq")))
     (build-system r-build-system)
-    (arguments
-     (list
-      #:phases
-      '(modify-phases %standard-phases
-         ;; These deprecated procedures have been removed in testthat.
-         (add-after 'unpack 'testthat-compatibility
-           (lambda _
-             (substitute* (find-files "tests/testthat" "\\.R$")
-               (("is_true\\(\\)") "expect_true")
-               (("is_false\\(\\)") "expect_false")))))))
     (propagated-inputs
      (list r-ade4
            r-ape

gnu/packages/bioinformatics.scm

@@ -922,7 +922,10 @@ suite native in R.")
              (commit (string-append "v" version))))
        (file-name (git-file-name name version))
        (sha256
-        (base32 "12h1di45fg06nhsliii7v0h1z567pkpis1xm4ar1qr8ns1n8iljw"))))
+        (base32 "12h1di45fg06nhsliii7v0h1z567pkpis1xm4ar1qr8ns1n8iljw"))
+       (modules '((guix build utils)))
+       (snippet
+        '(delete-file-recursively "r/src/vendor/highway"))))
     (properties `((upstream-name . "BPCells")))
     (build-system r-build-system)
     (arguments
@@ -930,7 +933,11 @@ suite native in R.")
       #:phases
       '(modify-phases %standard-phases
          (add-after 'unpack 'chdir
-           (lambda _ (chdir "r"))))))
+           (lambda _
+             (substitute* "r/configure"
+               (("tools/hwy-test.cpp" m)
+                (string-append m " $HWY_LIBS $HWY_CFLAGS")))
+             (chdir "r"))))))
     (propagated-inputs
      (list r-dplyr
            r-ggplot2
@@ -957,7 +964,7 @@ suite native in R.")
            r-igraph
            r-iranges
            r-matrixstats))
-    (inputs (list hdf5 zlib))
+    (inputs (list hdf5 google-highway zlib))
     (native-inputs (list pkg-config))
     (home-page "https://github.com/bnprks/BPCells")
     (synopsis "Single cell counts matrices to PCA")
@@ -4890,26 +4897,29 @@ relying on a complex dependency tree.")
 (define-public biosoup
   (package
     (name "biosoup")
-    (version "0.10.0")
+    (version "0.11.0")
     (source
      (origin
        (method git-fetch)
        (uri (git-reference
              (url "https://github.com/rvaser/biosoup")
-             ;; Corresponds to version 0.10.0
+             (commit version)))
-             (commit "38181f09854ff42cbd9632200a2ec9fb37a4b7b6")))
        (file-name (git-file-name name version))
        (sha256
         (base32
-         "02hvyka703zagx0nvv2yx3dkc748zc8g6qbrpya7r8kfkcl7y8hw"))))
+         "0vn1hj3h152iwahnrzghqll34qaphchi07klb3j70vgc248micbz"))))
     (build-system cmake-build-system)
     (arguments
-     `(#:phases
+     (list
-       (modify-phases %standard-phases
+      #:phases
-         (replace 'check
+      #~(modify-phases %standard-phases
-           (lambda* (#:key tests? #:allow-other-keys)
+          (add-after 'unpack 'enable-testing
-             (when tests?
+            (lambda _
-               (invoke "./bin/biosoup_test")))))))
+              (substitute* "CMakeLists.txt"
+                (("target_link_libraries\\(biosoup_test")
+                 "enable_testing()
+  add_test(NAME biosoup-test COMMAND biosoup_test)
+  target_link_libraries(biosoup_test")))))))
     (native-inputs
      (list googletest))
     (home-page "https://github.com/rvaser/biosoup")
@@ -4921,26 +4931,29 @@ used for storage and logging in bioinformatics tools.")
 (define-public bioparser
   (package
     (name "bioparser")
-    (version "3.0.13")
+    (version "3.1.0")
     (source
      (origin
        (method git-fetch)
        (uri (git-reference
              (url "https://github.com/rvaser/bioparser")
-             ;; Corresponds to tag 3.0.13
+             (commit version)))
-             (commit "13341e6e0855c6b358ffcea6dad216e1009e1287")))
        (file-name (git-file-name name version))
        (sha256
         (base32
-         "0c5p2dl8jb12ci9f427jzrmmm9cgvc1k4fxsn2ggkfsin6r1r82i"))))
+         "057zb3g8qyvbkbfzgkygrf0iphz3v4icm13pchxzrafiy7zkbmrq"))))
     (build-system cmake-build-system)
     (arguments
-     `(#:phases
+     (list
-       (modify-phases %standard-phases
+      #:phases
-         (replace 'check
+      #~(modify-phases %standard-phases
-           (lambda* (#:key tests? #:allow-other-keys)
+          (add-after 'unpack 'enable-testing
-             (when tests?
+            (lambda _
-               (invoke "./bin/bioparser_test")))))))
+              (substitute* "CMakeLists.txt"
+                (("target_link_libraries\\(bioparser_test")
+                 "enable_testing()
+  add_test(NAME bioparser-test COMMAND bioparser_test)
+  target_link_libraries(bioparser_test")))))))
     (inputs
      (list biosoup))
     (propagated-inputs
@@ -4954,113 +4967,6 @@ bioinformatics formats (FASTA/Q, MHAP/PAF/SAM), with support for zlib
 compressed files.")
     (license license:expat)))
 
-(define-public circtools
-  (package
-    (name "circtools")
-    (version "1.0.0")
-    (source
-     (origin
-       (method git-fetch)
-       (uri (git-reference
-             (url "https://github.com/Kevinzjy/circtools")
-             ;; Corresponds to tag v1.0.0
-             (commit "79380de59013601021ca3b1352d6f64d2fb89646")
-             (recursive? #t)))
-       (file-name (git-file-name name version))
-       (sha256
-        (base32
-         "0wg1s927g32k25j967kfr8l30nmr4c0p4zvy5igvy7cs6chd60lh"))))
-    (build-system cargo-build-system)
-    (arguments
-     `(#:tests? #f
-       #:install-source? #f
-       #:phases
-       (modify-phases %standard-phases
-         (add-after 'unpack 'make-writable
-           (lambda _
-             (for-each make-file-writable (find-files "."))))
-         (add-after 'unpack 'prepare-spoa-dependencies
-           (lambda* (#:key inputs #:allow-other-keys)
-             (substitute* "vendor/spoa/CMakeLists.txt"
-               (("find_package\\(bioparser 3.0.13 QUIET\\)")
-                "find_package(bioparser 3.0.13 CONFIG)")
-               (("find_package\\(biosoup 0.10.0 QUIET\\)")
-                "find_package(biosoup 0.10.0 CONFIG)")
-               (("GTest_FOUND") "TRUE")))))))
-    (inputs
-     (cons* bioparser biosoup (cargo-inputs 'circtools)))
-    (native-inputs
-     (list cmake-minimal pkg-config googletest))
-    (home-page "https://github.com/Kevinzjy/circtools")
-    (synopsis "Accelerating functions in CIRI toolkit")
-    (description "This package provides accelerated functions for the CIRI
-toolkit.  It also provides the @code{ccs} executable to scan for circular
-consensus sequences.")
-    (license license:expat)))
-
-(define-public ciri-long
-  (package
-    (name "ciri-long")
-    (version "1.0.2")
-    (source
-     (origin
-       (method git-fetch)
-       (uri (git-reference
-             (url "https://github.com/bioinfo-biols/CIRI-long")
-             (commit (string-append "v" version))))
-       (file-name (git-file-name name version))
-       (sha256
-        (base32 "10k88i1fcqchrrjv82rmylwvbwqfba0n51palhig9hsg71xs0dbi"))
-       ;; Delete bundled binary
-       (snippet '(delete-file "libs/ccs"))))
-    (build-system pyproject-build-system)
-    (arguments
-     (list
-      #:phases
-      #~(modify-phases %standard-phases
-          (add-after 'unpack 'relax-requirements
-            (lambda _
-              (substitute* "setup.py"
-                (("'argparse[^']*',")
-                 "") ;only for python2
-                (("==")
-                 ">=")
-                ;; This package changed names.
-                (("python-Levenshtein")
-                 "levenshtein"))))
-          (add-before 'build 'build-libssw
-            (lambda _
-              (with-directory-excursion "libs/striped_smith_waterman"
-                (invoke "make" "libssw.so"))))
-          (add-before 'build 'fix-reference-to-ccs
-            (lambda* (#:key inputs #:allow-other-keys)
-              (substitute* "CIRI_long/pipeline.py"
-                (("'ccs -i")
-                 (string-append "'"
-                                (assoc-ref inputs "circtools") "/bin/ccs"
-                                " -i")))
-              ;; yuck!
-              (substitute* "CIRI_long/main.py"
-                (("os.chmod\\(lib_path.*")
-                 "")))))))
-    (inputs (list circtools
-                  python-biopython
-                  python-bwapy
-                  python-levenshtein
-                  python-mappy
-                  python-numpy
-                  python-pandas
-                  python-pysam
-                  python-pyspoa
-                  python-scikit-learn
-                  python-scipy))
-    (native-inputs (list python-cython python-pynose python-setuptools))
-    (home-page "https://ciri-cookbook.readthedocs.io/")
-    (synopsis "Circular RNA identification for Nanopore sequencing")
-    (description "CIRI-long is a package for circular RNA identification using
-long-read sequencing data.")
-    (license license:expat)))
-
 (define-public python-circe
   (package
     (name "python-circe")
@@ -7168,14 +7074,16 @@ CWL descriptions.")
   (package
     (name "ravanan")
     (version "0.2.0")
-    (source (origin
+    (source
-              (method url-fetch)
+     (origin
-              (uri (string-append
+       (method git-fetch)
-                    "https://github.com/arunisaac/ravanan/releases/download/v"
+       (uri (git-reference
-                    version "/ravanan-" version ".tar.lz"))
+              (url "https://github.com/arunisaac/ravanan")
-              (sha256
+              (commit (string-append "v" version))))
-               (base32
+       (file-name (git-file-name name version))
-                "00ayvxsgvma3231ja1759f5fr99a4nw3j23i8qz616wfxa54745s"))))
+       (sha256
+        (base32
+         "1ap9h2d92wjvnn8914baqkx6xn8zdanxmpjfg81v3qx35pn938al"))))
     (arguments
      (list #:make-flags
            #~(list (string-append "prefix=" #$output)
@@ -7209,7 +7117,7 @@ CWL descriptions.")
     (inputs
      (list bash-minimal
            node
-           guile-3.0
+           (lookup-package-input guix "guile")
            guile-filesystem
            guile-gcrypt
            guile-json-4
@@ -7328,7 +7236,7 @@ genome- and pangenome-scale queries using a laptop.")
 (define-public delly
   (package
     (name "delly")
-    (version "0.8.3")
+    (version "1.7.3")
     (source (origin
               (method git-fetch)
               (uri (git-reference
@@ -7336,7 +7244,7 @@ genome- and pangenome-scale queries using a laptop.")
                     (commit (string-append "v" version))))
               (file-name (git-file-name name version))
               (sha256
-               (base32 "1ibnplgfzj96w8glkx17v7sld3pm402fr5ybmf3h0rlcryabxrqy"))
+               (base32 "1ri7m7iv3wakm7zdwqdzm5m71y0swad9n78dzrzr9gs3j7j5yxjs"))
               (modules '((guix build utils)))
               (snippet
                '(delete-file-recursively "src/htslib"))))
@@ -9375,7 +9283,7 @@ VCF.")
        ;; [testng] Exception in thread "main" java.lang.NoClassDefFoundError: com/beust/jcommander/ParameterException
        #:tests? #f
        #:jdk ,icedtea-8
-       #:ant ,ant/java8
+       #:ant ,ant
        ;; This is only used for tests.
        #:make-flags
        (list "-Dsamjdk.intel_deflater_so_path=lib/jni/libIntelDeflater.so")
@@ -9445,11 +9353,10 @@ VCF.")
      (list java-snappy-1
            java-commons-jexl-2
            java-cofoja
-           ant/java8                    ;for bzip2 support at runtime
+           ant                          ;for bzip2 support at runtime
            zlib))
     (native-inputs
      `(("ant-apache-bcel" ,ant-apache-bcel)
-       ("ant-junit" ,ant-junit)
        ("java-testng" ,java-testng)
        ("java-commons-bcel" ,java-commons-bcel)
        ("java-jcommander" ,java-jcommander)
@@ -13208,28 +13115,22 @@ differently labelled data.")
 (define-public r-pando
   (package
     (name "r-pando")
-    (version "1.0.5")
+    (version "1.1.1")
     (source
      (origin
        (method git-fetch)
        (uri (git-reference
-             (url "https://github.com/quadbiolab/Pando")
+              (url "https://github.com/quadbio/Pando")
-             (commit (string-append "v" version))))
+              (commit (string-append "v" version))))
        (file-name (git-file-name name version))
        (sha256
-        (base32 "04kr1b28p5j7h48g32cldkg87xcmxnmd4kspygkfs7a4amihpi66"))))
+        (base32 "1zcsg3my1ka2wprvlx8p08cdz3dqphga54d5rp418zfhcyjy4fkp"))))
     (properties `((upstream-name . "Pando")))
     (build-system r-build-system)
     (arguments
      (list
       ;; The test file data/test_seurat.rds is not included.
-      #:tests? #false
+      #:tests? #false))
-      #:phases
-      '(modify-phases %standard-phases
-         (add-after 'unpack 'loosen-requirements
-           (lambda _
-             (substitute* "DESCRIPTION"
-               ((" \\(==.*,") ",")))))))
     (propagated-inputs
      (list r-bayestestr
            r-foreach
@@ -18433,44 +18334,6 @@ following the assay and produces a file detailing peaks of significant
 enrichment.")
     (license license:expat)))
 
-(define-public mantis
-  ;; This is an arbitrary commit as a year has passed since 0.1 was tagged.
-  (let ((commit "b6979a269172a45201c8366680d8b889f889432b")
-        (revision "2"))
-    (package
-      (name "mantis")
-      (version (git-version "0.1" revision commit))
-      (source (origin
-                (method git-fetch)
-                (uri (git-reference
-                      (url "https://github.com/splatlab/mantis")
-                      (commit commit)))
-                (file-name (git-file-name name version))
-                (sha256
-                 (base32
-                  "0dq8a785hnaxx5kq757m5czs8xpcjpcph1inq2nm8h6zfvqyj8xs"))))
-      (build-system cmake-build-system)
-      (arguments
-       '(#:tests? #f ; there are none
-         #:configure-flags (list "-DNH=ON"))) ; do not use SSE4.2 instructions
-      (inputs
-       (list sdsl-lite openssl zlib))
-      (native-inputs
-       (list gcc-7))
-      (home-page "https://github.com/splatlab/mantis")
-      (synopsis "Large-scale sequence-search index data structure")
-      (description "Mantis is a space-efficient data structure that can be
-used to index thousands of raw-read genomics experiments and facilitate
-large-scale sequence searches on those experiments.  Mantis uses counting
-quotient filters instead of Bloom filters, enabling rapid index builds and
-queries, small indexes, and exact results, i.e., no false positives or
-negatives.  Furthermore, Mantis is also a colored de Bruijn graph
-representation, so it supports fast graph traversal and other topological
-analyses in addition to large-scale sequence-level searches.")
-      ;; uses __uint128_t and inline assembly
-      (supported-systems '("x86_64-linux"))
-      (license license:bsd-3))))
-
 (define-public sjcount
   ;; There is no tag for version 3.2, nor is there a release archive.
   (let ((commit "292d3917cadb3f6834c81e509c30e61cd7ead6e5")

gnu/packages/bittorrent.scm

@@ -41,32 +41,16 @@
 ;;; along with GNU Guix.  If not, see <http://www.gnu.org/licenses/>.
 
 (define-module (gnu packages bittorrent)
-  #:use-module (guix packages)
-  #:use-module (guix download)
-  #:use-module (guix git-download)
-  #:use-module (guix build-system cmake)
-  #:use-module (guix build-system gnu)
-  #:use-module (guix build-system meson)
-  #:use-module (guix build-system pyproject)
-  #:use-module (guix build-system python)
-  #:use-module (guix build-system qt)
-  #:use-module (guix build-system glib-or-gtk)
-  #:use-module ((guix licenses) #:prefix l:)
-  #:use-module (guix gexp)
-  #:use-module (guix utils)
-  #:use-module ((guix search-paths) #:select ($SSL_CERT_DIR $SSL_CERT_FILE))
-  #:use-module (gnu packages)
-  #:use-module (gnu packages adns)
   #:use-module (gnu packages autotools)
   #:use-module (gnu packages bash)
   #:use-module (gnu packages boost)
-  #:use-module (gnu packages nss)
   #:use-module (gnu packages check)
   #:use-module (gnu packages cmake)
   #:use-module (gnu packages compression)
   #:use-module (gnu packages crypto)
   #:use-module (gnu packages curl)
   #:use-module (gnu packages cyrus-sasl)
+  #:use-module (gnu packages dns)
   #:use-module (gnu packages freedesktop)
   #:use-module (gnu packages gettext)
   #:use-module (gnu packages glib)
@@ -76,8 +60,9 @@
   #:use-module (gnu packages gtk)
   #:use-module (gnu packages libevent)
   #:use-module (gnu packages multiprecision)
-  #:use-module (gnu packages nettle)
   #:use-module (gnu packages ncurses)
+  #:use-module (gnu packages nettle)
+  #:use-module (gnu packages nss)
   #:use-module (gnu packages perl)
   #:use-module (gnu packages pkg-config)
   #:use-module (gnu packages python)
@@ -86,15 +71,30 @@
   #:use-module (gnu packages python-crypto)
   #:use-module (gnu packages python-web)
   #:use-module (gnu packages python-xyz)
-  #:use-module (gnu packages serialization)
   #:use-module (gnu packages qt)
+  #:use-module (gnu packages serialization)
   #:use-module (gnu packages sqlite)
   #:use-module (gnu packages ssh)
   #:use-module (gnu packages tls)
   #:use-module (gnu packages version-control)
   #:use-module (gnu packages web)
   #:use-module (gnu packages xml)
-  #:use-module (gnu packages xorg))
+  #:use-module (gnu packages xorg)
+  #:use-module (gnu packages)
+  #:use-module (guix build-system cmake)
+  #:use-module (guix build-system glib-or-gtk)
+  #:use-module (guix build-system gnu)
+  #:use-module (guix build-system meson)
+  #:use-module (guix build-system pyproject)
+  #:use-module (guix build-system python)
+  #:use-module (guix build-system qt)
+  #:use-module (guix download)
+  #:use-module (guix gexp)
+  #:use-module (guix git-download)
+  #:use-module ((guix licenses) #:prefix license:)
+  #:use-module (guix packages)
+  #:use-module ((guix search-paths) #:select ($SSL_CERT_DIR $SSL_CERT_FILE))
+  #:use-module (guix utils))
 
 (define-public transmission
   (package
@@ -194,7 +194,7 @@ DHT, µTP, PEX and Magnet Links.")
     ;; or any future license endorsed by Mnemosyne LLC.
     ;;
     ;; A few files files carry an MIT/X11 license header.
-    (license (list l:gpl2 l:gpl3))))
+    (license (list license:gpl2 license:gpl3))))
 
 (define-public transmission-remote-gtk
   (package
@@ -224,7 +224,7 @@ DHT, µTP, PEX and Magnet Links.")
     (description "transmission-remote-gtk is a GTK client for remote management
 of the Transmission BitTorrent client, using its HTTP RPC protocol.")
     (home-page "https://github.com/transmission-remote-gtk/transmission-remote-gtk")
-    (license l:gpl2+)))
+    (license license:gpl2+)))
 
 (define-public stig
   (package
@@ -267,7 +267,7 @@ of the Transmission BitTorrent client, using its HTTP RPC protocol.")
      "Stig is a @acronym{TUI, Text User Interface} and @acronym{CLI, Command
 Line Interface} client for the BitTorrent client Transmission.")
     (home-page "https://github.com/rndusr/stig")
-    (license l:gpl3)))
+    (license license:gpl3)))
 
 (define-public libtorrent
   (package
@@ -291,7 +291,7 @@ Line Interface} client for the BitTorrent client Transmission.")
 with the BitTorrent client rtorrent.  It is written in C++ with emphasis on
 speed and efficiency.")
     (home-page "https://github.com/rakshasa/libtorrent")
-    (license l:gpl2+)))
+    (license license:gpl2+)))
 
 (define-public rtorrent
   (package
@@ -320,7 +320,7 @@ speed and efficiency.")
 full encryption, DHT, PEX, and Magnet Links.  It can also be controlled via
 XML-RPC over SCGI.")
     (home-page "https://github.com/rakshasa/rtorrent")
-    (license l:gpl2+)))
+    (license license:gpl2+)))
 
 (define-public tremc
   (let ((commit "d8deaa5ac25bb45a2ca3a930309d6ecc74836a54")
@@ -354,7 +354,7 @@ XML-RPC over SCGI.")
     (description "Tremc is a console client, with a curses interface, for the
 Transmission BitTorrent daemon.")
     (home-page "https://github.com/tremc/tremc")
-    (license l:gpl3+))))
+    (license license:gpl3+))))
 
 (define-public aria2
   (package
@@ -419,7 +419,7 @@ download utility.  It supports HTTP/HTTPS, FTP, SFTP, BitTorrent and Metalink.
 Aria2 can be manipulated via built-in JSON-RPC and XML-RPC interfaces.")
     (properties
      '((release-monitoring-url . "https://github.com/aria2/aria2/releases")))
-    (license l:gpl2+)))
+    (license license:gpl2+)))
 
 (define-public uget
   (package
@@ -453,7 +453,7 @@ Aria2 can be manipulated via built-in JSON-RPC and XML-RPC interfaces.")
      "uGet is portable download manager with GTK+ interface supporting
 HTTP, HTTPS, BitTorrent and Metalink, supporting multi-connection
 downloads, download scheduling, download rate limiting.")
-    (license l:lgpl2.1+)))
+    (license license:lgpl2.1+)))
 
 (define-public mktorrent
   (package
@@ -488,8 +488,8 @@ files and whole directories.  It can add multiple trackers and web seed URLs,
 and set the @code{private} flag to disallow advertisement through the
 distributed hash table (@dfn{DHT}) and Peer Exchange.  Hashing is multi-threaded
 and will take advantage of multiple processor cores where possible.")
-    (license (list l:public-domain      ; sha1.*, used to build without OpenSSL
+    (license (list license:public-domain ; sha1.*, used to build without OpenSSL
-                   l:gpl2+))))          ; with permission to link with OpenSSL
+                   license:gpl2+))))     ; with permission to link with OpenSSL
 
 (define-public libtorrent-rasterbar
   (package
@@ -541,7 +541,7 @@ and will take advantage of multiple processor cores where possible.")
      "libtorrent-rasterbar is a feature-complete C++ BitTorrent implementation
 focusing on efficiency and scalability.  It runs on embedded devices as well as
 desktops.")
-    (license l:bsd-2)))
+    (license license:bsd-2)))
 
 (define-public qbittorrent
   (package
@@ -585,7 +585,7 @@ libtorrent (sometimes called libtorrent-rasterbar) by Arvid Norberg.
 It aims to be a good alternative to all other BitTorrent clients out there.
 qBittorrent is fast, stable and provides unicode support as well as many
 features.")
-    (license l:gpl2+)))
+    (license license:gpl2+)))
 
 (define-public qbittorrent-no-x
   (let ((base qbittorrent))
@@ -727,4 +727,4 @@ Protocol Encryption, DHT, Local Peer Discovery (LSD), Peer Exchange
 speed limits.  Deluge heavily utilises the ​libtorrent library.  It is
 designed to run as both a normal standalone desktop application and as a
 ​client-server.")
-    (license l:gpl3+)))
+    (license license:gpl3+)))

gnu/packages/browser-extensions.scm

@@ -95,8 +95,8 @@ supported content to the Kodi media center.")
   ;; Arbitrary commit of branch master,
   ;; Update when updating uBlockOrigin.
   (let* ((name "ublock-main-assets")
-         (commit "011eef4a5b36a7ebf4adedc486d96b77cfa25c54")
+         (commit "004af606e6a0efc22bc65ab1016b553441cacb71")
-         (revision "5")
+         (revision "6")
          (version (git-version "0" revision commit)))
     (origin
       (method git-fetch)
@@ -105,14 +105,14 @@ supported content to the Kodi media center.")
             (commit commit)))
       (file-name (git-file-name name version))
       (sha256
-       (base32 "0ng8a88zdvrxg30fz83gswjy27b3hfx9q11n2i715id7az7kqf9x")))))
+       (base32 "1bfd2d53flrkgvjcr1kj9nbxj4y9a4pcr7m3dycccdhd21x6k0ln")))))
 
 (define ublock-prod-assets
   ;; Arbitrary commit of branch gh-pages,
   ;; Update when updating uBlockOrigin.
   (let* ((name "ublock-prod-assets")
-         (commit "6844322800de647da0c4fe06dd6a0b212a3942e4")
+         (commit "6c15e4ef91888c610caf73829dc78ae9549ed24a")
-         (revision "5")
+         (revision "6")
          (version (git-version "0" revision commit)))
     (origin
       (method git-fetch)
@@ -121,12 +121,12 @@ supported content to the Kodi media center.")
             (commit commit)))
       (file-name (git-file-name name version))
       (sha256
-       (base32 "13vxq4z1wxivz5xklncxd2sj5aqkyhq919vzbbfp0fgh0imhikib")))))
+       (base32 "0n2h6drqh44b1zgl729bfr70n08mkm536a2vqgivw7dm5dmi8zd3")))))
 
 (define ublock-origin
   (package
     (name "ublock-origin")
-    (version "1.66.2")
+    (version "1.70.0")
     (home-page "https://github.com/gorhill/uBlock")
     (source (origin
               (method git-fetch)
@@ -136,7 +136,7 @@ supported content to the Kodi media center.")
               (file-name (git-file-name name version))
               (sha256
                (base32
-                "16ph031hb8bf4rxyxvm6jr0bxmy0snza11jfrbjgfb390gax9r63"))))
+                "0j1m80nz86yc69c42hv5di5zza0vkycqmjaydb9jgx0abcvi19x5"))))
     (build-system gnu-build-system)
     (outputs '("xpi" "firefox" "chromium"))
     (properties '((addon-id . "uBlock0@raymondhill.net")))

gnu/packages/build-tools.scm

@@ -26,6 +26,7 @@
 ;;; Copyright © 2025 Josep Bigorra <jjbigorra@gmail.com>
 ;;; Copyright © 2025 John Kehayias <john.kehayias@protonmail.com>
 ;;; Copyright © 2026 Nemin <bergengocia@protonmail.com>
+;;; Copyright © 2026 Nguyễn Gia Phong <cnx@loang.net>
 ;;;
 ;;; This file is part of GNU Guix.
 ;;;
@@ -43,37 +44,17 @@
 ;;; along with GNU Guix.  If not, see <http://www.gnu.org/licenses/>.
 
 (define-module (gnu packages build-tools)
-  #:use-module (ice-9 optargs)
-  #:use-module ((guix licenses) #:prefix license:)
-  #:use-module (gnu packages c)
-  #:use-module (guix build-system cmake)
-  #:use-module (guix build-system copy)
-  #:use-module (guix build-system gnu)
-  #:use-module (guix build-system guile)
-  #:use-module (guix build-system hare)
-  #:use-module (guix build-system meson)
-  #:use-module (guix build-system pyproject)
-  #:use-module (guix build-system python)
-  #:use-module (guix build-system trivial)
-  #:use-module (guix deprecation)
-  #:use-module (guix download)
-  #:use-module (guix gexp)
-  #:use-module (guix git-download)
-  #:use-module (guix modules)
-  #:use-module (guix packages)
-  #:use-module (guix search-paths)
-  #:use-module (guix utils)
-  #:use-module (gnu packages)
-  #:use-module (gnu packages adns)
   #:use-module (gnu packages algebra)
   #:use-module (gnu packages autotools)
   #:use-module (gnu packages base)
   #:use-module (gnu packages bash)
+  #:use-module (gnu packages c)
   #:use-module (gnu packages check)
   #:use-module (gnu packages code)
   #:use-module (gnu packages compression)
   #:use-module (gnu packages cpp)
   #:use-module (gnu packages cppi)
+  #:use-module (gnu packages dns)
   #:use-module (gnu packages elf)
   #:use-module (gnu packages gcc)
   #:use-module (gnu packages guile)
@@ -100,10 +81,31 @@
   #:use-module (gnu packages rpc)
   #:use-module (gnu packages serialization)
   #:use-module (gnu packages sqlite)
+  #:use-module (gnu packages tcl)
   #:use-module (gnu packages tls)
   #:use-module (gnu packages unicode)
   #:use-module (gnu packages version-control)
-  #:use-module (gnu packages xml))
+  #:use-module (gnu packages xml)
+  #:use-module (gnu packages)
+  #:use-module (guix build-system cmake)
+  #:use-module (guix build-system copy)
+  #:use-module (guix build-system gnu)
+  #:use-module (guix build-system guile)
+  #:use-module (guix build-system hare)
+  #:use-module (guix build-system meson)
+  #:use-module (guix build-system pyproject)
+  #:use-module (guix build-system python)
+  #:use-module (guix build-system trivial)
+  #:use-module (guix deprecation)
+  #:use-module (guix download)
+  #:use-module (guix gexp)
+  #:use-module (guix git-download)
+  #:use-module ((guix licenses) #:prefix license:)
+  #:use-module (guix modules)
+  #:use-module (guix packages)
+  #:use-module (guix search-paths)
+  #:use-module (guix utils)
+  #:use-module (ice-9 optargs))
 
 (define-public acr
   (package
@@ -139,6 +141,48 @@ Bourne shell script instead of m4.")
     (home-page "https://github.com/radareorg/acr")
     (license license:gpl2)))
 
+(define-public autosetup
+  (package
+    (name "autosetup")
+    (version "0.7.2")
+    (source
+     (origin
+       (method git-fetch)
+       (uri (git-reference
+             (url "https://github.com/msteveb/autosetup")
+             (commit (string-append "v" version))))
+       (file-name (git-file-name name version))
+       (sha256 (base32 "002b380073cpxlqziia2gvngywrb37b08p9k0zk9vlxn2p174hc6"))
+       (modules '((guix build utils)))
+       (snippet
+        #~(begin
+            (delete-file "jimsh0.c")
+            (substitute* "Makefile"
+              (("^.*tclsh8\\..*")       ;tests run with specific Tcl versions
+               ""))))))
+    (build-system gnu-build-system)
+    (arguments
+     (list #:test-target "test"
+           #:phases
+           #~(modify-phases %standard-phases
+               (delete 'configure)
+               (delete 'build)
+               (replace 'install
+                 (lambda* (#:key inputs #:allow-other-keys)
+                   (substitute* "sys-find-tclsh"
+                     (("jimsh tclsh")
+                      (search-input-file inputs "bin/tclsh")))
+                   (invoke "tclsh" "autosetup"
+                           (string-append "--sysinstall=" #$output)))))))
+    (inputs (list tcl))
+    (home-page "https://msteveb.github.io/autosetup/")
+    (synopsis "Build environment auto-configurator")
+    (description
+     "@command{autosetup} is a tool, similar to @command{autoconf},
+to configure a build system for the appropriate environment,
+according to the system capabilities and the user-selected options.")
+    (license license:bsd-2)))
+
 (define-public bam
   (package
     (name "bam")
@@ -152,7 +196,8 @@ Bourne shell script instead of m4.")
               (file-name (git-file-name name version))
               (sha256
                (base32
-                "13br735ig7lygvzyfd15fc2rdygrqm503j6xj5xkrl1r7w2wipq6"))))
+                "13br735ig7lygvzyfd15fc2rdygrqm503j6xj5xkrl1r7w2wipq6"))
+              (patches (search-patches "bam-python3-compat.patch"))))
     (build-system gnu-build-system)
     (arguments
      `(#:make-flags `(,(string-append "CC=" ,(cc-for-target))
@@ -163,7 +208,7 @@ Bourne shell script instead of m4.")
        (modify-phases %standard-phases
          (delete 'configure))))
     (native-inputs
-     `(("python" ,python-2)))
+     (list python-minimal-wrapper))
     (inputs
      (list lua))
     (home-page "https://matricks.github.io/bam/")
@@ -300,8 +345,8 @@ programs and other files depend.")
     (license license:bsd-3)))
 
 (define-public gn
-  (let ((commit "ee5b7e32b961a9da1933e9f46a018ba6cac8ef60")
+  (let ((commit "6e8dcdebbadf4f8aa75e6a4b6e0bdf89dce1513a")
-        (revision "2277"))            ;as returned by `git describe`, used below
+        (revision "2354"))            ;as returned by `git describe`, used below
     (package
       (name "gn")
       (version (git-version "0.0" revision commit))
@@ -311,7 +356,7 @@ programs and other files depend.")
                 (uri (git-reference (url home-page) (commit commit)))
                 (sha256
                  (base32
-                  "19kkvwxl66vlzlfppbq03fmi59i5g8a1yc71fsfgwqqmx4wywd6w"))
+                  "0yz38czmbc72q1hkiv3cwxqh2i8ji2vkkvvk5ws2cjplmn2vj0x9"))
                 (file-name (git-file-name name version))))
       (build-system gnu-build-system)
       (arguments
@@ -321,7 +366,8 @@ programs and other files depend.")
                    (lambda _
                      (setenv "CC" "gcc")
                      (setenv "CXX" "g++")
-                     (setenv "CXXFLAGS" "-g -O2 -Wno-error=redundant-move")
+                     (setenv "CXXFLAGS"
+                             "-g -O2 -Wno-error=redundant-move -Wno-error=comment")
                      (setenv "AR" "ar")))
                  (replace 'configure
                    (lambda _

gnu/packages/cdrom.scm

@@ -595,7 +595,11 @@ capacity is user-selectable.")
                             version "/DVDStyler-" version ".tar.bz2"))
        (sha256
         (base32
-         "0n3mfjsazvlzk9hl23q3iz7bmxjq7b5lx0ab8nbk1jgl763k9cqb"))))
+         "0n3mfjsazvlzk9hl23q3iz7bmxjq7b5lx0ab8nbk1jgl763k9cqb"))
+       (snippet
+        #~(begin (delete-file "src/dvdvml.c")
+                 (delete-file "src/dvdvmy.c")
+                 (delete-file "src/dvdvmy.h")))))
     (build-system gnu-build-system)
     (arguments
      `(#:configure-flags
@@ -625,27 +629,28 @@ capacity is user-selectable.")
              #t)))
        #:tests? #f)) ; No tests.
     (inputs ; TODO package bundled wxvillalib
-     `(("wxwidgets" ,wxwidgets)
+     (list bash-minimal ; for wrap-program
-       ("wssvg" ,wxsvg)
+           cdrtools
-       ("bash" ,bash-minimal) ; for wrap-program
+           dbus
-       ("dbus" ,dbus)
+           dvd+rw-tools
-       ("cdrtools" ,cdrtools)
+           dvdauthor
-       ("dvd+rw-tools" ,dvd+rw-tools)
+           eudev
-       ("dvdauthor" ,dvdauthor)
+           ffmpeg-4
-       ("eudev" ,eudev)
+           fontconfig
-       ("fontconfig" ,fontconfig)
+           libexif
-       ("libexif" ,libexif)
+           libjpeg-turbo
-       ("libjpeg" ,libjpeg-turbo)
+           wxsvg
-       ("ffmpeg" ,ffmpeg-4)))
+           wxwidgets))
     (native-inputs
-     `(("pkg-config" ,pkg-config)
+     (list bison
-       ("flex" ,flex)
+           docbook-xml
-       ("python" ,python-2)
+           docbook-xsl
-       ("xmlto" ,xmlto)
+           flex
-       ("gettext" ,gettext-minimal)
+           gettext-minimal
-       ("docbook-xml" ,docbook-xml)
+           pkg-config
-       ("docbook-xsl" ,docbook-xsl)
+           python-minimal-wrapper
-       ("zip" ,zip)))
+           xmlto
+           zip))
     (synopsis "DVD authoring application")
     (description "DVDStyler is a DVD authoring application which allows users
 to burn video files in many formats to DVD discs, complete with individually

gnu/packages/chromium.scm

@@ -79,11 +79,13 @@
   '("base/third_party/cityhash" ;Expat
     "base/third_party/double_conversion" ;BSD-3
     "base/third_party/icu" ;Unicode, X11-style
+    "base/third_party/nspr" ;MPL-2.0
     "base/third_party/superfasthash" ;BSD-3
     "base/third_party/symbolize" ;BSD-3
     "base/third_party/xdg_user_dirs" ;Expat
+    "buildtools/third_party/libc++" ;BSD
+    "buildtools/third_party/libc++abi" ;BSD
     "net/third_party/mozilla_security_manager" ;MPL-1.1/GPL2+/LGPL2.1+
-    "net/third_party/nss" ;MPL-2.0
     "net/third_party/quiche" ;BSD-3
     "net/third_party/uri_template" ;ASL2.0
     "third_party/abseil-cpp" ;ASL2.0
@@ -104,8 +106,11 @@
     "third_party/catapult" ;BSD-3
     "third_party/catapult/common/py_vulcanize/third_party/rcssmin" ;ASL2.0
     "third_party/catapult/common/py_vulcanize/third_party/rjsmin" ;ASL2.0
+    "third_party/catapult/third_party/beautifulsoup4-4.9.3" ;Expat
+    "third_party/catapult/third_party/html5lib-1.1" ;Expat
     "third_party/catapult/third_party/polymer" ;BSD-3
     "third_party/catapult/third_party/six" ;Expat
+    "third_party/catapult/third_party/typ" ;ASL2.0
     ;; XXX: This is a minified version of <https://d3js.org/>.
     "third_party/catapult/tracing/third_party/d3" ;BSD-3
     "third_party/catapult/tracing/third_party/gl-matrix" ;Expat
@@ -120,19 +125,12 @@
     "third_party/cld_3" ;ASL2.0
     "third_party/closure_compiler" ;ASL2.0
     "third_party/compiler-rt" ;ASL2.0
-    "third_party/compiler-rt/src/lib" ;ASL2.0
-    "third_party/compiler-rt/src/lib/builtins" ;ASL2.0
     "third_party/content_analysis_sdk" ;BSD-3
     "third_party/cpuinfo" ;BSD-2
     "third_party/crabbyavif" ;ASL2.0
-    "third_party/crabbyavif/src/sys/dav1d-sys" ;ASL2.0
-    "third_party/crabbyavif/src/sys/aom-sys" ;ASL2.0
-    "third_party/crabbyavif/src/sys/libgav1-sys" ;ASL2.0
-    "third_party/crabbyavif/src/sys/libyuv-sys" ;ASL2.0
-    "third_party/crabbyavif/src/sys/ndk-sys" ;ASL2.0
     "third_party/crashpad" ;ASL2.0
     "third_party/crashpad/crashpad/third_party/lss" ;ASL2.0
-    "third_party/crashpad/crashpad/third_party/zlib/zlib_crashpad.h" ;Zlib
+    "third_party/crashpad/crashpad/third_party/zlib" ;Zlib
     "third_party/crc32c" ;BSD-3
     "third_party/cros_system_api" ;BSD-3
     "third_party/dav1d" ;BSD-2
@@ -140,19 +138,25 @@
     ;; TODO: can likely be unbundled when Vulkan is updated.
     "third_party/dawn/third_party/khronos" ;ASL2.0
     "third_party/dawn/third_party/gn/webgpu-cts" ;BSD-3
+    "third_party/dawn/third_party/renderdoc" ;Expat
+    "third_party/dawn/third_party/webgpu-headers" ;BSD-3
+    "third_party/depot_tools" ;BSD-3
+    "third_party/devscripts" ;GPL2.0
     "third_party/devtools-frontend" ;BSD-3
     "third_party/devtools-frontend/src/front_end"
     "third_party/devtools-frontend/src/front_end/third_party"
     "third_party/devtools-frontend/src/front_end/third_party/acorn" ;Expat
     "third_party/devtools-frontend/src/front_end/third_party\
 /additional_readme_paths.json" ;no explicit license; trivial
-    "third_party/devtools-frontend/src/front_end/third_party/json5" ;Expat
     "third_party/devtools-frontend/src/front_end/third_party/axe-core" ;MPL2.0
     "third_party/devtools-frontend/src/front_end/third_party/chromium" ;BSD-3
     "third_party/devtools-frontend/src/front_end/third_party/codemirror" ;Expat
+    "third_party/devtools-frontend/src/front_end/third_party/csp_evaluator" ;BSD-3
     "third_party/devtools-frontend/src/front_end/third_party/diff" ;ASL2.0
     "third_party/devtools-frontend/src/front_end/third_party/i18n" ;ASL2.0
     "third_party/devtools-frontend/src/front_end/third_party/intl-messageformat" ;BSD-3
+    "third_party/devtools-frontend/src/front_end/third_party/json5" ;Expat
+    "third_party/devtools-frontend/src/front_end/third_party/legacy-javascript" ;ASL-2.0
     "third_party/devtools-frontend/src/front_end/third_party/lighthouse" ;ASL2.0
     "third_party/devtools-frontend/src/front_end/third_party/lit" ;BSD-3
     "third_party/devtools-frontend/src/front_end/third_party/marked" ;Expat, BSD-3
@@ -164,10 +168,12 @@
     "third_party/devtools-frontend/src/front_end/third_party/puppeteer/third_party/parsel" ; Expat
     "third_party/devtools-frontend/src/front_end/third_party/puppeteer/third_party/rxjs" ; ASL2.0
     "third_party/devtools-frontend/src/front_end/third_party/puppeteer-replay" ;ASL2.0
+    "third_party/devtools-frontend/src/front_end/third_party/source-map-scopes-codec" ;BSD-3
     "third_party/devtools-frontend/src/front_end/third_party\
 /vscode.web-custom-data" ;Expat
     "third_party/devtools-frontend/src/front_end/third_party/third-party-web" ;Expat
     "third_party/devtools-frontend/src/front_end/third_party/wasmparser" ;ASL2.0
+    "third_party/devtools-frontend/src/front_end/third_party/web-vitals" ;Expat
     "third_party/devtools-frontend/src/third_party/i18n" ;ASL2.0
     "third_party/devtools-frontend/src/third_party/pyjson5" ;ASL2.0
 
@@ -179,6 +185,7 @@
     "third_party/farmhash" ;Expat
     "third_party/fast_float" ;ASL2.0, Boost1.0, Expat
     "third_party/fdlibm" ;non-copyleft
+    "third_party/federated_compute/chromium/fcp/confidentialcompute" ;ASL2.0
     "third_party/federated_compute/src/fcp/base" ;ASL2.0
     "third_party/federated_compute/src/fcp/confidentialcompute" ;ASL2.0
     "third_party/federated_compute/src/fcp/protos/confidentialcompute" ;ASL2.0
@@ -187,7 +194,9 @@
     "third_party/fft2d" ;non-copyleft
     "third_party/flatbuffers" ;ASL2.0
     "third_party/fp16" ;Expat
+    "third_party/freetype" ;GPL2.0
     "third_party/fusejs" ;ASL2.0
+    "third_party/fxdiv" ;Expat
     "third_party/gemmlowp" ;ASL2.0
     "third_party/google_input_tools" ;ASL2.0
     "third_party/google_input_tools/third_party/closure_library" ;ASL2.0
@@ -196,6 +205,9 @@
     "third_party/harfbuzz-ng" ;Expat
     "third_party/highway" ;ASL2.0
     "third_party/hunspell" ;MPL1.1/GPL2+/LGPL2.1+
+    "third_party/hyphenation-patterns" ;Expat
+    ;; FIXME: Our icu does not have some headers such as udatamem.h.
+    "third_party/icu" ;Unicode3.0
     "third_party/ink" ;ASL2.0
     "third_party/ink_stroke_modeler" ;ASL2.0
     "third_party/inspector_protocol" ;BSD-3
@@ -208,12 +220,14 @@
     "third_party/libaddressinput" ;ASL2.0
     "third_party/libaom" ;BSD-2 or "Alliance for Open Media Patent License 1.0"
     "third_party/libaom/source/libaom/third_party/fastfeat" ;BSD-3
-    "third_party/libaom/source/libaom/third_party/SVT-AV1" ;BSD-3
     "third_party/libaom/source/libaom/third_party/vector" ;Expat
     "third_party/libaom/source/libaom/third_party/x86inc" ;ISC
+    "third_party/libc++" ;Expat
     "third_party/libdrm" ; Expat
     "third_party/libgav1" ;ASL2.0
     "third_party/libjingle_xmpp" ;BSD-3
+    "third_party/libpfm4" ;BSD
+    "third_party/libpng" ;PNG2.0
     "third_party/libphonenumber" ;ASL2.0
     "third_party/libsecret" ;LGPL2.1+
     "third_party/libsrtp" ;BSD-3
@@ -227,11 +241,15 @@
     "third_party/libvpx/source/libvpx/third_party/x86inc" ;Expat
 
     "third_party/libwebm" ;BSD-3
+    "third_party/libx11" ;BSD
+    "third_party/libxcb-keysyms" ;BSD
     "third_party/libxml/chromium" ;BSD-3
     "third_party/libyuv" ;BSD-3
     "third_party/libzip" ;BSD-3
     "third_party/lit" ;BSD-3
     "third_party/lit/v3_0" ;BSD-3
+    "third_party/llvm-libc" ;ASL2.0
+    "third_party/llvm-libc/src/shared" ;ASL2.0
     "third_party/lottie" ;Expat
     "third_party/lss" ;BSD-3
     "third_party/lzma_sdk" ;public domain
@@ -244,6 +262,7 @@
     "third_party/modp_b64" ;BSD-3
     "third_party/nasm" ;BSD-2
     "third_party/nearby" ;ASL2.0
+    "third_party/neon_2_sse" ;BSD-2
     "third_party/node" ;Expat
     "third_party/oak/chromium/proto" ;ASL2.0
     "third_party/oak/chromium/proto/attestation" ;ASL2.0
@@ -251,14 +270,20 @@
     "third_party/one_euro_filter" ;BSD-3
     "third_party/openscreen" ;BSD-3
     "third_party/openscreen/src/third_party/tinycbor" ;Expat
+    "third_party/opus" ;BSD-3
     "third_party/ots" ;BSD-3
     "third_party/pdfium" ;BSD-3
     "third_party/pdfium/third_party/agg23" ;Expat
     "third_party/pdfium/third_party/bigint" ;Public domain, BSD-3
+    "third_party/pdfium/third_party/lcms" ;Expat
+    "third_party/pdfium/third_party/libopenjpeg" ;BDS-2
     "third_party/pdfium/third_party/libtiff" ;non-copyleft
     "third_party/pdfium/third_party/freetype/include/pstables.h" ;FreeType
     "third_party/perfetto" ;ASL2.0
     "third_party/perfetto/protos/third_party/chromium" ;BSD-3
+    "third_party/perfetto/protos/third_party/pprof" ;ASL2.0
+    "third_party/perfetto/protos/third_party/primes" ;ASL2.0
+    "third_party/perfetto/protos/third_party/simpleperf" ;ASL2.0
     "third_party/pffft" ;the "FFTPACK" license
     "third_party/ply" ;BSD-3
     "third_party/polymer" ;BSD-3
@@ -268,6 +293,7 @@
     "third_party/protobuf/third_party/utf8_range" ; Expat
     "third_party/pthreadpool" ;BSD-2
     "third_party/puffin" ;Non-copyleft
+    "third_party/pyyaml" ;Expat
     "third_party/pyjson5" ;ASL2.0
     "third_party/rapidhash" ;BSD-2
     "third_party/readability" ;ASL2.0
@@ -279,11 +305,14 @@
     "third_party/search_engines_data" ;BSD-3
     "third_party/securemessage" ;ASL2.0
     "third_party/selenium-atoms" ;ASL2.0
+    "third_party/sentencepiece" ;ASL2.0
+    "third_party/sentencepiece/src/third_party/darts_clone" ;BSD-3
     "third_party/shell-encryption" ;ASL2.0
     "third_party/simdutf" ;Non-copyleft
     "third_party/simplejson" ; Non-copyleft
+    "third_party/six" ;Expat
     "third_party/skia" ;BSD-3
-    "third_party/skia/third_party/vulkanmemoryallocator" ;BSD-3, Expat
+    "third_party/skia/include/third_party/vulkan" ;BSD-3
     "third_party/smhasher" ;Expat, public domain
 
     ;; FIXME: the snappy "replacement" shim (see replace_gn_files.py below) does
@@ -338,7 +367,6 @@
     "third_party/webrtc/modules/third_party/fft" ;Non-copyleft
     "third_party/webrtc/modules/third_party/g711" ;Public domain
     "third_party/webrtc/modules/third_party/g722" ;Public domain
-    "third_party/webrtc/rtc_base/third_party/sigslot" ;Public domain
     "third_party/widevine/cdm/widevine_cdm_common.h" ;BSD-3
     "third_party/woff2" ;ASL2.0
     "third_party/wuffs" ;ASL2.0
@@ -372,7 +400,7 @@
   ;; run the Blink performance tests, just remove everything to save ~70MiB.
   '("third_party/blink/perf_tests"))
 
-(define %chromium-version "141.0.7390.65")
+(define %chromium-version "147.0.7727.55")
 (define %ungoogled-revision (string-append %chromium-version "-1"))
 (define %debian-revision (string-append "debian/" %ungoogled-revision))
 
@@ -384,7 +412,7 @@
     (file-name (git-file-name "ungoogled-chromium" %ungoogled-revision))
     (sha256
      (base32
-      "1hk4rww2gccly1qv0xnswd77haj02rlza82403dxdjm8fkdfndy6"))))
+      "0l6v4wf16067igawjlh90f3d287mkw0cq4j5lvrxxy17y1skynzc"))))
 
 (define %debian-origin
   (origin
@@ -397,7 +425,7 @@
                                 ((_ version) version))))
     (sha256
      (base32
-      "06s3kvwb3490xb28n6r3q5n1c0ylsvchiw6s4h1rrp8jqzwjbmc6"))))
+      "0gqarll08i7rcs1amapciv263xvzglc8p44ikavq3xd12yyvcd98"))))
 
 (define (origin-file origin file)
   (computed-file
@@ -410,26 +438,38 @@
 
 (define %debian-patches
   (map debian-patch
-       '("bookworm/clang19.patch"
+       '("bookworm/foreach.patch"
-         "bookworm/foreach.patch"
+         "debianization/safe-libcxx.patch"
+         "disable/enterprise-tests.patch"
          "disable/node-version-ck.patch"
+         "disable/rustc-allow-features.patch"
+         "fixes/bytemuck.patch"
          "fixes/gentoo-stylesheet.patch"
          "fixes/libcpp-headers.patch"
+         "fixes/libpng-testonly.patch"
          "fixes/rust-clanglib.patch"
+         "llvm-19/clang19.patch"
+         "llvm-19/clone-traits.patch"
+         "llvm-19/keyfactory.patch"
+         "llvm-19/value-or.patch"
+         "llvm-22/ignore-for-ubsan.patch"
          "system/openjpeg.patch"
-         ;; Remove after rust is past
+         "trixie/cookie-string-view.patch"
-         ;; <https://github.com/rust-lang/rust/pull/141061>.
+         "trixie/nodejs-main.patch")))
-         "trixie/rust-no-alloc-shim.patch")))
 
 (define %guix-patches
   (list (local-file
          (assume-valid-file-name
           (search-patch
-           "ungoogled-chromium-extension-search-path.patch")))
+           "ungoogled-chromium-custom-compiler.patch")))
         (local-file
          (assume-valid-file-name
           (search-patch
-           "ungoogled-chromium-unbundle-icu-target.patch")))
+           "ungoogled-chromium-empty-parsed-rustc-args.patch")))
+        (local-file
+         (assume-valid-file-name
+          (search-patch
+           "ungoogled-chromium-extension-search-path.patch")))
         (local-file
          (assume-valid-file-name
           (search-patch
@@ -500,9 +540,8 @@
              "#if 0"))
           (invoke "python" "build/linux/unbundle/replace_gn_files.py"
                   "--system-libraries" "flac" "fontconfig" "freetype"
-                  "harfbuzz-ng" "icu" "libjpeg"
+                  "harfbuzz-ng" "libjpeg" "libpng" "libwebp" "libxml"
-                  "libpng" "libwebp" "libxml" "libxslt" "openh264" "opus"
+                  "libxslt" "openh264" "opus" "zlib")))))
-                  "zlib")))))
 
 (define opus+custom
   (package/inherit opus
@@ -531,7 +570,7 @@
                                   %chromium-version "-lite.tar.xz"))
               (sha256
                (base32
-                "09iwglswnr6d45zz3zsjw7jpm1xlwwkxlz9h5nlhqxyd933a04fq"))
+                "1salvlw5sykx3zmsbp7cgmf7y8yy6jlgb4b4zswzsbjrprk4jnap"))
               (modules '((guix build utils)))
               (snippet (force ungoogled-chromium-snippet))))
     (build-system gnu-build-system)
@@ -548,6 +587,7 @@
       ;; directory for an exhaustive list of supported flags.
       ;; (Note: The 'configure' phase will do that for you.)
       #~(list "is_debug=false"
+              "is_component_build=false"
               ;; Use the "official" release optimizations, as opposed to
               ;; a developer build.
               "is_official_build=true"
@@ -555,6 +595,7 @@
               "use_clang_modules=false"
               "use_custom_libcxx=false" ; support for this is deprecated and to be removed.
               "optimize_webui=false"
+              "webnn_use_tflite=false"
               "safe_browsing_use_unrar=false"
               "chrome_pgo_phase=0"
               "use_sysroot=false"
@@ -572,12 +613,10 @@
               "enable_service_discovery=false"
               "enable_vr=false"
               "enable_enterprise_companion=false"
-              "enable_glic=false"
               "enable_iterator_debugging=false"
               "enable_hangout_services_extension=false"
               "enable_widevine=false"
-              ;; Disable type-checking for the Web UI to avoid a Java dependency.
+              "fatal_linker_warnings=false"
-              "enable_js_type_check=false"
               ;; Disable code using TensorFlow until it has been scrutinized
               ;; by the ungoogled project.
               "build_with_tflite_lib=false"
@@ -589,6 +628,11 @@
               "angle_has_histograms=false"
               "angle_build_tests=false"
               "build_angle_perftests=false"
+              "enable_perfetto_unittests=false"
+              "skia_enable_skshapper_tests=false"
+              "tint_build_unittests=false"
+              "enable_nocompile_tests=false"
+              "enable_screen_ai_browsertests=false"
 
               "clang_warning_suppression_file=\"\""
 
@@ -597,6 +641,8 @@
               "is_cfi=false"
 
               "symbol_level=0"
+              "blink_symbol_level=0"
+              "v8_symbol_level=0"
               "v8_enable_backtrace=false"
 
               ;; Define a custom toolchain that simply looks up CC, AR and
@@ -628,26 +674,10 @@
                              ;; invokation and fails if it's just the version number.
                              " (f6e511eec 2024-10-15) (built from a source tarball)\"")
 
-              ;; Chromium's build/rust/std/BUILD.gn has a hardcoded
-              ;; list of stdlib rlibs (stdlib_files) that GN uses to
-              ;; declare build outputs.  GN requires static output
-              ;; declarations, so the list must exactly match what
-              ;; rlibs exist in the Rust sysroot.  Chromium's list
-              ;; includes unicode_width because their bundled
-              ;; toolchain (Rust 1.89) ships it as a dependency of
-              ;; getopts 0.2.23.  Our Rust 1.93 has getopts 0.2.24
-              ;; which dropped that dependency, so unicode_width is
-              ;; not in our sysroot.  This GN arg removes it from
-              ;; the list.  (Chromium's own use of unicode_width via
-              ;; codespan-reporting is a separate vendored copy under
-              ;; third_party/rust/chromium_crates_io/ and is
-              ;; unaffected.)
-              "removed_rust_stdlib_libs=[\"unicode_width\"]"
-
               ;; Prefer system libraries.
               "use_system_freetype=true"
               "use_system_harfbuzz=true"
-              "use_system_icu=true"
+              "use_system_icu=false"
               "use_system_lcms2=true"
               "use_system_libffi=true"
               "use_system_libjpeg=true"
@@ -713,9 +743,9 @@
 
                 ;; Many files try to include ICU headers from "third_party/icu/...".
                 ;; Remove the "third_party/" prefix to use system headers instead.
-                (substitute* (find-files "chrome" "\\.cc$")
+                ;(substitute* (find-files "chrome" "\\.cc$")
-                  (("third_party/icu/source/(common|i18n)/")
+                ;  (("third_party/icu/source/(common|i18n)/")
-                   ""))
+                ;   ""))
 
                 ;; XXX: Should be unnecessary when use_system_lcms2=true.
                 (substitute* "third_party/pdfium/core/fxcodec/icc/icc_transform.h"
@@ -732,16 +762,19 @@
                   (("include \"third_party/curl")
                    "include \"curl"))
 
-                ;; Unknown flags as of clang-19, can be removed when building with
+                ;; Our clang libs and rustfmt are not under bindgen root directory.
-                ;; newer clang.
+                (substitute* '("build/rust/rust_bindgen_generator.gni"
-                (substitute* "build/config/compiler/BUILD.gn"
+                               "build/rust/rust_bindgen.gni")
-                  (("-gsimple-template-names") ""))
-
-                ;; Clang libs are not under bindgen root directory.
-                (substitute* "build/rust/rust_bindgen_generator.gni"
                   (("(_libclang_path = )rust_bindgen_root" _ libclang)
-                   (string-append libclang "clang_base_path"))))))
+                   (string-append libclang "clang_base_path"))
-          (add-after 'patch-stuff 'add-absolute-references
+                  (("(_rustfmt_path = \")\\$\\{rust_bindgen_root\\}" _ rustfmt)
+                   (string-append rustfmt "${rust_sysroot_absolute}"))))))
+          (add-after 'patch-stuff 'include-pthreadpool
+            ;; FIXME: Somehow the build system cannot locate this header.
+            (lambda _
+              (copy-file "third_party/pthreadpool/src/include/pthreadpool.h"
+                         "pthreadpool.h")))
+          (add-after 'include-pthreadpool 'add-absolute-references
             (lambda* (#:key inputs #:allow-other-keys)
               (let ((cups-config (search-input-file inputs "/bin/cups-config"))
                     (libnssckbi.so (search-input-file inputs
@@ -763,13 +796,22 @@
           (add-after 'add-absolute-references 'adjust-CPLUS_INCLUDE_PATH
             ;; The libcxx include/c++/v1 directory is not exposed via
             ;; CPLUS_INCLUDE_PATH by default, causing errors like
-            ;; "fatal error: 'format' file not found".
+            ;; "fatal error: 'format' file not found".  Also clang is
+            ;; unable to find gcc's bits/c++config.h which is machine
+            ;; dependent.
             (lambda* (#:key native-inputs inputs #:allow-other-keys)
-              (setenv "CPLUS_INCLUDE_PATH"
+              (let* ((libcxx-v1 (search-input-directory inputs
-                      (string-append
+                                                        "include/c++/v1"))
-                       (search-input-directory inputs
+                     (target-system  #$(nix-system->gnu-triplet
-                                               "/include/c++/v1")
+                                         (or (%current-target-system)
-                       ":" (getenv "CPLUS_INCLUDE_PATH")))))
+                                             (%current-system))))
+                     (target-include (string-append "include/c++/"
+                                                    target-system))
+                     (gcc-bits  (search-input-directory inputs
+                                                        target-include)))
+                (setenv "CPLUS_INCLUDE_PATH"
+                        (string-append libcxx-v1 ":" gcc-bits ":"
+                         (getenv "CPLUS_INCLUDE_PATH"))))))
           (add-before 'configure 'prepare-build-environment
             (lambda* (#:key native-inputs inputs #:allow-other-keys)
               (let ((node (search-input-file (or native-inputs inputs)
@@ -955,7 +997,7 @@
            glib
            gtk+
            harfbuzz
-           icu4c
+           icu4c-77
            lcms
            libcxx
            libffi

gnu/packages/cinnamon.scm

@@ -253,7 +253,7 @@ as well as some desktop-wide documents.")
            pkg-config
            xorg-server-for-tests))
     (inputs
-     (list atk
+     (list at-spi2-core
            cinnamon-desktop
            exempi
            gsettings-desktop-schemas

gnu/packages/code.scm

@@ -695,57 +695,6 @@ Kcov uses DWARF debugging information for compiled programs to make it
 possible to collect coverage information without special compiler switches.")
     (license license:gpl2+)))
 
-(define-public rtags
-  (package
-    (name "rtags")
-    (version "2.18")
-    (source
-     (origin
-       (method git-fetch)
-       (uri (git-reference
-             (url "https://github.com/Andersbakken/rtags")
-             (commit (string-append "v" version))))
-       (file-name (git-file-name name version))
-       (patches (search-patches "rtags-separate-rct.patch"))
-       (modules '((guix build utils)))
-       (snippet
-        ;; Part of spliting rct with rtags.
-        ;; Substitute #include "rct/header.h" with #include <rct/header.h>.
-        '(with-directory-excursion "src"
-           (delete-file-recursively "rct")        ;remove bundled copy
-           (let ((files (find-files "." ".*\\.cpp|.*\\.h")))
-             (substitute* files
-               (("#include ?\"rct/(.*.h)\"" all header)
-                (string-append "#include <rct/" header ">")))
-             #t)))
-       (sha256
-        (base32
-         "0raqjbkl1ykga4ahgl9xw49cgh3cyqcf42z36z7d6fz1fw192kg0"))))
-    (build-system cmake-build-system)
-    (arguments
-     '(#:build-type "RelWithDebInfo"
-       #:configure-flags
-       '("-DRTAGS_NO_ELISP_FILES=1")
-       #:tests? #f))
-    (native-inputs
-     (list pkg-config))
-    (inputs
-     (list bash-completion
-           clang
-           llvm
-           lua
-           rct
-           selene))
-    (home-page "https://github.com/Andersbakken/rtags")
-    (synopsis "Indexer for the C language family with Emacs integration")
-    (description
-     "RTags is a client/server application that indexes C/C++ code and keeps a
-persistent file-based database of references, declarations, definitions,
-symbolnames etc.  There’s also limited support for ObjC/ObjC++.  It allows you
-to find symbols by name (including nested class and namespace scope).  Most
-importantly we give you proper follow-symbol and find-references support.")
-    (license license:gpl3+)))
-
 (define-public colormake
   (package
     (name "colormake")

gnu/packages/containers.scm

@@ -375,7 +375,7 @@ contents, and discovering ways to shrink the size of Docker/OCI image.")
 (define-public guix-compose
   (package
     (name "guix-compose")
-    (version "0.1.1")
+    (version "0.2.0")
     (source
      (origin
        (method git-fetch)
@@ -384,7 +384,7 @@ contents, and discovering ways to shrink the size of Docker/OCI image.")
               (commit version)))
        (file-name (git-file-name name version))
        (sha256
-        (base32 "1ij6rfs5pfykk8c53q029sl2qx3k572dqdfb6pn5s569l6697ci1"))))
+        (base32 "1dy48qkz3ifxagijpvwg7rmq7hz3pikhdcfral6djyc9ppmz8mbm"))))
     (build-system guile-build-system)
     (arguments
      (list
@@ -426,7 +426,7 @@ contents, and discovering ways to shrink the size of Docker/OCI image.")
                  "guile" "-L" "./modules" "-s" "tests/test-compose.scm")))))))
     (native-inputs (list guile-3.0))
     ;; Avoid setting propagated so that we use the user’s profile.
-    (inputs (list guix guile-yamlpp))
+    (inputs (list guix guile-dotenv guile-yamlpp))
     (native-search-paths
      (list $GUIX_EXTENSIONS_PATH))
     (synopsis "Guix' docker compose compatibility layer")
@@ -714,7 +714,7 @@ Its main purpose is to support the key usage by @code{docker-init}:
 (define-public podman
   (package
     (name "podman")
-    (version "5.8.1")
+    (version "5.8.2")
     (outputs '("out" "docker"))
     (properties
      `((output-synopsis "docker" "docker alias for podman")
@@ -727,7 +727,7 @@ Its main purpose is to support the key usage by @code{docker-init}:
              (url "https://github.com/containers/podman")
              (commit (string-append "v" version))))
        (sha256
-        (base32 "1wdsdc0nj4m1v8mn95dhavi87ad0adqmld70da59gvp2abff5f0f"))
+        (base32 "12bmzbfyjsf0mwnam38cw9ib54wj1znh5b7lxzdyll9cvvkhqisr"))
        (file-name (git-file-name name version))))
     (build-system gnu-build-system)
     (arguments

gnu/packages/coreboot.scm

@@ -0,0 +1,226 @@
+;;; GNU Guix --- Functional package management for GNU
+;;; Copyright © 2018 Danny Milosavljevic <dannym@scratchpost.org>
+;;; Copyright © 2018 Ludovic Courtès <ludo@gnu.org>
+;;; Copyright © 2019 Tobias Geerinckx-Rice <me@tobias.gr>
+;;; Copyright © 2025 Cayetano Santos <csantosb@inventati.org>
+;;; Copyright © 2026 Denis 'GNUtoo' Carikli <GNUtoo@cyberdimension.org>
+;;;
+;;; This file is part of GNU Guix.
+;;;
+;;; GNU Guix is free software; you can redistribute it and/or modify it
+;;; under the terms of the GNU General Public License as published by
+;;; the Free Software Foundation; either version 3 of the License, or (at
+;;; your option) any later version.
+;;;
+;;; GNU Guix is distributed in the hope that it will be useful, but
+;;; WITHOUT ANY WARRANTY; without even the implied warranty of
+;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+;;; GNU General Public License for more details.
+;;;
+;;; You should have received a copy of the GNU General Public License
+;;; along with GNU Guix.  If not, see <http://www.gnu.org/licenses/>.
+
+(define-module (gnu packages coreboot)
+  #:use-module (gnu packages bison)
+  #:use-module (gnu packages compression)
+  #:use-module (gnu packages flex)
+  #:use-module (gnu packages pciutils)
+  #:use-module ((guix licenses) #:prefix license:)
+  #:use-module (guix build-system cargo)
+  #:use-module (guix build-system cmake)
+  #:use-module (guix build-system copy)
+  #:use-module (guix build-system gnu)
+  #:use-module (guix build-system go)
+  #:use-module (guix build-system meson)
+  #:use-module (guix build-system pyproject)
+  #:use-module (guix build-system python)
+  #:use-module (guix build-system qt)
+  #:use-module (guix download)
+  #:use-module (guix gexp)
+  #:use-module (guix git-download)
+  #:use-module (guix packages)
+  #:use-module (guix utils)
+  #:use-module (srfi srfi-26))
+
+(define %coreboot-version "26.03")
+
+(define %coreboot-origin
+  (origin
+    (method git-fetch)
+    (uri (git-reference
+           (url "https://review.coreboot.org/coreboot")
+           (commit %coreboot-version)))
+    (file-name (git-file-name "coreboot" %coreboot-version))
+    (sha256
+     (base32
+      "0436rr0vibh35phvkxrc939njvrmnfq9xw87y1b0nlllglvq07kk"))))
+
+(define-public bincfg
+  (package
+    (name "bincfg")
+    (version %coreboot-version)
+    (source %coreboot-origin)
+    (build-system gnu-build-system)
+    (arguments
+     (list
+      #:tests? #f ; no test suite
+      #:make-flags
+      #~(list
+         (string-append "CC=" #$(cc-for-target)))
+      #:phases
+      #~(modify-phases %standard-phases
+          (delete 'configure) ; no configure script
+          (add-after 'unpack 'chdir
+            (lambda _
+              (chdir "util/bincfg")))
+          (add-after 'build 'build-binaries
+            (lambda* (#:key make-flags #:allow-other-keys)
+              (for-each
+               (lambda (target result)
+                 (apply invoke "make" (string-append "gen-" target) make-flags)
+                 (rename-file result
+                              (string-append target ".bin")))
+               (list
+                ;; generate GbE for X200
+                "gbe-ich9m"
+                ;; generate GbE for X220/x230
+                "gbe-82579LM"
+                ;; generate IFD for X200
+                "ifd-x200")
+               (list
+                "flashregion_3_gbe.bin"
+                "flashregion_3_gbe.bin"
+                "flashregion_0_fd.bin"))))
+          ;; The Makefile has no install target.
+          (replace 'install
+            (lambda _
+              (let ((bin (string-append #$output "/bin"))
+                    (lib (string-append #$output "/lib/bincfg"))
+                    (data (string-append #$output "/share/bincfg")))
+                ;; Install the program
+                (install-file "bincfg" bin)
+                ;; And its data
+                (for-each
+                 (lambda (path)
+                   (install-file path data))
+                 (append (find-files "." ".*\\.set")
+                         (find-files "." ".*\\.spec")))
+                ;; And the files generated with the data
+                (for-each
+                 (lambda (path)
+                   (install-file path lib))
+                 (find-files "." ".*\\.bin"))))))))
+    (native-inputs (list bison flex))
+    (home-page "https://coreboot.org")
+    (synopsis "Encoder/decoder for binary formats described in text files")
+    (description "
+The bincfg program comes with specifications files for the following binary
+formats:
+@itemize
+@item Various DDR3 and DDR4 SPD
+@item Configuration data for the Intel 82579LM Gigabit Ethernet PHY
+@item Configuration data for the Intel Gigabit Ethernet controller present in
+      the Intel ICH9-M chipset.
+@item Intel Firmware Descriptor data for the Lenovo ThinkPad X200
+@item Configuration data for the ITE IT8718F SuperIO
+@end itemize
+It also comes with example files generated by bincfg.")
+    (license license:gpl3+)))
+
+(define-public ifdtool
+  (package
+    (name "ifdtool")
+    (version %coreboot-version)
+    (source %coreboot-origin)
+    (build-system gnu-build-system)
+    (arguments
+     (list
+      #:make-flags
+      #~(list (string-append "CC=" #$(cc-for-target))
+              "INSTALL=install"
+              (string-append "PREFIX=" #$output))
+      #:phases
+      #~(modify-phases %standard-phases
+          (add-after 'unpack 'chdir
+            (lambda _
+              (chdir "util/ifdtool")))
+          (delete 'configure))           ; no configure script
+      #:tests? #f))                    ; no test suite
+    (home-page "https://doc.coreboot.org/util/ifdtool/")
+    (synopsis "Intel Firmware Descriptor dumper")
+    (description "This package provides @command{ifdtool}, a program to
+dump Intel Firmware Descriptor data of an image file.")
+    (license license:gpl2)))
+
+(define-public intelmetool
+  (package
+    (name "intelmetool")
+    (version %coreboot-version)
+    (source %coreboot-origin)
+    (build-system gnu-build-system)
+    (arguments
+     (list
+      #:tests? #f                       ;no test suite
+      #:make-flags
+      #~(list (string-append "CC=" #$(cc-for-target))
+              "INSTALL=install"
+              (string-append "PREFIX=" #$output))
+      #:phases
+      #~(modify-phases %standard-phases
+          (add-after 'unpack 'chdir
+            (lambda _
+              (chdir "util/intelmetool")))
+          (delete 'configure) ;no configure script
+          (delete 'check))))
+    (inputs (list pciutils zlib))
+    (home-page
+     "https://github.com/coreboot/coreboot/tree/main/util/intelmetool/")
+    (synopsis "Intel Management Engine tools")
+    (description "This package provides tools for working with Intel
+Management Engine (ME).  You need to @code{sudo rmmod mei_me} and
+@code{sudo rmmod mei} before using this tool.  Also pass
+@code{iomem=relaxed} to the Linux kernel command line.")
+    (license license:gpl2)
+
+    ;; This is obviously an Intel thing, plus it requires <cpuid.h>.
+    (supported-systems '("x86_64-linux" "i686-linux"))))
+
+(define-public nvramtool
+  (package
+    (name "nvramtool")
+    (version %coreboot-version)
+    (source %coreboot-origin)
+    (build-system gnu-build-system)
+    (arguments
+     (list
+      #:tests? #f ; no test suite
+      #:make-flags
+      #~(list (string-append "CC=" #$(cc-for-target))
+              "INSTALL=install"
+              (string-append "PREFIX=" #$output))
+      #:phases
+      #~(modify-phases %standard-phases
+          (add-after 'unpack 'chdir
+            (lambda _
+              (chdir "util/nvramtool")))
+          (delete 'configure)))) ; no configure script
+    (home-page "https://coreboot.org")
+    (synopsis "Command line tool that can edit Coreboot settings")
+    (description "@command{nvramtool} can see and/or modify Coreboot settings
+like the serial port speed, log level, etc.  It requires Coreboot to be compiled
+with CONFIG_USE_OPTION_TABLE and some options require the iomem=relaxed kernel
+command line to work.  Features:
+@itemize
+@item If Coreboot was compiled without CONFIG_STATIC_OPTION_TABLE, it can change
+      its settings, which are applied after a reboot.
+@item It can modify Coreboot images  default settings with
+      @command{nvramtool -C coreboot.rom [...]}.
+@item It has various options related to the file format used to store these
+      settings.
+@item It can also read/write the CMOS memory where the Coreboot settings can be
+      located.
+@end itemize")
+    ;; Some files are "GPL-2.0-only or BSD-3-Clause", other are GPL-2.0-only
+    ;; and anyway there is. There is also a license declaration in
+    ;; cli/nvramtool.8 that applies to "This program" which uses the GPLv2.
+    (license license:gpl2)))

gnu/packages/cpp.scm

@@ -683,38 +683,6 @@ computer program to introspect and modify an object at runtime.  It is also
 the name of the library itself, which is written in C++.")
     (license license:expat)))
 
-(define-public rct
-  (let* ((commit "b3e6f41d9844ef64420e628e0c65ed98278a843a")
-         (revision "2"))
-    (package
-      (name "rct")
-      (version (git-version "0.0.0" revision commit))
-      (source (origin
-                (method git-fetch)
-                (uri (git-reference
-                      (url "https://github.com/Andersbakken/rct")
-                      (commit commit)))
-                (sha256
-                 (base32
-                  "1m2931jacka27ghnpgf1z1plkkr64z0pga4r4zdrfpp2d7xnrdvb"))
-                (patches (search-patches "rct-add-missing-headers.patch"))
-                (file-name (git-file-name name version))))
-      (build-system cmake-build-system)
-      (arguments
-       '(#:configure-flags
-         '("-DWITH_TESTS=ON"            ; To run the test suite
-           "-DRCT_RTTI_ENABLED=ON")))
-      (native-inputs
-       (list cppunit pkg-config))
-      (inputs
-       (list openssl zlib))
-      (home-page "https://github.com/Andersbakken/rct")
-      (synopsis "C++ library providing Qt-like APIs on top of the STL")
-      (description "Rct is a set of C++ tools that provide nicer (more Qt-like)
- APIs on top of Standard Template Library (@dfn{STL}) classes.")
-      (license (list license:expat        ; cJSON
-                     license:bsd-4)))))   ; everything else (LICENSE.txt)
-
 (define-public plutovg
   (package
     (name "plutovg")

gnu/packages/cross-base.scm

@@ -135,20 +135,10 @@
                                         (search-patches
                                          "ath9k-htc-firmware-binutils.patch")))
                  ((target-mingw? target)
-                  (package-with-extra-patches
+                  (package-with-extra-patches binutils
-                   (package-with-extra-configure-variable
+                                              (search-patches
-                    ;; mingw binutils does not work correctly when configured
+                                               "binutils-cross-windres.patch"
-                    ;; with `--enable-compressed-debug-sections`. An error
+                                               "binutils-mingw-w64-deterministic.patch")))
-                    ;; like the following will occur whenever you try to link:
-                    ;;
-                    ;;   x86_64-w64-mingw32-ld: final link failed: bad value
-                    ;;
-                    ;; TODO: This seems like a deeper problem that warrants
-                    ;; deeper investigation.
-                    binutils "--enable-compressed-debug-sections" "no")
-                   (search-patches
-                    "binutils-cross-windres.patch"
-                    "binutils-mingw-w64-deterministic.patch")))
                  (else binutils))
            target)))
 

gnu/packages/crypto.scm

@@ -1688,14 +1688,14 @@ structure.  However CryFS is not considered stable yet by the developers.")
 (define-public b3sum
   (package
     (name "b3sum")
-    (version "1.8.2")
+    (version "1.8.4")
     (source
       (origin
         (method url-fetch)
         (uri (crate-uri "b3sum" version))
         (file-name (string-append name "-" version ".tar.gz"))
         (sha256
-         (base32 "06qc6iv574km4j1ja4qhxyai680jkll58qzpz4mb79c0rk750dpd"))))
+         (base32 "0pkra5zh680cl9q92hpzmg9flz99b06bhpg7jyhymg1nkm0anw7a"))))
     (build-system cargo-build-system)
     (arguments
      (list

gnu/packages/databases.scm

@@ -69,6 +69,7 @@
 ;;; Copyright © 2025 Simen Endsjø <contact@simendsjo.me>
 ;;; Copyright © 2025 bdunahu <bdunahu@operationnull.com>
 ;;; Copyright © 2026 Spencer King <spencer.king@wustl.edu>
+;;; Copyright © 2026 Peter Polidoro <peter@polidoro.io>
 ;;;
 ;;; This file is part of GNU Guix.
 ;;;
@@ -1545,17 +1546,17 @@ and high-availability (HA).")
     (license license:gpl2)))                  ;'COPYING' says "version 2" only
 
 ;; Don't forget to update the other postgresql packages when upgrading this one.
-(define-public postgresql-16
+(define-public postgresql-17
   (package
     (name "postgresql")
-    (version "16.4")
+    (version "17.7")
     (source (origin
               (method url-fetch)
               (uri (string-append "https://ftp.postgresql.org/pub/source/v"
                                   version "/postgresql-" version ".tar.bz2"))
               (sha256
                (base32
-                "0vvd73rzj0sl294v15bh8yslakqv412bxqzlkqxyjwxa8pb6c5wp"))
+                "1dg9labqgph2idaypb8khdvbag29pr3h4bqv5w8k7kgc08rk97pg"))
               (patches (search-patches
                         "postgresql-disable-normalize_exec_path.patch"))))
     (build-system gnu-build-system)
@@ -1585,18 +1586,22 @@ and high-availability (HA).")
           (add-after 'build 'build-contrib
             (lambda _
               (invoke "make" "-C" "contrib")))
+          ;; FIXME: Install manpages too.
+          ;; The 'install-mangpages phase in postgresql-16 fails silently here.
           (add-after 'install 'install-contrib
             (lambda _
-              (invoke "make" "-C" "contrib" "install")))
+              (invoke "make" "-C" "contrib" "install"))))))
-          (add-after 'install 'install-manuals
-            (lambda _
-              (with-directory-excursion "doc/src/sgml"
-                (invoke "make" "install-man")
-                (invoke "make" "postgres.info")
-                (install-file "postgres.info"
-                              (string-append #$output "/share/info"))))))))
     (native-inputs
-     (list docbook-xml-4.5 docbook2x libxml2 perl pkg-config texinfo))
+     (list bison
+           docbook-xml-4.5
+           docbook-xsl
+           docbook2x
+           flex
+           libxml2
+           libxslt
+           perl
+           pkg-config
+           texinfo))
     (inputs
      (list icu4c readline `(,util-linux "lib") openssl zlib))
     (home-page "https://www.postgresql.org/")
@@ -1610,18 +1615,49 @@ TIMESTAMP.  It also supports storage of binary large objects, including
 pictures, sounds, or video.")
     (license (license:x11-style "file://COPYRIGHT"))))
 
-(define-public postgresql-15
+(define-public postgresql-16
   (package
-    (inherit postgresql-16)
+    (inherit postgresql-17)
     (name "postgresql")
-    (version "15.8")
+    (version "16.10")
     (source (origin
-              (inherit (package-source postgresql-16))
+              (method url-fetch)
               (uri (string-append "https://ftp.postgresql.org/pub/source/v"
                                   version "/postgresql-" version ".tar.bz2"))
               (sha256
                (base32
-                "0snbxmlygf7m4cxjpscmz3yjn4lnqsw313y9xgpv7vk9k9gm20s4"))
+                "0hib575m9x3z8c71gkcv9jsyq77d3qk7q2zgzvfy6clwrvs8b16y"))
+              (patches (search-patches
+                        "postgresql-disable-normalize_exec_path.patch"))))
+    (arguments
+     (substitute-keyword-arguments (package-arguments postgresql-17)
+       ((#:phases phases #~%standard-phases)
+        #~(modify-phases #$phases
+            (add-after 'install 'install-manuals
+              (lambda _
+                (with-directory-excursion "doc/src/sgml"
+                  (invoke "make" "install-man")
+                  (invoke "make" "postgres.info")
+                  (install-file "postgres.info"
+                                (string-append #$output "/share/info")))))))))
+    (native-inputs (modify-inputs (package-native-inputs postgresql-17)
+                     (delete "bison")
+                     (delete "docbook-xsl")
+                     (delete "flex")
+                     (delete "libxslt")))))
+
+(define-public postgresql-15
+  (package
+    (inherit postgresql-16)
+    (name "postgresql")
+    (version "15.15")
+    (source (origin
+              (method url-fetch)
+              (uri (string-append "https://ftp.postgresql.org/pub/source/v"
+                                  version "/postgresql-" version ".tar.bz2"))
+              (sha256
+               (base32
+                "1ais46b2ij38y75i1w336as03pybyndsd2pp2q8gdjq9igmsllsp"))
               (patches (search-patches
                         "postgresql-disable-resolve_symlinks.patch"))))
     (native-inputs (modify-inputs native-inputs
@@ -1633,26 +1669,26 @@ pictures, sounds, or video.")
   (package
     (inherit postgresql-15)
     (name "postgresql")
-    (version "14.13")
+    (version "14.20")
     (source (origin
               (inherit (package-source postgresql-15))
               (uri (string-append "https://ftp.postgresql.org/pub/source/v"
                                   version "/postgresql-" version ".tar.bz2"))
               (sha256
                (base32
-                "0misc5yiklflz96n7wxcdzzg0lcc4ahd0flzqsg6mcjs955krajr"))))))
+                "0sv45dsmyplfys6dfdjdwmrczl46s82x35xdh311nxj02q7z29vm"))))))
 
-(define-public postgresql-13
+(define-deprecated/public postgresql-13 #f
   (package
     (inherit postgresql-14)
-    (version "13.16")
+    (version "13.23")
     (source (origin
               (inherit (package-source postgresql-14))
               (uri (string-append "https://ftp.postgresql.org/pub/source/v"
                                   version "/postgresql-" version ".tar.bz2"))
               (sha256
                (base32
-                "0rc8rpsw2lwa5af35zd8iifah02wg2rnn1i890h2h8zh55hvpjy9"))))))
+                "1mhz0h7b3dmc0nnxz1wp46j95jhyi3girykkr3gbg4mg4qkwihvf"))))))
 
 (define-public postgresql postgresql-14)
 
@@ -1691,7 +1727,7 @@ pictures, sounds, or video.")
 (define-public timescaledb
   (package
     (name "timescaledb")
-    (version "2.16.1")
+    (version "2.26.1")
     (source (origin
               (method git-fetch)
               (uri (git-reference
@@ -1700,7 +1736,7 @@ pictures, sounds, or video.")
               (file-name (git-file-name name version))
               (sha256
                (base32
-                "1v17x00a15il4r3rbr0waqjv1nwzy6rcqxgfi2hdk1x235s5dg5h"))
+                "0zfm224jyz874pk4r9qlz5c2mn1xjvairhxh6widlbh3mn62m3j8"))
               (modules '((guix build utils)))
               (snippet
                ;; Remove files carrying the proprietary TIMESCALE license.
@@ -1710,8 +1746,7 @@ pictures, sounds, or video.")
                             '("scripts/c_license_header-timescale.h"
                               "scripts/license_tsl.spec"
                               "scripts/sql_license_tsl.sql"
-                              "test/perl/AccessNode.pm"
+                              "test/t/001_replication_telemetry.pl"
-                              "test/perl/DataNode.pm"
                               "test/perl/TimescaleNode.pm"))))))
     (build-system cmake-build-system)
     (arguments
@@ -1795,7 +1830,7 @@ pictures, sounds, or video.")
                  (lambda* (#:rest args)
                    (apply (assoc-ref gnu:%standard-phases 'check)
                           #:test-target "regresschecklocal" args))))))
-    (inputs (list openssl postgresql))
+    (inputs (list openssl postgresql-17))
     (home-page "https://www.timescale.com/")
     (synopsis "Time-series extension for PostgreSQL")
     (description
@@ -3044,7 +3079,7 @@ temporary directory, and destroys it when the perl script exits.")
 (define-public unixodbc
   (package
    (name "unixodbc")
-   (version "2.3.9")
+   (version "2.3.14")
    (source (origin
             (method url-fetch)
             (uri
@@ -3052,7 +3087,7 @@ temporary directory, and destroys it when the perl script exits.")
               "ftp://ftp.unixodbc.org/pub/unixODBC/unixODBC-"
               version ".tar.gz"))
             (sha256
-             (base32 "01xj65d02i3yjy7p9z08y9jakcs5szmz4rask868n7387nn3x0sj"))))
+             (base32 "0wa7a82h5dsba23155gfhh1sp4dsbaxq6pppp6q31z017vg18a2f"))))
    (build-system gnu-build-system)
    (synopsis "Data source abstraction library")
    (description "Unixodbc is a library providing an API with which to access
@@ -3062,6 +3097,64 @@ Driver.")
    ;; COPYING contains copy of lgpl2.1 - but copyright notices just say "LGPL"
    (home-page "https://www.unixodbc.org")))
 
+(define-public sqliteodbc
+  (package
+    (name "sqliteodbc")
+    (version "0.99991")
+    (source (origin
+              (method url-fetch)
+              (uri (string-append "http://www.ch-werner.de/sqliteodbc/"
+                                  name "-" version ".tar.gz"))
+              (sha256
+               (base32
+                "0p4avhqxnd2l49g3vpzwrmdi8wxyqzy0vswalaagmqfdsfwav52d"))))
+    (build-system gnu-build-system)
+    (arguments
+     (list
+      #:tests? #f                      ; no check target
+      #:configure-flags
+      #~(list "--disable-static"
+              (string-append "--with-sqlite3=" #$(this-package-input "sqlite"))
+              (string-append "--with-odbc=" #$(this-package-input "unixodbc")))
+      #:phases
+      #~(modify-phases %standard-phases
+          (add-before 'install 'create-lib-directory
+            (lambda _
+              (mkdir-p (string-append #$output "/lib"))))
+          (add-after 'install 'remove-extra-sqlite-extensions
+            (lambda _
+              ;; Keep this package focused on the ODBC driver itself.
+              (for-each delete-file
+                        (find-files (string-append #$output "/lib")
+                                    "^libsqlite3_mod_.*\\.(la|so)$"))))
+          (add-after 'install 'install-odbcinst.ini
+            (lambda _
+              (let ((dir (string-append #$output "/share/sqliteodbc")))
+                (mkdir-p dir)
+                (call-with-output-file (string-append dir "/odbcinst.ini")
+                  (lambda (port)
+                    (display
+                     (string-append
+                      "[SQLite3]\n"
+                      "Description = SQLite3 ODBC Driver\n"
+                      "Driver      = " #$output "/lib/libsqlite3odbc.so\n"
+                      "Setup       = " #$output "/lib/libsqlite3odbc.so\n"
+                      "Threading   = 2\n")
+                     port)))))))))
+    (native-search-paths
+     (list (search-path-specification
+            (variable "ODBCSYSINI")
+            (files '("share/sqliteodbc"))
+            (separator #f))))
+    (inputs (list sqlite unixodbc))
+    (home-page "http://www.ch-werner.de/sqliteodbc/")
+    (synopsis "ODBC driver for SQLite")
+    (description
+     "SQLiteODBC provides an ODBC driver for SQLite 3 databases.  It installs
+the shared library and a driver registration file so applications using
+unixODBC can resolve the @code{SQLite3} driver name from a Guix profile.")
+    (license license:tcl/tk)))
+
 (define-public nanodbc
   (package
     (name "nanodbc")

gnu/packages/debian.scm

@@ -20,18 +20,6 @@
 ;;; along with GNU Guix.  If not, see <http://www.gnu.org/licenses/>.
 
 (define-module (gnu packages debian)
-  #:use-module ((guix licenses) #:prefix license:)
-  #:use-module (guix download)
-  #:use-module (guix git-download)
-  #:use-module (guix gexp)
-  #:use-module (guix packages)
-  #:use-module (guix utils)
-  #:use-module (guix build-system cmake)
-  #:use-module (guix build-system copy)
-  #:use-module (guix build-system gnu)
-  #:use-module (guix build-system perl)
-  #:use-module (guix build-system trivial)
-  #:use-module (gnu packages adns)
   #:use-module (gnu packages autotools)
   #:use-module (gnu packages backup)
   #:use-module (gnu packages base)
@@ -40,6 +28,7 @@
   #:use-module (gnu packages crypto)
   #:use-module (gnu packages databases)
   #:use-module (gnu packages dbm)
+  #:use-module (gnu packages dns)
   #:use-module (gnu packages gettext)
   #:use-module (gnu packages gnupg)
   #:use-module (gnu packages guile)
@@ -53,6 +42,17 @@
   #:use-module (gnu packages tls)
   #:use-module (gnu packages web)
   #:use-module (gnu packages wget)
+  #:use-module (guix build-system cmake)
+  #:use-module (guix build-system copy)
+  #:use-module (guix build-system gnu)
+  #:use-module (guix build-system perl)
+  #:use-module (guix build-system trivial)
+  #:use-module (guix download)
+  #:use-module (guix gexp)
+  #:use-module (guix git-download)
+  #:use-module ((guix licenses) #:prefix license:)
+  #:use-module (guix packages)
+  #:use-module (guix utils)
   #:use-module (srfi srfi-1)
   #:use-module (srfi srfi-26))
 

gnu/packages/diffoscope.scm

@@ -79,7 +79,7 @@
 (define-public diffoscope
   (package
     (name "diffoscope")
-    (version "315")
+    (version "317")
     (source
      (origin
        (method git-fetch)
@@ -88,7 +88,7 @@
              (commit version)))
        (file-name (git-file-name name version))
        (sha256
-        (base32 "1q2q60hw36d1capqdrg6gp2220dg87bmxgmk52m7yml4xw13zi2p"))))
+        (base32 "13r96c49wrpx0xa8bbkki832w58gjdgqb4khjsaawk5mb5yv4c39"))))
     (build-system pyproject-build-system)
     (arguments
      (list

gnu/packages/disk.scm

@@ -1231,7 +1231,7 @@ passphrases.")
 (define-public ndctl
   (package
     (name "ndctl")
-    (version "78")
+    (version "84")
     (source (origin
               (method git-fetch)
               (uri (git-reference
@@ -1240,7 +1240,7 @@ passphrases.")
               (file-name (git-file-name name version))
               (sha256
                (base32
-                "0rhmxjajxxslsikixlf9cdg5vcn42h7zzqkqj5p5pshxch368kn0"))))
+                "0jal7w4mk5l5j0qfays27kya8n1h2qwkncl0s317rfxp56bkjp6y"))))
     (build-system meson-build-system)
     (arguments
      ;; The test suite runs but SKIPs all tests: do not consider this tested!

gnu/packages/distributed.scm

@@ -51,7 +51,7 @@
 (define-public boinc-client
   (package
     (name "boinc-client")
-    (version "8.2.8")
+    (version "8.2.9")
     (source (origin
               (method git-fetch)
               (uri (git-reference
@@ -62,7 +62,7 @@
               (file-name (git-file-name "boinc" version))
               (sha256
                (base32
-                "1ppcf57p6dkv9dv5k90fj3xhbv9di2d3yjkg2flfv5d45s82lay8"))))
+                "0ik9423ii6kal29jdn907pxy8w86zpi8n158qx1gcsh8lsaif1v5"))))
     (build-system gnu-build-system)
     (arguments
      (list

gnu/packages/django.scm

@@ -549,6 +549,7 @@ when coding custom template tags.")
        (uri (git-reference
              (url "https://github.com/jazzband/django-taggit")
              (commit version)))
+       (file-name (git-file-name name version))
        (sha256
         (base32
          "1i8an3wcl7nygl5f565jcpyhyws9gabawazggxpf6m3vklxn3cj0"))))
@@ -709,13 +710,13 @@ your code.")
 (define-public python-django-filter
   (package
     (name "python-django-filter")
-    (version "25.1")
+    (version "25.2")
     (source (origin
               (method url-fetch)
               (uri (pypi-uri "django_filter" version))
               (sha256
                (base32
-                "0lvi82f3dnj89ip8hry8fq8w7x632r5p84dlr451rnm8izsfxj8y"))))
+                "08wgzqirabxzcdhh0wvv45hqr6dqxy3ifm7mjv86hi0zjd59h3kn"))))
     (build-system pyproject-build-system)
     (arguments
      '(#:phases

gnu/packages/dlang.scm

@@ -75,7 +75,8 @@
        (uri (string-append "https://github.com/ldc-developers/ldc/releases"
                            "/download/v" version "/ldc-" version "-src.tar.gz"))
        (sha256
-        (base32 "13pkg69wjj4ali4ikijicccpg8y6f2hghhb70z9lrqr2w3pkhqna"))))
+        (base32 "13pkg69wjj4ali4ikijicccpg8y6f2hghhb70z9lrqr2w3pkhqna"))
+       (patches (search-patches "ldc-i686-int128-alignment.patch"))))
     (build-system cmake-build-system)
     (arguments
      `(#:disallowed-references (,tzdata-for-tests)
@@ -107,9 +108,7 @@
            (lambda _
              (invoke "cmake" "--install" "."))))))
     (inputs
-     `(("libconfig" ,libconfig)
+     `(("zlib" ,zlib)))
-       ("libedit" ,libedit)
-       ("zlib" ,zlib)))
     (native-inputs
      `(("lld-wrapper" ,(make-lld-wrapper lld-17 #:lld-as-ld? #t))
        ("llvm" ,llvm-17)
@@ -372,6 +371,7 @@ integration tests...\n")
               ;; Do not build the shared libphobos2.so library, to avoid
               ;; retaining a reference to gcc:lib.
               "SHARED=0"
+              "DIFFABLE=1"              ;constant timestamp
               "VERBOSE=1")
       #:modules
       `(,@%default-gnu-modules
@@ -476,6 +476,15 @@ integration tests...\n")
               (phase-in-sub-dir 'build "dmd"))
             (add-after 'build 'build-phobos
               (phase-in-sub-dir 'build "phobos"))
+            (add-after 'build-phobos 'build-man
+              (lambda* (#:key make-flags #:allow-other-keys)
+                (with-directory-excursion "dmd/compiler/docs"
+                  (let ((dmd (or (which "gdmd")
+                                 (which "dmd"))))
+                    ((assoc-ref %standard-phases 'build)
+                     #:make-flags (cons
+                                   (string-append "DMD=" dmd)
+                                   make-flags))))))
             (replace 'check
               (phase-in-sub-dir 'check "dmd"))
             (add-after 'check 'check-phobos
@@ -501,7 +510,7 @@ integration tests...\n")
                       (for-each (cut install-file <> lib-lib)
                                 (find-files "." "^libdruntime\\.so[.0-9]*$")))
                     (copy-recursively "druntime/import" out-include)
-                    (copy-recursively "compiler/docs/man" out-man))
+                    (copy-recursively "generated/docs/man" out-man))
                   (with-directory-excursion "phobos"
                     (with-directory-excursion build-sub-dir
                       (install-file "libphobos2.a" out-lib)
@@ -676,6 +685,7 @@ needed.")
                  (lambda* (#:key tests? #:allow-other-keys)
                    (when tests?
                      (invoke "bin/rdmd" "rdmd_test.d" "bin/rdmd"
+                             "-m" (if #$(target-64bit?) "64" "32")
                              "--rdmd-default-compiler" "ldmd2"))))
                (replace 'install
                  (lambda* (#:key outputs #:allow-other-keys)

gnu/packages/dns.scm

@@ -1,12 +1,13 @@
 ;;; GNU Guix --- Functional package management for GNU
+;;; Copyright © 2014 Ludovic Courtès <ludo@gnu.org>
 ;;; Copyright © 2015 Taylan Ulrich Bayırlı/Kammer <taylanbayirli@gmail.com>
 ;;; Copyright © 2016 Mark H Weaver <mhw@netris.org>
-;;; Copyright © 2016 Ricardo Wurmus <rekado@elephly.net>
+;;; Copyright © 2016, 2018 Ricardo Wurmus <rekado@elephly.net>
-;;; Copyright © 2016, 2017 Efraim Flashner <efraim@flashner.co.il>
+;;; Copyright © 2015-2018, 2020 Efraim Flashner <efraim@flashner.co.il>
 ;;; Copyright © 2016 John Darrington <jmd@gnu.org>
 ;;; Copyright © 2016 Nikita <nikita@n0.is>
 ;;; Copyright © 2016–2022 Tobias Geerinckx-Rice <me@tobias.gr>
-;;; Copyright © 2016, 2020 Marius Bakke <mbakke@fastmail.com>
+;;; Copyright © 2016, 2019-2021 Marius Bakke <mbakke@fastmail.com>
 ;;; Copyright © 2017 Vasile Dumitrascu <va511e@yahoo.com>
 ;;; Copyright © 2017 Gregor Giesen <giesen@zaehlwerk.net>
 ;;; Copyright © 2022 Oleg Pykhalov <go.wigust@gmail.com>
@@ -21,9 +22,11 @@
 ;;; Copyright © 2021, 2024 Zheng Junjie <873216071@qq.com>
 ;;; Copyright © 2023 Bruno Victal <mirai@makinata.eu>
 ;;; Copyright © 2023 Hilton Chain <hako@ultrarare.space>
+;;; Copyright © 2023 Janneke Nieuwenhuizen <janneke@gnu.org>
 ;;; Copyright © 2024 John Kehayias <john.kehayias@protonmail.com>
 ;;; Copyright © 2024, 2025 Ashish SHUKLA <ashish.is@lostca.se>
 ;;; Copyright © 2025 Artyom V. Poptsov <poptsov.artyom@gmail.com>
+;;; Copyright © 2026 Anderson Torres <anderson.torres.8519@gmail.com>
 ;;;
 ;;; This file is part of GNU Guix.
 ;;;
@@ -46,12 +49,12 @@
   #:use-module (gnu packages base)
   #:use-module (gnu packages bash)
   #:use-module (gnu packages check)
-  #:use-module (gnu packages curl)
-  #:use-module (gnu packages databases)
-  #:use-module (gnu packages documentation)
   #:use-module (gnu packages compression)
   #:use-module (gnu packages crypto)
+  #:use-module (gnu packages curl)
+  #:use-module (gnu packages databases)
   #:use-module (gnu packages datastructures)
+  #:use-module (gnu packages documentation)
   #:use-module (gnu packages elf)
   #:use-module (gnu packages flex)
   #:use-module (gnu packages freedesktop)
@@ -65,6 +68,7 @@
   #:use-module (gnu packages libidn)
   #:use-module (gnu packages linux)
   #:use-module (gnu packages lua)
+  #:use-module (gnu packages m4)
   #:use-module (gnu packages ncurses)
   #:use-module (gnu packages nettle)
   #:use-module (gnu packages networking)
@@ -73,6 +77,8 @@
   #:use-module (gnu packages pkg-config)
   #:use-module (gnu packages protobuf)
   #:use-module (gnu packages python)
+  #:use-module (gnu packages python-build)
+  #:use-module (gnu packages python-web)
   #:use-module (gnu packages python-xyz)
   #:use-module (gnu packages ragel)
   #:use-module (gnu packages serialization)
@@ -84,17 +90,175 @@
   #:use-module (gnu packages web)
   #:use-module (gnu packages xml)
   #:use-module (gnu packages)
-  #:use-module (guix gexp)
+  #:use-module (guix build-system cmake)
-  #:use-module ((guix licenses) #:prefix license:)
-  #:use-module (guix packages)
-  #:use-module ((guix search-paths) #:select ($SSL_CERT_DIR $SSL_CERT_FILE))
-  #:use-module (guix download)
-  #:use-module (guix git-download)
-  #:use-module (guix utils)
   #:use-module (guix build-system copy)
   #:use-module (guix build-system glib-or-gtk)
   #:use-module (guix build-system gnu)
-  #:use-module (guix build-system meson))
+  #:use-module (guix build-system meson)
+  #:use-module (guix build-system pyproject)
+  #:use-module (guix build-system python)
+  #:use-module (guix download)
+  #:use-module (guix gexp)
+  #:use-module (guix git-download)
+  #:use-module ((guix licenses) #:prefix license:)
+  #:use-module (guix packages)
+  #:use-module ((guix search-paths) #:select ($SSL_CERT_DIR $SSL_CERT_FILE))
+  #:use-module (guix utils))
+
+(define-public adns
+  (package
+    (name "adns")
+    (version "1.6.1")
+    (source
+     (origin
+       (method git-fetch)
+       (uri (git-reference
+              (url "git://git.chiark.greenend.org.uk/~ianmdlvl/adns.git")
+              (commit (string-append "adns-" version))))
+       (sha256
+        (base32
+         "0ln3l5j7wb1xazrzl76p9xar52p6l2k1cwy7jazxw1acl71k9h5n"))))
+    (build-system gnu-build-system)
+    (arguments
+     (list
+      ;; INFO: Tests expect real name resolution to work.
+      #:tests? #f
+      #:configure-flags
+      #~(list
+         ;; Make sure the programs under bin/ find libadns.so.
+         (string-append "LDFLAGS=-Wl,-rpath -Wl,"
+                        #$output:out
+                        "/lib"))))
+    (native-inputs
+     (list m4))
+    (home-page "https://www.gnu.org/software/adns/")
+    (synopsis "Asynchronous DNS client library and utilities")
+    (description
+     "GNU adns is a C library that provides easy-to-use @acronym{DNS, Domain
+Name System} resolution functionality.  The library is asynchronous, allowing
+several concurrent calls.  The package also includes several command-line
+utilities for use in scripts.")
+    (license license:gpl3+)))
+
+(define-public c-ares
+  (package
+    (name "c-ares")
+    (version "1.34.4")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (string-append
+             "https://github.com/c-ares/c-ares/releases/download/v"
+             version "/" name "-" version ".tar.gz"))
+       (sha256
+        (base32
+         "0br2msk3bpl5myhjp9vr5j2scpspvbg2fpnz69dcrr4ycpnxnf7s"))))
+    (build-system gnu-build-system)
+    (arguments
+     (list
+      #:phases
+      #~(modify-phases %standard-phases
+          (add-before 'check 'filter-live-tests
+            (lambda _
+              ;; Filter tests that require internet access.
+              (setenv "GTEST_FILTER" "-*.Live*:*.FamilyV4*")))
+          #$@(if (system-hurd?)
+                 #~((add-after 'unpack 'skip-tests
+                      (lambda _
+                        (substitute* "test/ares-test-main.cc"
+                          (("(^| )main *\\(.*" all)
+                           (string-append all "  exit (77);\n")))))
+                    (add-after 'filter-live-tests 'filter-hurd-tests
+                      (lambda _
+                        (setenv "GTEST_FILTER"
+                                (string-append
+                                 (getenv "GTEST_FILTER")
+                                 ":.*Basic/2"
+                                 ":.*CancelImmediate/2"
+                                 ":.*CancelImmediateGetHostByAddr/2"
+                                 ":.*CancelLater/1"
+                                 ":.*FamilyUnspecified/2"
+                                 ":.*FamilyV6/2"
+                                 ":.*GetAddrInfoParallelLookups/1"
+                                 ":.*GetHostByAddrDestroy/2"
+                                 ":.*GetHostByNameCNAMENoData/2"
+                                 ":.*GetHostByNameDestroyAbsolute/2"
+                                 ":.*GetHostByNameDestroyRelative/2"
+                                 ":.*GetHostByNameParallelLookups/1"
+                                 ":.*HostAlias/2"
+                                 ":.*HostAliasMissing/2"
+                                 ":.*HostAliasMissingFile/2"
+                                 ":.*NotImplResponse/2"
+                                 ":.*RefusedResponse/2"
+                                 ":.*Resend/1"
+                                 ":.*RetryWithoutEDNS/2"
+                                 ":.*SearchDomains/2"
+                                 ":.*SearchDomainsBare/2"
+                                 ":.*SearchDomainsServFailOnAAAA/2"
+                                 ":.*SearchDomainsWithResentReply/1"
+                                 ":.*SearchHighNdots/2"
+                                 ":.*SearchNoDataThenFail/2"
+                                 ":.*SearchNoDataThenNoDataBare/2"
+                                 ":.*SearchNoDataThenSuccess/2"
+                                 ":.*ServFailResponse/2"
+                                 ":.*SimpleQuery/2"
+                                 ":.*SockCallback/2"
+                                 ":.*SockConfigureCallback/2"
+                                 ":.*SortListV4/2"
+                                 ":.*SortListV6/2"
+                                 ":.*ThirdServer/2"
+                                 ":.*TruncationRetry/1"
+                                 ":.*UnspecifiedFamilyCname6A4/2"
+                                 ":.*UnspecifiedFamilyV4/2"
+                                 ":.*UnspecifiedFamilyV6/2")))))
+                 #~()))))
+    (native-inputs
+     (list pkg-config))
+    (home-page "https://c-ares.haxx.se/")
+    (synopsis "C library for asynchronous DNS requests")
+    (description
+     "C-ares is a C library that performs DNS requests and name resolution
+asynchronously.  It is intended for applications which need to perform DNS
+queries without blocking, or need to perform multiple DNS queries in parallel.
+The primary examples of such applications are servers which communicate with
+multiple clients and programs with graphical user interfaces.")
+    (license (license:x11-style "https://c-ares.haxx.se/license.html"))))
+
+(define-public c-ares-for-node-lts
+  (hidden-package c-ares))
+
+(define-public c-ares-for-node-bootstrap
+  (hidden-package
+   (package
+     (inherit c-ares)
+     (version "1.18.1")
+     (source
+      (origin
+        (method url-fetch)
+        (uri (string-append
+              "https://c-ares.haxx.se/download/c-ares-" version
+              ".tar.gz"))
+        (sha256
+         (base32
+          "1kxviskwsaa7dcgscvssxa8ps88pdq7kq4z93gxvz7sam2l54z8s")))))))
+
+;; INFO: gRPC requires a c-ares built with CMake in order to get the .cmake
+;; modules.  We can not build c-ares itself with CMake because that would
+;; introduce a circular dependency through nghttp2.
+;;
+;; TODO: It would be nice if we could extract the modules somehow and make
+;; them work with the "normal" c-ares package instead of building a whole new
+;; library.
+(define-public c-ares/cmake
+  (hidden-package
+   (package
+     (inherit c-ares)
+     (build-system cmake-build-system)
+     (arguments
+      (list
+       ;; INFO: Tests require name resolution (the normal variant runs no
+       ;; tests).
+       #:tests? #f)))))
 
 (define-public cloudflare-cli
   (let ((commit "2d986d3ec1b0e3158c4bd40e8918947cb74aa392")
@@ -143,6 +307,58 @@ protocol.")
       (home-page "https://github.com/earlchew/cloudflare-cli")
       (license license:expat))))
 
+(define-public ddclient
+  (package
+    (name "ddclient")
+    (version "4.0.0")
+    (source
+     (origin
+       (method git-fetch)
+       (uri (git-reference
+             (url "https://github.com/ddclient/ddclient")
+             (commit (string-append "v" version))))
+       (file-name (git-file-name name version))
+       (sha256
+        (base32 "0sz4f7qx4yjg6q6ybhzilb7f0kshz46c54y3i4hq2nww2bhkc8a4"))))
+    (build-system gnu-build-system)
+    (arguments
+     (list
+      #:phases
+      #~(modify-phases %standard-phases
+          (add-before 'bootstrap 'patch-ddclient.in-shebang
+            (lambda _
+              ;; This is run in the bootstrap phase, so patch before
+              (patch-shebang "ddclient.in")))
+          (add-after 'install 'wrap-program
+            (lambda* (#:key inputs #:allow-other-keys)
+              (wrap-program (string-append #$output "/bin/ddclient")
+                `("PERL5LIB" ":" prefix
+                  ,(map (lambda (input-name)
+                          (string-append (assoc-ref inputs input-name)
+                                         "/lib/perl5/site_perl"))
+                        '("perl-json")))))))))
+    (native-inputs
+     (list autoconf
+           automake
+           perl-http-daemon
+           perl-plack
+           perl-test-mockmodule
+           perl-test-tcp
+           perl-test-warnings))
+    (inputs
+     (list curl
+           perl
+           perl-json
+           bash-minimal))
+    (home-page "https://github.com/ddclient/ddclient")
+    (synopsis "Dynamic DNS update client")
+    (description
+     "ddclient is used to update dynamic DNS entries for accounts on many
+dynamic DNS services.  It supports a wide range of routers and protocols,
+including Cloudflare, Namecheap, DynDNS, FreeDNS, Google Domains, and many
+more.")
+    (license license:gpl2+)))
+
 (define-public ldns
   (package
     (name "ldns")
@@ -295,35 +511,37 @@ prompt the user with the option to go with insecure DNS only.")
 (define-public dnsmasq
   (package
     (name "dnsmasq")
-    (version "2.90")
+    (version "2.92")
-    (source (origin
+    (source
-              (method url-fetch)
+     (origin
-              (uri (string-append
+       (method git-fetch)
-                    "http://www.thekelleys.org.uk/dnsmasq/dnsmasq-"
+       (uri (git-reference
-                    version ".tar.xz"))
+              (url "http://thekelleys.org.uk/git/dnsmasq.git")
-              (sha256
+              (commit (string-append "v" version))))
-               (base32
+       (file-name (git-file-name name version))
-                "1r09l537vi867hlpv6vl7nvqhscvq1kf04m896bfrgrpv2dk0l4f"))))
+       (sha256
+        (base32 "055gn5kigz0m9y09vig97s1g257hnlkhw4wv9d9wdficnsxcbwwm"))))
     (build-system gnu-build-system)
+    (arguments
+     (list
+      #:tests? #f ;no tests
+      #:make-flags
+      #~(list (string-append "PREFIX=" #$output)
+              (string-append "CC=" #$(cc-for-target))
+              (string-append "PKG_CONFIG=" #$(pkg-config-for-target))
+              "COPTS=\"-DHAVE_DBUS\"")
+      #:phases
+      #~(modify-phases %standard-phases
+          (delete 'configure) ;no configure
+          (add-after 'install 'install-dbus
+            (lambda _
+              (install-file "dbus/dnsmasq.conf"
+                            (string-append #$output "/etc/dbus-1/system.d")))))))
     (native-inputs
      (list pkg-config))
     (inputs
      (list dbus))
-    (arguments
+    (home-page "https://thekelleys.org.uk/dnsmasq/doc.html")
-     `(#:phases
-       (modify-phases %standard-phases
-         (delete 'configure)
-         (add-after 'install 'install-dbus
-           (lambda _
-             (install-file "dbus/dnsmasq.conf"
-                           (string-append %output "/etc/dbus-1/system.d")))))
-
-       #:make-flags (list (string-append "PREFIX=" (assoc-ref %outputs "out"))
-                          (string-append "CC=" ,(cc-for-target))
-                          (string-append "PKG_CONFIG=" ,(pkg-config-for-target))
-                          "COPTS=\"-DHAVE_DBUS\"")
-       #:tests? #f))                    ; no ‘check’ target
-    (home-page "https://www.thekelleys.org.uk/dnsmasq/doc.html")
     (synopsis "Small caching DNS proxy and DHCP/TFTP server")
     (description
      "Dnsmasq is a light-weight DNS forwarder and DHCP server.  It is designed
@@ -336,6 +554,39 @@ and BOOTP/TFTP for network booting of diskless machines.")
     ;; Source files only say GPL2 and GPL3 are allowed.
     (license (list license:gpl2 license:gpl3))))
 
+(define-public dnsupdate
+  (package
+    (name "dnsupdate")
+    (version "0.4.1")
+    (source
+     (origin
+       (method git-fetch)
+       (uri (git-reference
+              (url "https://github.com/lopsided98/dnsupdate")
+              (commit version)))
+       (file-name (git-file-name name version))
+       (sha256
+        (base32 "0bp6mm0yhg4hs698xdmvcfad4jqf5rgb1cab88pfzyx9w52x0ag6"))))
+    (build-system pyproject-build-system)
+    (arguments
+     (list #:test-backend #~'unittest
+           #:test-flags #~'("discover" "-p" "*_test.py")))
+    (native-inputs
+     (list python-setuptools))
+    (propagated-inputs
+     (list python-beautifulsoup4
+           python-netifaces
+           python-pyyaml
+           python-requests))
+    (home-page "https://github.com/lopsided98/dnsupdate")
+    (synopsis "Modern and flexible dynamic DNS client")
+    (description
+     "Dnsupdate is a dynamic DNS client that provides support for multiple DNS
+services, including Afraid.org FreeDNS, Cloudflare, IETF standard DNS
+updates (nsupdate), and custom HTTP-based services.  It uses YAML
+configuration files and supports multiple address detection methods.")
+    (license license:gpl3+)))
+
 ;; 'bind' is the name of a built-in Guile procedure, which is why we choose a
 ;; different name here.
 (define-public isc-bind

gnu/packages/documentation.scm

@@ -70,6 +70,7 @@
   #:use-module (gnu packages qt)
   #:use-module (gnu packages sqlite)
   #:use-module (gnu packages sphinx)
+  #:use-module (gnu packages tex)
   #:use-module (gnu packages uglifyjs)
   #:use-module (gnu packages xml)
   #:use-module (gnu packages xorg))
@@ -108,10 +109,13 @@
                           #$output)
                          (("\\$cfg\\{'TMPSPACE'\\} = q'[^']*'")
                           "$cfg{'TMPSPACE'} = q'/tmp'")))))))
+    (propagated-inputs (list texlive-preview texlive-xcolor texlive-dvips))
     (inputs (list perl netpbm ghostscript))
     (synopsis "LaTeX documents to HTML")
     (description "LaTeX2HTML is a utility that converts LaTeX documents to web
-pages in HTML.")
+pages in HTML.  Since there are many different latex packages, it is expected
+that the user has their latex installation set up correctly when invoking
+@code{latex2html}.")
     (home-page "https://www.latex2html.org/")
     (license license:gpl2+)))
 

gnu/packages/duckdb.scm

@@ -148,13 +148,13 @@ system.")
 (define-public r-duckdb
   (package
     (name "r-duckdb")
-    (version "1.4.4")
+    (version "1.5.1")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "duckdb" version))
        (sha256
-        (base32 "1hch36v3lsymnx30lv3cjy12gs3v3mhd44ha97l7w9mwp9wbzmxl"))
+        (base32 "177621m08whqqk4yhj3zrr08l3d9hhlqh3gm9jzhi5cplg47cksq"))
        ;; This package bundles the duckdb sources and builds a custom variant
        ;; of duckdb.  I'd be happy to link it with our duckdb library instead,
        ;; but it does not seem possible to do that.
@@ -179,10 +179,12 @@ system.")
                          r-dplyr
                          r-remotes
                          r-rlang
+                         r-sf
                          r-testthat
                          r-tibble
                          r-vctrs
                          r-withr
+                         r-wk
                          tzdata-for-tests))
     (home-page "https://r.duckdb.org/")
     (synopsis "DBI package for the DuckDB database management system")

gnu/packages/education.scm

@@ -4,7 +4,7 @@
 ;;; Copyright © 2016 Hartmut Goebel <h.goebel@crazy-compilers.com>
 ;;; Copyright © 2017-2023 Efraim Flashner <efraim@flashner.co.il>
 ;;; Copyright © 2018–2021 Tobias Geerinckx-Rice <me@tobias.gr>
-;;; Copyright © 2018-2025 Nicolas Goaziou <mail@nicolasgoaziou.fr>
+;;; Copyright © 2018-2026 Nicolas Goaziou <mail@nicolasgoaziou.fr>
 ;;; Copyright © 2020 Robert Smith <robertsmith@posteo.net>
 ;;; Copyright © 2020 Guy Fleury Iteriteka <gfleury@disroot.org>
 ;;; Copyright © 2020 Jakub Kądziołka <kuba@kadziolka.net>
@@ -385,7 +385,7 @@ not have any other specialized device.")
 (define-public openboard
   (package
     (name "openboard")
-    (version "1.7.3")
+    (version "1.7.7")
     (source
      (origin
        (method git-fetch)
@@ -394,7 +394,7 @@ not have any other specialized device.")
              (commit (string-append "v" version))))
        (file-name (git-file-name name version))
        (sha256
-        (base32 "1098pys5p82sx97xrhw54vlkn6jly0rhq8b09grmmx2h4mcpj2i2"))))
+        (base32 "1i27h84p77pl1chw791fjs3vyzsjvsqc9ky2mbw7g8xpzxz1nd9j"))))
     (build-system qt-build-system)
     (arguments
      (list

gnu/packages/electronics.scm

@@ -240,8 +240,8 @@ are also taken from the original.")
       (license license:gpl3+))))
 
 (define-public abc
-  (let ((commit "c18b9a24de46d3b0209afa416511b7a1127344f9")
+  (let ((commit "80c8a9a1928ef8148a6b504e9590ec07c55c8bcf")
-        (revision "9"))
+        (revision "10"))
     (package
       (name "abc")
       (version (git-version "0.0" revision commit))
@@ -253,7 +253,7 @@ are also taken from the original.")
                 (file-name (git-file-name name version))
                 (sha256
                  (base32
-                  "12fjhlr9r34l6kw2jyaalh53fs783r1h2zx0ldzaxxrbcslb0bxh"))))
+                  "1fbnwsd841z86vfv45443qfpx0l199vf08sgms8wyz19jw7m5ds6"))))
       (build-system gnu-build-system)
       (inputs
        (list readline))
@@ -278,7 +278,7 @@ formal verification.")
   (package
     (inherit abc)
     (name "abc-yosyshq")
-    (version "0.63")
+    (version "0.64")
     (source (origin
               (method git-fetch)
               (uri (git-reference
@@ -287,7 +287,7 @@ formal verification.")
               (file-name (git-file-name name version))
               (sha256
                (base32
-                "1nwj4zhjqjgvb7fh877j51kfccwzrc591ag25qm9jirycgq1cqx6"))))
+                "1jk74yq7dnrnai8r9hqc10jcjmgj50jxj6hsflmvc61acm1r3f8r"))))
     (home-page "https://github.com/YosysHQ/abc/")
     (description "ABC is a program for sequential logic synthesis and
 formal verification.  This is the Yosyshq fork of ABC.")
@@ -296,7 +296,7 @@ formal verification.  This is the Yosyshq fork of ABC.")
 (define-public apycula
   (package
     (name "apycula")
-    (version "0.31")
+    (version "0.32")
     ;; The pypi tar.gz file includes the necessary .pickle files, not available
     ;; in the home-page repository.
     (source
@@ -304,7 +304,7 @@ formal verification.  This is the Yosyshq fork of ABC.")
        (method url-fetch)
        (uri (pypi-uri "apycula" version))
        (sha256
-        (base32 "0pf43cd071kv5ann78hl5qrcj9vhndr46ds2g12sgnfjfvh6pfpg"))))
+        (base32 "0zz6mz1s7razbqsysaji7qwfsjj19av4mg7zclxaigz4hmq9ar0d"))))
     (build-system pyproject-build-system)
     (arguments
      (list #:tests? #f ;requires Gowin EDA tools
@@ -467,7 +467,7 @@ individual low-level driver modules.")
 (define-public eqy
   (package
     (name "eqy")
-    (version "0.63")
+    (version "0.64")
     (source
      (origin
        (method git-fetch)
@@ -476,7 +476,7 @@ individual low-level driver modules.")
               (commit (string-append "v" version))))
        (file-name (git-file-name name version))
        (sha256
-        (base32 "05rk6gy0xnaksxqdkpm08i3ngh0adavfyfjyscw5l1b7d7yhfavh"))))
+        (base32 "1lsf8wm10wq67lmwz1ck30inl3byfy27ya39fj93gym5ys815ma6"))))
     (build-system gnu-build-system)
     (arguments
      (list
@@ -1069,7 +1069,7 @@ characterization result in a liberty library file.")
 (define-public kicad
   (package
     (name "kicad")
-    (version "10.0.0")
+    (version "10.0.1")
     (source (origin
               (method git-fetch)
               (uri (git-reference
@@ -1077,7 +1077,7 @@ characterization result in a liberty library file.")
                     (commit version)))
               (sha256
                (base32
-                "1470x1276yvd8li3w25zjg73fkpl2qp4dsx7adanafq5c4l47rmc"))
+                "1mnlv8fyz03pfg8pkqwdl5gjz6vsk98c6414lf3wkvrkb85ljaav"))
               (file-name (git-file-name name version))))
     (build-system cmake-build-system)
     (arguments
@@ -1185,7 +1185,9 @@ characterization result in a liberty library file.")
      "Kicad is a program for the formation of printed circuit
 boards and electrical circuits.  The software has a number of programs that
 perform specific functions, for example, pcbnew (Editing PCB), eeschema (editing
-electrical diagrams), gerbview (viewing Gerber files) and others.")
+electrical diagrams), gerbview (viewing Gerber files) and others.  To use
+SQLite-backed database libraries, install the optional @code{sqliteodbc}
+package.")
     (license license:gpl3+)))
 
 (define-public kicad-doc
@@ -1200,7 +1202,7 @@ electrical diagrams), gerbview (viewing Gerber files) and others.")
               (file-name (git-file-name name version))
               (sha256
                (base32
-                "1k0ayxsy0nnv9qxkii9yrxs7jx9y3wfjpsv5yl9wql3vdg3qay69"))))
+                "1c0vn13rp0z12rlqhl321pk2gj9577dyky6xj3i6hb040i3v7zrr"))))
     (build-system cmake-build-system)
     (arguments
      `(#:configure-flags (list "-DBUILD_FORMATS=html"
@@ -1232,7 +1234,7 @@ electrical diagrams), gerbview (viewing Gerber files) and others.")
               (file-name (git-file-name name version))
               (sha256
                (base32
-                "0khfnln0f2zsz5hy31nw2rr0nflb2z3s9n9f7g41g03m9l3s43v2"))))
+                "0iz4lb33wdsw4f82a0ln8ycgaf39gjws03mvl2j1q9npwj6xl1cm"))))
     (build-system cmake-build-system)
     (native-inputs (list python-wrapper))
     (arguments
@@ -1262,7 +1264,7 @@ libraries.")
               (file-name (git-file-name name version))
               (sha256
                (base32
-                "0ymmd1rzrczpvcqzw1mld9x8xhbka0vvjy3kdqwysg4ri97f5wrm"))))
+                "0jqgyi1yb2zc6w56ba7xama0wnhrqwbbnf2fqvr47xihvdcvs87v"))))
     (synopsis "Official KiCad footprint libraries")
     (description "This package contains the official KiCad footprint libraries.")))
 
@@ -1279,7 +1281,7 @@ libraries.")
               (file-name (git-file-name name version))
               (sha256
                (base32
-                "0k91iw661fpzb7saryjxdcdvk1kis7dhbcpzp7xzjk84i4jvxrp5"))))
+                "0jr70ry6inzc2fy3s300z0zlmihbq95ba1zckyd1wwbpplaj1gbl"))))
     (synopsis "Official KiCad 3D model libraries")
     (description "This package contains the official KiCad 3D model libraries.")))
 
@@ -1502,7 +1504,7 @@ an embedded event driven algorithm.")
 (define-public librelane
   (package
     (name "librelane")
-    (version "3.0.0")
+    (version "3.0.2")
     (source (origin
               (method git-fetch)
               (uri (git-reference
@@ -1511,7 +1513,7 @@ an embedded event driven algorithm.")
               (file-name (git-file-name name version))
               (sha256
                (base32
-                "01zi2v5qi26h09hwjafsq9k0anrc5g5fc6q5vg87k9lcwyfsi685"))))
+                "1v43adkw5c624nd06g11cb609v8pj3prfyyawbq3i4k1w1law597"))))
     (build-system pyproject-build-system)
     (arguments
      (list
@@ -2018,7 +2020,7 @@ which allows one to install the M8 firmware on any Teensy.")
 (define-public magic
   (package
     (name "magic")
-    (version "8.3.625")
+    (version "8.3.633")
     (source
      (origin
        (method git-fetch)
@@ -2027,7 +2029,7 @@ which allows one to install the M8 firmware on any Teensy.")
              (commit version)))
        (file-name (git-file-name name version))
        (sha256
-        (base32 "0ld238cdq8mzzcx7vgk67aqim0ypbfyks486z59q19yzxpr6c42s"))))
+        (base32 "1rwrhb0q99rpv4lbiw1sqykwzf9gj1my2wkh6mp8g36rab2vhii3"))))
     (build-system gnu-build-system)
     (arguments
      (list
@@ -2057,7 +2059,7 @@ versus schematic} tests and can assist with automatic routing.")
 (define-public mcy
   (package
     (name "mcy")
-    (version "0.63")
+    (version "0.64")
     (source
      (origin
        (method git-fetch)
@@ -2120,7 +2122,7 @@ coverage.")
 (define-public netgen
   (package
     (name "netgen")
-    (version "1.5.316")
+    (version "1.5.318")
     (source
      (origin
        (method git-fetch)
@@ -2129,7 +2131,7 @@ coverage.")
              (commit version)))
        (file-name (git-file-name name version))
        (sha256
-        (base32 "1923mynqw1wjhlcij639gdqrkifyb5lcks1x11gwpgp4gijwj3qb"))))
+        (base32 "19rd8y2pspycr2296nhm60fhsgnzlyzb09wx2kgqzg6s7h6cmrr5"))))
     (build-system gnu-build-system)
     (arguments
      (list
@@ -2690,20 +2692,20 @@ formats.")
 (define-public openroad
   (package
     (name "openroad")
-    (version "26Q1")
+    (version "26Q2")
     (source
      (origin
        (method git-fetch)
        (uri (git-reference
               (url "https://github.com/The-OpenROAD-Project/OpenROAD")
-              (commit "e06ca0f5f2e641cd7b138a4d9b4fdd290359eca8")
+              (commit version)
               ;; 26Q1 Uses:
-              ;; - forked, custom opensta: v2.2.0-1579-g9c9b5659
+              ;; - forked, custom opensta: v2.2.0-1952-g43177bba
-              ;; - forked, custom (berkeley) abc: 20260104.1628-g4c756ffb8
+              ;; - forked, custom (berkeley) abc: 20260301.0445-g17cadca08
               (recursive? #t)))
        (file-name (git-file-name name version))
        (sha256
-        (base32 "13x4kqi4j489k4sz56ws4aqhp60nff1i18z6hjd6xx8y7flaik0c"))))
+        (base32 "152j78c47wyq4sw42bwlxdhvs5g47a8jqz1qz5yzdsk9z5y4y7vl"))))
     (build-system qt-build-system)
     (arguments
      (list
@@ -2737,7 +2739,7 @@ formats.")
            flex
            googletest
            pkg-config
-           swig-4.0))
+           swig-4.4))
     (inputs
      (list abseil-cpp
            boost
@@ -2776,7 +2778,6 @@ clock tree synthesis, routing, parasitic extraction, and timing analysis.")
   (package
     (inherit openroad)
     (name "openroad-cli")
-    (build-system cmake-build-system)
     (arguments
      (delkw
       #:qtbase
@@ -3460,7 +3461,7 @@ form of AXI, AXI lite, and AXI stream modules.")
 (define-public python-edalize
   (package
     (name "python-edalize")
-    (version "0.6.5")
+    (version "0.6.6")
     (source
      (origin
        (method git-fetch)
@@ -3469,7 +3470,7 @@ form of AXI, AXI lite, and AXI stream modules.")
              (commit (string-append "v" version))))
        (file-name (git-file-name name version))
        (sha256
-        (base32 "1drmc126a12zlynx8ps9iwghaqs058pqj2xpdysxnrj26hg3sp15"))))
+        (base32 "115nc15n2cx4x9irjim07zkg0287418djqd6ja7rm8jrnyldvln9"))))
     (build-system pyproject-build-system)
     (arguments
      (list
@@ -3496,17 +3497,17 @@ form of AXI, AXI lite, and AXI stream modules.")
     (native-inputs
      (list python-pytest python-setuptools python-setuptools-scm))
     (propagated-inputs
-     (list python-importlib-metadata python-jinja2))
+     (list python-importlib-metadata python-jinja2 python-pandas))
     (home-page "https://github.com/olofk/edalize/")
     (synopsis "Python Library for interacting with EDA tools")
     (description
-     "This package implements a functionality to create project files for
+     "This package can create project files for supported tools and run them in
-supported tools and run them in batch or GUI mode.  All EDA tools such as
+batch or GUI mode.  All EDA tools such as Icarus, Yosys, ModelSim, Vivado,
-Icarus, Yosys, ModelSim, Vivado, Verilator, GHDL, Quartus etc get input HDL
+Verilator, GHDL, Quartus etc get input HDL files (Verilog and VHDL) and some
-files (Verilog and VHDL) and some tool-specific files (constraint files,memory
+tool-specific files (constraint files,memory initialization files, IP
-initialization files, IP description files etc).  Together with the files,
+description files etc).  Together with the files, perhaps a couple of Verilog
-perhaps a couple of Verilog `defines, some top-level parameters/generics or
+`defines, some top-level parameters/generics or some tool-specific options are
-some tool-specific options are set.")
+set.")
     (license license:bsd-2)))
 
 (define-public fusesoc
@@ -3793,7 +3794,7 @@ to enforce it.")
 (define-public python-vunit
   (package
     (name "python-vunit")
-    (version "5.0.0-dev.9") ;v4.7.0 dates back from 2 years ago.
+    (version "5.0.0-dev.10") ;v4.7.0 dates back from 2 years ago.
     (source
      (origin
        (method git-fetch)
@@ -3802,7 +3803,7 @@ to enforce it.")
               (commit (string-append "v" version))))
        (file-name (git-file-name name version))
        (sha256
-        (base32 "1j9rvlshzi4mdy7wah1j8ri63drkjb47xly22q40wvl2xp2ghqgs"))))
+        (base32 "1gr9ghwgqly9zf0sf15ai20sac520rs84b9i5qjxdqpj26ayyl1q"))))
     (build-system pyproject-build-system)
     (arguments
      (list
@@ -4000,7 +4001,7 @@ input and outputs an XML dataset.")
 (define-public qucs-s
   (package
     (name "qucs-s")
-    (version "25.2.0")                  ;update qucsator-rf accordingly
+    (version "26.1.0")                  ;update qucsator-rf accordingly
     (source
      (origin
        (method git-fetch)
@@ -4010,7 +4011,7 @@ input and outputs an XML dataset.")
        (file-name (git-file-name name version))
        (sha256
         (base32
-         "0328irynm8vy4xjdip5286fd8nag1zdp0p6rcbhdhp4fca6wp5ak"))))
+         "0aiyrcrxln4v6qm2dmigb54wl0mj499q3g18pz87m1s2lfgicpb1"))))
     (build-system qt-build-system)
     (arguments
      (list
@@ -4232,7 +4233,7 @@ them usable as simple logic analyzer and/or oscilloscope hardware.")
 (define-public sby
   (package
     (name "sby")
-    (version "0.63")
+    (version "0.64")
     (source
      (origin
        (method git-fetch)
@@ -4241,7 +4242,7 @@ them usable as simple logic analyzer and/or oscilloscope hardware.")
              (commit (string-append "v" version))))
        (file-name (git-file-name name version))
        (sha256
-        (base32 "1p23w9jd95b86n7f94zpqdaz19fn2b2lyww1p8dcy9p3zrcn7750"))))
+        (base32 "0jksspdgq2grk4a80i5yfc9bazfij37wpmrlkvygpz9ys5ny1432"))))
     (build-system gnu-build-system)
     (arguments
      (list
@@ -4290,8 +4291,8 @@ front-end program for Yosys-based formal hardware verification flows.")
     (license license:isc)))
 
 (define-public sby-gui
-  (let ((commit "6c977084c17c4842c504829c6d455a07d67e119c")
+  (let ((commit "0a89301bf347c9f42932186e49ba2c0014ff3661")
-        (revision "0"))
+        (revision "1"))
     (package
       (name "sby-gui")
       (version (git-version "0" revision commit))
@@ -4303,10 +4304,13 @@ front-end program for Yosys-based formal hardware verification flows.")
                 (commit commit)))
          (file-name (git-file-name name version))
          (sha256
-          (base32 "137x3s5mwbzlcv2p6671ijvbafzwhxpvszzfi9wifq0wcli6cxxg"))))
+          (base32 "1zp2c7zqclsfvl5xhb8zlc1dclp2s36w2nd0x80fazsxp7ksw5gr"))))
       (build-system qt-build-system)
       (arguments
-       (list #:tests? #f))               ;no tests
+       (list
+        #:qtbase qtbase                 ;for Qt 6
+        #:tests? #f))                   ;no tests
+      (native-inputs (list python-minimal-wrapper))
       (propagated-inputs (list sby))
       (home-page "https://github.com/YosysHQ/sby-gui/")
       (synopsis "Graphical user interface for code{sby}")
@@ -4661,7 +4665,7 @@ parallel computing platforms.  It also supports serial execution.")
 (define-public yosys
   (package
     (name "yosys")
-    (version "0.63")
+    (version "0.64")
     (source
      (origin
        (method git-fetch)
@@ -4669,7 +4673,7 @@ parallel computing platforms.  It also supports serial execution.")
               (url "https://github.com/YosysHQ/yosys")
               (commit (string-append "v" version))))
        (sha256
-        (base32 "1iaafzsc0pbd61m5hh12nzr2z4rn4n7i68l6ij9vli4m5zsxw39k"))
+        (base32 "13gw5msk1kv05jkb330nybvx2s0ixm6l6mdpyapnqmv3lkhby1mj"))
        (file-name (git-file-name name version))))
     (build-system gnu-build-system)
     (outputs '("out" "doc"))
@@ -4782,12 +4786,12 @@ parallel computing platforms.  It also supports serial execution.")
               (git-reference
                 (url "https://github.com/povik/yosys-slang")
                 ;; No tags, nor releases.
-                (commit "d82b0b163a725fc1a401fbb6b465cd862517ec1f")
+                (commit "4e53d772996184b07e9bfe784060f96e6cb0a267")
                 (recursive? #t)))  ;requires slang and fmt
              (file-name "yosys-slang")
              (sha256
               (base32
-               "07h4qssphggd4mbn376vldqwzj1i16y1ix455xzr4lgx6s2q9ryg")))))
+               "1jjr1b6xd1sr9fkyfyl4y2wkzl51m7g10bw97mnw81v2mzssrs2q")))))
     ;; Optional dependencies increase considerably package closure.
     ;; - gtkwave: required only for vcd2fst binary, used by ‘sim’ command.
     ;; - graphviz, xdot: used by ‘show’ command to display schematics.

gnu/packages/elixir.scm

@@ -164,7 +164,8 @@ Mix.CLI.main()"
                        '("ERL_LIBS" prefix ("${GUIX_ELIXIR_LIBS}"))))
                    programs))))))))
     (outputs '("out" "src"))
-    (inputs (list bash-minimal erlang rebar3 git))
+    (inputs (list bash-minimal erlang rebar3))
+    (native-inputs (list git-minimal))
     (native-search-paths
      (list (search-path-specification
             (variable "GUIX_ELIXIR_LIBS")

gnu/packages/emacs.scm

@@ -644,32 +644,6 @@ editor (console only)")
     (description "This Emacs build implements graphical UI purely in terms
 of GTK.")))
 
-(define-public emacs-xwidgets
-  (package/inherit emacs
-    (name "emacs-xwidgets")
-    (synopsis "The extensible, customizable, self-documenting text
-editor (with xwidgets support)")
-    (arguments
-     (substitute-keyword-arguments arguments
-       ((#:configure-flags flags #~'())
-        #~(cons "--with-xwidgets" #$flags))))
-    (inputs
-     (modify-inputs inputs
-       (prepend webkitgtk-with-libsoup2 libxcomposite)))))
-
-(define-public emacs-pgtk-xwidgets
-  (package
-    (inherit emacs-pgtk)
-    (name "emacs-pgtk-xwidgets")
-    (synopsis "Emacs text editor with @code{xwidgets} and @code{pgtk} support")
-    (arguments
-     (substitute-keyword-arguments arguments
-       ((#:configure-flags flags #~'())
-        #~(cons "--with-xwidgets" #$flags))))
-    (inputs
-     (modify-inputs inputs
-       (prepend gsettings-desktop-schemas webkitgtk-with-libsoup2)))))
-
 (define-public emacs-lucid
   (package/inherit emacs-no-x
     (name "emacs-lucid")
@@ -774,7 +748,6 @@ editor (with wide ints)" )
 
 (define-public emacs-next (emacs->emacs-next emacs))
 (define-public emacs-next-pgtk (emacs->emacs-next emacs-pgtk))
-(define-public emacs-next-pgtk-xwidgets (emacs->emacs-next emacs-pgtk-xwidgets))
 (define-deprecated-package emacs-next-tree-sitter
   emacs-next)
 

gnu/packages/embedded.scm

@@ -65,6 +65,7 @@
   #:use-module (gnu packages libffi)
   #:use-module (gnu packages libftdi)
   #:use-module (gnu packages libusb)
+  #:use-module (gnu packages linux)
   #:use-module (gnu packages messaging)
   #:use-module (gnu packages ncurses)
   #:use-module (gnu packages perl)
@@ -1505,7 +1506,8 @@ hardware.  The utility support USB and UART as serial link.")
                  (apply (assoc-ref cargo:%standard-phases phase)
                         #:cargo-target #$(cargo-triplet)
                         args))
-               '(unpack-rust-crates
+               '(prepare-rust-crates
+                 unpack-rust-crates
                  configure
                  check-for-pregenerated-files
                  patch-cargo-checksums)))))))
@@ -1900,7 +1902,7 @@ PicoBlaze; and Zilog Z80 families, plus many of their variants.")
     (inputs
      (list readline ucsim))
     (native-inputs
-     (list bison boost flex python-2 texinfo zlib))
+     (list bison boost flex python-minimal-wrapper texinfo zlib))
     (home-page "https://sdcc.sourceforge.net/")
     (synopsis "C compiler suite for 8-bit microcontrollers")
     (description "SDCC is a retargetable, optimizing Standard C compiler suite
@@ -2066,26 +2068,27 @@ operations.")
     (license license:asl2.0)))
 
 (define-public ts4900-utils
-  ;; There are no proper release nor tag; use the latest commit.
+  (package
-  (let ((revision "0")
+    (name "ts4900-utils")
-        (commit "e10a12f8050d1d1229e711c7cfab8a0d5d93ee58"))
+    (version "3.0.0")
-    (package
+    (source (origin
-      (name "ts4900-utils")
+              (method git-fetch)
-      (version (git-version "0.0.0" revision commit))
+              (uri (git-reference
-      (source (origin
+                     (url "https://github.com/embeddedTS/ts4900-utils")
-                (method git-fetch)
+                     (commit (string-append "v" version))))
-                (uri (git-reference
+              (file-name (git-file-name name version))
-                      (url "https://github.com/embeddedTS/ts4900-utils")
+              (sha256
-                      (commit commit)))
+               (base32
-                (file-name (git-file-name name version))
+                "08x40ii56v4cmnz9hk6rvjrc500k1bij5ns52360vczznc8lx8bx"))))
-                (sha256
+    (build-system gnu-build-system)
-                 (base32
+    (native-inputs
-                  "1vr8i425qijbwgbc10av3wr35p3x11wy6y442w0ja0yny7si8wp8"))))
+     (list autoconf
-      (build-system gnu-build-system)
+           automake
-      (native-inputs (list autoconf automake))
+           libgpiod
-      (home-page "https://github.com/embeddedTS/ts4900-utils")
+           pkg-config))
-      (synopsis "Utilities for the TS-4900 board family")
+    (home-page "https://github.com/embeddedTS/ts4900-utils")
-      (description "This package contains utilities useful for boards of the
+    (synopsis "Utilities for the TS-4900 board family")
+    (description "This package contains utilities useful for boards of the
 TS-4900 family.  The included commands are:
 @itemize @code
 @item adc8390
@@ -2098,7 +2101,7 @@ TS-4900 family.  The included commands are:
 @item tsmicroupdate
 @item tssilomon
 @end itemize")
-      (license license:bsd-2))))
+    (license license:bsd-2)))
 
 (define-public cc-tool
   (package

gnu/packages/emulators.scm

@@ -6,7 +6,7 @@
 ;;; Copyright © 2015, 2018, 2023 David Thompson <dthompson2@worcester.edu>
 ;;; Copyright © 2016 Manolis Fragkiskos Ragkousis <manolis837@gmail.com>
 ;;; Copyright © 2016, 2017, 2018, 2020 Efraim Flashner <efraim@flashner.co.il>
-;;; Copyright © 2017-2024 Nicolas Goaziou <mail@nicolasgoaziou.fr>
+;;; Copyright © 2017-2024, 2026 Nicolas Goaziou <mail@nicolasgoaziou.fr>
 ;;; Copyright © 2017, 2020, 2021 Tobias Geerinckx-Rice <me@tobias.gr>
 ;;; Copyright © 2017, 2018, 2019 Rutger Helling <rhelling@mykolab.com>
 ;;; Copyright © 2019 Pierre Neidhardt <mail@ambrevar.xyz>
@@ -3247,14 +3247,14 @@ that compiles to WebAssembly.")
 (define-public scummvm
   (package
     (name "scummvm")
-    (version "2.9.1")
+    (version "2026.2.0")
     (source
      (origin
        (method url-fetch)
        (uri (string-append "https://downloads.scummvm.org/frs/scummvm/" version
                            "/scummvm-" version ".tar.xz"))
        (sha256
-        (base32 "1qspqawdazsxisxm1lxzgi0i4gx54qd10xyk3nmmirwxz9mg70ka"))))
+        (base32 "1wv0z9c4dnjywgla9zhbkgnzahj829ybvcx9jw67hdmagnbys42f"))))
     (build-system gnu-build-system)
     (arguments
      (list

gnu/packages/engineering.scm

@@ -50,6 +50,7 @@
 ;;; Copyright © 2026 Cayetano Santos <csantosb@inventati.org>
 ;;; Copyright © 2026 Daniel Khodabakhsh <d@niel.khodabakh.sh>
 ;;; Copyright © 2026 Spencer King <spencer.king@wustl.edu>
+;;; Copyright © 2026 Brent Wedderburn <mb@bean.za.net>
 ;;;
 ;;; This file is part of GNU Guix.
 ;;;
@@ -135,6 +136,7 @@
   #:use-module (gnu packages imagemagick)
   #:use-module (gnu packages javascript)
   #:use-module (gnu packages jupyter)
+  #:use-module (gnu packages icu4c)
   #:use-module (gnu packages kde-frameworks)
   #:use-module (gnu packages libcanberra)
   #:use-module (gnu packages libevent)
@@ -252,13 +254,21 @@ their devices.")
           (replace 'build (assoc-ref gnu:%standard-phases 'build))
           (replace 'check (assoc-ref gnu:%standard-phases 'check))
           (replace 'install
-            (lambda* (#:key outputs #:allow-other-keys)
+            (lambda _
-              (let ((bin   (string-append #$output "/bin"))
+              (let* ((bin (string-append #$output "/bin"))
-                    (share (string-append #$output "/share/librecad")))
+                     (share (string-append #$output "/share"))
+                     (apps (string-append share "/applications"))
+                     (icons (string-append share "/icons/hicolor/128x128/apps")))
                 (mkdir-p bin)
                 (install-file "unix/librecad" bin)
                 (mkdir-p share)
-                (copy-recursively "unix/resources" share)))))))
+                (copy-recursively "unix/resources"
+                                  (string-append share "/librecad"))
+                (mkdir-p apps)
+                (install-file "desktop/librecad.desktop" apps)
+                (mkdir-p icons)
+                (copy-file "librecad/res/main/librecad.png"
+                           (string-append icons "/librecad.png"))))))))
     (inputs
      (list bash-minimal boost muparser freetype qtbase-5 qtsvg-5))
     (native-inputs
@@ -2720,16 +2730,17 @@ dynamics is used by FreeCAD 1.0.0 for its new Assembly workbench.")
 (define-public freecad
   (package
     (name "freecad")
-    (version "1.0.2")
+    (version "1.1.1")
     (source
      (origin
        (method git-fetch)
        (uri (git-reference
              (url "https://github.com/FreeCAD/FreeCAD")
-             (commit version)))
+             (commit version)
+             (recursive? #t)))          ;needed for the AddonManager
        (file-name (git-file-name name version))
        (sha256
-        (base32 "1zyz473fzrz9h073wp4k65qq4bkhqsp245nsv6nv186sl78l99xa"))
+        (base32 "05dx7ifx33705mxb0vc82j0mzzkazakgadfgq5bws30qrxp49xgg"))
        (snippet
         #~(begin
             (use-modules (guix build utils))
@@ -2746,7 +2757,7 @@ dynamics is used by FreeCAD 1.0.0 for its new Assembly workbench.")
       #:configure-flags
       #~(list
          "-DBUILD_FLAT_MESH:BOOL=ON"
-         "-DBUILD_ENABLE_CXX_STD:STRING=C++17"
+         "-DBUILD_ENABLE_CXX_STD:STRING=C++20"  ; FreeCAD 1.1 requires C++20
          "-DENABLE_DEVELOPER_TESTS=OFF"  ;; see the above: #:tests? comment
          "-DFREECAD_QT_VERSION=6"  ;; Build with Qt6
          "-DFREECAD_USE_EXTERNAL_ONDSELSOLVER=ON"  ;; unbundle ondsel-solver
@@ -2768,12 +2779,13 @@ dynamics is used by FreeCAD 1.0.0 for its new Assembly workbench.")
      (list c++-gsl
            doxygen
            graphviz
+           pybind11
            qttools
            pkg-config
-           swig-4.0))
+           swig-4.4))
     (inputs
      (list bash-minimal
-           boost-1.83
+           boost
            coin3d
            double-conversion
            eigen
@@ -2783,6 +2795,7 @@ dynamics is used by FreeCAD 1.0.0 for its new Assembly workbench.")
            gl2ps
            glew
            hdf5-1.10
+           icu4c
            jsoncpp
            libarea
            libjpeg-turbo
@@ -2805,13 +2818,11 @@ dynamics is used by FreeCAD 1.0.0 for its new Assembly workbench.")
            python-ply
            python-pyside-6
            python-pyyaml
-           python-shiboken-6
            python-wrapper
            qtsvg
            qtwebchannel
            qtwebengine
            qtwayland
-           qtx11extras
            sqlite
            onetbb                       ;same version as opencascade-occt
            vtk-9.5

gnu/packages/fabric-management.scm

@@ -186,7 +186,7 @@ testing InfiniBand networks.")
 (define-public ucx
   (package
     (name "ucx")
-    (version "1.19.0")
+    (version "1.20.0")
     (source (origin
               (method git-fetch)
               (uri (git-reference
@@ -196,7 +196,7 @@ testing InfiniBand networks.")
               (patches (search-patches "ucx-tcp-iface-ioctl.patch"))
               (sha256
                (base32
-                "12j9200iyg6d0yr84r25hcpq8qqzfaa08klbhvgrqpflpfcljz4z"))
+                "12w1mxacml1w8zvl1hpn786cs77y056b9hxv7q1kq482bgc2si0v"))
               (snippet
                ;; As seen in commit b0a275a5492125a13020cd095fe9934e0b5e7c6a.
                #~(begin (use-modules (guix build utils))

gnu/packages/fcitx5.scm

@@ -34,6 +34,7 @@
   #:use-module (gnu packages anthy)
   #:use-module (gnu packages boost)
   #:use-module (gnu packages compression)
+  #:use-module (gnu packages cpp)
   #:use-module (gnu packages curl)
   #:use-module (gnu packages datastructures)
   #:use-module (gnu packages dictionaries)
@@ -95,7 +96,7 @@ client.")
 (define-public fcitx5
   (package
     (name "fcitx5")
-    (version "5.1.16")
+    (version "5.1.19")
     (source
      (origin
        (method url-fetch)
@@ -103,9 +104,14 @@ client.")
              "https://download.fcitx-im.org/fcitx5/fcitx5/fcitx5-"
              version "_dict.tar.zst"))
        (sha256
-        (base32 "0lwp90wjrkiws121rqn9kzdz6p1ncsk18dkmbv0zi37yqx2mv180"))))
+        (base32 "1ngsadqdrwy99w63dmk493gg56j7r991v6pq1nwkx6apib9ykpc0"))
+       (snippet
+        #~(begin
+            (use-modules (guix build utils))
+            (delete-file-recursively "third_party")))))
     (arguments
-     (list #:configure-flags #~(list "-DUSE_SYSTEMD=OFF")))
+     (list #:configure-flags #~(list "-DUSE_SYSTEMD=OFF"
+                                     "-DUSE_SYSTEM_YOGA=ON")))
     (build-system cmake-build-system)
     (inputs
      (list cairo
@@ -118,12 +124,12 @@ client.")
            gettext-minimal
            glib
            iso-codes/pinned
-           json-c
            libevent
            libuv
            libxcb
            libxkbcommon
            libxkbfile
+           nlohmann-json
            pango
            `(,util-linux "lib")         ;For libuuid.
            wayland
@@ -132,7 +138,8 @@ client.")
            xcb-util
            xcb-util-keysyms
            xcb-util-wm
-           xkeyboard-config))
+           xkeyboard-config
+           yoga))
     (native-inputs
      (list extra-cmake-modules
            zstd
@@ -141,6 +148,11 @@ client.")
      (list (search-path-specification
             (variable "FCITX_ADDON_DIRS")
             (files '("lib/fcitx5")))
+           (search-path-specification
+            (variable "GUIX_GTK2_IM_MODULE_FILE")
+            (file-type 'regular)
+            (separator #f)
+            (files '("lib/gtk-2.0/2.10.0/immodules-gtk2.cache")))
            (search-path-specification
             (variable "GUIX_GTK3_IM_MODULE_FILE")
             (file-type 'regular)
@@ -154,7 +166,7 @@ client.")
 (define-public fcitx5-lua
   (package
     (name "fcitx5-lua")
-    (version "5.0.15")
+    (version "5.0.16")
     (source
      (origin
        (method url-fetch)
@@ -162,7 +174,7 @@ client.")
              "https://download.fcitx-im.org/fcitx5/fcitx5-lua/fcitx5-lua-"
              version ".tar.zst"))
        (sha256
-        (base32 "1yp5z97m8n7fwvxps1gn8pflg69j3yawgabz36bpd4wl43zkgchg"))))
+        (base32 "1zjiyadhqq8hijjv09khyj2shaw3ri4jgmb1ql67w9366wd0ykj2"))))
     (build-system cmake-build-system)
     (arguments
      (list
@@ -171,7 +183,7 @@ client.")
     (inputs
      (list fcitx5 lua gettext-minimal))
     (native-inputs
-     (list extra-cmake-modules))
+     (list extra-cmake-modules pkg-config))
     (home-page "https://github.com/fcitx/fcitx5-lua")
     (synopsis "Lua support for Fcitx 5")
     (description "Fcitx5-lua allows writing Fcitx5 extension in Lua.")
@@ -180,14 +192,14 @@ client.")
 (define-public libime
   (package
     (name "libime")
-    (version "1.1.12")
+    (version "1.1.14")
     (source
      (origin
        (method url-fetch)
        (uri (string-append "https://download.fcitx-im.org/fcitx5/libime/libime-"
                            version "_dict.tar.zst"))
        (sha256
-        (base32 "02n6xbbxfckzx5sqrclnh4cvqlnj9c5rpys07kd8r8m51paqzigq"))))
+        (base32 "17r54fd6whvcxn389k4ah9mj1fc61zgama5nhiv1ilx40n1hnnpv"))))
     (build-system cmake-build-system)
     (inputs
      (list fcitx5 boost (list zstd "lib")))
@@ -202,7 +214,7 @@ editors.")
 (define-public fcitx5-gtk
   (package
     (name "fcitx5-gtk")
-    (version "5.1.4")
+    (version "5.1.6")
     (source
      (origin
        (method url-fetch)
@@ -210,7 +222,7 @@ editors.")
                            "/fcitx5-gtk/fcitx5-gtk-"
                            version ".tar.zst"))
        (sha256
-        (base32 "0lwl17mbfm3pxpd3y7h4sxf77npr16hyzygrc7a6v26bx6ycbkqx"))))
+        (base32 "0qj5gjdnrxcyz6a455b4379iwnzazw5a6c6dyk6wz0d2bgainc75"))))
     (build-system cmake-build-system)
     (arguments
      (list
@@ -324,7 +336,7 @@ IM module for GTK+3 applications.
 (define-public fcitx5-qt
   (package
     (name "fcitx5-qt")
-    (version "5.1.11")
+    (version "5.1.13")
     (source
      (origin
        (method url-fetch)
@@ -332,7 +344,7 @@ IM module for GTK+3 applications.
                            "/fcitx5-qt/fcitx5-qt-"
                            version ".tar.zst"))
        (sha256
-        (base32 "0mc396zfafs34jraj9fdk0wyzvdzg4xi605rhrd492xcpf25b59v"))))
+        (base32 "1yawhwnycrqp1flik3hc2vskvsyjfm6rkcdhsqnawix22r2n1wl0"))))
     (build-system cmake-build-system)
     (arguments
      (list #:configure-flags
@@ -363,7 +375,7 @@ for Qt based application.")
 (define-public fcitx5-anthy
   (package
     (name "fcitx5-anthy")
-    (version "5.1.8")
+    (version "5.1.10")
     (source
      (origin
        (method url-fetch)
@@ -371,7 +383,7 @@ for Qt based application.")
                            "/fcitx5-anthy/fcitx5-anthy-"
                            version ".tar.zst"))
        (sha256
-        (base32 "1kv930nxz6q8ijb319fnnkzdyigbi36f2cwijnv4sy3rd0nykxrv"))))
+        (base32 "11h7b687xj2k1hp7dqj6wh5y6i55cm8m5pqbi5vbflgg0cy5v1mp"))))
     (build-system cmake-build-system)
     (arguments
      `(#:tests? #f)) ;; no tests
@@ -387,7 +399,7 @@ the Anthy input method.")
 (define-public fcitx5-skk
   (package
     (name "fcitx5-skk")
-    (version "5.1.8")
+    (version "5.1.10")
     (source
      (origin
        (method git-fetch)
@@ -396,14 +408,14 @@ the Anthy input method.")
              (commit version)))
        (file-name (git-file-name name version))
        (sha256
-        (base32 "11h6y7rv6yppp7iy8csy7r2pi2mlnjgl8h4h8ghfwab1gm7v32fn"))))
+        (base32 "1fjiyx6dyiqxlypr1k4024lnc077xsnx4qwrwx9hj3yjdni5f2p0"))))
     (build-system cmake-build-system)
     (arguments
      (list #:tests? #f      ; no tests
            #:configure-flags
-           #~(list (string-append "-DSKK_DEFAULT_PATH="
+           #~(list (string-append "-DSKK_PATH="
                                   #$(this-package-input "skk-jisyo")
-                                  "/share/skk/SKK-JISYO.L"))))
+                                  "/share/skk"))))
     (native-inputs
      (list extra-cmake-modules gobject-introspection
            pkg-config gettext-minimal))
@@ -423,14 +435,14 @@ backend.")
 (define-public fcitx5-unikey
   (package
     (name "fcitx5-unikey")
-    (version "5.1.8")
+    (version "5.1.10")
     (source (origin
               (method git-fetch)
               (uri (git-reference
                     (url "https://github.com/fcitx/fcitx5-unikey")
                     (commit version)))
               (sha256
-               (base32 "1nai5v6r367iwj8yxg4flv41my57l88l9vy0id9wr3hvrvls9v31"))
+               (base32 "1ddg5648r8jbdr8khawfhl26020snvrlgjwppw5rlh4iw3a4m143"))
               (file-name (git-file-name name version))))
     (build-system qt-build-system)
     (arguments
@@ -450,14 +462,14 @@ backend.")
 (define-public fcitx5-chewing
   (package
     (name "fcitx5-chewing")
-    (version "5.1.9")
+    (version "5.1.11")
     (source (origin
               (method git-fetch)
               (uri (git-reference
                     (url "https://github.com/fcitx/fcitx5-chewing")
                     (commit version)))
               (sha256
-               (base32 "1mgpxvmxfbqy8gymdsdmspgknh0pc751dm5rsrvdvfbd5lsa6pn6"))
+               (base32 "1x4a4vcb7vg9dx0f2bjrb2v6dcr8cwxnm8gdd47fkxqn890rgrnc"))
               (file-name (git-file-name name version))))
     (build-system cmake-build-system)
     (arguments
@@ -479,7 +491,7 @@ backend.")
 (define-public fcitx5-chinese-addons
   (package
     (name "fcitx5-chinese-addons")
-    (version "5.1.10")
+    (version "5.1.12")
     (source
      (origin
        (method url-fetch)
@@ -487,7 +499,7 @@ backend.")
                            "/fcitx5-chinese-addons/fcitx5-chinese-addons-"
                            version "_dict.tar.zst"))
        (sha256
-        (base32 "11gnywigqys3gndb175nxk10k1ld3xvwd6kggqnxs95imc2004dd"))))
+        (base32 "09kk8r6pcxjhivwv4z5cdv2pqy0ry8ngnfbrcmwagzyq2jq9p2cr"))))
     (build-system cmake-build-system)
     (arguments
      (list #:configure-flags
@@ -540,7 +552,7 @@ including input methods previous bundled inside Fcitx 4:
 (define-public fcitx5-configtool
   (package
     (name "fcitx5-configtool")
-    (version "5.1.11")
+    (version "5.1.13")
     (source
      (origin
        (method url-fetch)
@@ -548,7 +560,7 @@ including input methods previous bundled inside Fcitx 4:
              "https://download.fcitx-im.org/fcitx5"
              "/fcitx5-configtool/fcitx5-configtool-" version ".tar.zst"))
        (sha256
-        (base32 "1c5pw6p33z7lyk16jr1w72snazdc4q83ywn0gsk68qgmmfql5qr1"))))
+        (base32 "1sr8ri68qbkgvnj9pr5yw680zq506h26ymfmyz7ihw5ri14a6klr"))))
     (build-system qt-build-system)
     (arguments
      (list #:qtbase qtbase
@@ -661,7 +673,7 @@ for Fcitx 5 with following color variants:
 (define-public fcitx5-rime
   (package
     (name "fcitx5-rime")
-    (version "5.1.12")
+    (version "5.1.13")
     (source (origin
               (method url-fetch)
               (uri (string-append "https://download.fcitx-im.org/fcitx5"
@@ -669,7 +681,7 @@ for Fcitx 5 with following color variants:
                                   ".tar.zst"))
               (sha256
                (base32
-                "1blqfk8zpzd5v2r7gwjy12jbnsh26pcvad8q4mmhlg5j10yppg03"))))
+                "03wcdgdhkvw5341vjv3idyksykm65y0873vkcrsi16dsp8w0h7i8"))))
     (build-system cmake-build-system)
     (arguments
      '(#:tests? #f ;no tests
@@ -700,7 +712,7 @@ output.")
 (define-public fcitx5-hangul
   (package
     (name "fcitx5-hangul")
-    (version "5.1.7")
+    (version "5.1.9")
     (source
      (origin
        (method git-fetch)
@@ -709,7 +721,7 @@ output.")
              (commit version)))
        (file-name (git-file-name name version))
        (sha256
-        (base32 "02lkbwg25jr4hazjyxcy69midfsmxc0ksbdrfwbmqcfa3kz5d9gb"))))
+        (base32 "0ja5faara4xz8waccpa5gbi3prh02hh3gpf915czhbkihffby6ng"))))
     (build-system cmake-build-system)
     (native-inputs (list extra-cmake-modules pkg-config gettext-minimal))
     (inputs (list fcitx5 libhangul))

gnu/packages/file-systems.scm

@@ -88,6 +88,7 @@
   #:use-module (gnu packages golang-build)
   #:use-module (gnu packages golang-check)
   #:use-module (gnu packages golang-crypto)
+  #:use-module (gnu packages golang-web)
   #:use-module (gnu packages golang-xyz)
   #:use-module (gnu packages guile)
   #:use-module (gnu packages haskell-xyz)
@@ -761,7 +762,7 @@ from a mounted file system.")
   ;; completions by running a native bcachefs binary at build time.
   (package
     (name "bcachefs-tools-minimal")
-    (version "1.35.1")
+    (version "1.37.4")
     (source
      (origin
        (method git-fetch)
@@ -770,7 +771,7 @@ from a mounted file system.")
              (commit (string-append "v" version))))
        (file-name (git-file-name name version))
        (sha256
-        (base32 "1jn7fqlvhr0iazfx31wamvmf3qmgrzlf9ghvz8qazk8b6ipv77fn"))))
+        (base32 "17041jphzbg0ppxlc1acr3d73zyn02spjvi5my30wak8xh9n6nan"))))
     (build-system cargo-build-system)
     (arguments
      (list
@@ -968,20 +969,13 @@ minimal bcachefs-tools package.  It is meant to be used in initrds.")
 (define-public bcachefs-linux-module
   (package
     (name "bcachefs-linux-module")
-    (version "1.35.1")
+    (version (package-version bcachefs-tools-minimal))
-    (source
+    (source (package-source bcachefs-tools-minimal))
-     (origin
-       (method git-fetch)
-       (uri (git-reference
-             (url "https://evilpiepirate.org/git/bcachefs-tools.git")
-             (commit (string-append "v" version))))
-       (file-name (git-file-name name version))
-       (sha256
-        (base32 "1jn7fqlvhr0iazfx31wamvmf3qmgrzlf9ghvz8qazk8b6ipv77fn"))))
     (build-system linux-module-build-system)
     (arguments
      (list
-      #:tests? #f ;no 'check' target
+      #:make-flags #~(list "BCACHEFS_DKMS=1")
+      #:tests? #f                       ;no 'check' target
       #:source-directory "build/src/fs/bcachefs"
       #:phases
       #~(modify-phases %standard-phases
@@ -990,18 +984,14 @@ minimal bcachefs-tools package.  It is meant to be used in initrds.")
               (with-output-to-file ".version"
                 (lambda ()
                   (display #$version)))))
-          (add-after 'unpack 'patch-source
+          (add-before 'configure 'prepare-build-directory
-            (lambda _
+            (lambda* (#:key make-flags #:allow-other-keys)
-              (substitute* "Makefile"
+              (apply invoke "make" "install_dkms"
-                ;; Remove unnecessary dependencies
+                     (string-append "DESTDIR="
-                (("^.*PKG_CONFIG.*$")
+                                    (getcwd) "/")
-                 ""))))
+                     "DKMSDIR=build/"
-          (add-before 'configure 'prepare-build-dir
+                     make-flags))))))
-            (lambda _
+    (home-page (package-home-page bcachefs-tools-minimal))
-              (invoke "make" "install_dkms"
-                      (string-append "DESTDIR="
-                                     (getcwd) "/") "DKMSDIR=build/"))))))
-    (home-page (package-home-page bcachefs-tools-minimal/static))
     (synopsis "Bcachefs Linux kernel module")
     (description
      "This package provides the Linux kernel module for Bcachefs.
@@ -2140,10 +2130,79 @@ the XDG directory specification from @file{~/.@var{name}} to
 @file{~/.config/@var{name}}.")
       (license license:gpl2+))))
 
+(define-public s5cmd
+  (package
+    (name "s5cmd")
+    (version "2.3.0")
+    (source
+     (origin
+       (method git-fetch)
+       (uri (git-reference
+              (url "https://github.com/peak/s5cmd")
+              (commit (string-append "v" version))))
+       (file-name (git-file-name name version))
+       (sha256
+        (base32 "1y1bwma6f68j00jfdjxvw5flp9l4cdys7dgkrr0yvfz68lk9a17v"))
+       (snippet
+        #~(begin (use-modules (guix build utils))
+                 (delete-file-recursively "vendor")))))
+    (build-system go-build-system)
+    (arguments
+     (list
+      #:install-source? #f
+      #:import-path "github.com/peak/s5cmd/v2"
+      #:test-flags
+      #~(list "-vet=off"
+              ;; cp_test.go:74: assertion failed: text/plain; charset=utf-8
+              ;; (tc.expectedContentType string) != text/html; charset=utf-8
+              ;; (string)
+              "-skip" "TestGuessContentType")
+      #:test-subdirs
+      ;; build flag -mod=vendor only valid when using modules
+      ;; /<...>/peak/s5cmd/v2/e2e/util_test.go:417 +0x3b9
+      ;; /<...>/peak/s5cmd/v2/e2e/main_test.go:12 +0x65
+      #~(list "command/..."
+              "orderedwriter/..."
+              "progressbar/..."
+              "storage/..."
+              "storage/url/..."
+              "strutil/...")
+      #:phases
+      #~(modify-phases %standard-phases
+	  (add-after 'install 'rename-binaries
+	    (lambda _
+	      (rename-file
+	       (string-append #$output "/bin/v2")
+	       (string-append #$output "/bin/s5cmd")))))))
+    (native-inputs
+     (list go-github-com-aws-aws-sdk-go
+           go-github-com-cheggaaa-pb-v3
+           go-github-com-google-go-cmp
+           go-github-com-hashicorp-go-multierror
+           go-github-com-iancoleman-strcase
+           go-github-com-igungor-gofakes3
+           go-github-com-karrick-godirwalk
+           go-github-com-kballard-go-shellquote
+           go-github-com-lanrat-extsort-1.0.2
+           go-github-com-termie-go-shutil
+           go-github-com-urfave-cli-v2
+           go-go-uber-org-mock
+           go-gotest-tools-v3
+           go-honnef-co-go-tools
+           go-mvdan-cc-unparam))
+    (home-page "https://github.com/peak/s5cmd")
+    (synopsis "Parallel S3 and local filesystem execution tool")
+    (description
+     "@code{s5cmd} is a fast S3 and local filesystem execution tool.  It comes
+with support for a multitude of operations including tab completion and
+wildcard support for files, which can be handy for object storage workflow
+while working with large number of files.")
+    (license license:expat)))
+
 (define-public squashfuse
   (package
     (name "squashfuse")
-    (version "0.1.105")
+    (version "0.6.1")
     (source
      (origin
        (method git-fetch)
@@ -2152,7 +2211,7 @@ the XDG directory specification from @file{~/.@var{name}} to
              (commit version)))
        (file-name (git-file-name name version))
        (sha256
-        (base32 "03aw8pw8694jyrzpnbry05rk9718sqw66kiyq878bbb679gl7224"))))
+        (base32 "16ds2xlk6hb5cggi6di8s0aalir3mrx7rk24rw5daad1xw4dbq0y"))))
     (build-system gnu-build-system)
     (arguments
      (list
@@ -2190,7 +2249,8 @@ memory-efficient.")
                  (install-file "fuseprivate.h"
                                (string-append #$output
                                               "/include/squashfuse/")))))))))
-    (inputs (list fuse-for-appimage
+    (inputs (list `(,fuse "out")
+                  `(,fuse "static")
                   `(,zstd "lib")
                   `(,zstd "static")
                   `(,zlib "out")

gnu/packages/finance.scm

@@ -766,7 +766,7 @@ require Coincurve.")
 (define-public electrum
   (package
     (name "electrum")
-    (version "4.7.1")
+    (version "4.7.2")
     (source
      (origin
        (method git-fetch)
@@ -775,7 +775,7 @@ require Coincurve.")
               (commit version)))
        (file-name (git-file-name name version))
        (sha256
-        (base32 "171jbap3khzwkyxg730sasfj01qiip396sgyiwr1i6yq5fxd23pi"))))
+        (base32 "05y3w9jhpfxd7frzlilqvsfggrgfzcml2spc2qb5xx9j4q62hnmx"))))
     (build-system pyproject-build-system)
     (arguments
      (list

gnu/packages/flashing-tools.scm

@@ -2,7 +2,7 @@
 ;;; Copyright © 2014 Mark H Weaver <mhw@netris.org>
 ;;; Copyright © 2014 Manolis Fragkiskos Ragkousis <manolis837@gmail.com>
 ;;; Copyright © 2016 Hartmut Goebel <h.goebel@crazy-compilers.com>
-;;; Copyright © 2016, 2018, 2021 Ludovic Courtès <ludo@gnu.org>
+;;; Copyright © 2016, 2021 Ludovic Courtès <ludo@gnu.org>
 ;;; Copyright © 2016, 2019 Efraim Flashner <efraim@flashner.co.il>
 ;;; Copyright © 2017 Jonathan Brielmaier <jonathan.brielmaier@web.de>
 ;;; Copyright © 2017 Julien Lepiller <julien@lepiller.eu>
@@ -84,7 +84,6 @@
   #:use-module (gnu packages linux)
   #:use-module (gnu packages mtools)
   #:use-module (gnu packages pciutils)
-  #:use-module (gnu packages pciutils)
   #:use-module (gnu packages perl)
   #:use-module (gnu packages pkg-config)
   #:use-module (gnu packages python)
@@ -524,162 +523,6 @@ Loke and Heimdall communicate via the custom Samsung-developed protocol typicall
 referred to as the \"Odin 3 protocol\".")
     (license license:expat)))
 
-(define-public ifdtool
-  (package
-    (name "ifdtool")
-    (version "25.09")
-    (source
-     (origin
-       (method git-fetch)
-       (uri (git-reference
-              (url "https://review.coreboot.org/coreboot")
-              (commit version)))
-       (file-name (git-file-name name version))
-       (sha256
-        (base32
-         "1a1n64dwr5fzdnaj45bjci85ap5yra5gwz4x056zn6481xwvbsmv"))))
-    (build-system gnu-build-system)
-    (arguments
-     (list
-      #:make-flags
-      #~(list (string-append "CC=" #$(cc-for-target))
-              "INSTALL=install"
-              (string-append "PREFIX=" #$output))
-      #:phases
-      #~(modify-phases %standard-phases
-          (add-after 'unpack 'chdir
-            (lambda _
-              (chdir "util/ifdtool")))
-          (delete 'configure))           ; no configure script
-      #:tests? #f))                    ; no test suite
-    (home-page "https://doc.coreboot.org/util/ifdtool/")
-    (synopsis "Intel Firmware Descriptor dumper")
-    (description "This package provides @command{ifdtool}, a program to
-dump Intel Firmware Descriptor data of an image file.")
-    (license license:gpl2)))
-
-(define-public bincfg
-  (package
-    (name "bincfg")
-    (version "25.09")
-    (source
-     (origin
-       (method git-fetch)
-       (uri (git-reference
-              (url "https://review.coreboot.org/coreboot")
-              (commit version)))
-       (file-name (git-file-name name version))
-       (sha256
-        (base32
-         "1a1n64dwr5fzdnaj45bjci85ap5yra5gwz4x056zn6481xwvbsmv"))))
-    (build-system gnu-build-system)
-    (arguments
-     (list
-      #:tests? #f ; no test suite
-      #:make-flags
-      #~(list
-         (string-append "CC=" #$(cc-for-target)))
-      #:phases
-      #~(modify-phases %standard-phases
-          (delete 'configure) ; no configure script
-          (add-after 'unpack 'chdir
-            (lambda _
-              (chdir "util/bincfg")))
-          (add-after 'build 'build-binaries
-            (lambda* (#:key make-flags #:allow-other-keys)
-              (for-each
-               (lambda (target result)
-                 (apply invoke "make" (string-append "gen-" target) make-flags)
-                 (rename-file result
-                              (string-append target ".bin")))
-               (list
-                ;; generate GbE for X200
-                "gbe-ich9m"
-                ;; generate GbE for X220/x230
-                "gbe-82579LM"
-                ;; generate IFD for X200
-                "ifd-x200")
-               (list
-                "flashregion_3_gbe.bin"
-                "flashregion_3_gbe.bin"
-                "flashregion_0_fd.bin"))))
-          ;; The Makefile has no install target.
-          (replace 'install
-            (lambda _
-              (let ((bin (string-append #$output "/bin"))
-                    (lib (string-append #$output "/lib/bincfg"))
-                    (data (string-append #$output "/share/bincfg")))
-                ;; Install the program
-                (install-file "bincfg" bin)
-                ;; And its data
-                (for-each
-                 (lambda (path)
-                   (install-file path data))
-                 (append (find-files "." ".*\\.set")
-                         (find-files "." ".*\\.spec")))
-                ;; And the files generated with the data
-                (for-each
-                 (lambda (path)
-                   (install-file path lib))
-                 (find-files "." ".*\\.bin"))))))))
-    (native-inputs (list bison flex))
-    (home-page "https://coreboot.org")
-    (synopsis "Encoder/decoder for binary formats described in text files")
-    (description "
-The bincfg program comes with specifications files for the following binary
-formats:
-@itemize
-@item Various DDR3 and DDR4 SPD
-@item Configuration data for the Intel 82579LM Gigabit Ethernet PHY
-@item Configuration data for the Intel Gigabit Ethernet controller present in
-      the Intel ICH9-M chipset.
-@item Intel Firmware Descriptor data for the Lenovo ThinkPad X200
-@item Configuration data for the ITE IT8718F SuperIO
-@end itemize
-It also comes with example files generated by bincfg.")
-    (license license:gpl3+)))
-
-(define-public intelmetool
-  (package
-    (name "intelmetool")
-    (version "25.09")
-    (source (origin
-              (method git-fetch)
-              (uri (git-reference
-                    (url "https://review.coreboot.org/coreboot")
-                    (commit version)))
-              (file-name (git-file-name name version))
-              (sha256
-               (base32
-                "1a1n64dwr5fzdnaj45bjci85ap5yra5gwz4x056zn6481xwvbsmv"))))
-    (build-system gnu-build-system)
-    (arguments
-     (list
-      #:tests? #f                       ;no test suite
-      #:make-flags
-      #~(list (string-append "CC=" #$(cc-for-target))
-              "INSTALL=install"
-              (string-append "PREFIX=" #$output))
-      #:phases
-      #~(modify-phases %standard-phases
-          (add-after 'unpack 'chdir
-            (lambda _
-              (chdir "util/intelmetool")))
-          (delete 'configure) ;no configure script
-          (delete 'check))))
-    (inputs (list pciutils zlib))
-    (home-page
-     "https://github.com/coreboot/coreboot/tree/main/util/intelmetool/")
-    (synopsis "Intel Management Engine tools")
-    (description "This package provides tools for working with Intel
-Management Engine (ME).  You need to @code{sudo rmmod mei_me} and
-@code{sudo rmmod mei} before using this tool.  Also pass
-@code{iomem=relaxed} to the Linux kernel command line.")
-    (license license:gpl2)
-
-    ;; This is obviously an Intel thing, plus it requires <cpuid.h>.
-    (supported-systems '("x86_64-linux" "i686-linux"))))
-
 (define-public me-cleaner
   (package
     (name "me-cleaner")

gnu/packages/fltk.scm

@@ -52,6 +52,7 @@
       (uri (git-reference
               (url "https://github.com/fltk/fltk")
               (commit (string-append "release-" version))))
+      (file-name (git-file-name name version))
       (sha256
        (base32 "0pnifyhhvcqfjd6iaa4m14kvfyqhjjdw0aqbcizcdhhqrl6q4pjg"))))
    (build-system gnu-build-system)

gnu/packages/fonts.scm

@@ -5559,6 +5559,39 @@ technical and idiosyncratic feel—perfect for headers and pull-quotes.  Made to
 work well together with Mona Sans.")
     (license license:silofl1.1)))
 
+(define-public font-open-sans
+  (package
+    (name "font-open-sans")
+    (version "3.003")
+    (source
+     (origin
+       (method git-fetch)
+       (uri (git-reference
+             (url "https://github.com/googlefonts/opensans")
+             (commit "bd7e37632246368c60fdcbd374dbf9bad11969b6")))
+       (file-name (git-file-name name version))
+       (sha256
+        (base32 "1mlnybaci1cr8z5xzxm7l2xpwfq27x9hqv649hc2ni1cjsyhpjp8"))))
+    (build-system font-build-system)
+    (arguments
+     (list
+      #:phases
+      #~(modify-phases %standard-phases
+          (replace 'install
+            (lambda* (#:key outputs #:allow-other-keys)
+              ;; Install the variable fonts only.
+              (let ((%install (assoc-ref %standard-phases 'install)))
+                (with-directory-excursion "fonts/variable"
+                  (%install #:outputs outputs))))))))
+    (home-page "https://github.com/googlefonts/opensans")
+    (synopsis "Humanist sans-serif typeface by Steve Matteson")
+    (description
+     "Open Sans is an open source humanist sans-serif typeface
+that was designed by Steve Matteson under commission from Google.  It was
+released in 2011 and is based on his earlier design called Droid Sans, which
+was specifically created for Android mobile devices but with slight
+modifications to its width.")
+    (license license:silofl1.1)))
 
 (define-public font-peppercarrot
   (package

gnu/packages/fortran-xyz.scm

@@ -28,7 +28,8 @@
   #:use-module (gnu packages libffi)
   #:use-module (gnu packages maths)
   #:use-module (gnu packages pkg-config)
-  #:use-module (gnu packages python))
+  #:use-module (gnu packages python)
+  #:use-module (gnu packages python-build))
 
 ;;; Please: Try to add new module packages in alphabetic order.
 ;;;
@@ -144,7 +145,7 @@ a.s.o.
 (define-public fortran-mctc-lib
   (package
     (name "fortran-mctc-lib")
-    (version "0.3.2")
+    (version "0.5.1")
     (source
      (origin
        (method git-fetch)
@@ -154,7 +155,7 @@ a.s.o.
        (file-name (git-file-name name version))
        (sha256
         (base32
-         "1gabdxllx2pcw1mbv4gw9zpn6817ikz9ql8xs9w86wswd6f0m5kl"))))
+         "1wp8apv0psl2hkhlrd5pgnhbxk8zpxa0ijkhcnb09klbxcsi8p5f"))))
     (build-system meson-build-system)
     (arguments
      (list
@@ -243,7 +244,7 @@ calculate partial charges used in the DFT-D4 model.")
 (define-public fortran-simple-dftd3
   (package
     (name "fortran-simple-dftd3")
-    (version "1.2.1")
+    (version "1.3.0")
     (source
      (origin
        (method git-fetch)
@@ -252,7 +253,7 @@ calculate partial charges used in the DFT-D4 model.")
               (commit (string-append "v" version))))
        (file-name (git-file-name name version))
        (sha256
-        (base32 "0aygmnax3vwz2x3ad7syksfjca4zc85nyslsibs0wg8wqfsmr33k"))))
+        (base32 "1602pwmxa8qjllgj7k9hq2bm4s838f6qzr7mpc0rbh28gm00c1fw"))))
     (build-system meson-build-system)
     (arguments
      (list
@@ -265,7 +266,8 @@ calculate partial charges used in the DFT-D4 model.")
      (list gfortran
            pkg-config
            python-minimal
-           python-cffi))
+           python-cffi
+           python-setuptools))
     (inputs
      (list fortran-mctc-lib
            fortran-mstore

gnu/packages/freedesktop.scm

@@ -1150,6 +1150,60 @@ GNOME Shell.  The @command{localectl} command-line tool allows you to interact
 with localed.  This package is extracted from the broader systemd package.")
     (license license:lgpl2.1+)))
 
+(define-public gardenhostd
+  (package
+   (name "gardenhostd")
+   (version "1.1")
+   (source (origin
+            (method git-fetch)
+            (uri (git-reference
+                  (url "https://codeberg.org/axtlos/gardenhostd.git")
+                  (commit (string-append "v" version))))
+            (file-name (git-file-name name version))
+            (sha256
+             (base32
+              "1q0pdh0imc2ggb26cddl62hx6fmz6z4hqj2352a4k9wxyn5kfiam"))))
+   (build-system meson-build-system)
+   (arguments
+    (list
+     #:imported-modules `(,@%meson-build-system-modules
+                          ,@%pyproject-build-system-modules)
+     #:modules '(((guix build pyproject-build-system) #:prefix pyproject:)
+                 (guix build meson-build-system)
+                 (guix build utils))
+     #:phases
+     #~(modify-phases %standard-phases
+         (add-after 'install 'remove-extra-files
+           (lambda _
+             (with-directory-excursion #$output
+               (delete-file-recursively "etc/init.d")
+               (rmdir "etc"))))
+         ;; See <https://codeberg.org/guix/guix/issues/7579>.
+         (add-after 'install 'wrap-search-paths
+           (lambda _
+             (wrap-program (string-append #$output "/libexec/gardenhostd")
+               `("GUIX_PYTHONPATH" prefix
+                 ,(map
+                   (lambda (package)
+                     (string-append
+                      package "/lib/python"
+                      (pyproject:python-version #$(this-package-input "python"))
+                      "/site-packages"))
+                   ;; Avoids references to meson’s libraries.
+                   (list #$(this-package-input "python")
+                         #$(this-package-input "python-pygobject"))))))))))
+   (inputs
+    (list bash-minimal
+          python
+          python-pygobject))
+   (home-page "https://codeberg.org/axtlos/gardenhostd")
+   (synopsis "Minimal Python implementation of systemd-hostnamed")
+   (description "This package is a partial implementation of the
+systemd-hostnamed daemon.  It provides the @code{org.freedesktop.hostname1}
+D-Bus interface, which helps applications like GNOME Settings retrieve and
+modify the system’s hostname, as well as set a pretty hostname for display.")
+   (license license:gpl3+)))
+
 (define-public packagekit
   (package
     (name "packagekit")
@@ -2862,7 +2916,7 @@ to the C library @code{uchardet} to increase performance.")
 (define-public udiskie
   (package
     (name "udiskie")
-    (version "2.6.1")
+    (version "2.6.2")
     (source
      (origin
        (method git-fetch)
@@ -2871,7 +2925,7 @@ to the C library @code{uchardet} to increase performance.")
               (commit (string-append "v" version))))
        (file-name (git-file-name name version))
        (sha256
-        (base32 "0ngr8sdzd32mxamzfh82ar8m40z52lx91339b7dq3in0cr5r1ynp"))))
+        (base32 "0zc23yf2sw1m21xkfbpfjzbp7xykqjwq56fr2nxzlc02n7g6iqgk"))))
     (build-system pyproject-build-system)
     (arguments
      (list

gnu/packages/games.scm

@@ -30,7 +30,7 @@
 ;;; Copyright © 2017, 2019, 2020 Marius Bakke <mbakke@fastmail.com>
 ;;; Copyright © 2017, 2018 Rutger Helling <rhelling@mykolab.com>
 ;;; Copyright © 2017 Roel Janssen <roel@gnu.org>
-;;; Copyright © 2017-2025 Nicolas Goaziou <mail@nicolasgoaziou.fr>
+;;; Copyright © 2017-2026 Nicolas Goaziou <mail@nicolasgoaziou.fr>
 ;;; Copyright © 2018 okapi <okapi@firemail.cc>
 ;;; Copyright © 2018 Tim Gesthuizen <tim.gesthuizen@yahoo.de>
 ;;; Copyright © 2018 Madalin Ionel-Patrascu <madalinionel.patrascu@mdc-berlin.de>
@@ -97,6 +97,7 @@
 ;;; Copyright © 2025 Aiden Isik <aidenisik+git@member.fsf.org>
 ;;; Copyright © 2026 Cayetano Santos <csantosb@inventati.org>
 ;;; Copyright © 2026 Carlos Durán Domínguez <wurt@wurt.eu>
+;;; Copyright © 2026 Nikita Alkhovik <forgoty13@gmail.com>
 ;;;
 ;;; This file is part of GNU Guix.
 ;;;
@@ -114,40 +115,32 @@
 ;;; along with GNU Guix.  If not, see <http://www.gnu.org/licenses/>.
 
 (define-module (gnu packages games)
-  #:use-module (ice-9 match)
+  #:autoload (gnu packages pascal) (fpc)
-  #:use-module ((guix licenses) #:prefix license:)
-  #:use-module (guix utils)
-  #:use-module (guix packages)
-  #:use-module (guix download)
-  #:use-module (guix git-download)
-  #:use-module (guix svn-download)
-  #:use-module (guix gexp)
-  #:use-module (gnu packages)
   #:use-module (gnu packages acl)
-  #:use-module (gnu packages adns)
+  #:use-module (gnu packages admin)
   #:use-module (gnu packages algebra)
+  #:use-module (gnu packages assembly)
+  #:use-module (gnu packages audio)
   #:use-module (gnu packages autotools)
+  #:use-module (gnu packages avahi)
   #:use-module (gnu packages backup)
   #:use-module (gnu packages base)
-  #:use-module (gnu packages build-tools)
-  #:use-module (gnu packages admin)
-  #:use-module (gnu packages audio)
-  #:use-module (gnu packages avahi)
-  #:use-module (gnu packages assembly)
   #:use-module (gnu packages bash)
   #:use-module (gnu packages bison)
   #:use-module (gnu packages boost)
+  #:use-module (gnu packages build-tools)
   #:use-module (gnu packages c)
   #:use-module (gnu packages check)
   #:use-module (gnu packages cmake)
-  #:use-module (gnu packages compression)
   #:use-module (gnu packages code)
+  #:use-module (gnu packages compression)
   #:use-module (gnu packages cpp)
-  #:use-module (gnu packages curl)
   #:use-module (gnu packages crypto)
+  #:use-module (gnu packages curl)
   #:use-module (gnu packages cyrus-sasl)
-  #:use-module (gnu packages documentation)
+  #:use-module (gnu packages dns)
   #:use-module (gnu packages docbook)
+  #:use-module (gnu packages documentation)
   #:use-module (gnu packages emacs)
   #:use-module (gnu packages emulators)
   #:use-module (gnu packages flex)
@@ -202,8 +195,8 @@
   #:use-module (gnu packages maths)
   #:use-module (gnu packages messaging)
   #:use-module (gnu packages mp3)
-  #:use-module (gnu packages music)
   #:use-module (gnu packages multiprecision)
+  #:use-module (gnu packages music)
   #:use-module (gnu packages ncurses)
   #:use-module (gnu packages netpbm)
   #:use-module (gnu packages networking)
@@ -212,7 +205,6 @@
   #:use-module (gnu packages oneapi)
   #:use-module (gnu packages opencl)
   #:use-module (gnu packages pcre)
-  #:autoload (gnu packages pascal) (fpc)
   #:use-module (gnu packages perl)
   #:use-module (gnu packages perl-check)
   #:use-module (gnu packages perl-compression)
@@ -230,9 +222,9 @@
   #:use-module (gnu packages readline)
   #:use-module (gnu packages regex)
   #:use-module (gnu packages ruby-xyz)
-  #:use-module (gnu packages shells)
   #:use-module (gnu packages sdl)
   #:use-module (gnu packages serialization)
+  #:use-module (gnu packages shells)
   #:use-module (gnu packages sqlite)
   #:use-module (gnu packages squirrel)
   #:use-module (gnu packages swig)
@@ -249,22 +241,31 @@
   #:use-module (gnu packages wget)
   #:use-module (gnu packages wxwidgets)
   #:use-module (gnu packages xdisorg)
-  #:use-module (gnu packages xorg)
   #:use-module (gnu packages xiph)
   #:use-module (gnu packages xml)
-  #:use-module (guix build-system copy)
+  #:use-module (gnu packages xorg)
+  #:use-module (gnu packages)
   #:use-module (guix build-system cmake)
+  #:use-module (guix build-system copy)
   #:use-module (guix build-system glib-or-gtk)
   #:use-module (guix build-system gnu)
   #:use-module (guix build-system go)
   #:use-module (guix build-system haskell)
   #:use-module (guix build-system meson)
   #:use-module (guix build-system perl)
-  #:use-module (guix build-system python)
   #:use-module (guix build-system pyproject)
+  #:use-module (guix build-system python)
   #:use-module (guix build-system qt)
   #:use-module (guix build-system scons)
   #:use-module (guix build-system trivial)
+  #:use-module (guix download)
+  #:use-module (guix gexp)
+  #:use-module (guix git-download)
+  #:use-module ((guix licenses) #:prefix license:)
+  #:use-module (guix packages)
+  #:use-module (guix svn-download)
+  #:use-module (guix utils)
+  #:use-module (ice-9 match)
   #:use-module ((srfi srfi-1) #:hide (zip))
   #:use-module (srfi srfi-26))
 
@@ -483,7 +484,7 @@ mouse and joystick control, and original music.")
       (source (origin
                 (method git-fetch)
                 (uri (git-reference
-                      (url "https://git.sr.ht/~drummyfish/Anarch")
+                      (url "https://gitlab.com/drummyfish/anarch")
                       (commit commit)))
                 (file-name (git-file-name name version))
                 (sha256
@@ -3964,7 +3965,7 @@ that beneath its ruins lay buried an ancient evil.")
 (define-public angband
   (package
     (name "angband")
-    (version "4.2.5")
+    (version "4.2.6")
     (source
      (origin
        (method git-fetch)
@@ -3973,7 +3974,7 @@ that beneath its ruins lay buried an ancient evil.")
              (commit version)))
        (file-name (git-file-name name version))
        (sha256
-        (base32 "0kg6npbfy42mhggsqvs04khc8198i980z52xm59pws29698qazaw"))
+        (base32 "0hgzdvlh0j42w4q9kch9xvhnbvcrypac01xhpksw35gj9my887cp"))
        (modules '((guix build utils)))
        (snippet
         ;; So, some of the sounds/graphics/tilesets are under different
@@ -3989,12 +3990,55 @@ that beneath its ruins lay buried an ancient evil.")
            (substitute* "lib/Makefile"
              ;; And don't try to invoke makefiles in the directories we removed.
              (("gamedata customize help screens fonts tiles sounds icons user")
-              "gamedata customize help screens user"))))))
+              "gamedata customize help screens user"))
+           ;; Remove nonfree .dll files too.
+           (delete-file-recursively "src/win")))))
     (build-system gnu-build-system)
     (arguments
-     `(#:tests? #f                      ; no check target
+     `(#:configure-flags (list (string-append "--bindir=" %output "/bin"))
-       #:configure-flags (list (string-append "--bindir=" %output "/bin"))))
+       #:phases
-    (native-inputs (list autoconf automake))
+       (modify-phases %standard-phases
+         (add-before 'build 'fix-infinite-loop-on-sighup
+           ;; XXX Release 4.2.6 has a major bug where sending the process a
+           ;; SIGHUP when closing the terminal causes it to infinite loop
+           ;; waiting for input: https://github.com/angband/angband/issues/6558
+           ;; Reevaluate for future versions.
+           (lambda _
+             (substitute* "src/ui-signals.c"
+               (("(SIGHUP, )SIG_IGN" _ first)
+                (string-append first "handle_signal_abort")))))
+         (add-before 'check 'skip-failing-tests
+           (lambda _
+             (let ((to-skip '(;; some of these may be fixable, but most try to
+                              ;; create a directory in the user's home directory.
+                              ;; Rather than reading environment variables, they
+                              ;; lookup the username using getpwnam(3) and manually
+                              ;; construct the string.
+                              ;; Generic "Suite died":
+                              "game/basic"
+                              "game/mage"
+                              ;; "Cannot create '//.angband/Angband'":
+                              "effects/chain"
+                              "effects/destruction"
+                              "effects/earthquake"
+                              "object/info"
+                              "object/slays"
+                              "player/calc-inventory"
+                              "player/combine-pack"
+                              "player/digging"
+                              "player/inven-carry-num"
+                              "player/inven-wield"
+                              "player/timed"
+                              ;; This file likes to read /etc/passwd
+                              "z-file/path-normalize")))
+               (substitute* "src/tests/Makefile"
+                 (("include \\$\\(SUITES\\)" all)
+                  (string-append all "\nTESTPROGS := $(filter-out "
+                                 (string-join to-skip " ")
+                                 ", $(TESTPROGS))")))))))))
+    (native-inputs (list autoconf
+                         automake
+                         perl)) ;for tests
     (inputs (list ncurses))
     (home-page "https://rephial.org/")
     (synopsis "Dungeon exploration roguelike")
@@ -4233,11 +4277,11 @@ interface or via an external visual interface such as GNU XBoard.")
                (("TestIOTouchDragAnywhere (test_integration)" all _) _))))
          (add-before 'bootstrap 'autoreconf
            (lambda _
-	     ;; automake is out of date in the source
+             ;; automake is out of date in the source
-	     ;; autoreconf updates the automake scripts
+             ;; autoreconf updates the automake scripts
-	     (invoke "autoreconf")
+             (invoke "autoreconf")
-	     ;; Build fails when autom4te.cache exists.
+             ;; Build fails when autom4te.cache exists.
-	     (delete-file-recursively "autom4te.cache")
+             (delete-file-recursively "autom4te.cache")
              #t))
          (add-after 'install 'delete-freedinkedit-desktop
            (lambda* (#:key outputs #:allow-other-keys)
@@ -4567,6 +4611,105 @@ for common mesh file formats, and collision detection.")
     (home-page "https://irrlicht.sourceforge.io/")
     (license license:zlib)))
 
+(define-public pegasus-frontend
+  (let ((commit "c3462e68bf3a178420b44f356998255f8d82a113")
+        (revision "weekly_2024w38"))
+    (package
+      (name "pegasus-frontend")
+      (version (git-version "0.0" revision commit))
+      (source
+       (origin
+         (method git-fetch)
+         (uri (git-reference
+               (url "https://github.com/mmatyas/pegasus-frontend")
+               (commit commit)))
+         (sha256
+          (base32 "1p350nlbif33mw5cbqxwli5yf47dxpransxlj2wp8xvh4w1rb3jx"))
+         (file-name (git-file-name name version))))
+      (build-system qt-build-system)
+      (arguments
+       (list
+        #:qtbase qtbase-5
+        #:make-flags
+        #~(list (string-append "INSTALL_DESKTOPDIR="
+                               #$output "/share/applications")
+                (string-append "INSTALL_ICONDIR="
+                               #$output "/share/icons/hicolor"))
+        #:phases
+        #~(modify-phases %standard-phases
+            (add-after 'unpack 'copy-modules
+              (lambda* (#:key inputs #:allow-other-keys)
+                (copy-recursively #$(this-package-native-input
+                                     "SortFilterProxyModel")
+                                  "./thirdparty/SortFilterProxyModel")
+                (copy-recursively #$(this-package-native-input
+                                     "pegasus-theme-grid")
+                                  "./src/themes/pegasus-theme-grid")
+                (copy-recursively #$(this-package-native-input
+                                     "pegasus-frontend-translations") "./lang")))
+            (add-before 'check 'prepare-test-env
+              (lambda* (#:key tests? #:allow-other-keys)
+                (when tests?
+                  (setenv "QT_QPA_PLATFORM" "offscreen")
+                  (setenv "QT_QUICK_BACKEND" "software"))))
+            (add-after 'qt-wrap 'gst-wrap
+              (lambda* (#:key inputs #:allow-other-keys)
+                (wrap-program (string-append #$output "/bin/pegasus-fe")
+                  `("GST_PLUGIN_PATH" suffix
+                    ,(search-path-as-list '("lib/gstreamer-1.0")
+                                          (map cdr inputs)))))))))
+      (inputs (list sdl2
+                    bash-minimal
+                    qtbase-5
+                    qtsvg-5
+                    qtdeclarative-5
+                    qtgraphicaleffects
+                    qtmultimedia-5
+                    qtgamepad-5
+                    gst-plugins-base
+                    gst-plugins-bad
+                    gst-plugins-good))
+      (native-inputs (list qttools-5
+                           (origin
+                             (method git-fetch)
+                             (uri (git-reference
+                                   (url
+                                    "https://github.com/mmatyas/pegasus-frontend-translations")
+                                   (commit
+                                    "46c7cecec745bdd4c61bfc7ecb967156ad208642")))
+                             (file-name "pegasus-frontend-translations")
+                             (sha256 (base32
+                                      "0rvlx199wdrjxr8pgibga556zf4njq4w2n31fdirqgb631rgyqxd")))
+                           (origin
+                             (method git-fetch)
+                             (uri (git-reference
+                                   (url
+                                    "https://github.com/mmatyas/pegasus-theme-grid")
+                                   (commit
+                                    "5951db6f2a4fe0db6a4fd6f00da1f280cadfa536")))
+                             (file-name "pegasus-theme-grid")
+                             (sha256 (base32
+                                      "1nfnq6lppdm9ni6jk48l1i7hk90m8w2p13swl5nr4zwczln8dbz1")))
+                           (origin
+                             (method git-fetch)
+                             (uri (git-reference
+                                   (url
+                                    "https://github.com/mmatyas/SortFilterProxyModel")
+                                   (commit
+                                    "2061f8136ba372fd06c1928a610258b7d88cb144")))
+                             (file-name "SortFilterProxyModel")
+                             (sha256 (base32
+                                      "16va8fcf7v6kfm8r9zym0516qrk4vlsy5wmpd3r3002wpz8q39h2")))))
+      (synopsis
+       "Graphical frontend for launching and managing game collection")
+      (description
+       "Pegasus is a graphical frontend for browsing your game library and
+  launching all kinds of games from the same place. It's focusing on
+  customizability, cross platform support (including embedded)
+  and high performance.")
+      (home-page "https://pegasus-frontend.org")
+      (license license:gpl3+))))
+
 (define-public mars
   ;; No official release since 2013: use the latest commit.
   (let ((commit   "84664cda094efe6e49d9b1550e4f4f98c33eefa2")
@@ -4905,7 +5048,7 @@ Protocol).")
 (define-public extremetuxracer
   (package
     (name "extremetuxracer")
-    (version "0.8.2")
+    (version "0.8.4")
     (source (origin
               (method url-fetch)
               (uri (string-append
@@ -4913,7 +5056,7 @@ Protocol).")
                     version "/etr-" version ".tar.xz"))
               (sha256
                (base32
-                "0knd22lzhzqih1w92y6m7yxha376c6ydl22wy4xm6jg2x5jlk1qw"))))
+                "1rbk8zqfzzk90znf3f5lqqa12j0n6pm2qgwzabzmlnkm1k68acps"))))
     (build-system gnu-build-system)
     (native-inputs
      (list pkg-config))
@@ -5378,7 +5521,7 @@ falling, themeable graphics and sounds, and replays.")
     (name "wesnoth")
     ;; Even-numbered minor versions indicate stable versions:
     ;; https://wiki.wesnoth.org/ReleasingWesnoth#Version_numbering
-    (version "1.18.6")
+    (version "1.18.7")
     (source (origin
               (method git-fetch)
               (uri (git-reference
@@ -5387,7 +5530,7 @@ falling, themeable graphics and sounds, and replays.")
               (file-name (git-file-name name version))
               (sha256
                (base32
-                "0cdlczxczqgzdaqwydb9gfgi7d9jc39li72p2rb5nk1rlgfff79s"))))
+                "0hdrp4xm9d8kj8id2g5q0wwdwykx4a0f1cs8a7fghmv0czryfv7f"))))
     (build-system cmake-build-system)
     (arguments
      (list #:tests? #f                  ;no test target
@@ -6606,7 +6749,7 @@ in-window at 640x480 resolution or fullscreen.")
 (define-public warzone2100
   (package
     (name "warzone2100")
-    (version "4.6.1")
+    (version "4.6.3")
     (source (origin
               (method url-fetch)
               (uri (string-append "mirror://sourceforge/warzone2100/releases/"
@@ -6622,7 +6765,7 @@ in-window at 640x480 resolution or fullscreen.")
                                  "inih" "re2" "utf8proc" "utfcpp")))))
               (sha256
                 (base32
-                  "02x5ihkpfkpjxwvh00d8yqzd796af7d684nk96hzhhq28qw5bb16"))))
+                  "0fmiy0pm56yy69c0nhynjdiaslwlfg8cdvfl5s78g5pzdi1y47s3"))))
     (build-system cmake-build-system)
     (arguments (list #:configure-flags #~'("-GNinja"
                                            "-DWZ_DISTRIBUTOR=Guix"
@@ -6659,7 +6802,7 @@ in-window at 640x480 resolution or fullscreen.")
                   opusfile
                   physfs
                   re2
-                  sdl2
+                  sdl3
                   sqlite
                   utf8proc
                   utfcpp
@@ -8148,7 +8291,7 @@ fish.  The whole game is accompanied by quiet, comforting music.")
 (define-public crawl
   (package
     (name "crawl")
-    (version "0.34.0")
+    (version "0.34.1")
     (source
      (origin
        (method git-fetch)
@@ -8157,7 +8300,7 @@ fish.  The whole game is accompanied by quiet, comforting music.")
              (commit version)))
        (file-name (git-file-name name version))
        (sha256
-        (base32 "16fsvrzcndrplw8zcn6nh8459x8zl5xdnf9r9hzh4ll2a4w9dkcr"))
+        (base32 "09x4n4w3rw8sldwprb03yg1igwh4m09iw00g2iq30466jryys6bv"))
        (patches (search-patches "crawl-upgrade-saves.patch"))))
     (build-system gnu-build-system)
     (inputs
@@ -9100,7 +9243,7 @@ elements to achieve a simple goal in the most complex way possible.")
 (define-public the-powder-toy
   (package
     (name "the-powder-toy")
-    (version "99.3.384")
+    (version "99.5.394")
     (source
      (origin
        (method git-fetch)
@@ -9109,7 +9252,7 @@ elements to achieve a simple goal in the most complex way possible.")
              (commit (string-append "v" version))))
        (file-name (git-file-name name version))
        (sha256
-        (base32 "0l067j0bbzvr0i2prxrgb0af4xdpl648x741jgnyp4bjzdbm61x7"))
+        (base32 "0wd0sg3lpl9xafyj76syvpdjh574cxjmxaf9kssfjjxs20y3hjn8"))
        (snippet
         #~(begin (use-modules (guix build utils))
                  (substitute* "meson.build"
@@ -10100,7 +10243,7 @@ your score gets higher, you level up and the blocks fall faster.")
                                      "-DES_USE_SYSTEM_LIBRARIES=1")
            #:make-flags #~(list (string-append "PREFIX=" #$output))
            #:build-type "Release"
-	   #:tests? (not (target-x86-32?))
+           #:tests? (not (target-x86-32?))
            #:phases
            #~(modify-phases %standard-phases
                (add-after 'unpack 'fix-paths
@@ -11084,7 +11227,7 @@ levels to unlock.")
 (define-public simgear
   (package
     (name "simgear")
-    (version "2024.1.4")
+    (version "2024.1.5")
     (source
      (origin
        (method git-fetch)
@@ -11096,7 +11239,7 @@ levels to unlock.")
               (commit version)))
        (file-name (git-file-name name version))
        (sha256
-        (base32 "1k855yxq06gv42f83c3k9hrsz05xxj6vi1c60227zm0dx3jkb4jq"))
+        (base32 "1ygdc8xkrj7qzm9zklibb1v5w3jp718707zmiwl8fn63sxanbqsq"))
        (modules '((guix build utils)))
        (snippet
         '(begin
@@ -11148,7 +11291,7 @@ and also provides the base for the FlightGear Flight Simulator.")
               (commit version)))
        (file-name (git-file-name name version))
        (sha256
-        (base32 "0xlpry1g5xci4qmj37rjk4sdhg9zada0vw6a047gsm7cq5p7pkxk"))
+        (base32 "0hpfvacnba2kcyjwm01lkrqkz0gccvljjil8b0ai42l38hxn5r5h"))
        (modules '((guix build utils)))
        (snippet
         '(begin
@@ -11232,12 +11375,12 @@ and also provides the base for the FlightGear Flight Simulator.")
        ("flightgear-data"
         ,(origin
            (method url-fetch)
-           (uri (string-append "mirror://sourceforge/flightgear/release-"
+           (uri (string-append "https://mirrors.ibiblio.org/flightgear/ftp/release-"
                                (version-major+minor version) "/"
                                "FlightGear-" version "-data.txz"))
            (sha256
             (base32
-             "0pgwxpm5cdm0y6klrmpqspmhmqsfxshz4jljw2kd4wy18fqzd1s6"))))))
+             "0d81yz9jqmg2jzw5rm769pl1j18pvh2mjkx61l13kw76ja8p6159"))))))
     (home-page "https://www.flightgear.org/")
     (synopsis "Flight simulator")
     (description "The goal of the FlightGear project is to create a
@@ -11312,46 +11455,33 @@ to remap axis and buttons and a way to calibrate joysticks.")
 (define-public jumpnbump
   (package
     (name "jumpnbump")
-    (version "1.61")
+    (version "1.70")
     (source (origin
               (method git-fetch)
               (uri (git-reference
-                    (url "https://gitlab.com/LibreGames/jumpnbump.git")
+                     (url "https://gitlab.com/LibreGames/jumpnbump.git")
-                    (commit version)))
+                     (commit version)))
               (file-name (git-file-name name version))
               (sha256
                (base32
-                "12lwl5sl5n009nb83r8l4lakb9286csqdf1ynpmwwydy17giqsdp"))))
+                "1irpssijxrfrjm023v642dl3aw4ldlv95fh073jlpdpl1mwqz71a"))))
     (build-system gnu-build-system)
     (arguments
-     `(#:make-flags
+     (list
-       (list "CC=gcc"
+      #:make-flags
-             (string-append "PREFIX=" (assoc-ref %outputs "out")))
+      #~(list (string-append "CC=" #$(cc-for-target))
-       #:tests? #f                      ;no test
+              (string-append "PREFIX=" #$output)
-       #:phases
+              "SYSINSTALL=1")
-       (modify-phases %standard-phases
+      #:tests? #f                       ;no test
-         ;; There is no configure script
+      #:phases
-         (replace 'configure
+      #~(modify-phases %standard-phases
-           (lambda _
+          (delete 'configure))))        ;no configure script
-             (substitute* "Makefile"
-               (("-funroll-loops")
-                "-funroll-loops -fcommon")
-               (("SDL_CFLAGS =")
-                "SDL_CFLAGS = -fcommon"))))
-         (add-after 'unpack 'fix-sdl-path
-           ;; XXX: For some reason, `sdl2-config' reports stand-alone SDL
-           ;; directory, not SDL-union provided as an input to the package.
-           ;; We force the latter with "--prefix=" option.
-           (lambda* (#:key inputs #:allow-other-keys)
-             (substitute* "Makefile"
-               (("sdl2-config" command)
-                (string-append command " --prefix=" (assoc-ref inputs "sdl")))))))))
     (inputs
-     `(("bzip2" ,bzip2)
+     (list bzip2
-       ("sdl" ,(sdl-union (list sdl2 sdl2-mixer sdl2-net)))
+           (sdl-union (list sdl2 sdl2-mixer sdl2-net))
-       ("zlib" ,zlib)))
+           zlib))
     (native-inputs
-     `(("gettext" ,gettext-minimal)))   ;for msgfmt
+     (list gettext-minimal))            ;for msgfmt
     (home-page "https://gitlab.com/LibreGames/jumpnbump")
     (synopsis "Multiplayer platform game with bunnies")
     (description "You, as a bunny, have to jump on your opponents to make them
@@ -11487,7 +11617,7 @@ player adaptability for character progression.")
 (define-public li-ri
   (package
     (name "li-ri")
-    (version "3.1.5")
+    (version "3.1.6")
     (source (origin
               (method git-fetch)
               (uri (git-reference
@@ -11496,7 +11626,7 @@ player adaptability for character progression.")
               (file-name (git-file-name name version))
               (sha256
                (base32
-                "1fd5hl9qhgvyix51la8sl34jzk4mcin8sai05gidy2r2grb1dy4s"))))
+                "09r6l0sbxp3q750kpbrx513yrafmg7a2769j4wgx812lsk92n3hg"))))
     (build-system cmake-build-system)
     (arguments
      (list #:tests? #false              ;no tests
@@ -12154,7 +12284,7 @@ for using any UCI engine and also to connect UCI engines to Lichess and IRC.")
         (base32 "1kkcnpkzgybm7rqg7nafd7sqd5m4alns6l4j5zcf3p41jdc9s3iv"))))
     (build-system glib-or-gtk-build-system)
     (inputs (list automake autoconf pkg-config intltool
-		  gettext-minimal libtool glib gtk+-2 boost))
+                  gettext-minimal libtool glib gtk+-2 boost))
     (arguments (list #:tests? #f))  ; No tests in source.
     (home-page "http://nine-mens-morris.net/downloads.html")
     (synopsis "Implementation of the board game Nine Men's Morris")
@@ -13378,8 +13508,8 @@ rules to solve permissions issues.")
 
 (define-public steam-devices-udev-rules
   ;; Last release from 2019-04-10
-  (let ((commit "13443480a64fe8f10676606bd57da6de89f8ccb1")
+  (let ((commit "7dde9ecb3c386363ecd9bd0a3b77e4756d200704")
-        (revision "1"))
+        (revision "2"))
     (package
       (name "steam-devices-udev-rules")
       (version (git-version "1.0.0.61" revision commit))
@@ -13391,7 +13521,7 @@ rules to solve permissions issues.")
                 (file-name (git-file-name name version))
                 (sha256
                  (base32
-                  "0i086gmnk93q76sw1laa9br6b7zj2r6nrrw7d64y4q9wcrlxw2bi"))))
+                  "0w0xkgi9fpvdbpl57f8fy2nwy2icm6iag39b8ifpkijlxgclx1p3"))))
       (build-system copy-build-system)
       (arguments
        '(#:install-plan '(("./" "lib/udev/rules.d"

gnu/packages/geo.scm

@@ -2936,7 +2936,7 @@ to the OSM opening hours specification.")
 (define-public josm
   (package
     (name "josm")
-    (version "19539")
+    (version "19555")
     (source (origin
               (method svn-fetch)
               (uri (svn-reference
@@ -2945,7 +2945,7 @@ to the OSM opening hours specification.")
                      (recursive? #f)))
               (sha256
                (base32
-                "05kslpvdwl4fldjzl6m2kmqvbmjv5yvipfavg01l30ywhw2c7v7v"))
+                "0kpshdj8kf9ag7h1qqrh9jqc6c9iv8v369mk60a8g7cbzf0xpblw"))
               (file-name (string-append name "-" version "-checkout"))
               (modules '((guix build utils)))
             (snippet

gnu/packages/gimp.scm

@@ -398,7 +398,8 @@ that is extensible via a plugin system.")
                         ;; environment, as it could cause Gimp to crash (see
                         ;; bug#77921).
                         `("GI_TYPELIB_PATH" prefix
-                          (,(getenv "GI_TYPELIB_PATH")))
+                          (,(getenv "GI_TYPELIB_PATH")
+                           ,(string-append #$output "/lib/girepository-1.0")))
                         `("GUIX_PYTHONPATH" prefix
                           (,(getenv "GUIX_PYTHONPATH")))
                         `("GDK_PIXBUF_MODULE_FILE" =

gnu/packages/gkrellm.scm

@@ -19,10 +19,12 @@
 ;;; along with GNU Guix.  If not, see <http://www.gnu.org/licenses/>.
 
 (define-module (gnu packages gkrellm)
+  #:use-module (guix build-system gnu)
+  #:use-module (guix download)
+  #:use-module (guix gexp)
   #:use-module ((guix licenses) #:prefix license:)
   #:use-module (guix packages)
-  #:use-module (guix download)
+  #:use-module (guix utils)
-  #:use-module (guix build-system gnu)
   #:use-module (gnu packages gettext)
   #:use-module (gnu packages gtk)
   #:use-module (gnu packages pkg-config)
@@ -31,32 +33,27 @@
 (define-public gkrellm
   (package
     (name "gkrellm")
-    (version "2.3.11")
+    (version "2.5.1")
     (source
      (origin
-      (method url-fetch)
+       (method url-fetch)
-      (uri (string-append "http://gkrellm.srcbox.net/releases/gkrellm-"
+       (uri (string-append "https://gkrellm.srcbox.net/releases/gkrellm-"
-                          version ".tar.bz2"))
+                           version ".tar.bz2"))
-      (sha256
+       (sha256
-       (base32 "01lccz4fga40isv09j8rjgr0qy10rff9vj042n6gi6gdv4z69q0y"))))
+        (base32 "0qvy2xmwmfy5f0g09yn9lr262shnx82ba04r5il2wj4qscg3r7h8"))))
     (build-system gnu-build-system)
-    (inputs
+    (inputs (list gtk+-2 libsm))
-     `(("gettext" ,gettext-minimal)
+    (native-inputs (list gettext-minimal pkg-config))
-       ("gtk+" ,gtk+-2)
-       ("libice" ,libice)
-       ("libsm" ,libsm)))
-    (native-inputs
-     (list pkg-config))
     (arguments
-     `(#:tests? #f                      ; there is no check target
+     (list
-       #:phases
+      #:tests? #f ;there is no check target
-       (modify-phases %standard-phases
+      #:phases
-         (delete 'configure))           ; no configure script
+      #~(modify-phases %standard-phases
-       #:make-flags
+          (delete 'configure)) ;no configure script
-       (let ((out (assoc-ref %outputs "out")))
+      #:make-flags
-         (list (string-append "INSTALLROOT=" out)
+      #~(list (string-append "INSTALLROOT=" #$output)
-               "CC=gcc"))))
+              (string-append "CC=" #$(cc-for-target)))))
-    (home-page "http://gkrellm.srcbox.net/")
+    (home-page "https://gkrellm.srcbox.net/")
     (synopsis "System monitors")
     (description
      "GKrellM is a single process stack of system monitors which supports

gnu/packages/gnome-circle.scm

@@ -39,6 +39,7 @@
   #:use-module (gnu packages bash)
   #:use-module (gnu packages check)
   #:use-module (gnu packages cmake)
+  #:use-module (gnu packages ebook)
   #:use-module (gnu packages enchant)
   #:use-module (gnu packages fonts)
   #:use-module (gnu packages freedesktop)
@@ -524,7 +525,8 @@ like automatic language detection, text-to-speech and clipboard buttons.")
                             #:vendor-dir "vendor"
                             #:cargo-target #$(cargo-triplet)
                             args))
-                   '(unpack-rust-crates
+                   '(prepare-rust-crates
+                     unpack-rust-crates
                      configure
                      check-for-pregenerated-files
                      patch-cargo-checksums))))))))
@@ -595,7 +597,8 @@ Transmission, and can be used to control remote Transmission instances.")
                         #:vendor-dir "vendor"
                         #:cargo-target #$(cargo-triplet)
                         args))
-               '(unpack-rust-crates
+               '(prepare-rust-crates
+                 unpack-rust-crates
                  configure
                  check-for-pregenerated-files
                  patch-cargo-checksums)))))))
@@ -679,7 +682,7 @@ and a high score table.")
 (define-public komikku
   (package
     (name "komikku")
-    (version "1.99.0")
+    (version "50.1.0")
     (source
      (origin
        (method git-fetch)
@@ -689,7 +692,7 @@ and a high score table.")
        (file-name (git-file-name name version))
        (sha256
         (base32
-         "1did8rh3aw6d3g1myavsma986rwashw09g3m442lv8fzmdiw18r4"))))
+         "0q858zvpqy32nb2lxdfy1k6fgal46kp634534fg983192fyk1pqp"))))
     (build-system meson-build-system)
     (arguments
      (list
@@ -738,8 +741,10 @@ and a high score table.")
            python-cloudscraper
            python-colorthief
            python-dateparser
+           python-ebooklib
            python-emoji
            python-keyring
+           python-jxlpy
            python-lxml
            python-magic
            python-natsort
@@ -775,7 +780,7 @@ developed with the aim of being used with the Librem 5 phone.")
 (define-public komikku-servers
   (package
     (name "komikku-servers")
-    (version "1.99.0")
+    (version "50.1.0")
     (source
      (origin
        (method git-fetch)
@@ -785,7 +790,7 @@ developed with the aim of being used with the Librem 5 phone.")
        (file-name (git-file-name name version))
        (sha256
         (base32
-         "1did8rh3aw6d3g1myavsma986rwashw09g3m442lv8fzmdiw18r4"))))
+         "0q858zvpqy32nb2lxdfy1k6fgal46kp634534fg983192fyk1pqp"))))
     (build-system copy-build-system)
     (arguments
      (list

gnu/packages/gnome-xyz.scm

@@ -1335,6 +1335,74 @@ animation of closing windowed applications.")
 GNOME Shell, including the top panel, dash and overview.")
     (license license:gpl3)))
 
+(define-public gnome-shell-extension-caffeine
+  (package
+    (name "gnome-shell-extension-caffeine")
+    (version "59")
+    (source
+     (origin
+       (method git-fetch)
+       (uri (git-reference
+             (url
+              "https://github.com/eonpatapon/gnome-shell-extension-caffeine")
+             (commit (string-append "v" version))))
+       (file-name (git-file-name name version))
+       (sha256
+        (base32 "0sv0iqfb6kjhgcg4pb59n91dyf667vax96kfhz5ik5hhx9n0z43w"))))
+    (build-system copy-build-system)
+    (arguments
+     (list
+      #:install-plan
+      #~'(("caffeine@patapon.info"
+           "share/gnome-shell/extensions/caffeine@patapon.info"
+           #:include-regexp ("icons" "locale" "preferences" "schemas"
+                             "\\.js(on)?$")))
+      #:phases
+      #~(modify-phases %standard-phases
+          (add-before 'install 'compile-schemas
+            (lambda _
+              (with-directory-excursion "caffeine@patapon.info/schemas"
+                (invoke "glib-compile-schemas" ".")))))))
+    (native-inputs (list `(,glib "bin")))
+    (synopsis "Disable screensaver and auto suspend in Gnome")
+    (description "This extension provides a quick setting toggle to enable or
+disable the Gnome auto-suspend and screensaver.")
+    (home-page "https://github.com/eonpatapon/gnome-shell-extension-caffeine")
+    (license license:gpl2+)))
+
+(define-public gnome-shell-extension-hot-edge
+  (package
+    (name "gnome-shell-extension-hot-edge")
+    (version "27")
+    (source
+     (origin
+       (method git-fetch)
+       (uri (git-reference
+             (url "https://github.com/jdoda/hotedge")
+             (commit "90e9cdd6f2a171a676a96a4e6ad0126316317e4d")))
+       (file-name (git-file-name name version))
+       (sha256
+        (base32 "08jqz6n04yvqa77930sghgip5qfj8i4dm8wsm5cqjc4sqm4pn9yy"))))
+    (build-system copy-build-system)
+    (arguments
+     (list
+      #:install-plan
+      #~'(("." "share/gnome-shell/extensions/hotedge@jonathan.jdoda.ca"
+           #:include-regexp ("\\.css$" "\\.js(on)?$" "schemas")))
+      #:phases
+      #~(modify-phases %standard-phases
+          (add-before 'install 'compile-schemas
+            (lambda _
+              (with-directory-excursion "schemas"
+                (invoke "glib-compile-schemas" ".")))))))
+    (native-inputs (list `(,glib "bin")))
+    (synopsis "Add a hot edge to the bottom of the screen in Gnome")
+    (description
+     "Add a hot edge that activates the overview to the bottom of the screen.
+This provides a better mouse-based workflow and can be an alternative to a dock.")
+    (home-page "https://github.com/jdoda/hotedge")
+    (license license:gpl2+)))
+
 (define-public gnome-shell-extension-radio
   (let ((commit "860e55b9e704eb3dde43e6bbeccec5748242498e")
         (revision "0"))

gnu/packages/gnome.scm

@@ -564,6 +564,7 @@ It is written in C using GObject and libsoup.")
     (arguments
      `(#:configure-flags
        (list
+        "CFLAGS=-g -O2 -Wno-error=incompatible-pointer-types"
         "--disable-static"
         "--enable-gtk-doc"
         (string-append "--with-html-dir="
@@ -2597,6 +2598,92 @@ of Evince is to replace the multiple document viewers that exist
 on the GNOME Desktop with a single simple application.")
     (license license:gpl2+)))
 
+(define-public papers
+  (package
+    (name "papers")
+    (version "50.0")
+    (source (origin
+              (method url-fetch)
+              (uri (string-append "mirror://gnome/sources/papers/"
+                                  (version-major version) "/"
+                                  "papers-" version ".tar.xz"))
+              (sha256
+               (base32 "01dws72fb19i9jwp3r0khr7ym2ns51fifdzafb5dcr5w8vmj06rh"))))
+    (build-system meson-build-system)
+    (arguments
+     (list
+      #:glib-or-gtk? #t
+      #:configure-flags
+      #~(list (string-append "-Dc_link_args=-Wl,-rpath=" #$output "/lib"))
+      #:imported-modules `(,@%meson-build-system-modules
+                           ,@%cargo-build-system-modules)
+      #:modules `(((guix build cargo-build-system) #:prefix cargo:)
+                  (guix build meson-build-system)
+                  (guix build utils))
+      #:phases
+      #~(modify-phases %standard-phases
+          (add-after 'unpack 'prepare-for-build
+            (lambda _
+              (substitute* "meson.build"
+                (("gtk_update_icon_cache: true")
+                 "gtk_update_icon_cache: false")
+                (("update_desktop_database: true")
+                 "update_desktop_database: false"))
+              (substitute* "meson.build"
+                (("'Cargo.lock',")
+                  ""))
+              (delete-file "Cargo.lock")))
+          (add-after 'configure 'prepare-cargo-build-system
+            (lambda args
+              (for-each
+               (lambda (phase)
+                 (format #t "Running cargo phase: ~a~%" phase)
+                 (apply (assoc-ref cargo:%standard-phases phase)
+                        #:vendor-dir "vendor"
+                        #:cargo-target #$(cargo-triplet)
+                        args))
+               '(unpack-rust-crates
+                 configure
+                 check-for-pregenerated-files
+                 patch-cargo-checksums))
+
+              (setenv "RUSTFLAGS"
+                      (string-append (or (getenv "RUSTFLAGS") "")
+                                     " -C link-arg=-Wl,-rpath,"
+                                     #$output "/lib")))))))
+    (native-inputs
+     (cons* blueprint-compiler
+            gettext-minimal
+            `(,glib "bin")
+            gobject-introspection
+            gi-docgen
+            itstool
+            pkg-config
+            rust
+            `(,rust "cargo")
+            (or (and=> (%current-target-system)
+                       (compose list make-rust-sysroot))
+                '())))
+    (inputs
+     (cons* appstream
+            djvulibre
+            exempi
+            gtk
+            libadwaita
+            libarchive
+            libspelling
+            libtiff
+            nautilus                    ; for nautilus extension
+            poppler-next
+            zlib
+            (cargo-inputs 'papers)))
+    (home-page "https://apps.gnome.org/Papers")
+    ;; TODO: drop “new” when updating to GNOME 49 or newer.
+    (synopsis "GNOME's new document viewer")
+    (description "Papers is a document viewer capable of displaying multiple
+and single page document formats like PDF and DejaVu.")
+    (license license:gpl2+)))
+
 (define-public gsettings-desktop-schemas
   (package
     (name "gsettings-desktop-schemas")
@@ -10541,7 +10628,6 @@ playing media, scanning, and much more.")
            cheese
            decibels
            epiphany
-           evince
            file-roller
            gnome-calculator
            gnome-calendar
@@ -10561,6 +10647,7 @@ playing media, scanning, and much more.")
            localsearch
            loupe
            nautilus
+           papers
            simple-scan
            showtime
            xdg-desktop-portal-gnome
@@ -11257,20 +11344,20 @@ basically a text box in which notes can be written.")
 (define-public gucharmap
   (let ((unicode-files
          '(("Blocks.txt"
-            "041sk54v6rjzb23b9x7yjdwzdp2wc7gvfz7ybavgg4gbh51wm8x1")
+            "05fbpc7miqpv7yic5xkm74ybzxkaf5r58ww21a1iwxqr3apyzvf0")
            ("DerivedAge.txt"
-            "04j92xp07v273z3pxkbfmi1svmw9kmnjl9nvz9fv0g5ybk9zk7r6")
+            "160r7wwidj3c2jl4cw3am0c5d0l7qndis9xx38h0y8fwidvdzv7q")
            ("NamesList.txt"
-            "0vsq8gx7hws8mvxy3nlglpwxw7ky57q0fs09d7w9xgb2ylk7fz61")
+            "1x1smmn2kmy8clf6ny2njln75i888lidckc6ssyp2gdhgasdrkhd")
            ("Scripts.txt"
-            "18c63hx4y5yg408a8d0wx72d2hfnlz4l560y1fsf9lpzifxpqcmx")
+            "1grmn3bd4m0rcmz544h94kimlj3gf1f343s8177ddrxfmg9m0plz")
            ("UnicodeData.txt"
-            "07d1kq190kgl92ispfx6zmdkvwvhjga0ishxsngzlw8j3kdkz4ap")
+            "0327jqfw2hyq8x986cfhwrp717r2jl7ydjjwvzp7biarrcfzq7if")
            ("Unihan.zip"
-            "1kfdhgg2gm52x3s07bijb5cxjy0jxwhd097k5lqhvzpznprm6ibf"))))
+            "0pjbyf77lbaxdhwidvpgp81cw13lfhlaw1ynn9vsmkssahmqp97p"))))
     (package
       (name "gucharmap")
-      (version "12.0.1")
+      (version "17.0.1")
       (source
        (origin
          (method url-fetch)
@@ -11279,16 +11366,19 @@ basically a text box in which notes can be written.")
                              name "-" version ".tar.xz"))
          (sha256
           (base32
-           "0m915hm2b2d6r3vs1l80rqpssvg78pv8j6nv54yg62kzknnqmpir"))))
+           "0sfixlmk7qajcvls6kv2hfczmjafjcr54aczwcdfmp5jjll4m17r"))))
-      (build-system glib-or-gtk-build-system)
+      (build-system meson-build-system)
       (arguments
        `(#:modules ((ice-9 match)
-                    (guix build glib-or-gtk-build-system)
+                    (guix build meson-build-system)
                     (guix build utils))
+         #:glib-or-gtk? #t
          #:configure-flags
          (list
-          "CFLAGS=-g -O2 -Wno-error=incompatible-pointer-types"
+          "-Ducd_path=../unicode-data"
-          "--with-unicode-data=../unicode-data")
+          "-Dvapi=false"
+          ;; gtk-doc fails because it didn't generate a devhelp2 file
+          "-Ddocs=false")
          #:phases
          (modify-phases %standard-phases
            (add-after 'unpack 'prepare-unicode-data
@@ -11301,26 +11391,26 @@ basically a text box in which notes can be written.")
                            ',unicode-files))
                #t)))))
       (native-inputs
-       `(("desktop-file-utils" ,desktop-file-utils)
+        (cons* desktop-file-utils
-         ("glib:bin" ,glib "bin")       ; for glib-compile-resources.
+               (list glib "bin")
-         ("gobject-introspection" ,gobject-introspection)
+               gobject-introspection
-         ("intltool" ,intltool)
+               intltool
-         ("itstool" ,itstool)
+               itstool
-         ("pkg-config" ,pkg-config)
+               pkg-config
-         ,@(map (match-lambda
+               python
-                  ((file hash)
+               unzip
-                   `(,file
+               (map (match-lambda
-                     ,(origin
+                      ((file hash)
-                        (method url-fetch)
+                       (origin
-                        (uri (string-append
+                         (method url-fetch)
-                              "http://www.unicode.org/Public/12.0.0/ucd/"
+                         (uri (string-append
-                              file))
+                                "https://www.unicode.org/Public/17.0.0/ucd/"
-                        (sha256 (base32 hash))))))
+                                file))
-                unicode-files)
+                         (sha256 (base32 hash)))))
-         ("unzip" ,unzip)))
+                    unicode-files)))
       (inputs
-       `(("gtk+" ,gtk+)
+       (list gtk+
-         ("xmllint" ,libxml2)))
+             libxml2))
       (home-page "https://wiki.gnome.org/Apps/Gucharmap")
       (synopsis "Unicode character picker and font browser")
       (description

gnu/packages/gnunet.scm

@@ -165,14 +165,14 @@ tool to extract metadata from a file and print the results.")
 (define-public libmicrohttpd
   (package
    (name "libmicrohttpd")
-   (version "1.0.2")
+   (version "1.0.3")
    (source (origin
             (method url-fetch)
             (uri (string-append "mirror://gnu/libmicrohttpd/libmicrohttpd-"
                                 version ".tar.gz"))
             (sha256
              (base32
-              "1ix843yqhcl8d5gh5652pw2scx4p5n836ca80ymms5rl136lycnz"))))
+              "0shj6kk4xp3k45vv696bzgx4s2jzpvhp11syck1zb70rmrxba5kq"))))
    (build-system gnu-build-system)
    (arguments
     (list #:configure-flags

gnu/packages/gnupg.scm

@@ -43,34 +43,33 @@
 ;;; along with GNU Guix.  If not, see <http://www.gnu.org/licenses/>.
 
 (define-module (gnu packages gnupg)
-  #:use-module ((guix licenses) #:prefix license:)
-  #:use-module (gnu packages)
-  #:use-module (gnu packages adns)
   #:use-module (gnu packages autotools)
-  #:use-module (gnu packages bash)
   #:use-module (gnu packages base)
+  #:use-module (gnu packages bash)
   #:use-module (gnu packages check)
-  #:use-module (gnu packages curl)
+  #:use-module (gnu packages compression)
   #:use-module (gnu packages crypto)
+  #:use-module (gnu packages curl)
+  #:use-module (gnu packages dns)
   #:use-module (gnu packages emacs)
   #:use-module (gnu packages enlightenment)
   #:use-module (gnu packages gettext)
+  #:use-module (gnu packages glib)
+  #:use-module (gnu packages gnome)
+  #:use-module (gnu packages gtk)
   #:use-module (gnu packages guile)
+  #:use-module (gnu packages ncurses)
   #:use-module (gnu packages openldap)
   #:use-module (gnu packages perl)
   #:use-module (gnu packages perl-check)
+  #:use-module (gnu packages pkg-config)
+  #:use-module (gnu packages popt)
   #:use-module (gnu packages pth)
   #:use-module (gnu packages python)
   #:use-module (gnu packages python-build)
   #:use-module (gnu packages python-xyz)
   #:use-module (gnu packages qt)
   #:use-module (gnu packages readline)
-  #:use-module (gnu packages compression)
-  #:use-module (gnu packages gtk)
-  #:use-module (gnu packages glib)
-  #:use-module (gnu packages gnome)
-  #:use-module (gnu packages pkg-config)
-  #:use-module (gnu packages ncurses)
   #:use-module (gnu packages security-token)
   #:use-module (gnu packages sqlite)
   #:use-module (gnu packages swig)
@@ -78,22 +77,24 @@
   #:use-module (gnu packages tls)
   #:use-module (gnu packages tor)
   #:use-module (gnu packages web)
-  #:use-module (gnu packages xorg)
-  #:use-module (gnu packages xml)
-  #:use-module (gnu packages popt)
   #:use-module (gnu packages xdisorg)
-  #:use-module (guix gexp)
+  #:use-module (gnu packages xml)
-  #:use-module (guix packages)
+  #:use-module (gnu packages xorg)
-  #:use-module (guix download)
+  #:use-module (gnu packages)
-  #:use-module (guix utils)
-  #:use-module (guix git-download)
   #:use-module (guix build-system copy)
   #:use-module (guix build-system gnu)
-  #:use-module (guix build-system perl)
-  #:use-module (guix build-system python)
-  #:use-module (guix build-system pyproject)
-  #:use-module (ice-9 match)
   #:use-module (guix build-system meson)
+  #:use-module (guix build-system perl)
+  #:use-module (guix build-system pyproject)
+  #:use-module (guix build-system python)
+  #:use-module (guix build-system qt)
+  #:use-module (guix download)
+  #:use-module (guix gexp)
+  #:use-module (guix git-download)
+  #:use-module ((guix licenses) #:prefix license:)
+  #:use-module (guix packages)
+  #:use-module (guix utils)
+  #:use-module (ice-9 match)
   #:use-module (srfi srfi-1))
 
 (define-public libgpg-error
@@ -934,7 +935,22 @@ software.")))
     (inherit pinentry-tty)
     (name "pinentry-qt")
     (arguments
-     `(#:configure-flags '("--enable-fallback-curses")))
+     (list #:configure-flags
+           #~(list "--enable-fallback-curses")
+           #:imported-modules
+           (append %default-gnu-imported-modules
+                   %qt-build-system-modules)
+           #:modules
+           '((guix build utils)
+             (guix build gnu-build-system)
+             ((guix build qt-build-system) #:prefix qt:))
+           #:phases
+           #~(modify-phases %standard-phases
+               (add-after 'install 'qt-wrap
+                 (lambda args
+                   (apply (assoc-ref qt:%standard-phases 'qt-wrap)
+                          #:qtbase #$(this-package-input "qtbase")
+                          args))))))
     (inputs
      (modify-inputs inputs
        (prepend qtbase qtwayland)))

gnu/packages/gnustep.scm

@@ -48,6 +48,34 @@
   #:use-module (gnu packages xml)
   #:use-module (ice-9 match))
 
+(define-public fsviewer
+  (package
+    (name "fsviewer")
+    (version "0.2.7")
+    (source
+     (origin
+       (method git-fetch)
+       (uri (git-reference
+              (url "https://github.com/roblillack/fsviewer")
+              (commit (string-append "v" version))))
+       (sha256
+        (base32
+         "067fvbq7b4lbnn1flmwf8lm0vq4n6qz5yz6hhab30l4gksfk51cg"))
+       (file-name (git-file-name name version))))
+    (build-system cmake-build-system)
+    (arguments (list #:tests? #f))      ;no tests
+    (inputs
+     (list windowmaker libxmu libxpm))
+    (native-inputs
+     (list pkg-config))
+    (home-page "https://github.com/roblillack/fsviewer")
+    (synopsis "File viewer for Window Maker")
+    (description "FSViewer is a NeXT FileViewer lookalike for Window
+Maker supporting browser mode and list mode.  This version is a fork of
+FSViewer.app originally written by George Clernon (1998-99) and later
+maintained by Guido Scholz (2002-07).")
+    (license license:gpl2)))
+
 (define-public gnustep-make
   (package
     (name "gnustep-make")
@@ -117,7 +145,7 @@ GCC runtime.
 (define-public windowmaker
   (package
     (name "windowmaker")
-    (version "0.95.9")
+    (version "0.96.0")
     (synopsis "NeXTSTEP-like window manager")
     (source (origin
               (method url-fetch)
@@ -126,60 +154,58 @@ GCC runtime.
                     "wmaker-" version "/WindowMaker-" version ".tar.gz"))
               (sha256
                (base32
-                "055pqvlkhipyjn7m6bb3fs4zz9rd1ynzl0mmwbhp05ihc3zmh8zj"))))
+                "0vbgjbqnv2gcpimnrh2fc383gxcdfhgz1j3f2lfa4jng4fx31qag"))))
     (build-system gnu-build-system)
     (arguments
-     `(#:modules ((guix build gnu-build-system)
+     (list
+      #:modules '((guix build gnu-build-system)
                   (guix build utils)
                   (ice-9 match))
-       #:phases
+      #:phases
-       (modify-phases %standard-phases
+      #~(modify-phases %standard-phases
-         (add-before 'configure 'pre-configure
+          (add-before 'configure 'pre-configure
-           (lambda* (#:key outputs #:allow-other-keys)
+            (lambda _
-             ;; 'wmaker' wants to invoke 'wmaker.inst' the first time,
+              ;; 'wmaker' wants to invoke 'wmaker.inst' the first time,
-             ;; and the 'wmsetbg', so make sure it uses the right ones.
+              ;; and the 'wmsetbg', so make sure it uses the right ones.
-             ;; We can't use a wrapper here because that would pollute
+              ;; We can't use a wrapper here because that would pollute
-             ;; $PATH in the whole session.
+              ;; $PATH in the whole session.
-             (let* ((out (assoc-ref outputs "out"))
+              (let* ((bin (string-append #$output "/bin")))
-                    (bin (string-append out "/bin")))
+                (substitute* "src/main.c"
-               (substitute* "src/main.c"
+                  (("\"wmaker\\.inst")
-                 (("\"wmaker\\.inst")
+                   (string-append "\"" bin "/wmaker.inst")))
-                  (string-append "\"" bin "/wmaker.inst")))
+                (substitute* '("src/defaults.c" "WPrefs.app/Menu.c")
-               (substitute* '("src/defaults.c" "WPrefs.app/Menu.c")
+                  (("\"wmsetbg")
-                 (("\"wmsetbg")
+                   (string-append "\"" bin "/wmsetbg")))
-                  (string-append "\"" bin "/wmsetbg")))
+                ;; Add enough cells to the command character array to
-               ;; Add enough cells to the command character array to
+                ;; allow passing our large path to the wmsetbg binary.
-               ;; allow passing our large path to the wmsetbg binary.
+                ;; The path to wmsetbg in Guix requires 67 extra characters.
-               ;; The path to wmsetbg in Guix requires 67 extra characters.
+                (substitute* "src/defaults.c"
-               (substitute* "src/defaults.c"
+                  (("len = strlen\\(text\\) \\+ 40;")
-                 (("len = strlen\\(text\\) \\+ 40;")
+                   (string-append "len = strlen(text) + 107;"))))))
-                  (string-append "len = strlen(text) + 107;"))))))
+          (add-after 'install 'install-xsession
-         (add-after 'install 'install-xsession
+            (lambda _
-           (lambda* (#:key outputs #:allow-other-keys)
+              (let* ((xsessions (string-append #$output "/share/xsessions")))
-             (let* ((out (assoc-ref outputs "out"))
+                (mkdir-p xsessions)
-                    (xsessions (string-append out "/share/xsessions")))
+                (call-with-output-file
-               (mkdir-p xsessions)
+                    (string-append xsessions "/windowmaker.desktop")
-               (call-with-output-file
+                  (lambda (port)
-                   (string-append xsessions "/windowmaker.desktop")
+                    (format port "~
-                 (lambda (port)
-                   (format port "~
                     [Desktop Entry]~@
                     Name=Window Maker~@
                     Comment=~a~@
                     Exec=~a/bin/wmaker~@
                     Type=Application~%"
-                           (string-map (match-lambda
+                            (string-map (match-lambda
-                                         (#\newline #\space)
+                                          (#\newline #\space)
-                                         (chr chr))
+                                          (chr chr))
-                                       ,synopsis) out))))))
+                                        #$synopsis) #$output))))))
-         (add-after 'install-xsession 'wrap
+          (add-after 'install-xsession 'wrap
-           (lambda* (#:key outputs #:allow-other-keys)
+            (lambda _
-             (let* ((out (assoc-ref outputs "out"))
+              (let* ((bin (string-append #$output "/bin")))
-                    (bin (string-append out "/bin")))
+                ;; In turn, 'wmaker.inst' wants to invoke 'wmmenugen'
-               ;; In turn, 'wmaker.inst' wants to invoke 'wmmenugen'
+                ;; etc., so make sure everything is in $PATH.
-               ;; etc., so make sure everything is in $PATH.
+                (wrap-program (string-append bin "/wmaker.inst")
-               (wrap-program (string-append bin "/wmaker.inst")
+                  `("PATH" ":" prefix (,bin)))))))))
-                 `("PATH" ":" prefix (,bin)))))))))
     (inputs
      (list bash-minimal                 ;for wrap-program
            fontconfig

gnu/packages/gnuzilla.scm

@@ -604,9 +604,10 @@ in the case of Firefox, it is browser/locales/all-locales."
     "zh-CN"
     "zh-TW"))
 
-(define %icecat-base-version "140.9.0")
+;;; Please keep these versions in sync with icedove.
+(define %icecat-base-version "140.9.1")
 (define %icecat-version (string-append %icecat-base-version "-gnu1"))
-(define %icecat-build-id "20260324000000") ;must be of the form YYYYMMDDhhmmss
+(define %icecat-build-id "20260414000000") ;must be of the form YYYYMMDDhhmmss
 
 ;; 'icecat-source' is a "computed" origin that generates an IceCat tarball
 ;; from the corresponding upstream Firefox ESR tarball, using the 'makeicecat'
@@ -626,9 +627,9 @@ in the case of Firefox, it is browser/locales/all-locales."
                   "firefox-" upstream-firefox-version ".source.tar.xz"))
             (sha256
              (base32
-              "0b79x61w51fjf12p5sr9pipg4b3fjdnbsg0j20fdai3jq6jb4wmr"))))
+              "1hld2kbzvrmr7pqq0r5hw639xl8kw29lm2hsbn0m4kxang1fdlj5"))))
 
-         (gnuzilla-commit "10a8be3fcf725ed01ffb7279ec27c2fba55dd2d2")
+         (gnuzilla-commit "f3595923458a5255f61a3853bd83bb5f004dc3bc")
          (gnuzilla-source
           (origin
             (method git-fetch)
@@ -639,7 +640,7 @@ in the case of Firefox, it is browser/locales/all-locales."
                                       (string-take gnuzilla-commit 8)))
             (sha256
              (base32
-              "076s3zpq0cj24a2pjarb57k1xv9z45xazps8rgypzw8yc4pxi9rj"))))
+              "03kc08cvmdv3sxihf5hfhw2k91mg1y6f46b3x47p7q98phgk03cv"))))
 
          ;; 'search-patch' returns either a valid file name or #f, so wrap it
          ;; in 'assume-valid-file-name' to avoid 'local-file' warnings.
@@ -1248,24 +1249,29 @@ testing.")
        (cpe-name . "firefox_esr")
        (cpe-version . ,(first (string-split version #\-)))))))
 
-(define %icedove-build-id "20260224000000") ;must be of the form YYYYMMDDhhmmss
+(define %icedove-build-id "20260403000000") ;must be of the form YYYYMMDDhhmmss
 ;;; See <https://product-details.mozilla.org/1.0/thunderbird_versions.json>
 ;;; for the source of truth regarding Thunderbird releases.
-(define %icedove-version "140.8.0")
+;;; Please keep these version numbers in sync with icecat.
+;;; Please also update thunderbird-comm-source and thunderbird-comm-l10n to
+;;; the icedove version.
+(define %icedove-version "140.9.1")
 
 ;; Provides the "comm" folder which is inserted into the icecat source.
 ;; Avoids the duplication of Icecat's source tarball.  Pick the changeset that
 ;; matches the most recent tag of the form 'THUNDERBIRD_140_2_0esr_RELEASE'.
+;; Please also update the commit of thunderbird-comm-l10n to match the
+;; changeset used by thunderbird-comm-source.
 (define thunderbird-comm-source
   (origin
     (method hg-fetch)
     (uri (hg-reference
           (url "https://hg.mozilla.org/releases/comm-esr140")
-          (changeset "aa377fbf351e6b10b053e6afa421755c82d5fcf7")))
+          (changeset "427d792f23672fc4adbe9436ce7dddbb2bfb287a")))
     (file-name (string-append "thunderbird-" %icedove-version "-checkout"))
     (sha256
      (base32
-      "0595jg1qbwclzi9qssljqkisrm2dn99rzxzaz2mcfi7b1kvbfaki"))
+      "09fj375a0zb5kgvw94f13997zhcj67a4g5ylpdbjzfql0chh572p"))
     (patches (search-patches "icedove-observer-fix.patch"))))
 
 ;;; To regenerate, see the `format-locales' helper defined above.
@@ -1342,7 +1348,8 @@ testing.")
   ;; The commit to use can be found in the mail/locales/l10n-changesets.json
   ;; file in Thunderbird's source (e.g.:
   ;; <https://hg-edge.mozilla.org/releases/comm-esr140/file/efb07defaa2d56105675dc1d936af581ebfd8ffa/mail/locales/l10n-changesets.json>)
-  (let* ((commit "b6fd3d6c75ba35d91fe131a654df76ca86f35ac5")
+  ;; where the hash in the URL is the changeset from thunderbird-comm-source.
+  (let* ((commit "7c86eab97e77f00ca7ed8f224d38338a3ed46693")
          (revision "0")
          (version (git-version %icedove-version revision commit)))
     (origin
@@ -1353,7 +1360,7 @@ testing.")
       (file-name (git-file-name "thunderbird-l10n" version))
       (sha256
        (base32
-        "0n4df6kv70a6mxxsqwc83nhj8vl7acv9bcbf07nkcsjjxh3szvqc")))))
+        "1navma2gwcgbbiwcwrc5lrx2jk3qmrnrc6i8pvhb8156pz4cg5nd")))))
 
 (define icedove-source
   (let ((name (string-append "icedove-" %icedove-version)))

gnu/packages/golang-build.scm

@@ -181,7 +181,7 @@ collections like from @code{container/tree}.
      "This package provides a library for calling C functions from Go without
 Cgo.
 
-Featues:
+Features:
 @itemize
 @item build for other platforms easily without a C compiler
 @item efficiently cache entirely Go builds
@@ -1042,7 +1042,7 @@ compile does not support generics.")
      (list
       #:skip-build? #t
       #:import-path "golang.org/x/mod"
-      ;; Test tries to acces:
+      ;; Test tries to access:
       ;; "http://ct.googleapis.com/logs/argon2020/ct/v1/get-sth": dial tcp:
       ;; lookup ct.googleapis.com
       #:test-flags #~(list "-skip" "TestCertificateTransparency")))
@@ -1712,7 +1712,7 @@ values.")
     (license license:bsd-3)))
 
 (define-public go-google-golang-org-genproto-googleapis-rpc
-  ;; No release or verion tags, use the latest commit.
+  ;; No release or version tags, use the latest commit.
   (let ((commit "49b9836ed3ff1e1dd329d17e442987447e931c7d")
         (revision "1"))
     (package

gnu/packages/golang-check.scm

@@ -127,7 +127,7 @@ value and call @code{t.Fatal()} if the assertion fails.")
     (description
      "Correct is a collection of assertion libraries for Golang, intended to be
 used together.  It tries not to strictly enforce that, though - most of
-correct should be customizeable either by changing some options or by using
+correct should be customizable either by changing some options or by using
 only some sub-packages of correct.")
     (license license:mpl2.0)))
 
@@ -1195,7 +1195,7 @@ when comparing complex types like structures and maps.")
     (home-page "https://github.com/go-testfixtures/testfixtures")
     (synopsis "Ruby on Rails like test fixtures for Go")
     (description
-     "Ths package mimics the
+     "This package mimics the
 @url{http://guides.rubyonrails.org/testing.html#the-test-database, Ruby on
 Rails' way} of writing tests for database applications, where sample data is
 kept in fixtures files.  Before the execution of every test, the test database
@@ -1462,7 +1462,7 @@ Node @code{nock} library, it has features like:
 @item Supports map and filters to handle mocks easily
 @item Wide compatible HTTP interceptor using @code{http.RoundTripper} interface
 @item Works with any @code{net/http} compatible client, such as @code{gentleman}
-@item Network timeout/cancelation delay simulation
+@item Network timeout/cancellation delay simulation
 @item Extensible and hackable API
 @end itemize")
     (license license:expat)))
@@ -1871,7 +1871,7 @@ differently.")
               (with-directory-excursion (string-append "src/" import-path)
                 (delete-file-recursively "example"))))
           (add-after 'unpack 'preserve-PATH-from-environment
-            ;; Unlike FHS systems, Guix needs to look its commands fom PATH.
+            ;; Unlike FHS systems, Guix needs to look for its commands in PATH.
             ;; Expose it by default in the test environments.
             (lambda* (#:key tests? import-path #:allow-other-keys)
               (with-directory-excursion (string-append "src/" import-path)
@@ -2254,6 +2254,45 @@ can be used in test code as a mock of the interface.")
 Perl's @url{https://metacpan.org/pod/Test::Deep, Test::Deep perl}.")
     (license license:bsd-2)))
 
+(define-public go-github-com-maxbrunsfeld-counterfeiter-v6
+  (package
+    (name "go-github-com-maxbrunsfeld-counterfeiter")
+    (version "6.12.2")
+    (source
+     (origin
+       (method git-fetch)
+       (uri (git-reference
+              (url "https://github.com/maxbrunsfeld/counterfeiter")
+              (commit (string-append "v" version))))
+       (file-name (git-file-name name version))
+       (sha256
+        (base32 "0c4a8gcm3l992vydldcfsvb2jk4spnmxsk2i4klqh4fpagbpa069"))))
+    (build-system go-build-system)
+    (arguments
+     (list
+      #:import-path "github.com/maxbrunsfeld/counterfeiter/v6"
+      #:test-flags
+      #~(list "-skip" "TestIntegration")
+      #:test-subdirs
+      #~(list "." "arguments" "command" "generator" "integration")
+      #:phases
+      #~(modify-phases %standard-phases
+          (add-before 'build 'go-generate
+            (lambda* (#:key import-path #:allow-other-keys)
+              (with-directory-excursion (string-append "src/" import-path)
+                (invoke "go" "generate" "-v" "-n" "./...")))))))
+    (native-inputs
+     (list go-github-com-onsi-gomega
+           go-github-com-sclevine-spec
+           go-golang-org-x-text
+           go-golang-org-x-tools))
+    (home-page "https://github.com/maxbrunsfeld/counterfeiter")
+    (synopsis "Generate self-contained, type-safe test doubles in Go")
+    (description
+     "This package provides fake implementations of the object's
+collaborators.")
+    (license license:expat)))
+
 (define-public go-github-com-mfridman-tparse
   (package
     (name "go-github-com-mfridman-tparse")
@@ -2333,7 +2372,7 @@ output.")
     (home-page "https://github.com/modocache/gover")
     (synopsis "Integration with coveralls.io for *.coverprofile files")
     (description
-     "This package inplements a functionality to collect all
+     "This package implements a functionality to collect all
 @code{.coverprofile} files rooted in the project and concatenante them into a
 single file ready for https://coveralls.io/.")
     (license license:asl2.0)))
@@ -2703,6 +2742,31 @@ GIT_TRACE mechanism.")
      "This package provides tools for detecting deadlocks at run-time in Go.")
     (license license:asl2.0)))
 
+(define-public go-github-com-sclevine-spec
+  (package
+    (name "go-github-com-sclevine-spec")
+    (version "1.4.0")
+    (source
+     (origin
+       (method git-fetch)
+       (uri (git-reference
+             (url "https://github.com/sclevine/spec")
+             (commit (string-append "v" version))))
+       (file-name (git-file-name name version))
+       (sha256
+        (base32 "0y3rqb7dd51qnw5ns7w5sy93879ybnlg6gwslbv5mkfnrk0gl7na"))))
+    (build-system go-build-system)
+    (arguments
+     (list
+      #:import-path "github.com/sclevine/spec"))
+    (home-page "https://github.com/sclevine/spec")
+    (synopsis "BDD-style test organizer for Go")
+    (description
+     "Spec is a simple BDD test organizer for Go.  It minimally extends the
+standard library @code{testing} package by facilitating easy organization of
+Go 1.7+ @url{https://blog.golang.org/subtests, subtests}.")
+    (license license:asl2.0)))
+
 (define-public go-github-com-shabbyrobe-gocovmerge
   (package
     (name "go-github-com-shabbyrobe-gocovmerge")
@@ -3342,6 +3406,33 @@ and restore them afterwards.")
 @url{http://www.freebsd.org/cgi/man.cgi?query=fail,failpoints} for Golang.")
     (license license:asl2.0)))
 
+(define-public go-go-shabbyrobe-org-gocovmerge
+  (package
+    (name "go-go-shabbyrobe-org-gocovmerge")
+    (version "0.0.0-20230507111327-fa4f82cfbf4d")
+    (source
+     (origin
+       (method git-fetch)
+       (uri (git-reference
+              (url "https://git.sr.ht/~shabbyrobe/gocovmerge")
+              (commit (go-version->git-ref version))))
+       (file-name (git-file-name name version))
+       (sha256
+        (base32 "0sbr6i1m5hjbnlfad8cl8w30949r02c66l85hcmyyd9ka30mqr23"))))
+    (build-system go-build-system)
+    (arguments
+     (list
+      #:import-path "go.shabbyrobe.org/gocovmerge"))
+    (propagated-inputs
+     (list go-golang-org-x-tools))
+    (home-page "https://go.shabbyrobe.org/gocovmerge")
+    (synopsis "gocovmerge")
+    (description
+     "Package gocovmerge takes the results from multiple @code{go test
+-coverprofile} runs and merges them into one profile.  It is a maintained fork
+of @url{https://github.com/wadey/gocovmerge}.")
+    (license license:bsd-2)))
+
 (define-public go-go-simpler-org-sloglint
   (package
     (name "go-go-simpler-org-sloglint")
@@ -3552,6 +3643,13 @@ the source code, it only prints out style mistakes.")
     (propagated-inputs
      (list go-go-yaml-in-yaml-v4))))
 
+(define-public go-gopkg-in-h2non-gock-v1
+  (package/inherit go-github-com-h2non-gock
+    (name "go-gopkg-in-h2non-gock-v1")
+    (arguments
+     (substitute-keyword-arguments arguments
+       ((#:import-path _) "gopkg.in/h2non/gock.v1")))))
+
 (define-public go-gopkg-in-go-playground-assert-v1
   (package
     (inherit go-github-com-go-playground-assert-v2)

gnu/packages/golang-crypto.scm

@@ -1229,6 +1229,36 @@ MetroHash}, a high quality, high performance hash algorithm.")
      "This package provides a hashing function.")
     (license license:expat)))
 
+(define-public go-github-com-digitorus-pkcs7
+  (package
+    (name "go-github-com-digitorus-pkcs7")
+    (version "0.0.0-20250730155240-ffadbf3f398c")
+    (source
+     (origin
+       (method git-fetch)
+       (uri (git-reference
+              (url "https://github.com/digitorus/pkcs7")
+              (commit (go-version->git-ref version))))
+       (file-name (git-file-name name version))
+       (sha256
+        (base32 "0snamp6fbg5vir0lsw5wzvyagrdd832lw6k7cnvcahcgp8l084zc"))))
+    (build-system go-build-system)
+    (arguments
+     (list
+      #:import-path "github.com/digitorus/pkcs7"))
+    (native-inputs
+     (list openssl))
+    (home-page "https://github.com/digitorus/pkcs7")
+    (synopsis "PKCS#7 implementation for Go")
+    (description
+     "This package implements parsing and generation of some
+PKCS#7/Cryptographic Message
+Syntax (@url{https://www.rfc-editor.org/rfc/rfc2315},
+@url{https://www.rfc-editor.org/rfc/rfc5652, RFC 2315}, RFC 5652) structures
+for Go applications.  It's an alternative fork of deprecated
+@url{https://github.com/mozilla-services/pkcs7}.")
+    (license license:expat)))
+
 (define-public go-github-com-dvsekhvalnov-jose2go
   (package
     (name "go-github-com-dvsekhvalnov-jose2go")
@@ -1414,6 +1444,43 @@ providing bidirectional mapping values to their names, plus enum convenience
 for values.")
     (license license:bsd-3)))
 
+(define-public go-github-com-getsops-gopgagent
+  (package
+    (name "go-github-com-getsops-gopgagent")
+    (version "0.0.0-20241224165529-7044f28e491e")
+    (source
+     (origin
+       (method git-fetch)
+       (uri (git-reference
+              (url "https://github.com/getsops/gopgagent")
+              (commit (go-version->git-ref version))))
+       (file-name (git-file-name name version))
+       (sha256
+        (base32 "1n1r7jkb48y06jw2dhkaqs33j6qgwf9fvbisd1zsr6v2k7wgfvf3"))
+       (modules '((guix build utils)))
+       (snippet
+        #~(begin
+            (for-each
+             (lambda (f)
+               ;; XXX: Without this snippet the build fails with
+               ;; code in directory github.com/getsops/gopgagent
+               ;; expects import "go.mozilla.org/gopgagent"
+               (substitute* f
+                 (("import \"go\\.mozilla\\.org/gopgagent\"") "")))
+             '("gpgagent.go" "gpgagent_test.go"))
+            #t))))
+    (build-system go-build-system)
+    (arguments
+     (list
+      #:import-path "github.com/getsops/gopgagent"
+      #:test-flags #~(list "-vet=off")))
+    (home-page "https://github.com/getsops/gopgagent")
+    (synopsis "GPG Agent helpers for Go")
+    (description
+     "This package provides an API to interact with the local GPG Agent from
+Golang.")
+    (license license:asl2.0)))
+
 (define-public go-github-com-gliderlabs-ssh
   (package
     (name "go-github-com-gliderlabs-ssh")
@@ -1681,6 +1748,35 @@ See http://keccak.noekeon.org.")
 MurmurHash} revision (aka MurmurHash3).")
     (license license:bsd-3)))
 
+(define-public go-github-com-hiddeco-sshsig
+  (package
+    (name "go-github-com-hiddeco-sshsig")
+    (version "0.2.0")
+    (source
+     (origin
+       (method git-fetch)
+       (uri (git-reference
+              (url "https://github.com/hiddeco/sshsig")
+              (commit (string-append "v" version))))
+       (file-name (git-file-name name version))
+       (sha256
+        (base32 "1raq5j1hr693lcj7nrj3wnsyfp30w96apjxyjmlvxb7ihnkhikv1"))))
+    (build-system go-build-system)
+    (arguments
+     (list
+      #:import-path "github.com/hiddeco/sshsig"))
+    (native-inputs
+     (list go-github-com-stretchr-testify))
+    (propagated-inputs
+     (list go-golang-org-x-crypto))
+    (home-page "https://github.com/hiddeco/sshsig")
+    (synopsis "Messages signing and verification using SSH in Golang")
+    (description
+     "Package sshsig provides an API to sign and verify messages using SSH
+keys.  It is an implementation of the SSH Signature format as described in
+@url{https://github.com/openssh/openssh-portable/blob/V_9_3_P1/PROTOCOL.sshsig}.")
+    (license license:asl2.0)))
+
 (define-public go-github-com-jcmturner-aescts-v2
   (package
     (name "go-github-com-jcmturner-aescts-v2")
@@ -1921,7 +2017,7 @@ hash.")
     (description
      "Package ssh wraps the @code{crypto/ssh} package with a higher-level API
 for building SSH servers.  The goal of the API was to make it as simple as
-using net/http, so the API is very similar.  It's alternaive fork of
+using net/http, so the API is very similar.  It's alternative fork of
 @url{https://github.com/gliderlabs/ssh}.")
     (license license:bsd-3)))
 
@@ -3720,6 +3816,123 @@ is an extremely fast non-cryptographic hash algorithm.")
 @url{https://en.wikipedia.org/wiki/RC2, RC2} Cipher in Golang.")
     (license license:asl2.0)))
 
+(define-public go-github-com-zmap-zcertificate
+  (package
+    (name "go-github-com-zmap-zcertificate")
+    (version "0.0.1")
+    (source
+     (origin
+       (method git-fetch)
+       (uri (git-reference
+              (url "https://github.com/zmap/zcertificate")
+              (commit (string-append "v" version))))
+       (file-name (git-file-name name version))
+       (sha256
+        (base32 "1lxayyxb0gvls1l05jglqdf8b7zxz3gw94kwbgxvshs7lc0s6hnw"))))
+    (build-system go-build-system)
+    (arguments
+     (list
+      ;; XXX: Source only, to break cycle with
+      ;; go-github-com-zmap-zcrypto. Addintional inputs requaired only to
+      ;; build CLI:
+      ;; 
+      ;; -  github.com/sirupsen/logrus
+      ;; -  github.com/zmap/zcrypto
+      ;; -  github.com/zmap/zlint/v3
+      #:skip-build? #t
+      #:tests? #f
+      #:import-path "github.com/zmap/zcertificate"))
+    (home-page "https://github.com/zmap/zcertificate")
+    (synopsis "ZCertificate")
+    (description "ZCertificate parses X.509 certificates and runs
+@@url{https://github.com/zmap/zlint,ZLint}.")
+    (license license:asl2.0)))
+
+(define-public go-github-com-zmap-zcrypto
+  (package
+    (name "go-github-com-zmap-zcrypto")
+    (version "0.0.0-20260309174858-0e3c42de5a13")
+    (source
+     (origin
+       (method git-fetch)
+       (uri (git-reference
+              (url "https://github.com/zmap/zcrypto")
+              (commit (go-version->git-ref version))))
+       (file-name (git-file-name name version))
+       (sha256
+        (base32 "0vbgpr2jms9la1nrzxwcfn6ngi3c2pzglh3a3yfkm0ahxvh4wpca"))))
+    (build-system go-build-system)
+    (arguments
+     (list
+      #:import-path "github.com/zmap/zcrypto"
+      #:test-flags
+      ;; Network access is required.
+      #~(list "-skip" (string-join
+                       (list "TestFetchRemote"
+                             "TestVerifyHostname"
+                             "TestTLSVersions"
+                             "TestCipherSuitesBadSSL")
+                       "|"))))
+    (native-inputs
+     (list go-github-com-stretchr-testify
+           go-gopkg-in-check-v1))
+    (propagated-inputs
+     (list go-github-com-mreiferson-go-httpclient
+           go-github-com-op-go-logging
+           go-github-com-sirupsen-logrus
+           go-github-com-weppos-publicsuffix-go
+           go-github-com-zmap-zcertificate
+           go-golang-org-x-crypto
+           go-golang-org-x-net))
+    (home-page "https://github.com/zmap/zcrypto")
+    (synopsis "Liberal Go TLS + X.509 Library for Research")
+    (description
+     "ZCrypto is a research and data collection cryptography library, designed
+to be used for measuring and analyzing cryptographic deployments on the
+Internet.  It is largely centered around the @code{WebPKI}.")
+    ;; See LICENSE file for more details.
+    (license (list license:asl2.0 license:expat license:isc))))
+
+(define-public go-github-com-zmap-zlint-v3
+  (package
+    (name "go-github-com-zmap-zlint-v3")
+    (version "3.6.8")
+    (source
+     (origin
+       (method git-fetch)
+       (uri (git-reference
+              (url "https://github.com/zmap/zlint")
+              (commit (string-append "v" version))))
+       (file-name (git-file-name name version))
+       (sha256
+        (base32 "054ddx6xdzhdjd214kp3kby0q5w4z1d4n61fav5vz73afm4z4bij"))))
+    (build-system go-build-system)
+    (arguments
+     (list
+      #:import-path "github.com/zmap/zlint/v3"
+      #:unpack-path "github.com/zmap/zlint"
+      #:build-flags
+      #~(list (string-append "-ldflags=-X main.version=" #$version))
+      #:test-flags
+      ;; gen_test.go:236: exec: "git": executable file not found in $PATH
+      #~(list "-skip" "TestGetTestData|TestSaveCert")))
+    (propagated-inputs
+     (list go-github-com-pelletier-go-toml
+           go-github-com-sirupsen-logrus
+           go-github-com-zmap-zcrypto
+           go-golang-org-x-crypto
+           go-golang-org-x-net
+           go-golang-org-x-text))
+    (home-page "https://github.com/zmap/zlint")
+    (synopsis "X.509 Certificate Linter")
+    (description
+     "ZLint is a X.509 certificate linter that checks for consistency with
+standards (e.g. @url{https://www.ietf.org/rfc/rfc5280.txt, RFC 5280}) and
+other relevant PKI requirements (e.g.
+@url{https://cabforum.org/wp-content/uploads/CA-Browser-Forum-BR-1.4.8.pdf,
+CA/Browser Forum Baseline Requirements}).")
+    (license license:asl2.0)))
+
 (define-public go-gitlab-com-nyarla-go-crypt
   (package
     (name "go-gitlab-com-nyarla-go-crypt")
@@ -4199,6 +4412,19 @@ traffic.")))
 +utility to convert SSH RSA keys to GPG keys.")
     (license license:expat)))
 
+(define-public zlint
+  (package/inherit go-github-com-zmap-zlint-v3
+    (name "zlint")
+    (arguments
+     (substitute-keyword-arguments arguments
+       ((#:tests? _ #t) #f)
+       ((#:skip-build? _ #t) #f)
+       ((#:install-source? _ #t) #f)
+       ((#:import-path _) "github.com/zmap/zlint/v3/cmd/zlint")))
+    (native-inputs (package-propagated-inputs go-github-com-zmap-zlint-v3))
+    (propagated-inputs '())
+    (inputs '())))
+
 ;;;
 ;;; Avoid adding new packages to the end of this file. To reduce the chances
 ;;; of a merge conflict, place them above by existing packages with similar

gnu/packages/golang-vcs.scm

@@ -295,6 +295,115 @@ using the Git pkt-line format used in various Git operations.")
          (replace "go-github-com-go-git-gcfg"
            go-github-com-go-git-gcfg-v2))))))
 
+(define-public go-github-com-cli-go-gh-v2
+  (package
+    (name "go-github-com-cli-go-gh-v2")
+    (version "2.13.0")
+    (source
+     (origin
+       (method git-fetch)
+       (uri (git-reference
+              (url "https://github.com/cli/go-gh")
+              (commit (string-append "v" version))))
+       (file-name (git-file-name name version))
+       (sha256
+        (base32 "1a918ll60h65abs14mpnclk1w3468mi7khasixif04ihxd0rcsns"))))
+    (build-system go-build-system)
+    (arguments
+     (list
+      #:skip-build? #t
+      #:import-path "github.com/cli/go-gh/v2"
+      #:embed-files #~(list ".*\\.xml")
+      ;; Network access or git configuration are required.
+      #:test-flags #~(list "-skip" "TestRemotes|TestNewHTTPClient")))
+    (native-inputs
+     (list go-github-com-alecthomas-chroma-v2
+           go-github-com-leaanthony-go-ansi-parser
+           go-github-com-stretchr-testify
+           go-gopkg-in-h2non-gock-v1))
+    (propagated-inputs
+     (list go-github-com-alecaivazis-survey-v2
+           go-github-com-charmbracelet-glamour
+           go-github-com-charmbracelet-lipgloss
+           go-github-com-cli-browser
+           go-github-com-cli-safeexec
+           go-github-com-cli-shurcool-graphql
+           go-github-com-google-shlex
+           go-github-com-henvic-httpretty
+           go-github-com-itchyny-gojq
+           go-github-com-makenowjust-heredoc
+           go-github-com-masterminds-sprig-v3
+           go-github-com-mgutz-ansi
+           go-github-com-muesli-reflow
+           go-github-com-muesli-termenv
+           go-github-com-thlib-go-timezone-local
+           go-golang-org-x-term
+           go-golang-org-x-text
+           go-gopkg-in-yaml-v3))
+    (home-page "https://github.com/cli/go-gh")
+    (synopsis "Go library for the GitHub CLI")
+    (description
+     "Package gh is a library for CLI Go applications to help interface with
+the gh CLI tool, and the @code{GitHub} API.")
+    (license license:expat)))
+
+(define-public go-github-com-cli-go-internal
+  (package
+    (name "go-github-com-cli-go-internal")
+    (version "0.0.0-20241025142207-6c48bcd5ce24")
+    (source
+     (origin
+       (method git-fetch)
+       (uri (git-reference
+              (url "https://github.com/cli/go-internal")
+              (commit (go-version->git-ref version))))
+       (file-name (git-file-name name version))
+       (sha256
+        (base32 "1s2rnmsdj22hg8hz9xv2fj1vs1k9xfz8rvz9bm1cg3ddq33hl4a5"))))
+    (build-system go-build-system)
+    (arguments
+     (list
+      #:skip-build? #t
+      #:import-path "github.com/cli/go-internal"
+      #:test-flags
+      ;; TestSimple/cover requires network access to proxy.golang.org.
+      #~(list "-skip" "TestSimple/cover")))
+    (propagated-inputs
+     (list go-golang-org-x-mod
+           go-golang-org-x-sys
+           go-golang-org-x-tools))
+    (home-page "https://github.com/cli/go-internal")
+    (synopsis "Internal utilities for GitHub CLI")
+    (description
+     "This package provides internal utilities for the GitHub CLI.  It is a
+hard fork of @code{testscript} to allow the @code{gh} maintainers to explore
+its use while providing flexibility for modifications and extensions.")
+    (license license:bsd-3)))
+
+(define-public go-github-com-cli-shurcool-graphql
+  (package
+    (name "go-github-com-cli-shurcool-graphql")
+    (version "0.0.4")
+    (source
+     (origin
+       (method git-fetch)
+       (uri (git-reference
+              (url "https://github.com/cli/shurcooL-graphql")
+              (commit (string-append "v" version))))
+       (file-name (git-file-name name version))
+       (sha256
+        (base32 "0w5ixfr4ia35n8adadr2rsca3f04bq36fxkgh27fw7rd0mxf199l"))))
+    (build-system go-build-system)
+    (arguments
+     (list
+      #:import-path "github.com/cli/shurcooL-graphql"))
+    (home-page "https://github.com/cli/shurcooL-graphql")
+    (synopsis "GraphQL client implementation for GitHub CLI")
+    (description
+     "This package provides a GraphQL client implementation forked from
+@code{shurcooL/graphql}, customized for use in the GitHub CLI.")
+    (license license:expat)))
+
 (define-public go-github-com-jiangxin-goconfig
   (package
     (name "go-github-com-jiangxin-goconfig")

gnu/packages/golang.scm

@@ -1022,56 +1022,6 @@ in the style of communicating sequential processes (@dfn{CSP}).")
           (map (lambda (suffix) (string-append "armv9" suffix "-a"))
                '("" ".1" ".2" ".3" ".4" ".5"))))
 
-(define-public go-1.23
-  (package
-    (inherit go-1.22)
-    (name "go")
-    (version "1.23.12")
-    (source
-     (origin
-       (method git-fetch)
-       (uri (git-reference
-             (url "https://github.com/golang/go")
-             (commit (string-append "go" version))))
-       (file-name (git-file-name name version))
-       (sha256
-        (base32 "0nxcp8wikn93zxipm829dyyagwys13yhf452ai357wzbdzqihm7x"))))
-    (arguments
-     (substitute-keyword-arguments (package-arguments go-1.22)
-       ((#:phases phases)
-        #~(modify-phases #$phases
-            (replace 'disable-more-tests
-              (lambda _
-                #$@(cond
-                     ((target-aarch64?)
-                      ;; https://go-review.googlesource.com/c/go/+/151303
-                      ;; This test is known buggy on aarch64 and is enabled and
-                      ;; disabled upstream with some regularity.
-                      #~((substitute* "src/plugin/plugin_test.go"
-                           (("package plugin_test")
-                            (string-append "// +build !linux linux,!arm64\n\n"
-                                           "package plugin_test")))))
-                     ((target-arm32?)
-                      ;; This test fails when run on aarch64-linux.
-                      #~((substitute* "src/cmd/link/internal/ld/elf_test.go"
-                           (("TestElfBindNow.*" all)
-                            (string-append
-                              all
-                              "        if runtime.GOARCH == \"arm\" {\n"
-                              "                t.Skipf(\"skipping; flaky on armhf\")\n"
-                              "        }\n")))))
-                     (else (list #t)))))))))
-    (properties
-     `((compiler-cpu-architectures
-         ("aarch64" ,@%go-1.23-arm64-micro-architectures)
-         ("armhf" ,@%go-1.17-arm-micro-architectures)
-         ("powerpc64le" ,@%go-1.17-powerpc64le-micro-architectures)
-         ("x86_64" ,@%go-1.18-x86_64-micro-architectures))))
-    (native-inputs
-     ;; setarch was added to the tsan test suite in 1.23.12
-     `(("go" ,util-linux)
-       ,@(package-native-inputs go-1.22)))))
-
 (define-public go-1.24
   (package
     (inherit go-1.22)
@@ -1239,7 +1189,6 @@ in the style of communicating sequential processes (@dfn{CSP}).")
 (define-public go-std-1.20 (make-go-std go-1.20))
 (define-public go-std-1.21 (make-go-std go-1.21))
 (define-public go-std-1.22 (make-go-std go-1.22))
-(define-public go-std-1.23 (make-go-std go-1.23))
 (define-public go-std-1.24 (make-go-std go-1.24))
 (define-public go-std-1.25 (make-go-std go-1.25))
 (define-public go-std-1.26 (make-go-std go-1.26))

gnu/packages/groovy.scm

@@ -412,7 +412,7 @@ similar to javadoc."))))
       (inherit base)
       (arguments
        `(;#:tests? #f;Requires spock-framework which is a circular dependency
-         #:ant ,ant/java8; ant is actually a dependency of this package, and we need 1.10
+         #:ant ,ant; ant is actually a dependency of this package, and we need 1.10
          ,@(substitute-keyword-arguments arguments
              ((#:phases phases)
               `(modify-phases ,phases
@@ -431,8 +431,7 @@ similar to javadoc."))))
          ("java-asm-analysis" ,java-asm-analysis-8)
          ,@(package-inputs base)))
       (native-inputs
-       `(("ant-junit" ,ant-junit)
+       `(("groovy-bootstrap" ,groovy-bootstrap)
-         ("groovy-bootstrap" ,groovy-bootstrap)
          ("groovy-xml" ,groovy-xml)
          ("groovy-test" ,groovy-test)
          ("groovy-tests-bootstrap" ,groovy-tests-bootstrap)

gnu/packages/gstreamer.scm

@@ -129,7 +129,7 @@
            libxv
            mesa
            sdl
-           v4l-utils-minimal))
+           v4l-utils))
     (synopsis "1394-Based Digital Camera Control Library")
     (description "LibDC1394 is a library that provides functionality to control
 any camera that conforms to the 1394-Based Digital Camera Specification written
@@ -721,7 +721,7 @@ for the GStreamer multimedia library.")
            speex
            taglib
            twolame
-           v4l-utils-minimal
+           v4l-utils
            wavpack
            zlib))
     (propagated-inputs
@@ -942,7 +942,7 @@ model to base your own plug-in on, here it is.")
             tinyalsa
             transcode
             usrsctp
-            v4l-utils-minimal
+            v4l-utils
             vo-aacenc
             vo-amrwbenc
             vulkan-headers

gnu/packages/gtk.scm

@@ -517,22 +517,19 @@ functions which were removed.")
                 "0pik2d3995z0rjcjhb4hsj5fsph3m8khg6j10k6mx4j2j727aq6l"))))
     (build-system waf-build-system)
     (arguments
-     `(#:phases
+     (list
-       (modify-phases %standard-phases
+      #:tests? #f ; no check target
-         (add-before 'configure 'set-flags
+      #:phases
-           (lambda* (#:key outputs #:allow-other-keys)
+      #~(modify-phases %standard-phases
-             ;; Allow 'bin/ganv_bench' to find libganv-1.so.
+          (add-before 'configure 'set-flags
-             (setenv "LDFLAGS"
+            (lambda _
-                     (string-append "-Wl,-rpath="
+              ;; Allow 'bin/ganv_bench' to find libganv-1.so.
-                                    (assoc-ref outputs "out") "/lib"))
+              (setenv "LDFLAGS"
-             #t)))
+                      (string-append "-Wl,-rpath=" #$output "/lib")))))))
-       #:tests? #f)) ; no check target
-    (inputs
-     `(("gtk" ,gtk+-2)
-       ("gtkmm" ,gtkmm-2)))
     (native-inputs
      (list `(,glib "bin") ; for glib-genmarshal, etc.
            pkg-config))
+    (inputs (list gtk+-2 gtkmm-2))
     (home-page "https://drobilla.net/software/ganv/")
     (synopsis "GTK+ widget for interactive graph-like environments")
     (description
@@ -1460,10 +1457,9 @@ exceptions, macros, and a dynamic programming environment.")
     (inherit guile-cairo)
     (name "guile2.2-cairo")
     (inputs
-     `(("guile" ,guile-2.2)
+     (modify-inputs inputs
-       ("guile-lib" ,guile2.2-lib)
+       (delete "guile" "guile-lib")
-       ,@(fold alist-delete (package-inputs guile-cairo)
+       (append guile-2.2 guile2.2-lib)))))
-               '("guile" "guile-lib"))))))
 
 (define-public guile-cairo-next
   ;; A commit with cairo-pointer->context, missing from guile-cairo@1.11.2
@@ -1579,11 +1575,10 @@ images onto Cairo surfaces.")
     (inherit guile-rsvg)
     (name "guile2.2-rsvg")
     (inputs
-     `(("guile" ,guile-2.2)
+     (modify-inputs inputs
-       ("guile-lib" ,guile2.2-lib)
+       (delete "guile" "guile-lib")
-       ,@(fold alist-delete (package-inputs guile-rsvg)
+       (append guile-2.2 guile2.2-lib)))
-               '("guile" "guile-lib"))))
+    (propagated-inputs (list guile2.2-cairo))))
-    (propagated-inputs `(("guile-cairo" ,guile2.2-cairo)))))
 
 (define-public guile-present
   (package
@@ -1649,9 +1644,7 @@ documents.")
     (name "guile2.2-present")
     (inputs (list guile-2.2))
     (propagated-inputs
-     `(("guile-lib" ,guile2.2-lib)
+     (list guile2.2-lib guile2.2-cairo guile2.2-rsvg))))
-       ("guile-cairo" ,guile2.2-cairo)
-       ("guile-rsvg" ,guile2.2-rsvg)))))
 
 ;;;
 ;;; C++ bindings.
@@ -2183,11 +2176,9 @@ and routines to assist in editing internationalized text.")
     (license license:lgpl2.1+)))
 
 (define-public girara
-  ;; TODO: Move propagated inputs to inputs after core-updates is merged (as
-  ;; of 2024-03)
   (package
     (name "girara")
-    (version "0.4.5")
+    (version "2026.02.04")
     (source
      (origin
        (method git-fetch)
@@ -2196,35 +2187,10 @@ and routines to assist in editing internationalized text.")
               (commit version)))
        (file-name (git-file-name name version))
        (sha256
-        (base32 "04igidbihgq5k7fh0jd5n26w00qlb47riky6q7qlp5k314d6cd2y"))))
+        (base32 "04adir5a8g2hqgv4vzpg52i2524abpcrqf3fcffrbwp8syan0df1"))))
-    (arguments
-     (list
-      #:phases
-      #~(modify-phases %standard-phases
-          (add-before 'check 'start-xserver
-            ;; Tests require a running X server.
-            (lambda* (#:key inputs #:allow-other-keys)
-              (let ((xorg-server (assoc-ref inputs "xorg-server"))
-                    (display ":1"))
-                (setenv "DISPLAY" display)
-
-                ;; On busy machines, tests may take longer than
-                ;; the default of four seconds.
-                (setenv "CK_DEFAULT_TIMEOUT" "20")
-
-                ;; Don't fail due to missing '/etc/machine-id'.
-                (setenv "DBUS_FATAL_WARNINGS" "0")
-                (zero? (system (string-append xorg-server "/bin/Xvfb "
-                                              display " &")))))))))
-    (native-inputs
-     (list pkg-config
-           check
-           gettext-minimal
-           `(,glib "bin")
-           xorg-server-for-tests))
-    ;; Listed in 'Requires.private' of 'girara.pc'.
-    (propagated-inputs (list gtk+ json-glib))
     (build-system meson-build-system)
+    (native-inputs (list pkg-config))
+    (inputs (list glib))
     (home-page "https://pwmt.org/projects/girara/")
     (synopsis "Library for minimalistic gtk+3 user interfaces")
     (description "Girara is a library that implements a user interface that

gnu/packages/guile-xyz.scm

@@ -918,7 +918,7 @@ generate API documentation for GNU Guile projects.")
 (define-public guile-dotenv
   (package
    (name "guile-dotenv")
-   (version "0.2.1")
+   (version "0.3.1")
     (source
      (origin
        (method git-fetch)
@@ -927,7 +927,7 @@ generate API documentation for GNU Guile projects.")
              (commit version)))
        (file-name (git-file-name name version))
        (sha256
-        (base32 "1zgc9xwpz6w64rbndvl8c73lsx935byin921209acyw54j52g706"))))
+        (base32 "0j2m9nnjp7096gdy2b038p7wrx93hgw6i6rfy4gh9hkvk4q43b1m"))))
    (build-system gnu-build-system)
    (arguments
     (list
@@ -948,7 +948,6 @@ generate API documentation for GNU Guile projects.")
           pkg-config
           texinfo))
    (inputs (list guile-3.0))
-   (propagated-inputs (list nyacc))
    (synopsis "Read environment variables specifications from @code{.env} files")
    (description "This package provides a simple Guile interface to @code{.env}
 (or dotenv) files.  It implements parsing of files and setting environment
@@ -990,8 +989,7 @@ variables from them.")
                                              (assoc-ref inputs input)
                                              path))
                                           (list "guile-config"
-                                                "guile-dotenv"
+                                                "guile-dotenv"))))))
-                                                "nyacc"))))))
                       (bin (string-append (ungexp output) "/bin/")))
                  (wrap-program (string-append bin "dotenv")
                    (dep-path "GUILE_LOAD_PATH" site)
@@ -5789,6 +5787,43 @@ reading and writing PNG data, as well as some graphic primitives and basic image
 processing filters.")
     (license license:gpl3+)))
 
+(define-public guile-pnm
+  (package
+    (name "guile-pnm")
+    (version "0.2.0")
+    (source
+     (origin
+       (method git-fetch)
+       (uri (git-reference
+             (url "https://github.com/artyom-poptsov/guile-pnm")
+             (commit (string-append "v" version))))
+       (file-name (git-file-name name version))
+       (sha256
+        (base32 "06kgp1gh8hdj1j6w7i981prx93wfjpayrnjlydlzs7l5j04l4m3a"))))
+    (build-system gnu-build-system)
+    (arguments
+     (list
+      #:make-flags
+      #~(list "GUILE_AUTO_COMPILE=0"))) ;to prevent guild warnings
+    (native-inputs (list autoconf
+                         automake
+                         pkg-config
+                         texinfo
+                         ;; needed when cross-compiling.
+                         guile-3.0
+                         guile-lib
+                         guile-smc))
+    (inputs (list guile-3.0 guile-lib))
+    (propagated-inputs (list guile-smc))
+    (home-page "https://github.com/artyom-poptsov/guile-pnm")
+    (synopsis "NetBPM (PNM) library for GNU Guile")
+    (description
+     "@code{guile-pnm} is a GNU Guile library for working with the
+@url{https://en.wikipedia.org/wiki/Netpbm, NetPBM} format (also known as PNM),
+including portable bitmap (PBM), portable graymap (PGM) and portable
+pixel (PPM) variants.")
+    (license license:gpl3+)))
+
 (define-public guile-cv
   (package
     (name "guile-cv")
@@ -7592,7 +7627,7 @@ with a FSM is being built (for example, from a Makefile.)")
 (define-public guile-ini
   (package
     (name "guile-ini")
-    (version "0.5.6")
+    (version "1.0.0")
     (source (origin
               (method git-fetch)
               (uri (git-reference
@@ -7601,7 +7636,7 @@ with a FSM is being built (for example, from a Makefile.)")
               (file-name (string-append name "-" version))
               (sha256
                (base32
-                "0mz7mpcf6q1z9j9ydz1ngr4hglci3ghmharv1isx9wgby3l2dcf5"))))
+                "12mfch7dznx67r5zw88pp4ma3pw6akif7kdr0kak1gvawgfy277y"))))
     (build-system gnu-build-system)
     (arguments
      `(#:make-flags '("GUILE_AUTO_COMPILE=0") ;to prevent guild warnings
@@ -7656,11 +7691,11 @@ is an attempt to combine both into something useful.")
       (license license:asl2.0))))
 
 (define-public guile-knots
-  (let ((commit "cb5ec50b341f603e9d129152b45e47cf008ea126")
+  (let ((commit "f767eca066495e6582e89ba1b91907c0c5657878")
-        (revision "31"))
+        (revision "34"))
     (package
     (name "guile-knots")
-    (version (git-version "0" revision commit))
+    (version (git-version "0.1" revision commit))
     (source (origin
               (method git-fetch)
               (uri (git-reference
@@ -7668,7 +7703,7 @@ is an attempt to combine both into something useful.")
                     (commit commit)))
               (sha256
                (base32
-                "08gcbyw7kvhk568a30kimhn37m9mygpxhswb294n1141ddmhjchh"))
+                "18fqmpyrrxy8phxxm5b7d1qhhvc3rsrs243xiinkj2hn2ca1cqi8"))
               (file-name (git-file-name name version))))
     (build-system gnu-build-system)
     (arguments
@@ -7903,14 +7938,16 @@ This module implements this interface by use of Guile's dynamic FFI.")
 (define-public guile-bstructs
   (package
     (name "guile-bstructs")
-    (version "0.1.0")
+    (version "0.2.0")
     (source
-     (origin
+       (origin
-       (method url-fetch)
+         (method git-fetch)
-       (uri (string-append "https://files.dthompson.us/releases"
+         (uri (git-reference
-                           "/guile-bstructs/guile-bstructs-" version ".tar.gz"))
+               (url "https://git.dthompson.us/guile-bstructs.git")
-       (sha256
+               (commit (string-append "v" version))))
-        (base32 "0f847aiyzhrlvd2jmckyqrkrvi7i9mg8rmyhbh7fs1vzykcf67wb"))))
+         (file-name (git-file-name name version))
+         (sha256
+          (base32 "18dwhcsbcjix61hy32ckjyvgmg1r9smq2krp2m1yc6sinlszh0f2"))))
     (build-system gnu-build-system)
     (native-inputs (list autoconf automake guile-3.0 pkg-config texinfo))
     (inputs (list guile-3.0))

gnu/packages/guile.scm

@@ -856,17 +856,17 @@ Guile's foreign function interface.")
 (define-public guile-bytestructures
   (package
     (name "guile-bytestructures")
-    (version "1.0.10")
+    (version "2.0.2")
     (home-page "https://github.com/TaylanUB/scheme-bytestructures")
     (source (origin
               (method git-fetch)
               (uri (git-reference
                     (url home-page)
-                    (commit version)))
+                    (commit (string-append "v" version))))
               (file-name (git-file-name name version))
               (sha256
                (base32
-                "14k50jln32kkxv41hvsdgjkkfj6xlv06vc1caz01qkgk1fzh72nk"))))
+                "1dyhf39s16q3fvps0mfb65xrlcb8rk8m5kc82ngkwhzmf1svalpc"))))
     (build-system gnu-build-system)
     (arguments
      `(#:make-flags '("GUILE_AUTO_COMPILE=0")     ;to prevent guild warnings
@@ -900,7 +900,7 @@ type system, elevating types to first-class status.")
 (define-public guile-git
   (package
     (name "guile-git")
-    (version "0.10.0")
+    (version "0.11.0")
     (home-page "https://gitlab.com/guile-git/guile-git.git")
     (source (origin
               (method git-fetch)
@@ -910,7 +910,7 @@ type system, elevating types to first-class status.")
               (file-name (git-file-name name version))
               (sha256
                (base32
-                "01scznpg7356ygdlgn1f2892bwg6fsvp37hbmsk4gsg0g49aj4la"))))
+                "1yjyil6z4k80pjdps8v6h6lxikwxmjxvrslf2jrmq2rrfnajschz"))))
     (build-system gnu-build-system)
     (arguments
      `(#:make-flags '("GUILE_AUTO_COMPILE=0")       ; to prevent guild warnings

gnu/packages/hardware.scm

@@ -112,6 +112,7 @@
   #:use-module (guix build-system cmake)
   #:use-module (guix build-system glib-or-gtk)
   #:use-module (guix build-system gnu)
+  #:use-module (guix build-system go)
   #:use-module (guix build-system guile)
   #:use-module (guix build-system meson)
   #:use-module (guix build-system perl)
@@ -310,6 +311,38 @@ sharing.")
 (define-deprecated-package barrier
   deskflow)
 
+(define-public hd-idle
+  (package
+    (name "hd-idle")
+    (version "1.22")
+    (source
+     (origin
+       (method git-fetch)
+       (uri
+        (git-reference
+          (url "https://github.com/adelolmo/hd-idle")
+          (commit (string-append "v" version))))
+       (file-name (git-file-name name version))
+       (sha256
+        (base32 "12nckzp00b3y91igp8jzlf6as353la6ar8gp6b646kn9gi2hrla3"))
+       (snippet
+        #~(begin
+            (use-modules (guix build utils))
+            (delete-file-recursively "vendor")))))
+    (build-system go-build-system)
+    (arguments
+     (list #:import-path "github.com/adelolmo/hd-idle"
+           #:install-source? #f))
+    (inputs
+     (list go-github-com-benmcclelland-sgio))
+    (home-page "https://github.com/adelolmo/hd-idle")
+    (synopsis "Spin down idle hard disks")
+    (description "@command{hd-idle} is a utility program for spinning down
+external disks after a period of idle time.  Since most USB hard drives do not
+support setting the idle timer via @command{hdparm}, hd-idle can be used as a
+workaround.")
+    (license license:gpl3+)))
+
 (define-public hw-probe
   (package
     (name "hw-probe")

gnu/packages/ibus.scm

@@ -518,6 +518,8 @@ Japanese language input in most graphical applications.")
     (arguments
      (list
       #:tests? #f ;no tests
+      #:configure-flags
+      #~(list "CFLAGS=-Wno-error=incompatible-pointer-types")
       #:phases
       #~(modify-phases %standard-phases
           (add-after 'unpack 'patch-skk-jisyo
@@ -1133,6 +1135,7 @@ IBus-Table on IBus framework:
                                (string-append out "/libexec/ibus-setup-stt")))))))))
     (inputs
      (list bash-minimal
+           gst-plugins-good ; for pulsesrc
            gst-vosk
            gstreamer
            gtk

gnu/packages/image-viewers.scm

@@ -96,6 +96,7 @@
   #:use-module (gnu packages golang-xyz)
   #:use-module (gnu packages gtk)
   #:use-module (gnu packages graphics)
+  #:use-module (gnu packages haskell-xyz)
   #:use-module (gnu packages image)
   #:use-module (gnu packages image-processing)
   #:use-module (gnu packages imagemagick)
@@ -116,6 +117,7 @@
   #:use-module (gnu packages python-web)
   #:use-module (gnu packages python-xyz)
   #:use-module (gnu packages qt)
+  #:use-module (gnu packages sqlite)
   #:use-module (gnu packages suckless)
   #:use-module (gnu packages stb)
   #:use-module (gnu packages terminals)
@@ -667,7 +669,7 @@ and WebP.")
 (define-public mcomix
   (package
     (name "mcomix")
-    (version "3.1.0")
+    (version "3.1.1")
     (source
      (origin
        (method url-fetch)
@@ -675,7 +677,7 @@ and WebP.")
                            "mcomix-" version ".tar.gz"))
        (sha256
         (base32
-         "09y4nhlcqvvhz0wscx4zpqxmyhiwh8wrjnhk52awxhzvgyx6wa7r"))))
+         "1y6fps1fbzjc4sdm381432zvrq97iadbz4yyxxsfnzf0ggnsl2m1"))))
     (build-system pyproject-build-system)
     (arguments
      (list
@@ -718,8 +720,14 @@ and WebP.")
                (wrap-program prog
                  `("GI_TYPELIB_PATH" = (,(getenv "GI_TYPELIB_PATH"))))))))))
     (native-inputs (list python-setuptools))
-    (inputs
+    (inputs (list bash-minimal
-     (list bash-minimal p7zip python python-pillow python-pygobject python-pycairo gtk+))
+                  gobject-introspection
+                  gtk+
+                  p7zip
+                  python
+                  python-pillow
+                  python-pycairo
+                  python-pygobject))
     (home-page "https://sourceforge.net/p/mcomix/wiki/Home/")
     (synopsis "Image viewer for comics")
     (description "MComix is a customizable image viewer that specializes as
@@ -1051,6 +1059,67 @@ synchronization of multiple instances.")
     (home-page "https://nomacs.org/")
     (license license:gpl3+)))
 
+(define-public timg
+  (package
+    (name "timg")
+    (version "1.6.3")
+    (source
+     (origin
+       (method git-fetch)
+       (uri (git-reference
+             (url "https://github.com/hzeller/timg")
+             (commit (string-append "v" version))))
+       (file-name (git-file-name name version))
+       (sha256
+        (base32 "0xr3g6my2n9ry5mqiw1qvf7m0lpmj20h2xsnh75653ha83wqxmhm"))
+       (modules '((guix build utils)))
+       (snippet
+        ;; Remove bundled sources
+        #~(begin
+            (delete-file-recursively "third_party") #t))))
+    (build-system cmake-build-system)
+    (arguments
+     (list
+      #:configure-flags
+      #~'("-Wno-dev" "-DWITH_OPENSLIDE_SUPPORT=ON")
+      #:phases
+      #~(modify-phases %standard-phases
+          (add-before 'configure 'fix-stb-path
+            ;; This package expects stb-image to be at stb/stb_image.h, but
+            ;; Guix puts it at stb_image.h instead
+            (lambda _
+              (substitute* "src/CMakeLists.txt"
+                (("stb/stb")
+                 "stb"))
+              (substitute* "src/stb-image-source.cc"
+                (("#include \"stb/stb_image.h\"")
+                 "#include \"stb_image.h\"")))))
+      #:tests? #f)) ;No tests
+    (inputs (list cairo
+                  ffmpeg
+                  graphicsmagick
+                  libdeflate
+                  libdicom
+                  libexif
+                  libjpeg-turbo
+                  librsvg
+                  libsixel
+                  libxml2
+                  openjpeg
+                  openslide
+                  poppler
+                  qoi
+                  sqlite
+                  stb-image))
+    (native-inputs (list git pandoc pkg-config))
+    (home-page "https://timg.sh/")
+    (synopsis "Terminal image and video viewer")
+    (description
+     "This package provides a user-friendly terminal image viewer that uses
+graphic capabilities of terminals (Sixel, Kitty or iterm2), or 24-Bit color
+capabilities and unicode character blocks if these are not available.")
+    (license license:gpl2)))
+
 (define-public xzgv
   (package
     (name "xzgv")